BLASTX nr result
ID: Zingiber24_contig00034734
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00034734
(302 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006854186.1| hypothetical protein AMTR_s00048p00204000 [A... 193 2e-47
ref|XP_004245920.1| PREDICTED: replication protein A 70 kDa DNA-... 184 1e-44
ref|XP_006364465.1| PREDICTED: replication protein A 70 kDa DNA-... 182 3e-44
ref|XP_002264009.1| PREDICTED: replication protein A 70 kDa DNA-... 182 4e-44
emb|CAN82475.1| hypothetical protein VITISV_038295 [Vitis vinifera] 182 4e-44
ref|XP_004141065.1| PREDICTED: replication protein A 70 kDa DNA-... 179 4e-43
ref|XP_004157962.1| PREDICTED: replication protein A 70 kDa DNA-... 177 1e-42
ref|XP_006432556.1| hypothetical protein CICLE_v10000254mg [Citr... 175 5e-42
ref|XP_004170646.1| PREDICTED: replication protein A 70 kDa DNA-... 174 8e-42
ref|XP_004146122.1| PREDICTED: replication protein A 70 kDa DNA-... 174 8e-42
ref|XP_002278273.1| PREDICTED: replication protein A 70 kDa DNA-... 173 2e-41
ref|XP_002514062.1| replication factor A 1, rfa1, putative [Rici... 172 4e-41
ref|XP_006338140.1| PREDICTED: replication protein A 70 kDa DNA-... 171 7e-41
gb|EMJ12292.1| hypothetical protein PRUPE_ppa001396mg [Prunus pe... 171 9e-41
ref|XP_004512401.1| PREDICTED: replication protein A 70 kDa DNA-... 171 1e-40
ref|XP_004239312.1| PREDICTED: replication protein A 70 kDa DNA-... 170 2e-40
ref|XP_006372003.1| hypothetical protein POPTR_0018s07150g [Popu... 168 6e-40
ref|XP_002304377.2| hypothetical protein POPTR_0003s10170g [Popu... 168 8e-40
ref|XP_006849629.1| hypothetical protein AMTR_s00024p00218120 [A... 168 8e-40
gb|EOY30309.1| Replication protein A 1A [Theobroma cacao] 168 8e-40
>ref|XP_006854186.1| hypothetical protein AMTR_s00048p00204000 [Amborella trichopoda]
gi|548857855|gb|ERN15653.1| hypothetical protein
AMTR_s00048p00204000 [Amborella trichopoda]
Length = 798
Score = 193 bits (491), Expect = 2e-47
Identities = 82/100 (82%), Positives = 94/100 (94%)
Frame = +1
Query: 1 VKATVTFVKVDNFCYTACPLMVGDRSCNKKVNNNGNGTWHCDRCDQDFPECDYRYLLQFQ 180
VKA ++F+KVDNFCYTACPLMVGDR CNKKVNNNG+GTWHCDRC+Q FPECDYRYLLQ Q
Sbjct: 443 VKAIISFIKVDNFCYTACPLMVGDRQCNKKVNNNGDGTWHCDRCEQTFPECDYRYLLQAQ 502
Query: 181 IQDHTGMTWVTAFQECGEEILGVAAKELYLLKYEEQDDMK 300
IQDHTG+TWVTAFQE GEE++G++AK+LY LKYEEQDD+K
Sbjct: 503 IQDHTGLTWVTAFQESGEELMGISAKDLYFLKYEEQDDVK 542
>ref|XP_004245920.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like
[Solanum lycopersicum]
Length = 899
Score = 184 bits (466), Expect = 1e-44
Identities = 77/98 (78%), Positives = 88/98 (89%)
Frame = +1
Query: 1 VKATVTFVKVDNFCYTACPLMVGDRSCNKKVNNNGNGTWHCDRCDQDFPECDYRYLLQFQ 180
+ ATVTF+KVDNFCYTACPLM+GDR CNKKV NNG+G W CDRCDQ EC+YRY+LQFQ
Sbjct: 544 ISATVTFIKVDNFCYTACPLMIGDRQCNKKVTNNGDGKWRCDRCDQTVDECEYRYILQFQ 603
Query: 181 IQDHTGMTWVTAFQECGEEILGVAAKELYLLKYEEQDD 294
IQDHTG+TWVTAFQECG++I+G +AKELY LKYEEQDD
Sbjct: 604 IQDHTGLTWVTAFQECGDQIMGASAKELYFLKYEEQDD 641
>ref|XP_006364465.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit C-like
[Solanum tuberosum]
Length = 905
Score = 182 bits (463), Expect = 3e-44
Identities = 77/98 (78%), Positives = 89/98 (90%)
Frame = +1
Query: 1 VKATVTFVKVDNFCYTACPLMVGDRSCNKKVNNNGNGTWHCDRCDQDFPECDYRYLLQFQ 180
V A+VTF+KVDNFCYTACPLM+GDR CNKKV NNG+G W CDRCDQ EC+YRY+L+FQ
Sbjct: 544 VSASVTFIKVDNFCYTACPLMIGDRQCNKKVTNNGDGKWRCDRCDQTVDECEYRYILRFQ 603
Query: 181 IQDHTGMTWVTAFQECGEEILGVAAKELYLLKYEEQDD 294
IQDHTG+TWVTAFQECG++I+GV+AKELY LKYEEQDD
Sbjct: 604 IQDHTGLTWVTAFQECGDQIMGVSAKELYFLKYEEQDD 641
>ref|XP_002264009.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like
[Vitis vinifera]
Length = 882
Score = 182 bits (462), Expect = 4e-44
Identities = 77/100 (77%), Positives = 89/100 (89%)
Frame = +1
Query: 1 VKATVTFVKVDNFCYTACPLMVGDRSCNKKVNNNGNGTWHCDRCDQDFPECDYRYLLQFQ 180
V ATV+F+KVDNFCYTACP+M+GDR CNKKV NNG+G W C+RCDQ +CDYRY+LQFQ
Sbjct: 557 VCATVSFIKVDNFCYTACPIMIGDRQCNKKVTNNGDGKWRCERCDQSVDDCDYRYILQFQ 616
Query: 181 IQDHTGMTWVTAFQECGEEILGVAAKELYLLKYEEQDDMK 300
IQDHTG+TWVTAFQECGEEI+G++AK LY LKYEEQDD K
Sbjct: 617 IQDHTGLTWVTAFQECGEEIMGISAKNLYYLKYEEQDDEK 656
>emb|CAN82475.1| hypothetical protein VITISV_038295 [Vitis vinifera]
Length = 882
Score = 182 bits (462), Expect = 4e-44
Identities = 77/100 (77%), Positives = 89/100 (89%)
Frame = +1
Query: 1 VKATVTFVKVDNFCYTACPLMVGDRSCNKKVNNNGNGTWHCDRCDQDFPECDYRYLLQFQ 180
V ATV+F+KVDNFCYTACP+M+GDR CNKKV NNG+G W C+RCDQ +CDYRY+LQFQ
Sbjct: 557 VCATVSFIKVDNFCYTACPIMIGDRQCNKKVTNNGDGKWRCERCDQSVDDCDYRYILQFQ 616
Query: 181 IQDHTGMTWVTAFQECGEEILGVAAKELYLLKYEEQDDMK 300
IQDHTG+TWVTAFQECGEEI+G++AK LY LKYEEQDD K
Sbjct: 617 IQDHTGLTWVTAFQECGEEIMGISAKNLYYLKYEEQDDEK 656
>ref|XP_004141065.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like
[Cucumis sativus]
Length = 694
Score = 179 bits (453), Expect = 4e-43
Identities = 77/100 (77%), Positives = 90/100 (90%)
Frame = +1
Query: 1 VKATVTFVKVDNFCYTACPLMVGDRSCNKKVNNNGNGTWHCDRCDQDFPECDYRYLLQFQ 180
VKAT++F+K D+FCYTACPLM+GDR CNKKV +GN W CDRC+Q+F +CDYRYLLQ Q
Sbjct: 466 VKATISFIKTDSFCYTACPLMIGDRQCNKKVTRSGNSKWVCDRCNQEFEDCDYRYLLQAQ 525
Query: 181 IQDHTGMTWVTAFQECGEEILGVAAKELYLLKYEEQDDMK 300
IQDHTG+TWVTAFQE GEEILGV+AKELY+LKYEEQDD+K
Sbjct: 526 IQDHTGLTWVTAFQETGEEILGVSAKELYMLKYEEQDDVK 565
>ref|XP_004157962.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like
[Cucumis sativus]
Length = 623
Score = 177 bits (449), Expect = 1e-42
Identities = 76/100 (76%), Positives = 89/100 (89%)
Frame = +1
Query: 1 VKATVTFVKVDNFCYTACPLMVGDRSCNKKVNNNGNGTWHCDRCDQDFPECDYRYLLQFQ 180
VKAT++F+K D+FCYTACPLM+GDR CNKKV +GN W CDRC+Q+F +CDYRYLLQ Q
Sbjct: 466 VKATISFIKTDSFCYTACPLMIGDRQCNKKVTRSGNSKWVCDRCNQEFEDCDYRYLLQAQ 525
Query: 181 IQDHTGMTWVTAFQECGEEILGVAAKELYLLKYEEQDDMK 300
IQDHTG+TWVTAFQE GEEILGV+ KELY+LKYEEQDD+K
Sbjct: 526 IQDHTGLTWVTAFQETGEEILGVSGKELYMLKYEEQDDVK 565
>ref|XP_006432556.1| hypothetical protein CICLE_v10000254mg [Citrus clementina]
gi|568834454|ref|XP_006471343.1| PREDICTED: replication
protein A 70 kDa DNA-binding subunit C-like [Citrus
sinensis] gi|557534678|gb|ESR45796.1| hypothetical
protein CICLE_v10000254mg [Citrus clementina]
Length = 858
Score = 175 bits (444), Expect = 5e-42
Identities = 73/100 (73%), Positives = 87/100 (87%)
Frame = +1
Query: 1 VKATVTFVKVDNFCYTACPLMVGDRSCNKKVNNNGNGTWHCDRCDQDFPECDYRYLLQFQ 180
V AT+ ++K DNFCYTACP+M+GDR CNKKV NNG+G WHCDRCDQ ECDYRY+LQFQ
Sbjct: 530 VSATIVYIKCDNFCYTACPIMIGDRPCNKKVMNNGDGRWHCDRCDQSVVECDYRYILQFQ 589
Query: 181 IQDHTGMTWVTAFQECGEEILGVAAKELYLLKYEEQDDMK 300
IQDHTG+TWVTAFQEC EEI+G++AK+LY LKY +Q+D K
Sbjct: 590 IQDHTGLTWVTAFQECAEEIMGMSAKDLYSLKYVDQNDEK 629
>ref|XP_004170646.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like,
partial [Cucumis sativus]
Length = 425
Score = 174 bits (442), Expect = 8e-42
Identities = 75/100 (75%), Positives = 86/100 (86%)
Frame = +1
Query: 1 VKATVTFVKVDNFCYTACPLMVGDRSCNKKVNNNGNGTWHCDRCDQDFPECDYRYLLQFQ 180
V ATV+F+KVD+FCYTACP+M+GDR C+KKV NNG+G W CDRCDQ ECDYRY+LQ Q
Sbjct: 117 VSATVSFIKVDSFCYTACPIMIGDRQCSKKVTNNGDGKWRCDRCDQSVDECDYRYILQLQ 176
Query: 181 IQDHTGMTWVTAFQECGEEILGVAAKELYLLKYEEQDDMK 300
IQDHTG+TWVTAFQE GEEI+G+ AK LY LKYEEQDD K
Sbjct: 177 IQDHTGLTWVTAFQEGGEEIMGIPAKRLYYLKYEEQDDEK 216
>ref|XP_004146122.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like
[Cucumis sativus]
Length = 861
Score = 174 bits (442), Expect = 8e-42
Identities = 75/100 (75%), Positives = 86/100 (86%)
Frame = +1
Query: 1 VKATVTFVKVDNFCYTACPLMVGDRSCNKKVNNNGNGTWHCDRCDQDFPECDYRYLLQFQ 180
V ATV+F+KVD+FCYTACP+M+GDR C+KKV NNG+G W CDRCDQ ECDYRY+LQ Q
Sbjct: 553 VSATVSFIKVDSFCYTACPIMIGDRQCSKKVTNNGDGKWRCDRCDQSVDECDYRYILQLQ 612
Query: 181 IQDHTGMTWVTAFQECGEEILGVAAKELYLLKYEEQDDMK 300
IQDHTG+TWVTAFQE GEEI+G+ AK LY LKYEEQDD K
Sbjct: 613 IQDHTGLTWVTAFQEGGEEIMGIPAKRLYYLKYEEQDDEK 652
>ref|XP_002278273.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit [Vitis
vinifera] gi|297738589|emb|CBI27834.3| unnamed protein
product [Vitis vinifera]
Length = 622
Score = 173 bits (438), Expect = 2e-41
Identities = 73/100 (73%), Positives = 86/100 (86%)
Frame = +1
Query: 1 VKATVTFVKVDNFCYTACPLMVGDRSCNKKVNNNGNGTWHCDRCDQDFPECDYRYLLQFQ 180
VKAT++F+K D FCY ACPLM+GDR CNKKV +GN W CDRC+Q+F +CDYRYLLQ Q
Sbjct: 466 VKATISFIKTDTFCYAACPLMIGDRQCNKKVTRSGNTRWQCDRCNQEFEDCDYRYLLQAQ 525
Query: 181 IQDHTGMTWVTAFQECGEEILGVAAKELYLLKYEEQDDMK 300
+QDHTG+TWVTAFQE GEEILG +AKELYLLKYEE+DD +
Sbjct: 526 VQDHTGLTWVTAFQEAGEEILGCSAKELYLLKYEEEDDFR 565
>ref|XP_002514062.1| replication factor A 1, rfa1, putative [Ricinus communis]
gi|223546518|gb|EEF48016.1| replication factor A 1,
rfa1, putative [Ricinus communis]
Length = 670
Score = 172 bits (436), Expect = 4e-41
Identities = 76/100 (76%), Positives = 84/100 (84%)
Frame = +1
Query: 1 VKATVTFVKVDNFCYTACPLMVGDRSCNKKVNNNGNGTWHCDRCDQDFPECDYRYLLQFQ 180
V A +TFVK D FCYTACPLM+GDR CNKKV ++GN W CDRC+Q+F ECDYRYLLQ Q
Sbjct: 512 VSARITFVKTDTFCYTACPLMIGDRQCNKKVTSSGNSRWQCDRCNQEFDECDYRYLLQVQ 571
Query: 181 IQDHTGMTWVTAFQECGEEILGVAAKELYLLKYEEQDDMK 300
IQDHTG+TWVTAFQE GEEILG+ AKELY LKYE QDD K
Sbjct: 572 IQDHTGLTWVTAFQESGEEILGLPAKELYQLKYEMQDDTK 611
>ref|XP_006338140.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit A-like
[Solanum tuberosum]
Length = 653
Score = 171 bits (434), Expect = 7e-41
Identities = 73/100 (73%), Positives = 84/100 (84%)
Frame = +1
Query: 1 VKATVTFVKVDNFCYTACPLMVGDRSCNKKVNNNGNGTWHCDRCDQDFPECDYRYLLQFQ 180
VKAT+TF+K D FCYTACPLM+GDR CNKKV +GN W CDRC+Q+F ECDYRYLLQ Q
Sbjct: 482 VKATITFIKTDTFCYTACPLMIGDRQCNKKVTRSGNSRWQCDRCNQEFEECDYRYLLQAQ 541
Query: 181 IQDHTGMTWVTAFQECGEEILGVAAKELYLLKYEEQDDMK 300
IQDH+G+TWVT FQE GEEILG AKELY++KYEE DD +
Sbjct: 542 IQDHSGLTWVTTFQESGEEILGCPAKELYMMKYEEADDTR 581
>gb|EMJ12292.1| hypothetical protein PRUPE_ppa001396mg [Prunus persica]
Length = 838
Score = 171 bits (433), Expect = 9e-41
Identities = 75/100 (75%), Positives = 84/100 (84%)
Frame = +1
Query: 1 VKATVTFVKVDNFCYTACPLMVGDRSCNKKVNNNGNGTWHCDRCDQDFPECDYRYLLQFQ 180
V TV+F+KVD+FCY+ACPLM GDR C+KKV NNG+G W CDRCDQ ECDYRYLLQ Q
Sbjct: 514 VSGTVSFIKVDSFCYSACPLMNGDRQCSKKVTNNGDGKWRCDRCDQSMEECDYRYLLQLQ 573
Query: 181 IQDHTGMTWVTAFQECGEEILGVAAKELYLLKYEEQDDMK 300
IQDHTG TWVTAFQE GEEI+G+ AK+LY LKYEEQDD K
Sbjct: 574 IQDHTGTTWVTAFQEGGEEIMGIPAKDLYFLKYEEQDDEK 613
>ref|XP_004512401.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like
[Cicer arietinum]
Length = 917
Score = 171 bits (432), Expect = 1e-40
Identities = 74/98 (75%), Positives = 83/98 (84%)
Frame = +1
Query: 1 VKATVTFVKVDNFCYTACPLMVGDRSCNKKVNNNGNGTWHCDRCDQDFPECDYRYLLQFQ 180
V A+V+FVKVDNFCYTACP+M+GDR CNKKV NNG+G W CDRCDQ CDYRY+LQ Q
Sbjct: 560 VCASVSFVKVDNFCYTACPIMIGDRQCNKKVTNNGDGKWRCDRCDQSVDACDYRYILQLQ 619
Query: 181 IQDHTGMTWVTAFQECGEEILGVAAKELYLLKYEEQDD 294
IQDHTG+TW TAFQE GEEILG+ AK+LY LKYEE DD
Sbjct: 620 IQDHTGVTWATAFQEGGEEILGIPAKDLYFLKYEEHDD 657
>ref|XP_004239312.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like
[Solanum lycopersicum]
Length = 636
Score = 170 bits (430), Expect = 2e-40
Identities = 73/100 (73%), Positives = 83/100 (83%)
Frame = +1
Query: 1 VKATVTFVKVDNFCYTACPLMVGDRSCNKKVNNNGNGTWHCDRCDQDFPECDYRYLLQFQ 180
VKAT+TF+K D FCYTACPLM+GDR CNKKV + N W CDRC+Q+F ECDYRYLLQ Q
Sbjct: 472 VKATITFIKTDTFCYTACPLMIGDRQCNKKVTRSENSKWQCDRCNQEFEECDYRYLLQAQ 531
Query: 181 IQDHTGMTWVTAFQECGEEILGVAAKELYLLKYEEQDDMK 300
IQDHTG+TWVT FQE GEEILG AKELY++KYEE DD +
Sbjct: 532 IQDHTGLTWVTTFQESGEEILGCPAKELYMMKYEEADDTR 571
>ref|XP_006372003.1| hypothetical protein POPTR_0018s07150g [Populus trichocarpa]
gi|550318250|gb|ERP49800.1| hypothetical protein
POPTR_0018s07150g [Populus trichocarpa]
Length = 670
Score = 168 bits (426), Expect = 6e-40
Identities = 72/100 (72%), Positives = 83/100 (83%)
Frame = +1
Query: 1 VKATVTFVKVDNFCYTACPLMVGDRSCNKKVNNNGNGTWHCDRCDQDFPECDYRYLLQFQ 180
V+A+V+F+K D FCYTACPLM+GDR CNKKV +GN W CDRC+Q+F +CDYRYLLQ Q
Sbjct: 512 VRASVSFIKTDTFCYTACPLMIGDRQCNKKVTRSGNSRWQCDRCNQEFDDCDYRYLLQVQ 571
Query: 181 IQDHTGMTWVTAFQECGEEILGVAAKELYLLKYEEQDDMK 300
IQDHTG+TW TAFQE GEEILG AKELYLLKYE DD +
Sbjct: 572 IQDHTGLTWATAFQESGEEILGYPAKELYLLKYESNDDTR 611
>ref|XP_002304377.2| hypothetical protein POPTR_0003s10170g [Populus trichocarpa]
gi|550342884|gb|EEE79356.2| hypothetical protein
POPTR_0003s10170g [Populus trichocarpa]
Length = 854
Score = 168 bits (425), Expect = 8e-40
Identities = 70/98 (71%), Positives = 86/98 (87%)
Frame = +1
Query: 1 VKATVTFVKVDNFCYTACPLMVGDRSCNKKVNNNGNGTWHCDRCDQDFPECDYRYLLQFQ 180
V ATV +VK DNFCYTACP+M G+R CNKKV NNG+G W C++CDQ ECDYRY+LQFQ
Sbjct: 545 VPATVIYVKSDNFCYTACPIMSGERPCNKKVTNNGDGKWRCEKCDQSVDECDYRYILQFQ 604
Query: 181 IQDHTGMTWVTAFQECGEEILGVAAKELYLLKYEEQDD 294
IQDHTG++WVTAFQECGEEI+G++AK+L+ LK+E+QDD
Sbjct: 605 IQDHTGISWVTAFQECGEEIMGISAKDLHYLKHEQQDD 642
>ref|XP_006849629.1| hypothetical protein AMTR_s00024p00218120 [Amborella trichopoda]
gi|548853204|gb|ERN11210.1| hypothetical protein
AMTR_s00024p00218120 [Amborella trichopoda]
Length = 633
Score = 168 bits (425), Expect = 8e-40
Identities = 71/100 (71%), Positives = 83/100 (83%)
Frame = +1
Query: 1 VKATVTFVKVDNFCYTACPLMVGDRSCNKKVNNNGNGTWHCDRCDQDFPECDYRYLLQFQ 180
VKA VTF+K D+FCYTACP++VGDR CNKK+ + G WHC+RCDQD +CDYRYLLQ Q
Sbjct: 476 VKANVTFIKTDSFCYTACPVIVGDRQCNKKITRSRGGLWHCERCDQDLEDCDYRYLLQIQ 535
Query: 181 IQDHTGMTWVTAFQECGEEILGVAAKELYLLKYEEQDDMK 300
IQDHTG+TWVTAFQE GEEI+G AKELY LKYEE D+ +
Sbjct: 536 IQDHTGLTWVTAFQEAGEEIMGFPAKELYFLKYEEGDEQR 575
>gb|EOY30309.1| Replication protein A 1A [Theobroma cacao]
Length = 628
Score = 168 bits (425), Expect = 8e-40
Identities = 74/99 (74%), Positives = 84/99 (84%)
Frame = +1
Query: 4 KATVTFVKVDNFCYTACPLMVGDRSCNKKVNNNGNGTWHCDRCDQDFPECDYRYLLQFQI 183
+ATV F+K DNFCYTACPLM+GDR CNKKV +GN W CDRC+Q+F EC+YRYLLQ QI
Sbjct: 467 RATVVFIKTDNFCYTACPLMIGDRQCNKKVARSGNKRWLCDRCNQEFEECEYRYLLQVQI 526
Query: 184 QDHTGMTWVTAFQECGEEILGVAAKELYLLKYEEQDDMK 300
QDHTG+TWVTAFQE GEEILG +AKELY LKYE QDD +
Sbjct: 527 QDHTGLTWVTAFQESGEEILGCSAKELYSLKYELQDDTR 565