BLASTX nr result
ID: Zingiber24_contig00034671
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00034671
(615 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002305285.2| pentatricopeptide repeat-containing family p... 107 3e-21
ref|XP_004156879.1| PREDICTED: pentatricopeptide repeat-containi... 104 2e-20
ref|XP_004152353.1| PREDICTED: pentatricopeptide repeat-containi... 104 2e-20
ref|XP_002267278.1| PREDICTED: pentatricopeptide repeat-containi... 104 2e-20
emb|CBI36294.3| unnamed protein product [Vitis vinifera] 103 3e-20
ref|XP_002530894.1| pentatricopeptide repeat-containing protein,... 103 4e-20
ref|XP_006427239.1| hypothetical protein CICLE_v100269871mg, par... 103 5e-20
gb|EOY26490.1| Pentatricopeptide repeat (PPR) superfamily protei... 102 7e-20
ref|XP_006465352.1| PREDICTED: pentatricopeptide repeat-containi... 101 1e-19
ref|XP_004503476.1| PREDICTED: pentatricopeptide repeat-containi... 100 2e-19
gb|EXB67320.1| hypothetical protein L484_025802 [Morus notabilis] 100 3e-19
ref|XP_003630734.1| Pentatricopeptide repeat-containing protein ... 99 9e-19
gb|EEC84482.1| hypothetical protein OsI_31142 [Oryza sativa Indi... 98 2e-18
gb|EEE69598.1| hypothetical protein OsJ_29150 [Oryza sativa Japo... 98 2e-18
ref|XP_006364201.1| PREDICTED: pentatricopeptide repeat-containi... 97 5e-18
ref|XP_004235996.1| PREDICTED: pentatricopeptide repeat-containi... 96 8e-18
ref|XP_003538658.1| PREDICTED: pentatricopeptide repeat-containi... 93 7e-17
ref|XP_002462300.1| hypothetical protein SORBIDRAFT_02g023500 [S... 93 7e-17
ref|NP_175673.1| pentatricopeptide repeat-containing protein [Ar... 92 9e-17
ref|XP_003516732.1| PREDICTED: pentatricopeptide repeat-containi... 92 9e-17
>ref|XP_002305285.2| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|550340729|gb|EEE85796.2|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 523
Score = 107 bits (266), Expect = 3e-21
Identities = 50/83 (60%), Positives = 64/83 (77%), Gaps = 1/83 (1%)
Frame = +1
Query: 1 HGLCKKKGKVEEACRFFEKMVDEGIPPYPDTCEILRDKLLQIGLREQVGVLACKMKRSTS 180
HGLCKKKGK+EEACR+FE M+DEGIPPY T E+LR++L+ GL + + +LACKM+R TS
Sbjct: 435 HGLCKKKGKLEEACRYFETMIDEGIPPYASTIEMLRNRLIGFGLLDHIEILACKMERGTS 494
Query: 181 CKIQELSLAMEG-RTKVDSANEK 246
C IQEL+ M G + V S NE+
Sbjct: 495 CSIQELAKEMRGNKACVRSRNEE 517
>ref|XP_004156879.1| PREDICTED: pentatricopeptide repeat-containing protein At1g52640,
mitochondrial-like [Cucumis sativus]
Length = 529
Score = 104 bits (260), Expect = 2e-20
Identities = 49/88 (55%), Positives = 64/88 (72%)
Frame = +1
Query: 1 HGLCKKKGKVEEACRFFEKMVDEGIPPYPDTCEILRDKLLQIGLREQVGVLACKMKRSTS 180
HG CKKK K+EEAC++FE M+DEGIPPY T E+LRD+LL IG ++QV +L KMKRSTS
Sbjct: 438 HGFCKKKWKLEEACKYFEMMIDEGIPPYIATVELLRDRLLGIGFKDQVAILGDKMKRSTS 497
Query: 181 CKIQELSLAMEGRTKVDSANEKKGQPVE 264
C IQEL+ M G + ++ + K + E
Sbjct: 498 CSIQELANLMSGGKRREAQSMLKNEETE 525
>ref|XP_004152353.1| PREDICTED: pentatricopeptide repeat-containing protein At1g52640,
mitochondrial-like [Cucumis sativus]
Length = 529
Score = 104 bits (260), Expect = 2e-20
Identities = 49/88 (55%), Positives = 64/88 (72%)
Frame = +1
Query: 1 HGLCKKKGKVEEACRFFEKMVDEGIPPYPDTCEILRDKLLQIGLREQVGVLACKMKRSTS 180
HG CKKK K+EEAC++FE M+DEGIPPY T E+LRD+LL IG ++QV +L KMKRSTS
Sbjct: 438 HGFCKKKWKLEEACKYFEMMIDEGIPPYIATVELLRDRLLGIGFKDQVAILGDKMKRSTS 497
Query: 181 CKIQELSLAMEGRTKVDSANEKKGQPVE 264
C IQEL+ M G + ++ + K + E
Sbjct: 498 CSIQELANLMSGGKRREAQSMLKNEETE 525
>ref|XP_002267278.1| PREDICTED: pentatricopeptide repeat-containing protein At1g52640,
mitochondrial-like [Vitis vinifera]
Length = 624
Score = 104 bits (260), Expect = 2e-20
Identities = 54/113 (47%), Positives = 74/113 (65%), Gaps = 1/113 (0%)
Frame = +1
Query: 1 HGLCKKKGKVEEACRFFEKMVDEGIPPYPDTCEILRDKLLQIGLREQVGVLACKMKRSTS 180
HG CKKKGK+EEAC++FE M+D+GIPPY T E+LR++++ +G EQ+ VLA KM+RSTS
Sbjct: 437 HGFCKKKGKLEEACKYFEMMIDDGIPPYSCTVELLRNRVIGLGFSEQIDVLAGKMERSTS 496
Query: 181 CKIQELSLAMEG-RTKVDSANEKKGQPVEQRPRQYGSQERVYCTQQSDARNFR 336
C IQELS M G + +E++ P E+R Y E + T+ S R
Sbjct: 497 CVIQELSSVMRGEKASGRLRSEEQNLPSEERGEGY---EYTWLTEGSSLSRMR 546
>emb|CBI36294.3| unnamed protein product [Vitis vinifera]
Length = 517
Score = 103 bits (258), Expect = 3e-20
Identities = 50/95 (52%), Positives = 68/95 (71%), Gaps = 1/95 (1%)
Frame = +1
Query: 1 HGLCKKKGKVEEACRFFEKMVDEGIPPYPDTCEILRDKLLQIGLREQVGVLACKMKRSTS 180
HG CKKKGK+EEAC++FE M+D+GIPPY T E+LR++++ +G EQ+ VLA KM+RSTS
Sbjct: 410 HGFCKKKGKLEEACKYFEMMIDDGIPPYSCTVELLRNRVIGLGFSEQIDVLAGKMERSTS 469
Query: 181 CKIQELSLAMEG-RTKVDSANEKKGQPVEQRPRQY 282
C IQELS M G + +E++ P E+R Y
Sbjct: 470 CVIQELSSVMRGEKASGRLRSEEQNLPSEERGEGY 504
>ref|XP_002530894.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223529547|gb|EEF31500.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 519
Score = 103 bits (257), Expect = 4e-20
Identities = 48/83 (57%), Positives = 66/83 (79%), Gaps = 1/83 (1%)
Frame = +1
Query: 1 HGLCKKKGKVEEACRFFEKMVDEGIPPYPDTCEILRDKLLQIGLREQVGVLACKMKRSTS 180
HGLCKKKGK+EEAC++FE M+DEGIPPY T EILR++L+ +GL + + +LA KM+ ST+
Sbjct: 431 HGLCKKKGKLEEACKYFEMMIDEGIPPYSSTVEILRNRLIGLGLLDYIEILAGKMEHSTA 490
Query: 181 CKIQELSLAME-GRTKVDSANEK 246
C IQEL++AM G+ V S +E+
Sbjct: 491 CSIQELAIAMRGGKVHVRSRSEE 513
>ref|XP_006427239.1| hypothetical protein CICLE_v100269871mg, partial [Citrus
clementina] gi|557529229|gb|ESR40479.1| hypothetical
protein CICLE_v100269871mg, partial [Citrus clementina]
Length = 436
Score = 103 bits (256), Expect = 5e-20
Identities = 47/74 (63%), Positives = 61/74 (82%)
Frame = +1
Query: 1 HGLCKKKGKVEEACRFFEKMVDEGIPPYPDTCEILRDKLLQIGLREQVGVLACKMKRSTS 180
HGLCKKKGK+EEAC++FE MVDEGIPPY T E+LR++L+ +G + + +LA KM+RSTS
Sbjct: 348 HGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDIIEILADKMERSTS 407
Query: 181 CKIQELSLAMEGRT 222
C IQEL+ AM G+T
Sbjct: 408 CTIQELANAMRGKT 421
>gb|EOY26490.1| Pentatricopeptide repeat (PPR) superfamily protein [Theobroma
cacao]
Length = 520
Score = 102 bits (255), Expect = 7e-20
Identities = 46/74 (62%), Positives = 60/74 (81%)
Frame = +1
Query: 1 HGLCKKKGKVEEACRFFEKMVDEGIPPYPDTCEILRDKLLQIGLREQVGVLACKMKRSTS 180
HGLCKK+GK+EEACR+FE M+DEGIPPY T E+LR++LL +G + + +LA KM RS+S
Sbjct: 432 HGLCKKRGKLEEACRYFEIMIDEGIPPYSSTVELLRNRLLGLGFLDNIEILANKMARSSS 491
Query: 181 CKIQELSLAMEGRT 222
C IQEL+ AM G+T
Sbjct: 492 CSIQELANAMRGKT 505
>ref|XP_006465352.1| PREDICTED: pentatricopeptide repeat-containing protein At1g52640,
mitochondrial-like [Citrus sinensis]
Length = 531
Score = 101 bits (252), Expect = 1e-19
Identities = 46/73 (63%), Positives = 60/73 (82%)
Frame = +1
Query: 1 HGLCKKKGKVEEACRFFEKMVDEGIPPYPDTCEILRDKLLQIGLREQVGVLACKMKRSTS 180
HGLCKKKGK+EEAC++FE MVDEGIPPY T E+LR++L+ +G + + +LA KM+RSTS
Sbjct: 443 HGLCKKKGKLEEACKYFEMMVDEGIPPYSSTVEMLRNRLVGLGFLDVIEILADKMERSTS 502
Query: 181 CKIQELSLAMEGR 219
C IQEL+ AM G+
Sbjct: 503 CTIQELANAMRGK 515
>ref|XP_004503476.1| PREDICTED: pentatricopeptide repeat-containing protein At1g52640,
mitochondrial-like isoform X1 [Cicer arietinum]
Length = 524
Score = 100 bits (250), Expect = 2e-19
Identities = 47/88 (53%), Positives = 62/88 (70%)
Frame = +1
Query: 1 HGLCKKKGKVEEACRFFEKMVDEGIPPYPDTCEILRDKLLQIGLREQVGVLACKMKRSTS 180
HG CKKKGK+EEACR+FE MVDEGIPPY T E+LR++LL +GL + + +LA KM++STS
Sbjct: 435 HGFCKKKGKLEEACRYFEIMVDEGIPPYVTTIEMLRNRLLGLGLLDNIEILANKMRQSTS 494
Query: 181 CKIQELSLAMEGRTKVDSANEKKGQPVE 264
C IQEL+ M G + + +E
Sbjct: 495 CSIQELANIMTGARAAQKTSRRDESDIE 522
>gb|EXB67320.1| hypothetical protein L484_025802 [Morus notabilis]
Length = 529
Score = 100 bits (249), Expect = 3e-19
Identities = 45/72 (62%), Positives = 58/72 (80%)
Frame = +1
Query: 1 HGLCKKKGKVEEACRFFEKMVDEGIPPYPDTCEILRDKLLQIGLREQVGVLACKMKRSTS 180
HGLCKKKGK+EEAC++FE M+DEGIPPY T E+LR++LL +GL E + ++A KM+RSTS
Sbjct: 441 HGLCKKKGKLEEACKYFETMIDEGIPPYSTTVEMLRNRLLGLGLLEHIDIIARKMERSTS 500
Query: 181 CKIQELSLAMEG 216
C IQE + M G
Sbjct: 501 CLIQEFANLMRG 512
>ref|XP_003630734.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355524756|gb|AET05210.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 520
Score = 99.0 bits (245), Expect = 9e-19
Identities = 45/88 (51%), Positives = 62/88 (70%)
Frame = +1
Query: 1 HGLCKKKGKVEEACRFFEKMVDEGIPPYPDTCEILRDKLLQIGLREQVGVLACKMKRSTS 180
HGLCKKKGK+EEAC++F M+DEGIPPY T E+LR++LL +GL + + +LA KM++STS
Sbjct: 431 HGLCKKKGKLEEACKYFAMMIDEGIPPYDTTIEMLRNRLLGLGLLDNIEILAAKMRQSTS 490
Query: 181 CKIQELSLAMEGRTKVDSANEKKGQPVE 264
C IQEL+ M G + + +E
Sbjct: 491 CSIQELANIMIGARSAQNTWRRDESDIE 518
>gb|EEC84482.1| hypothetical protein OsI_31142 [Oryza sativa Indica Group]
Length = 586
Score = 98.2 bits (243), Expect = 2e-18
Identities = 44/70 (62%), Positives = 56/70 (80%)
Frame = +1
Query: 1 HGLCKKKGKVEEACRFFEKMVDEGIPPYPDTCEILRDKLLQIGLREQVGVLACKMKRSTS 180
HGL KKG+ E+AC +F +MVDEGIPPY TCE+LRD+LL +GLR+Q+GVL +M+RSTS
Sbjct: 450 HGLASKKGRAEDACSYFVRMVDEGIPPYQATCEVLRDRLLMLGLRDQLGVLTDRMRRSTS 509
Query: 181 CKIQELSLAM 210
IQE+S M
Sbjct: 510 YTIQEMSTVM 519
>gb|EEE69598.1| hypothetical protein OsJ_29150 [Oryza sativa Japonica Group]
Length = 579
Score = 97.8 bits (242), Expect = 2e-18
Identities = 44/70 (62%), Positives = 56/70 (80%)
Frame = +1
Query: 1 HGLCKKKGKVEEACRFFEKMVDEGIPPYPDTCEILRDKLLQIGLREQVGVLACKMKRSTS 180
HGL KKG+ E+AC +F +MVDEGIPPY TCE+LRD+LL +GLR+Q+GVL +M+RSTS
Sbjct: 443 HGLASKKGRAEDACSYFVRMVDEGIPPYQATCEVLRDRLLMLGLRDQLGVLTDRMRRSTS 502
Query: 181 CKIQELSLAM 210
IQE+S M
Sbjct: 503 YTIQEMSTIM 512
>ref|XP_006364201.1| PREDICTED: pentatricopeptide repeat-containing protein At1g52640,
mitochondrial-like [Solanum tuberosum]
Length = 550
Score = 96.7 bits (239), Expect = 5e-18
Identities = 44/72 (61%), Positives = 56/72 (77%)
Frame = +1
Query: 1 HGLCKKKGKVEEACRFFEKMVDEGIPPYPDTCEILRDKLLQIGLREQVGVLACKMKRSTS 180
HG C+KKGK+EEAC++FE M+DEGIPPY +TCE LR++L+ G EQ +LA KM+RSTS
Sbjct: 460 HGFCQKKGKLEEACKYFEMMIDEGIPPYTETCEKLRNRLIGHGFAEQTEILADKMERSTS 519
Query: 181 CKIQELSLAMEG 216
IQEL+ M G
Sbjct: 520 SLIQELASVMRG 531
>ref|XP_004235996.1| PREDICTED: pentatricopeptide repeat-containing protein At1g52640,
mitochondrial-like [Solanum lycopersicum]
Length = 550
Score = 95.9 bits (237), Expect = 8e-18
Identities = 44/72 (61%), Positives = 56/72 (77%)
Frame = +1
Query: 1 HGLCKKKGKVEEACRFFEKMVDEGIPPYPDTCEILRDKLLQIGLREQVGVLACKMKRSTS 180
HG C+KKGK+EEAC++FE M+DEGIPPY +TCE LR++L+ G EQ +LA KM+RSTS
Sbjct: 460 HGFCQKKGKLEEACKYFEMMIDEGIPPYTETCEKLRNRLIGHGFAEQTEILADKMERSTS 519
Query: 181 CKIQELSLAMEG 216
IQEL+ M G
Sbjct: 520 SLIQELAGVMRG 531
>ref|XP_003538658.1| PREDICTED: pentatricopeptide repeat-containing protein At1g52640,
mitochondrial-like [Glycine max]
Length = 523
Score = 92.8 bits (229), Expect = 7e-17
Identities = 43/88 (48%), Positives = 60/88 (68%)
Frame = +1
Query: 1 HGLCKKKGKVEEACRFFEKMVDEGIPPYPDTCEILRDKLLQIGLREQVGVLACKMKRSTS 180
HG CKKKGK+EEAC++FE M+DEGIPPY T E+LR++LL +G + + +LA KM++STS
Sbjct: 434 HGFCKKKGKLEEACKYFEMMIDEGIPPYVTTVEMLRNQLLGLGFLDHIEILAAKMRQSTS 493
Query: 181 CKIQELSLAMEGRTKVDSANEKKGQPVE 264
IQEL+ M G + + +E
Sbjct: 494 YAIQELANIMIGNRTTHNTLRRDEMDIE 521
>ref|XP_002462300.1| hypothetical protein SORBIDRAFT_02g023500 [Sorghum bicolor]
gi|241925677|gb|EER98821.1| hypothetical protein
SORBIDRAFT_02g023500 [Sorghum bicolor]
Length = 541
Score = 92.8 bits (229), Expect = 7e-17
Identities = 42/82 (51%), Positives = 61/82 (74%)
Frame = +1
Query: 1 HGLCKKKGKVEEACRFFEKMVDEGIPPYPDTCEILRDKLLQIGLREQVGVLACKMKRSTS 180
HGL KKG+ EEAC +F +MVD+GIPPY TC++LRD+LL++GLR+ + +L +M+RSTS
Sbjct: 435 HGLSCKKGRAEEACSYFLRMVDDGIPPYQATCQVLRDRLLRLGLRDDLEMLTDRMRRSTS 494
Query: 181 CKIQELSLAMEGRTKVDSANEK 246
C IQ+L+ M + ++ N K
Sbjct: 495 CTIQDLASIMCNKRAEETRNLK 516
>ref|NP_175673.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207559|sp|Q9SSR6.1|PPR78_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At1g52640, mitochondrial; Flags: Precursor
gi|5903042|gb|AAD55601.1|AC008016_11 Contains 2 PF|01535
DUF domains [Arabidopsis thaliana]
gi|45773940|gb|AAS76774.1| At1g52640 [Arabidopsis
thaliana] gi|62320530|dbj|BAD95108.1| hypothetical
protein [Arabidopsis thaliana]
gi|332194712|gb|AEE32833.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 523
Score = 92.4 bits (228), Expect = 9e-17
Identities = 41/75 (54%), Positives = 59/75 (78%)
Frame = +1
Query: 1 HGLCKKKGKVEEACRFFEKMVDEGIPPYPDTCEILRDKLLQIGLREQVGVLACKMKRSTS 180
HGL +KKGK+EEACR+FE M+DEGIPPY T E+LR++L+ G + V VLA KM+RS+S
Sbjct: 426 HGLVRKKGKLEEACRYFEMMIDEGIPPYSTTVEMLRNRLVGWGQMDVVDVLAGKMERSSS 485
Query: 181 CKIQELSLAMEGRTK 225
C +Q++++ M G+ +
Sbjct: 486 CSVQDMAVEMRGKRR 500
>ref|XP_003516732.1| PREDICTED: pentatricopeptide repeat-containing protein At1g52640,
mitochondrial-like [Glycine max]
Length = 523
Score = 92.4 bits (228), Expect = 9e-17
Identities = 42/72 (58%), Positives = 56/72 (77%)
Frame = +1
Query: 1 HGLCKKKGKVEEACRFFEKMVDEGIPPYPDTCEILRDKLLQIGLREQVGVLACKMKRSTS 180
HG CKKKGK+EEAC++FE M+DEGIPPY T E+LR++LL +G + + +LA KM++STS
Sbjct: 434 HGFCKKKGKLEEACKYFEMMIDEGIPPYVTTVEMLRNRLLGLGFIDHIEILAAKMRQSTS 493
Query: 181 CKIQELSLAMEG 216
IQEL+ M G
Sbjct: 494 YAIQELANIMIG 505