BLASTX nr result

ID: Zingiber24_contig00034637 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00034637
         (204 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI35950.3| unnamed protein product [Vitis vinifera]               60   3e-07
emb|CAN63206.1| hypothetical protein VITISV_010618 [Vitis vinifera]    60   3e-07
ref|XP_002279673.2| PREDICTED: protein ROOT HAIR DEFECTIVE 3 hom...    57   2e-06

>emb|CBI35950.3| unnamed protein product [Vitis vinifera]
          Length = 1029

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 28/38 (73%), Positives = 32/38 (84%)
 Frame = +1

Query: 91  SSQQGMANECCSIQLIDGDGVFNVTGLEHFMKSVKLAE 204
           S + G A+ECCS QLIDGDG+FNV GLE+FMK VKLAE
Sbjct: 214 SVKMGNADECCSTQLIDGDGMFNVHGLENFMKEVKLAE 251


>emb|CAN63206.1| hypothetical protein VITISV_010618 [Vitis vinifera]
          Length = 857

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 28/38 (73%), Positives = 32/38 (84%)
 Frame = +1

Query: 91  SSQQGMANECCSIQLIDGDGVFNVTGLEHFMKSVKLAE 204
           S + G A+ECCS QLIDGDG+FNV GLE+FMK VKLAE
Sbjct: 94  SVKMGNADECCSTQLIDGDGMFNVHGLENFMKEVKLAE 131


>ref|XP_002279673.2| PREDICTED: protein ROOT HAIR DEFECTIVE 3 homolog 1-like [Vitis
           vinifera]
          Length = 871

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 26/32 (81%), Positives = 29/32 (90%)
 Frame = +1

Query: 109 ANECCSIQLIDGDGVFNVTGLEHFMKSVKLAE 204
           A+ECCS QLIDGDG+FNV GLE+FMK VKLAE
Sbjct: 62  ADECCSTQLIDGDGMFNVHGLENFMKEVKLAE 93


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