BLASTX nr result

ID: Zingiber24_contig00034521 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00034521
         (509 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFW73415.1| hypothetical protein ZEAMMB73_795206 [Zea mays]         66   5e-09
ref|NP_001048115.1| Os02g0747400 [Oryza sativa Japonica Group] g...    56   4e-06
dbj|BAJ95338.1| predicted protein [Hordeum vulgare subsp. vulgare]     55   7e-06
gb|EAZ24612.1| hypothetical protein OsJ_08375 [Oryza sativa Japo...    55   7e-06

>gb|AFW73415.1| hypothetical protein ZEAMMB73_795206 [Zea mays]
          Length = 400

 Score = 65.9 bits (159), Expect = 5e-09
 Identities = 46/142 (32%), Positives = 62/142 (43%), Gaps = 13/142 (9%)
 Frame = +3

Query: 51  RKRRWEEELVGRRHHQPPQNPIMAVGYGQ---PGRVWMAMANPNNQQPAIITTSITNADQ 221
           RKRRWE+E+  ++  Q  Q      GY Q   PG VWM  ++ N Q     ++  +    
Sbjct: 222 RKRRWEQEMQQQQQQQAQQYQQQMAGYTQSQMPGTVWMVPSSNNTQGGGTPSSGGSGGCT 281

Query: 222 SPTTWSFPNVXXXXXXXXXXXXVFRGALPGGLQYFMNF----------XXXXXXXXXXXX 371
             + W+FP +            V+RG++P GL +FMNF                      
Sbjct: 282 GESIWTFPQM----GSATAAAAVYRGSVPSGL-HFMNFPAPVALLPGQQLGLGSVGGGGG 336

Query: 372 XXXXXXHGEGHMGILAAFNAYR 437
                  GEGHMGILAA NAYR
Sbjct: 337 GSGGGSGGEGHMGILAALNAYR 358


>ref|NP_001048115.1| Os02g0747400 [Oryza sativa Japonica Group]
           gi|46390829|dbj|BAD16334.1| putative TCP-domain protein
           [Oryza sativa Japonica Group]
           gi|46390930|dbj|BAD16444.1| putative TCP-domain protein
           [Oryza sativa Japonica Group]
           gi|113537646|dbj|BAF10029.1| Os02g0747400 [Oryza sativa
           Japonica Group] gi|294336598|gb|ADE62742.1| TCP
           transcription factor [Oryza sativa Japonica Group]
          Length = 410

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 48/160 (30%), Positives = 63/160 (39%), Gaps = 18/160 (11%)
 Frame = +3

Query: 12  EPVRSETADLAN-ARKRRWEEELVGRRHHQPPQNPIMAVGYGQ----------PGRVWMA 158
           +P  S  A  A+ +RKRRWE+E+  ++  Q  Q       Y Q          PG VWM 
Sbjct: 213 QPSPSAAAAAADLSRKRRWEQEMQQQQQQQQQQQQQQQQQYQQQMAGYTQSQMPGTVWMV 272

Query: 159 MANPNNQQPAIITTSITNADQSPTTWSFPNVXXXXXXXXXXXXVFRGALPGGLQYFMNFX 338
            +N                    + W+FP +            V+RG++P GL +FMNF 
Sbjct: 273 PSNSTQGGGPSGGGGGGGGGSGESIWTFPQMSSAAAAAA----VYRGSVPSGL-HFMNFP 327

Query: 339 XXXXXXXXXXXXXXXXXHG-------EGHMGILAAFNAYR 437
                             G       EGHMGILAA NAYR
Sbjct: 328 APMALLPGQQLGLGPVGGGGGGGGGGEGHMGILAALNAYR 367


>dbj|BAJ95338.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 404

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 50/153 (32%), Positives = 63/153 (41%), Gaps = 18/153 (11%)
 Frame = +3

Query: 33  ADLANARKRRWEEELVGRRHHQPP--------QNPIMAVGYGQ---PGRVWMAMANPNNQ 179
           ADL+  RKRRWE+E+  ++  Q          Q      GY Q   PG VWM  +N  N 
Sbjct: 219 ADLS--RKRRWEQEMQQQQQQQQQHQQQQQQQQYQQQMAGYTQSQMPGTVWMVPSN--NT 274

Query: 180 QPAIITTSITNADQSPTTWSFPNVXXXXXXXXXXXXVFRGALPGGLQYFMNFXXXXXXXX 359
           Q     +         + W+FP V            V+RG++P GL +FMNF        
Sbjct: 275 QGGGAPSGGGAGGSGESIWTFPQVGSVGASAA----VYRGSVPSGL-HFMNFPAPMALLP 329

Query: 360 XXXXXXXXXXHG-------EGHMGILAAFNAYR 437
                              EGHMGILAA NAYR
Sbjct: 330 GQQLGLGPVGGSGGGAGGSEGHMGILAALNAYR 362


>gb|EAZ24612.1| hypothetical protein OsJ_08375 [Oryza sativa Japonica Group]
          Length = 409

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 49/161 (30%), Positives = 64/161 (39%), Gaps = 19/161 (11%)
 Frame = +3

Query: 12  EPVRSETADLAN-ARKRRWEEELVGRRHHQPPQNPIMA--------VGYGQ---PGRVWM 155
           +P  S  A  A+ +RKRRWE+E+  ++  Q  Q              GY Q   PG VWM
Sbjct: 211 QPSPSAAAAAADLSRKRRWEQEMQQQQQQQQQQQQQQQQQQYQQQMAGYTQSQMPGTVWM 270

Query: 156 AMANPNNQQPAIITTSITNADQSPTTWSFPNVXXXXXXXXXXXXVFRGALPGGLQYFMNF 335
             +N                    + W+FP +            V+RG++P GL +FMNF
Sbjct: 271 VPSNSTQGGGPSGGGGGGGGGSGESIWTFPQMSSAAAAAA----VYRGSVPSGL-HFMNF 325

Query: 336 XXXXXXXXXXXXXXXXXXHG-------EGHMGILAAFNAYR 437
                              G       EGHMGILAA NAYR
Sbjct: 326 PAPMALLPGQQLGLGPVGGGGGGGGGGEGHMGILAALNAYR 366


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