BLASTX nr result
ID: Zingiber24_contig00034394
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00034394
(738 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EXC13620.1| RING-H2 zinc finger protein RHA1a [Morus notabilis] 68 3e-09
gb|EOY30109.1| RING/U-box superfamily protein, putative [Theobro... 68 3e-09
gb|EMJ03760.1| hypothetical protein PRUPE_ppa011348mg [Prunus pe... 68 3e-09
ref|XP_006372040.1| hypothetical protein POPTR_0018s08280g, part... 67 6e-09
ref|XP_002324208.1| predicted protein [Populus trichocarpa] 67 6e-09
ref|XP_006652684.1| PREDICTED: RING-H2 finger protein ATL11-like... 67 8e-09
ref|XP_002516178.1| RING-H2 finger protein ATL3J, putative [Rici... 67 8e-09
gb|EAZ31735.1| hypothetical protein OsJ_15887 [Oryza sativa Japo... 67 8e-09
gb|EAY95267.1| hypothetical protein OsI_17090 [Oryza sativa Indi... 67 8e-09
ref|NP_001053644.1| Os04g0579200 [Oryza sativa Japonica Group] g... 67 8e-09
ref|XP_002309447.1| zinc finger family protein [Populus trichoca... 66 1e-08
ref|XP_004976579.1| PREDICTED: E3 ubiquitin-protein ligase RHA1B... 65 2e-08
ref|XP_004953456.1| PREDICTED: probable E3 ubiquitin-protein lig... 65 2e-08
dbj|BAK02114.1| predicted protein [Hordeum vulgare subsp. vulgare] 64 4e-08
ref|XP_004287687.1| PREDICTED: RING-H2 finger protein ATL47-like... 64 7e-08
ref|XP_002448374.1| hypothetical protein SORBIDRAFT_06g026220 [S... 64 7e-08
gb|EOX95903.1| Zinc finger protein, putative [Theobroma cacao] 63 9e-08
ref|NP_001146854.1| RING zinc finger protein-like [Zea mays] gi|... 63 9e-08
ref|XP_006400653.1| hypothetical protein EUTSA_v10014811mg [Eutr... 63 1e-07
gb|EPS71290.1| hypothetical protein M569_03468, partial [Genlise... 63 1e-07
>gb|EXC13620.1| RING-H2 zinc finger protein RHA1a [Morus notabilis]
Length = 176
Score = 68.2 bits (165), Expect = 3e-09
Identities = 32/59 (54%), Positives = 37/59 (62%)
Frame = -3
Query: 259 TTYEDLAGEEEDERSGGAGVTCAVCLSEVAAGDAVWELRNCRHVFHKGCLDRWLDHDEH 83
TT+ D+ ER TCAVCL+ + D V ELRNC HVFH+ CLDRWLDHD H
Sbjct: 78 TTFGDIT-----ERLRNDNDTCAVCLNRLRTNDEVRELRNCCHVFHRECLDRWLDHDHH 131
>gb|EOY30109.1| RING/U-box superfamily protein, putative [Theobroma cacao]
Length = 181
Score = 68.2 bits (165), Expect = 3e-09
Identities = 32/58 (55%), Positives = 39/58 (67%)
Frame = -3
Query: 259 TTYEDLAGEEEDERSGGAGVTCAVCLSEVAAGDAVWELRNCRHVFHKGCLDRWLDHDE 86
TT+ED ER TCAVCLS++ GD V ELRNC HVFHK C+DRW+D+D+
Sbjct: 71 TTFEDAK-----ERVPWVSDTCAVCLSQLKEGDEVRELRNCCHVFHKDCIDRWVDYDQ 123
>gb|EMJ03760.1| hypothetical protein PRUPE_ppa011348mg [Prunus persica]
Length = 214
Score = 68.2 bits (165), Expect = 3e-09
Identities = 29/60 (48%), Positives = 41/60 (68%), Gaps = 1/60 (1%)
Frame = -3
Query: 259 TTYEDLAGEEEDERSGGAGV-TCAVCLSEVAAGDAVWELRNCRHVFHKGCLDRWLDHDEH 83
TT+E++ + R+ +G TCAVCLS++ D V ELRNC HVFH C+DRWL++ +H
Sbjct: 104 TTFEEITNRQGSYRASSSGCDTCAVCLSQLEMEDQVRELRNCSHVFHTECIDRWLEYHDH 163
>ref|XP_006372040.1| hypothetical protein POPTR_0018s08280g, partial [Populus
trichocarpa] gi|550318322|gb|ERP49837.1| hypothetical
protein POPTR_0018s08280g, partial [Populus trichocarpa]
Length = 148
Score = 67.0 bits (162), Expect = 6e-09
Identities = 32/57 (56%), Positives = 38/57 (66%)
Frame = -3
Query: 259 TTYEDLAGEEEDERSGGAGVTCAVCLSEVAAGDAVWELRNCRHVFHKGCLDRWLDHD 89
TT+ D+ ER G TCAVCLS++ D V ELRNC HVFHK C+DRW+DHD
Sbjct: 45 TTFNDVI-----ERVPGVCDTCAVCLSQLRDQDEVRELRNCGHVFHKECIDRWVDHD 96
>ref|XP_002324208.1| predicted protein [Populus trichocarpa]
Length = 174
Score = 67.0 bits (162), Expect = 6e-09
Identities = 32/57 (56%), Positives = 38/57 (66%)
Frame = -3
Query: 259 TTYEDLAGEEEDERSGGAGVTCAVCLSEVAAGDAVWELRNCRHVFHKGCLDRWLDHD 89
TT+ D+ ER G TCAVCLS++ D V ELRNC HVFHK C+DRW+DHD
Sbjct: 69 TTFNDVI-----ERVPGVCDTCAVCLSQLRDQDEVRELRNCGHVFHKECIDRWVDHD 120
>ref|XP_006652684.1| PREDICTED: RING-H2 finger protein ATL11-like, partial [Oryza
brachyantha]
Length = 183
Score = 66.6 bits (161), Expect = 8e-09
Identities = 26/40 (65%), Positives = 31/40 (77%)
Frame = -3
Query: 205 GVTCAVCLSEVAAGDAVWELRNCRHVFHKGCLDRWLDHDE 86
G CAVCLS + GD V L NCRHVFH+GCLDRW++HD+
Sbjct: 80 GGDCAVCLSGIGGGDEVRRLTNCRHVFHRGCLDRWMEHDD 119
>ref|XP_002516178.1| RING-H2 finger protein ATL3J, putative [Ricinus communis]
gi|223544664|gb|EEF46180.1| RING-H2 finger protein
ATL3J, putative [Ricinus communis]
Length = 177
Score = 66.6 bits (161), Expect = 8e-09
Identities = 31/57 (54%), Positives = 39/57 (68%)
Frame = -3
Query: 259 TTYEDLAGEEEDERSGGAGVTCAVCLSEVAAGDAVWELRNCRHVFHKGCLDRWLDHD 89
TT+ D+ +R GA TCAVCL +++ D V ELRNC HVFHK C+DRW+DHD
Sbjct: 73 TTFGDIT-----DRISGACDTCAVCLGQLSELDEVRELRNCCHVFHKECIDRWVDHD 124
>gb|EAZ31735.1| hypothetical protein OsJ_15887 [Oryza sativa Japonica Group]
Length = 212
Score = 66.6 bits (161), Expect = 8e-09
Identities = 26/40 (65%), Positives = 31/40 (77%)
Frame = -3
Query: 205 GVTCAVCLSEVAAGDAVWELRNCRHVFHKGCLDRWLDHDE 86
G CAVCLS + GD V L NCRHVFH+GCLDRW++HD+
Sbjct: 109 GGDCAVCLSGIGGGDEVRRLSNCRHVFHRGCLDRWMEHDD 148
>gb|EAY95267.1| hypothetical protein OsI_17090 [Oryza sativa Indica Group]
Length = 212
Score = 66.6 bits (161), Expect = 8e-09
Identities = 26/40 (65%), Positives = 31/40 (77%)
Frame = -3
Query: 205 GVTCAVCLSEVAAGDAVWELRNCRHVFHKGCLDRWLDHDE 86
G CAVCLS + GD V L NCRHVFH+GCLDRW++HD+
Sbjct: 109 GGDCAVCLSGIGGGDEVRRLSNCRHVFHRGCLDRWMEHDD 148
>ref|NP_001053644.1| Os04g0579200 [Oryza sativa Japonica Group]
gi|32488512|emb|CAE03264.1| OSJNBa0011J08.19 [Oryza
sativa Japonica Group] gi|113565215|dbj|BAF15558.1|
Os04g0579200 [Oryza sativa Japonica Group]
gi|215713537|dbj|BAG94674.1| unnamed protein product
[Oryza sativa Japonica Group]
Length = 212
Score = 66.6 bits (161), Expect = 8e-09
Identities = 26/40 (65%), Positives = 31/40 (77%)
Frame = -3
Query: 205 GVTCAVCLSEVAAGDAVWELRNCRHVFHKGCLDRWLDHDE 86
G CAVCLS + GD V L NCRHVFH+GCLDRW++HD+
Sbjct: 109 GGDCAVCLSGIGGGDEVRRLSNCRHVFHRGCLDRWMEHDD 148
>ref|XP_002309447.1| zinc finger family protein [Populus trichocarpa]
gi|118483893|gb|ABK93837.1| unknown [Populus
trichocarpa] gi|222855423|gb|EEE92970.1| zinc finger
family protein [Populus trichocarpa]
Length = 168
Score = 66.2 bits (160), Expect = 1e-08
Identities = 33/60 (55%), Positives = 40/60 (66%), Gaps = 1/60 (1%)
Frame = -3
Query: 259 TTYEDLAGEEEDERSGGAGVTCAVCLSEVAAGDAVWELRNCRHVFHKGCLDRWLDHD-EH 83
TT+ D+ ER G TCAVCLS++ D V ELRNC HVFH+ C+DRW+DHD EH
Sbjct: 69 TTFGDVT-----ERMPGVCDTCAVCLSQLRDQDEVRELRNCCHVFHRDCIDRWVDHDHEH 123
>ref|XP_004976579.1| PREDICTED: E3 ubiquitin-protein ligase RHA1B-like [Setaria italica]
Length = 218
Score = 65.1 bits (157), Expect = 2e-08
Identities = 25/40 (62%), Positives = 30/40 (75%)
Frame = -3
Query: 205 GVTCAVCLSEVAAGDAVWELRNCRHVFHKGCLDRWLDHDE 86
G CAVCLS + GD V L NCRH FH+GCLDRW++HD+
Sbjct: 115 GGDCAVCLSGIGGGDEVRRLSNCRHAFHRGCLDRWMEHDQ 154
>ref|XP_004953456.1| PREDICTED: probable E3 ubiquitin-protein ligase RHA2B-like [Setaria
italica]
Length = 212
Score = 65.1 bits (157), Expect = 2e-08
Identities = 29/56 (51%), Positives = 36/56 (64%)
Frame = -3
Query: 253 YEDLAGEEEDERSGGAGVTCAVCLSEVAAGDAVWELRNCRHVFHKGCLDRWLDHDE 86
+E+LAG + G CAVCLS + AGD V L NCRH FH+GCLD W+ HD+
Sbjct: 97 FEELAG------TACGGGDCAVCLSGIGAGDEVRRLSNCRHAFHRGCLDHWMAHDQ 146
>dbj|BAK02114.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 205
Score = 64.3 bits (155), Expect = 4e-08
Identities = 24/37 (64%), Positives = 29/37 (78%)
Frame = -3
Query: 196 CAVCLSEVAAGDAVWELRNCRHVFHKGCLDRWLDHDE 86
CAVCLS + GD V L NCRH FH+GCLDRW++HD+
Sbjct: 107 CAVCLSGIGGGDEVRRLTNCRHAFHRGCLDRWMEHDQ 143
>ref|XP_004287687.1| PREDICTED: RING-H2 finger protein ATL47-like [Fragaria vesca subsp.
vesca]
Length = 196
Score = 63.5 bits (153), Expect = 7e-08
Identities = 30/59 (50%), Positives = 40/59 (67%)
Frame = -3
Query: 259 TTYEDLAGEEEDERSGGAGVTCAVCLSEVAAGDAVWELRNCRHVFHKGCLDRWLDHDEH 83
TTYE++ + + S TCAVCL+++ GD V ELRNC HVFH C+DRWLD++ H
Sbjct: 82 TTYEEVTRRQGN--SCRHWDTCAVCLTQLEMGDEVRELRNCCHVFHTECIDRWLDYNGH 138
>ref|XP_002448374.1| hypothetical protein SORBIDRAFT_06g026220 [Sorghum bicolor]
gi|241939557|gb|EES12702.1| hypothetical protein
SORBIDRAFT_06g026220 [Sorghum bicolor]
Length = 194
Score = 63.5 bits (153), Expect = 7e-08
Identities = 28/50 (56%), Positives = 34/50 (68%)
Frame = -3
Query: 235 EEEDERSGGAGVTCAVCLSEVAAGDAVWELRNCRHVFHKGCLDRWLDHDE 86
E E+ R GG CAVCLS + D V L NCRHVFH+ CLDRW++HD+
Sbjct: 82 ELEEARVGG---DCAVCLSGIGGRDEVRRLSNCRHVFHRACLDRWMEHDQ 128
>gb|EOX95903.1| Zinc finger protein, putative [Theobroma cacao]
Length = 168
Score = 63.2 bits (152), Expect = 9e-08
Identities = 24/38 (63%), Positives = 30/38 (78%)
Frame = -3
Query: 199 TCAVCLSEVAAGDAVWELRNCRHVFHKGCLDRWLDHDE 86
+CAVCL E G+ + LRNCRHVFH+ CLDRW+DHD+
Sbjct: 89 SCAVCLYEFEGGEEIRWLRNCRHVFHRACLDRWMDHDQ 126
>ref|NP_001146854.1| RING zinc finger protein-like [Zea mays]
gi|195604260|gb|ACG23960.1| RING zinc finger
protein-like [Zea mays]
Length = 173
Score = 63.2 bits (152), Expect = 9e-08
Identities = 29/57 (50%), Positives = 37/57 (64%)
Frame = -3
Query: 259 TTYEDLAGEEEDERSGGAGVTCAVCLSEVAAGDAVWELRNCRHVFHKGCLDRWLDHD 89
TT+ D A + S TCAVCL ++ GD V ELRNC HVFH+ C+DRWLD++
Sbjct: 63 TTFRDAADRSPELISD----TCAVCLGDLEDGDEVRELRNCSHVFHRECIDRWLDYE 115
>ref|XP_006400653.1| hypothetical protein EUTSA_v10014811mg [Eutrema salsugineum]
gi|557101743|gb|ESQ42106.1| hypothetical protein
EUTSA_v10014811mg [Eutrema salsugineum]
Length = 179
Score = 62.8 bits (151), Expect = 1e-07
Identities = 29/57 (50%), Positives = 37/57 (64%)
Frame = -3
Query: 259 TTYEDLAGEEEDERSGGAGVTCAVCLSEVAAGDAVWELRNCRHVFHKGCLDRWLDHD 89
TT+ D A + S TCAVCL ++ GD V ELRNC HVFH+ C+DRWLD++
Sbjct: 69 TTFRDAAERSPELVSD----TCAVCLGDLEDGDEVRELRNCSHVFHRECIDRWLDYE 121
>gb|EPS71290.1| hypothetical protein M569_03468, partial [Genlisea aurea]
Length = 167
Score = 62.8 bits (151), Expect = 1e-07
Identities = 23/37 (62%), Positives = 28/37 (75%)
Frame = -3
Query: 196 CAVCLSEVAAGDAVWELRNCRHVFHKGCLDRWLDHDE 86
CAVCL E D + LRNCRH+FH+GCLD W+DHD+
Sbjct: 90 CAVCLYEFGGDDEIRRLRNCRHIFHRGCLDSWMDHDQ 126