BLASTX nr result
ID: Zingiber24_contig00034297
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00034297
(503 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006375647.1| hypothetical protein POPTR_0014s18610g, part... 71 1e-10
emb|CAA18234.1| putative protein [Arabidopsis thaliana] gi|72694... 63 4e-08
gb|AAD21699.1| Contains reverse transcriptase domain (rvt) PF|00... 62 1e-07
dbj|BAF00918.1| putative reverse transcriptase [Arabidopsis thal... 61 1e-07
gb|ABN08700.1| Endonuclease/exonuclease/phosphatase [Medicago tr... 60 3e-07
gb|AAG50806.1|AC079281_8 unknown protein [Arabidopsis thaliana] 59 5e-07
gb|AAD32866.1|AC005489_4 F14N23.4 [Arabidopsis thaliana] 59 5e-07
dbj|BAB01845.1| non-LTR retroelement reverse transcriptase-like ... 59 7e-07
emb|CAA66812.1| non-ltr retrotransposon reverse transcriptase-li... 59 7e-07
gb|EOY07958.1| Uncharacterized protein TCM_022291 [Theobroma cacao] 58 1e-06
ref|XP_006380103.1| hypothetical protein POPTR_0008s21940g, part... 57 2e-06
ref|NP_174931.1| DNAse I-like superfamily protein [Arabidopsis t... 57 2e-06
gb|EOY25454.1| Uncharacterized protein TCM_026877 [Theobroma cacao] 57 3e-06
gb|EOY17514.1| Uncharacterized protein TCM_042330 [Theobroma cacao] 57 3e-06
gb|EOY17513.1| Uncharacterized protein TCM_036737 [Theobroma cacao] 57 3e-06
ref|XP_004253295.1| PREDICTED: uncharacterized protein LOC101253... 57 3e-06
ref|XP_004244885.1| PREDICTED: uncharacterized protein LOC101261... 57 3e-06
ref|XP_002331338.1| predicted protein [Populus trichocarpa] 57 3e-06
ref|XP_004239563.1| PREDICTED: uncharacterized protein LOC101259... 57 3e-06
gb|EOY02238.1| Uncharacterized protein TCM_016762 [Theobroma cacao] 56 4e-06
>ref|XP_006375647.1| hypothetical protein POPTR_0014s18610g, partial [Populus
trichocarpa] gi|550324501|gb|ERP53444.1| hypothetical
protein POPTR_0014s18610g, partial [Populus trichocarpa]
Length = 303
Score = 71.2 bits (173), Expect = 1e-10
Identities = 39/132 (29%), Positives = 60/132 (45%)
Frame = -1
Query: 500 FTWTNGRVVCKLDRAMVNKIWLEQDRSAFAEFRPPGIYSDHASCIVSILEPRRPQTKSFK 321
F+WTN V KLDR ++N W R F P ++ DH+ +V L+P ++F
Sbjct: 100 FSWTNSSVWSKLDRVLINPSWSSLQRLTHVHFGSPSVFLDHSPAVVR-LDPYMQGRQNFN 158
Query: 320 FFNMWTTHHDFNRLVQENWTLADSMIRDGVCQFXXXXXXXXXXXXXXXXXKENYHHIQER 141
FFNMW TH F ++V W S G + + +++HI ER
Sbjct: 159 FFNMWATHDQFLQVVSSCW----SSPVYGTPMYILCRRLKLLKGPLKELNRLHFNHISER 214
Query: 140 AKRAQIHLDEVQ 105
R + L+++Q
Sbjct: 215 VSRLESQLEQLQ 226
>emb|CAA18234.1| putative protein [Arabidopsis thaliana] gi|7269488|emb|CAB79491.1|
putative protein [Arabidopsis thaliana]
Length = 1141
Score = 63.2 bits (152), Expect = 4e-08
Identities = 53/173 (30%), Positives = 80/173 (46%), Gaps = 7/173 (4%)
Frame = -1
Query: 500 FTWTNGR----VVCKLDRAMVNKIWLEQDRSAFAEFRPPGIYSDHASC-IVSILEPRRPQ 336
FTW N V K+DR +VN+ W S+F F PP +SDHASC +V L+P + +
Sbjct: 180 FTWWNKSKTRPVAKKIDRILVNESWSNLFPSSFGLFGPPD-FSDHASCGVVLELDPIKAK 238
Query: 335 TKSFKFFNMWTTHHDFNRLVQENWTLADSMIRDGVCQFXXXXXXXXXXXXXXXXXKENYH 156
+ FKFFN + +F LV + W + + G F + NY
Sbjct: 239 -RPFKFFNFLLKNPEFLNLVWDVWYSTNVV---GSSMFRVSKKLKALKKPIKDFSRLNYS 294
Query: 155 HIQERAKRAQIHLDEVQERVFAQGSLDE--EYKEAKRAADLLSRAEYLFYQQR 3
++++R + A L Q SL+ EA+R +L+ AE F++QR
Sbjct: 295 NLEKRTEEAHETLLSFQNLTLDNPSLENAAHELEAQRKWQILATAEESFFRQR 347
>gb|AAD21699.1| Contains reverse transcriptase domain (rvt) PF|00078 [Arabidopsis
thaliana]
Length = 1253
Score = 61.6 bits (148), Expect = 1e-07
Identities = 51/172 (29%), Positives = 77/172 (44%), Gaps = 6/172 (3%)
Frame = -1
Query: 500 FTWTNGR----VVCKLDRAMVNKIWLEQDRSAFAEFRPPGIYSDHASCIVSILEPRRPQT 333
FTW N V KLDR +VN+ W + SA+A F P +SDHASC V I +
Sbjct: 137 FTWWNKSATRPVAKKLDRILVNESWCSRFPSAYAVFGEPD-FSDHASCGVIINPLMHREK 195
Query: 332 KSFKFFNMWTTHHDFNRLVQENWTLADSMIRDGVCQFXXXXXXXXXXXXXXXXXKENYHH 153
+ F+F+N + DF LV E W + + G F EN+ +
Sbjct: 196 RPFRFYNFLLQNPDFISLVGELWYSINVV---GSSMFKMSKKLKALKNPIRTFSMENFSN 252
Query: 152 IQERAKRAQIHLDEVQERVFAQGSLDEE--YKEAKRAADLLSRAEYLFYQQR 3
+++R K A + Q + + ++ EA+R +L +AE F+ QR
Sbjct: 253 LEKRVKEAHNLVLYRQNKTLSDPTIPNAALEMEAQRKWLILVKAEESFFCQR 304
>dbj|BAF00918.1| putative reverse transcriptase [Arabidopsis thaliana]
Length = 910
Score = 61.2 bits (147), Expect = 1e-07
Identities = 42/144 (29%), Positives = 68/144 (47%), Gaps = 4/144 (2%)
Frame = -1
Query: 500 FTWTNGR----VVCKLDRAMVNKIWLEQDRSAFAEFRPPGIYSDHASCIVSILEPRRPQT 333
FTW+N + ++ KLDRA+ N W SA A F PPG SDHA CI+ I P
Sbjct: 187 FTWSNHQQDNPILRKLDRALANGEWFAVFPSALAVFDPPGD-SDHAPCIILIDNQPPPSK 245
Query: 332 KSFKFFNMWTTHHDFNRLVQENWTLADSMIRDGVCQFXXXXXXXXXXXXXXXXXKENYHH 153
KSFK+F+ ++H + + W A++++ G F + + +
Sbjct: 246 KSFKYFSFLSSHPSYLAALSTAWE-ANTLV--GSHMFSLRQHLKVAKLCCRTLNRLRFSN 302
Query: 152 IQERAKRAQIHLDEVQERVFAQGS 81
IQ+R ++ L+++Q + S
Sbjct: 303 IQQRTAQSLTRLEDIQVELLTSPS 326
>gb|ABN08700.1| Endonuclease/exonuclease/phosphatase [Medicago truncatula]
Length = 814
Score = 60.1 bits (144), Expect = 3e-07
Identities = 30/84 (35%), Positives = 44/84 (52%), Gaps = 5/84 (5%)
Frame = -1
Query: 500 FTWTNG-----RVVCKLDRAMVNKIWLEQDRSAFAEFRPPGIYSDHASCIVSILEPRRPQ 336
+TW N R+ K+DR + N WL++ +A E P G+ SDH + + P P+
Sbjct: 700 YTWCNNQTSGDRIYSKIDRFIANTSWLQKFTNAVGEVLPKGV-SDHCPISMDMSCPASPK 758
Query: 335 TKSFKFFNMWTTHHDFNRLVQENW 264
F+F N+ T HH F L+QE W
Sbjct: 759 NTPFRFINVLTDHHLFPALIQEKW 782
>gb|AAG50806.1|AC079281_8 unknown protein [Arabidopsis thaliana]
Length = 1213
Score = 59.3 bits (142), Expect = 5e-07
Identities = 50/172 (29%), Positives = 77/172 (44%), Gaps = 6/172 (3%)
Frame = -1
Query: 500 FTWTNGR----VVCKLDRAMVNKIWLEQDRSAFAEFRPPGIYSDHASCIVSILEPRRPQT 333
FTW N V K+DR +VN W S+ F +SDH SC V + E
Sbjct: 188 FTWWNKSHTTPVAKKIDRILVNDSWNALFPSSLGIFGSLD-FSDHVSCGVVLEETSIKAK 246
Query: 332 KSFKFFNMWTTHHDFNRLVQENWTLADSMIRDGVCQFXXXXXXXXXXXXXXXXXKENYHH 153
+ FKFFN + DF LV++NW + + G F + NY
Sbjct: 247 RPFKFFNYLLKNLDFLNLVRDNWFTLNVV---GSSMFRVSKKLKALKKPIKDFSRLNYSE 303
Query: 152 IQERAKRAQIHLDEVQERVFAQGS-LDEEYK-EAKRAADLLSRAEYLFYQQR 3
+++R K A L Q+R A + ++ ++ EA+R +L+ AE F++Q+
Sbjct: 304 LEKRTKEAHDFLIGCQDRTLADPTPINASFELEAERKWHILTAAEESFFRQK 355
>gb|AAD32866.1|AC005489_4 F14N23.4 [Arabidopsis thaliana]
Length = 1161
Score = 59.3 bits (142), Expect = 5e-07
Identities = 33/83 (39%), Positives = 45/83 (54%), Gaps = 4/83 (4%)
Frame = -1
Query: 500 FTWTNGR----VVCKLDRAMVNKIWLEQDRSAFAEFRPPGIYSDHASCIVSILEPRRPQT 333
FTW+N + ++ KLDRA+ N W SA A F PPG SDHA CI+ I P
Sbjct: 230 FTWSNHQQDNPILRKLDRALANGEWFAVFPSALAVFDPPGD-SDHAPCIILIDNQPPPSK 288
Query: 332 KSFKFFNMWTTHHDFNRLVQENW 264
KSFK+F+ ++H + + W
Sbjct: 289 KSFKYFSFLSSHPSYLAALSTAW 311
>dbj|BAB01845.1| non-LTR retroelement reverse transcriptase-like protein
[Arabidopsis thaliana]
Length = 893
Score = 58.9 bits (141), Expect = 7e-07
Identities = 51/176 (28%), Positives = 79/176 (44%), Gaps = 10/176 (5%)
Frame = -1
Query: 500 FTWTNG----RVVCKLDRAMVNKIWLEQDRSAFAEFRPPGIYSDHASCIV----SILEPR 345
+TW N + K+DR +VN W SA+A F P +SDH+SC V ++L+ +
Sbjct: 185 YTWWNKCSSRPLAKKIDRILVNDHWNTLFPSAYANFGEPD-FSDHSSCEVVLDPAVLKAK 243
Query: 344 RPQTKSFKFFNMWTTHHDFNRLVQENWTLADSMIRDGVCQFXXXXXXXXXXXXXXXXXKE 165
RP F+FFN + + DF +L++ENW S G + +E
Sbjct: 244 RP----FRFFNYFLHNPDFLQLIRENWY---SCNVSGSAMYRVSKKLKHLKLPICCFSRE 296
Query: 164 NYHHIQERAKRAQIHLDEVQERVFAQGSLDEE--YKEAKRAADLLSRAEYLFYQQR 3
NY I++R A + Q S+ EA R +L++AE F+ Q+
Sbjct: 297 NYSDIEKRVSEAHAIVLHRQRITLTNPSVVHATLELEATRKWQILAKAEESFFCQK 352
>emb|CAA66812.1| non-ltr retrotransposon reverse transcriptase-like protein
[Arabidopsis thaliana]
Length = 893
Score = 58.9 bits (141), Expect = 7e-07
Identities = 51/176 (28%), Positives = 79/176 (44%), Gaps = 10/176 (5%)
Frame = -1
Query: 500 FTWTNG----RVVCKLDRAMVNKIWLEQDRSAFAEFRPPGIYSDHASCIV----SILEPR 345
+TW N + K+DR +VN W SA+A F P +SDH+SC V ++L+ +
Sbjct: 185 YTWWNKCSSRPLAKKIDRILVNDHWNTLFPSAYANFGEPD-FSDHSSCEVVLDPAVLKAK 243
Query: 344 RPQTKSFKFFNMWTTHHDFNRLVQENWTLADSMIRDGVCQFXXXXXXXXXXXXXXXXXKE 165
RP F+FFN + + DF +L++ENW S G + +E
Sbjct: 244 RP----FRFFNYFLHNPDFLQLIRENWY---SCNVSGSAMYRVSKKLKHLKLPICCFSRE 296
Query: 164 NYHHIQERAKRAQIHLDEVQERVFAQGSLDEE--YKEAKRAADLLSRAEYLFYQQR 3
NY I++R A + Q S+ EA R +L++AE F+ Q+
Sbjct: 297 NYSDIEKRVSEAHAIVLHRQRITLTNPSVVHATLELEATRKWQILAKAEESFFCQK 352
>gb|EOY07958.1| Uncharacterized protein TCM_022291 [Theobroma cacao]
Length = 583
Score = 57.8 bits (138), Expect = 1e-06
Identities = 29/82 (35%), Positives = 40/82 (48%), Gaps = 1/82 (1%)
Frame = -1
Query: 500 FTWTNGRVVCKLDRAMVNKIWLEQ-DRSAFAEFRPPGIYSDHASCIVSILEPRRPQTKSF 324
+TWTN + +LDR + N WLE + G SDH +VS + SF
Sbjct: 451 YTWTNSHMFQRLDRVVYNHQWLEYLTITRVQHLNRDG--SDHCLLLVSCSKSLEKSPSSF 508
Query: 323 KFFNMWTTHHDFNRLVQENWTL 258
+F + W HHDF + V+ NW L
Sbjct: 509 RFLHAWVQHHDFKKFVEANWKL 530
>ref|XP_006380103.1| hypothetical protein POPTR_0008s21940g, partial [Populus
trichocarpa] gi|550333624|gb|ERP57900.1| hypothetical
protein POPTR_0008s21940g, partial [Populus trichocarpa]
Length = 818
Score = 57.4 bits (137), Expect = 2e-06
Identities = 27/81 (33%), Positives = 40/81 (49%)
Frame = -1
Query: 500 FTWTNGRVVCKLDRAMVNKIWLEQDRSAFAEFRPPGIYSDHASCIVSILEPRRPQTKSFK 321
+TW+NG V K+DR + + F+PPG +S H+ + I P + FK
Sbjct: 702 YTWSNGTVWTKIDRLITH-----------VHFQPPGAFSGHSGAHIRIGGNYPPGCRPFK 750
Query: 320 FFNMWTTHHDFNRLVQENWTL 258
FFNMW H + L+ + W L
Sbjct: 751 FFNMWVDHPQYAGLISDGWQL 771
>ref|NP_174931.1| DNAse I-like superfamily protein [Arabidopsis thaliana]
gi|332193787|gb|AEE31908.1| DNAse I-like superfamily
protein [Arabidopsis thaliana]
Length = 426
Score = 57.4 bits (137), Expect = 2e-06
Identities = 34/84 (40%), Positives = 49/84 (58%), Gaps = 5/84 (5%)
Frame = -1
Query: 500 FTWTNGR----VVCKLDRAMVNKIWLEQDRSAFAEFRPPGIYSDHASCIVSI-LEPRRPQ 336
+TW+N + ++ KLDRA+VN WL +A A F PP SDHA+C+V + P +
Sbjct: 172 YTWSNHQQDNPILRKLDRAIVNGCWLATFPTASAIFDPPS-DSDHAACMVILNNSPPLSK 230
Query: 335 TKSFKFFNMWTTHHDFNRLVQENW 264
KSFK+F+ +TH DF + W
Sbjct: 231 KKSFKYFSFLSTHPDFISSILAAW 254
>gb|EOY25454.1| Uncharacterized protein TCM_026877 [Theobroma cacao]
Length = 2367
Score = 57.0 bits (136), Expect = 3e-06
Identities = 28/82 (34%), Positives = 39/82 (47%), Gaps = 1/82 (1%)
Frame = -1
Query: 500 FTWTNGRVVCKLDRAMVNKIWLEQ-DRSAFAEFRPPGIYSDHASCIVSILEPRRPQTKSF 324
FTWTN R+ +LDR + N W+ + + G SDH ++S SF
Sbjct: 1233 FTWTNNRMFQRLDRIVYNHHWINKFPITRIQHLNRDG--SDHCPLLISCFNSSEKAPSSF 1290
Query: 323 KFFNMWTTHHDFNRLVQENWTL 258
+F + W HHDF V+ NW L
Sbjct: 1291 RFQHAWVLHHDFKTSVESNWNL 1312
>gb|EOY17514.1| Uncharacterized protein TCM_042330 [Theobroma cacao]
Length = 2249
Score = 57.0 bits (136), Expect = 3e-06
Identities = 28/82 (34%), Positives = 39/82 (47%), Gaps = 1/82 (1%)
Frame = -1
Query: 500 FTWTNGRVVCKLDRAMVNKIWLEQ-DRSAFAEFRPPGIYSDHASCIVSILEPRRPQTKSF 324
FTWTN R+ +LDR + N W+ + + G SDH ++S SF
Sbjct: 1061 FTWTNNRMFQRLDRIVYNHHWINKFPVTRIQHLNRDG--SDHCPLLISCFNSSEKAPSSF 1118
Query: 323 KFFNMWTTHHDFNRLVQENWTL 258
+F + W HHDF V+ NW L
Sbjct: 1119 RFQHAWVLHHDFKTSVESNWNL 1140
>gb|EOY17513.1| Uncharacterized protein TCM_036737 [Theobroma cacao]
Length = 2215
Score = 57.0 bits (136), Expect = 3e-06
Identities = 28/82 (34%), Positives = 41/82 (50%), Gaps = 1/82 (1%)
Frame = -1
Query: 500 FTWTNGRVVCKLDRAMVNKIWLEQ-DRSAFAEFRPPGIYSDHASCIVSILEPRRPQTKSF 324
FTWTN R+ +LDR + N+ W+ + + G SDH ++S SF
Sbjct: 1026 FTWTNNRMFQRLDRMVYNQQWINKFPITRIQHLNRDG--SDHCPLLLSCSNSSEKAPSSF 1083
Query: 323 KFFNMWTTHHDFNRLVQENWTL 258
+F + W HH+FN V+ NW L
Sbjct: 1084 RFLHAWALHHNFNASVEGNWNL 1105
>ref|XP_004253295.1| PREDICTED: uncharacterized protein LOC101253072 [Solanum
lycopersicum]
Length = 383
Score = 57.0 bits (136), Expect = 3e-06
Identities = 28/84 (33%), Positives = 47/84 (55%), Gaps = 5/84 (5%)
Frame = -1
Query: 500 FTWTNG-----RVVCKLDRAMVNKIWLEQDRSAFAEFRPPGIYSDHASCIVSILEPRRPQ 336
+TW N R+ ++DRA N W+++ E+ P I SDH+S ++++ + ++
Sbjct: 172 YTWNNKQCGMYRISSRIDRAFGNDEWMDKWGHVMVEYGNPSI-SDHSSMMLTLQKTQQYV 230
Query: 335 TKSFKFFNMWTTHHDFNRLVQENW 264
SFKFFN+WT H F +V+ W
Sbjct: 231 KCSFKFFNVWTEHERFMEIVENAW 254
>ref|XP_004244885.1| PREDICTED: uncharacterized protein LOC101261435 [Solanum
lycopersicum]
Length = 259
Score = 57.0 bits (136), Expect = 3e-06
Identities = 28/84 (33%), Positives = 47/84 (55%), Gaps = 5/84 (5%)
Frame = -1
Query: 500 FTWTN-----GRVVCKLDRAMVNKIWLEQDRSAFAEFRPPGIYSDHASCIVSILEPRRPQ 336
+TW+N RV+ ++DRA N W+++ E+ PG+ SDH++ + + + +
Sbjct: 57 YTWSNKQIGNARVLSRIDRAFGNDEWMDKWAHVILEYGNPGV-SDHSTMQLVLHQSNQHV 115
Query: 335 TKSFKFFNMWTTHHDFNRLVQENW 264
SFKFFN+W H F LV++ W
Sbjct: 116 RASFKFFNIWIEHESFLGLVEQVW 139
>ref|XP_002331338.1| predicted protein [Populus trichocarpa]
Length = 819
Score = 57.0 bits (136), Expect = 3e-06
Identities = 29/83 (34%), Positives = 49/83 (59%), Gaps = 4/83 (4%)
Frame = -1
Query: 500 FTWTN----GRVVCKLDRAMVNKIWLEQDRSAFAEFRPPGIYSDHASCIVSILEPRRPQT 333
+TW+N ++ KLDR +VN+ W + + A F P G+ SDH+ +V ++ + +
Sbjct: 561 YTWSNQCPENLIMRKLDRVLVNEKWNLKFPLSEARFLPSGM-SDHSPMVVKVIGNDQNKK 619
Query: 332 KSFKFFNMWTTHHDFNRLVQENW 264
K F+FF+MW H +F LV++ W
Sbjct: 620 KPFRFFDMWMDHDEFMPLVKKVW 642
>ref|XP_004239563.1| PREDICTED: uncharacterized protein LOC101259634 [Solanum
lycopersicum]
Length = 425
Score = 56.6 bits (135), Expect = 3e-06
Identities = 27/75 (36%), Positives = 42/75 (56%)
Frame = -1
Query: 488 NGRVVCKLDRAMVNKIWLEQDRSAFAEFRPPGIYSDHASCIVSILEPRRPQTKSFKFFNM 309
N R+ ++DRA N W+++ E+ PG+ SDH+S + + + + SFKFFN+
Sbjct: 164 NARISSRIDRAFGNDAWMDKWGHVILEYGNPGV-SDHSSMQLLLHQNYQQVRASFKFFNV 222
Query: 308 WTTHHDFNRLVQENW 264
WT H F LV+ W
Sbjct: 223 WTEHESFLELVETVW 237
>gb|EOY02238.1| Uncharacterized protein TCM_016762 [Theobroma cacao]
Length = 2214
Score = 56.2 bits (134), Expect = 4e-06
Identities = 28/80 (35%), Positives = 42/80 (52%), Gaps = 1/80 (1%)
Frame = -1
Query: 500 FTWTNGRVVCKLDRAMVNKIWLEQDRSAFAE-FRPPGIYSDHASCIVSILEPRRPQTKSF 324
FTWTN R+ +LDR + N+ W E S + G SDH ++S + +F
Sbjct: 1027 FTWTNNRMFQRLDRVVYNQEWAEFFSSTRVQHLNRDG--SDHCPLLISCSNTNQRGPATF 1084
Query: 323 KFFNMWTTHHDFNRLVQENW 264
+F + WT HHDF V+++W
Sbjct: 1085 RFLHAWTKHHDFISFVEKSW 1104