BLASTX nr result

ID: Zingiber24_contig00034261 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00034261
         (333 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFW63275.1| hypothetical protein ZEAMMB73_841405 [Zea mays]         55   7e-06
gb|ACG25770.1| hypothetical protein [Zea mays] gi|413923342|gb|A...    55   7e-06
ref|NP_001136857.1| hypothetical protein [Zea mays] gi|194697378...    55   7e-06

>gb|AFW63275.1| hypothetical protein ZEAMMB73_841405 [Zea mays]
          Length = 92

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 31/38 (81%), Positives = 32/38 (84%), Gaps = 1/38 (2%)
 Frame = +3

Query: 219 RFSSLSRIPVELGSCVE-SLLPLHSAVAAARLTSRLST 329
           R SS SR+PVELG C   SLLPLHSAVAAARLTSRLST
Sbjct: 38  RASSFSRMPVELGCCAGLSLLPLHSAVAAARLTSRLST 75


>gb|ACG25770.1| hypothetical protein [Zea mays] gi|413923342|gb|AFW63274.1|
           hypothetical protein ZEAMMB73_841405 [Zea mays]
          Length = 90

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 31/38 (81%), Positives = 32/38 (84%), Gaps = 1/38 (2%)
 Frame = +3

Query: 219 RFSSLSRIPVELGSCVE-SLLPLHSAVAAARLTSRLST 329
           R SS SR+PVELG C   SLLPLHSAVAAARLTSRLST
Sbjct: 38  RASSFSRMPVELGCCAGLSLLPLHSAVAAARLTSRLST 75


>ref|NP_001136857.1| hypothetical protein [Zea mays] gi|194697378|gb|ACF82773.1| unknown
           [Zea mays] gi|195653989|gb|ACG46462.1| hypothetical
           protein [Zea mays] gi|413923344|gb|AFW63276.1|
           hypothetical protein ZEAMMB73_841405 [Zea mays]
           gi|413923345|gb|AFW63277.1| hypothetical protein
           ZEAMMB73_841405 [Zea mays]
          Length = 94

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 31/38 (81%), Positives = 32/38 (84%), Gaps = 1/38 (2%)
 Frame = +3

Query: 219 RFSSLSRIPVELGSCVE-SLLPLHSAVAAARLTSRLST 329
           R SS SR+PVELG C   SLLPLHSAVAAARLTSRLST
Sbjct: 38  RASSFSRMPVELGCCAGLSLLPLHSAVAAARLTSRLST 75


Top