BLASTX nr result

ID: Zingiber24_contig00034230 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00034230
         (237 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABF69983.1| zinc finger (C3HC4 type RING finger) family prote...    91   1e-16
gb|AFW69000.1| hypothetical protein ZEAMMB73_653206 [Zea mays]         60   2e-07
ref|NP_001159170.1| hypothetical protein [Zea mays] gi|223942439...    60   2e-07
ref|XP_002437443.1| hypothetical protein SORBIDRAFT_10g027165 [S...    60   3e-07
gb|EEC81174.1| hypothetical protein OsI_24153 [Oryza sativa Indi...    58   1e-06
ref|XP_006656375.1| PREDICTED: uncharacterized protein LOC102711...    58   1e-06
gb|EXC35018.1| putative E3 ubiquitin-protein ligase MARCH10 [Mor...    57   2e-06
ref|NP_001058355.2| Os06g0677300 [Oryza sativa Japonica Group] g...    57   2e-06
gb|EEE66215.1| hypothetical protein OsJ_22354 [Oryza sativa Japo...    57   2e-06
ref|XP_004966202.1| PREDICTED: uncharacterized protein LOC101763...    57   3e-06
ref|XP_006648345.1| PREDICTED: uncharacterized protein LOC102716...    56   4e-06
ref|XP_003633259.1| PREDICTED: uncharacterized protein LOC100243...    56   4e-06
emb|CBI22058.3| unnamed protein product [Vitis vinifera]               56   4e-06
ref|NP_001045994.1| Os02g0165000 [Oryza sativa Japonica Group] g...    56   6e-06

>gb|ABF69983.1| zinc finger (C3HC4 type RING finger) family protein [Musa
           acuminata]
          Length = 297

 Score = 91.3 bits (225), Expect = 1e-16
 Identities = 44/71 (61%), Positives = 57/71 (80%), Gaps = 1/71 (1%)
 Frame = +3

Query: 3   FTGFGISISMNSLLIEYLRWRARRNLR-STQLNQSQQQNEARNLAGVEDGGDTRQQDLEN 179
           FTGFGI+IS N+ L+EYLRWRARRNLR + Q + ++QQ E+RNL  VE+GG+ RQ + EN
Sbjct: 227 FTGFGIAISTNASLVEYLRWRARRNLRLAQQQSDNRQQQESRNLPDVENGGNVRQHESEN 286

Query: 180 QIQDPNPLQHG 212
           QIQ+P+P Q G
Sbjct: 287 QIQNPDPSQQG 297


>gb|AFW69000.1| hypothetical protein ZEAMMB73_653206 [Zea mays]
          Length = 549

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 35/65 (53%), Positives = 40/65 (61%)
 Frame = +3

Query: 3   FTGFGISISMNSLLIEYLRWRARRNLRSTQLNQSQQQNEARNLAGVEDGGDTRQQDLENQ 182
           FTGFGI+IS NSLL+EYLRWRARRN R  Q    Q  N A++     DGG+    D   Q
Sbjct: 485 FTGFGIAISTNSLLVEYLRWRARRNQRLAQ----QAANAAQHQESGNDGGN--DNDDAQQ 538

Query: 183 IQDPN 197
             DPN
Sbjct: 539 GHDPN 543


>ref|NP_001159170.1| hypothetical protein [Zea mays] gi|223942439|gb|ACN25303.1| unknown
           [Zea mays] gi|413934450|gb|AFW69001.1| hypothetical
           protein ZEAMMB73_653206 [Zea mays]
          Length = 482

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 35/65 (53%), Positives = 40/65 (61%)
 Frame = +3

Query: 3   FTGFGISISMNSLLIEYLRWRARRNLRSTQLNQSQQQNEARNLAGVEDGGDTRQQDLENQ 182
           FTGFGI+IS NSLL+EYLRWRARRN R  Q    Q  N A++     DGG+    D   Q
Sbjct: 418 FTGFGIAISTNSLLVEYLRWRARRNQRLAQ----QAANAAQHQESGNDGGN--DNDDAQQ 471

Query: 183 IQDPN 197
             DPN
Sbjct: 472 GHDPN 476


>ref|XP_002437443.1| hypothetical protein SORBIDRAFT_10g027165 [Sorghum bicolor]
           gi|241915666|gb|EER88810.1| hypothetical protein
           SORBIDRAFT_10g027165 [Sorghum bicolor]
          Length = 483

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 30/55 (54%), Positives = 35/55 (63%)
 Frame = +3

Query: 3   FTGFGISISMNSLLIEYLRWRARRNLRSTQLNQSQQQNEARNLAGVEDGGDTRQQ 167
           FTGFGI+IS NSLL+EYLRWRARRN R  Q   +  Q++     G  D    RQQ
Sbjct: 418 FTGFGIAISTNSLLVEYLRWRARRNHRLAQQAANAAQHQESGNDGANDNDGARQQ 472


>gb|EEC81174.1| hypothetical protein OsI_24153 [Oryza sativa Indica Group]
          Length = 490

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 28/54 (51%), Positives = 37/54 (68%)
 Frame = +3

Query: 3   FTGFGISISMNSLLIEYLRWRARRNLRSTQLNQSQQQNEARNLAGVEDGGDTRQ 164
           FTGFGI+IS NS+L+EYLRWR+RRN +  Q     Q+ E  + A  E+ GD +Q
Sbjct: 419 FTGFGIAISANSMLVEYLRWRSRRNQQLAQTVDDGQRQEPESNAVNENNGDRQQ 472


>ref|XP_006656375.1| PREDICTED: uncharacterized protein LOC102711268 [Oryza brachyantha]
          Length = 482

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 28/55 (50%), Positives = 38/55 (69%)
 Frame = +3

Query: 3   FTGFGISISMNSLLIEYLRWRARRNLRSTQLNQSQQQNEARNLAGVEDGGDTRQQ 167
           FTGFGI+IS NS+L+EYLRWR+RRN +  Q     Q+ E  + A  E+ GD +Q+
Sbjct: 418 FTGFGIAISANSMLVEYLRWRSRRNQQLAQSVNDGQRQEPASDAVSENNGDRQQR 472


>gb|EXC35018.1| putative E3 ubiquitin-protein ligase MARCH10 [Morus notabilis]
          Length = 497

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 37/93 (39%), Positives = 47/93 (50%), Gaps = 17/93 (18%)
 Frame = +3

Query: 3   FTGFGISISMNSLLIEYLRWRARRNLRST-----------------QLNQSQQQNEARNL 131
           FTGFGI+IS N+LL+EYLRWR  R L+ST                 Q  Q Q+Q +  +L
Sbjct: 405 FTGFGIAISTNTLLVEYLRWRTNRQLQSTRQQIEIALQQQQQIHHQQQQQHQEQYQHHHL 464

Query: 132 AGVEDGGDTRQQDLENQIQDPNPLQHGQNHS*R 230
             + +    +QQ  EN    PNP   G  HS R
Sbjct: 465 QPLSENPQQQQQQFEN----PNP---GPTHSSR 490


>ref|NP_001058355.2| Os06g0677300 [Oryza sativa Japonica Group]
           gi|52076620|dbj|BAD45521.1| zinc finger (C3HC4-type RING
           finger) protein-like [Oryza sativa Japonica Group]
           gi|52076906|dbj|BAD45918.1| zinc finger (C3HC4-type RING
           finger) protein-like [Oryza sativa Japonica Group]
           gi|215713466|dbj|BAG94603.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|255677320|dbj|BAF20269.2| Os06g0677300 [Oryza sativa
           Japonica Group]
          Length = 483

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 28/54 (51%), Positives = 37/54 (68%)
 Frame = +3

Query: 3   FTGFGISISMNSLLIEYLRWRARRNLRSTQLNQSQQQNEARNLAGVEDGGDTRQ 164
           FTGFGI+IS NS+L+EYLRWR+RRN +  Q     Q+ E  + A  E+ GD +Q
Sbjct: 419 FTGFGIAISANSMLVEYLRWRSRRNQQLAQTVDDGQRQEPGSNAVNENNGDRQQ 472


>gb|EEE66215.1| hypothetical protein OsJ_22354 [Oryza sativa Japonica Group]
          Length = 791

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 28/54 (51%), Positives = 37/54 (68%)
 Frame = +3

Query: 3   FTGFGISISMNSLLIEYLRWRARRNLRSTQLNQSQQQNEARNLAGVEDGGDTRQ 164
           FTGFGI+IS NS+L+EYLRWR+RRN +  Q     Q+ E  + A  E+ GD +Q
Sbjct: 419 FTGFGIAISANSMLVEYLRWRSRRNQQLAQTVDDGQRQEPGSNAVNENNGDRQQ 472


>ref|XP_004966202.1| PREDICTED: uncharacterized protein LOC101763665 [Setaria italica]
          Length = 483

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 31/65 (47%), Positives = 36/65 (55%)
 Frame = +3

Query: 3   FTGFGISISMNSLLIEYLRWRARRNLRSTQLNQSQQQNEARNLAGVEDGGDTRQQDLENQ 182
           FTGFGI+IS NSLL+EY+RWRARRN R  Q   +  Q+         D    RQQ     
Sbjct: 418 FTGFGIAISTNSLLVEYMRWRARRNQRLAQQAVNAAQHPESGSNDANDNNGDRQQG---- 473

Query: 183 IQDPN 197
             DPN
Sbjct: 474 -HDPN 477


>ref|XP_006648345.1| PREDICTED: uncharacterized protein LOC102716758 [Oryza brachyantha]
          Length = 470

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 28/70 (40%), Positives = 39/70 (55%)
 Frame = +3

Query: 3   FTGFGISISMNSLLIEYLRWRARRNLRSTQLNQSQQQNEARNLAGVEDGGDTRQQDLENQ 182
           FTGFGI+IS+N++LIE+ RWR+ RN +STQ   ++      N +        RQQ     
Sbjct: 404 FTGFGIAISLNAMLIEFQRWRSLRNQQSTQHRNNRHGQSGNNASNENTASSARQQ---GS 460

Query: 183 IQDPNPLQHG 212
             D  P +HG
Sbjct: 461 GSDQQPQEHG 470


>ref|XP_003633259.1| PREDICTED: uncharacterized protein LOC100243829 [Vitis vinifera]
          Length = 522

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 31/68 (45%), Positives = 39/68 (57%)
 Frame = +3

Query: 3   FTGFGISISMNSLLIEYLRWRARRNLRSTQLNQSQQQNEARNLAGVEDGGDTRQQDLENQ 182
           FTGFGI+IS NSLL+EYLRWRA R +RS+  N    Q   R+          +QQ  + Q
Sbjct: 431 FTGFGIAISTNSLLVEYLRWRASRQVRSSDQNNRGVQQPQRHHHHHHHHHQWQQQQQQQQ 490

Query: 183 IQDPNPLQ 206
            Q  + LQ
Sbjct: 491 QQHQHQLQ 498


>emb|CBI22058.3| unnamed protein product [Vitis vinifera]
          Length = 521

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 31/68 (45%), Positives = 39/68 (57%)
 Frame = +3

Query: 3   FTGFGISISMNSLLIEYLRWRARRNLRSTQLNQSQQQNEARNLAGVEDGGDTRQQDLENQ 182
           FTGFGI+IS NSLL+EYLRWRA R +RS+  N    Q   R+          +QQ  + Q
Sbjct: 430 FTGFGIAISTNSLLVEYLRWRASRQVRSSDQNNRGVQQPQRHHHHHHHHHQWQQQQQQQQ 489

Query: 183 IQDPNPLQ 206
            Q  + LQ
Sbjct: 490 QQHQHQLQ 497


>ref|NP_001045994.1| Os02g0165000 [Oryza sativa Japonica Group]
           gi|49388056|dbj|BAD25170.1| zinc finger (C3HC4-type RING
           finger) protein-like [Oryza sativa Japonica Group]
           gi|49388413|dbj|BAD25546.1| zinc finger (C3HC4-type RING
           finger) protein-like [Oryza sativa Japonica Group]
           gi|113535525|dbj|BAF07908.1| Os02g0165000 [Oryza sativa
           Japonica Group] gi|215697496|dbj|BAG91490.1| unnamed
           protein product [Oryza sativa Japonica Group]
           gi|218190127|gb|EEC72554.1| hypothetical protein
           OsI_05980 [Oryza sativa Indica Group]
           gi|222622238|gb|EEE56370.1| hypothetical protein
           OsJ_05507 [Oryza sativa Japonica Group]
          Length = 487

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 29/70 (41%), Positives = 37/70 (52%)
 Frame = +3

Query: 3   FTGFGISISMNSLLIEYLRWRARRNLRSTQLNQSQQQNEARNLAGVEDGGDTRQQDLENQ 182
           FTGFGI+IS+N++LIEYLRWR  RN R TQ    +      N +      + RQQ     
Sbjct: 421 FTGFGIAISLNAMLIEYLRWRLLRNQRLTQRRNHRHGQSGNNASNENTASNARQQ---GS 477

Query: 183 IQDPNPLQHG 212
             D    +HG
Sbjct: 478 GSDQQSAEHG 487


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