BLASTX nr result
ID: Zingiber24_contig00034166
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00034166
(287 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EMJ26403.1| hypothetical protein PRUPE_ppa002057mg [Prunus pe... 87 2e-15
emb|CBI17913.3| unnamed protein product [Vitis vinifera] 83 3e-14
ref|XP_002263967.1| PREDICTED: DNA ligase 4-like [Vitis vinifera] 83 3e-14
gb|EXC31206.1| DNA ligase 4 [Morus notabilis] 80 2e-13
gb|EOY32048.1| DNA ligase IV [Theobroma cacao] 77 3e-12
ref|XP_002534602.1| conserved hypothetical protein [Ricinus comm... 73 4e-11
ref|XP_004487997.1| PREDICTED: DNA ligase 4-like [Cicer arietinum] 69 6e-10
ref|XP_006597804.1| PREDICTED: DNA ligase 4-like isoform X5 [Gly... 69 8e-10
ref|XP_006597803.1| PREDICTED: DNA ligase 4-like isoform X4 [Gly... 69 8e-10
ref|XP_006597802.1| PREDICTED: DNA ligase 4-like isoform X3 [Gly... 69 8e-10
ref|XP_006597801.1| PREDICTED: DNA ligase 4-like isoform X2 [Gly... 69 8e-10
ref|XP_003546435.1| PREDICTED: DNA ligase 4-like isoform X1 [Gly... 69 8e-10
ref|XP_004978220.1| PREDICTED: LOW QUALITY PROTEIN: putative DNA... 67 2e-09
ref|XP_004242917.1| PREDICTED: DNA ligase 4-like [Solanum lycope... 67 2e-09
tpg|DAA36121.1| TPA: hypothetical protein ZEAMMB73_820524 [Zea m... 65 7e-09
ref|XP_006344528.1| PREDICTED: DNA ligase 4-like isoform X3 [Sol... 65 9e-09
ref|XP_006344527.1| PREDICTED: DNA ligase 4-like isoform X2 [Sol... 65 9e-09
ref|XP_006344526.1| PREDICTED: DNA ligase 4-like isoform X1 [Sol... 65 9e-09
ref|XP_002448485.1| hypothetical protein SORBIDRAFT_06g027820 [S... 65 1e-08
ref|XP_004165348.1| PREDICTED: LOW QUALITY PROTEIN: DNA ligase 4... 63 3e-08
>gb|EMJ26403.1| hypothetical protein PRUPE_ppa002057mg [Prunus persica]
Length = 723
Score = 87.4 bits (215), Expect = 2e-15
Identities = 41/70 (58%), Positives = 56/70 (80%)
Frame = +1
Query: 61 NSGQHEKLEQMADPLHAILLDMIPSLSQRKVEGESSAVEGKIPQIDNDANPVKKKKLSYK 240
+SG+ EKLE MADP+ A+L DMIPSL+ +KVE ++++E + P +D +A P KKKK+SYK
Sbjct: 654 DSGKPEKLEVMADPVQAMLFDMIPSLAMKKVETTNTSIEKEKPAVDLNAGPSKKKKVSYK 713
Query: 241 EVAGHLLKDW 270
+VAG LLKDW
Sbjct: 714 DVAGELLKDW 723
>emb|CBI17913.3| unnamed protein product [Vitis vinifera]
Length = 1163
Score = 83.2 bits (204), Expect = 3e-14
Identities = 42/78 (53%), Positives = 55/78 (70%)
Frame = +1
Query: 37 ENKPELDVNSGQHEKLEQMADPLHAILLDMIPSLSQRKVEGESSAVEGKIPQIDNDANPV 216
ENK + NS + EKLE M DP+ A+LLDMIPSL +K E + ++ + P ++ A PV
Sbjct: 1089 ENKVD---NSKKTEKLEVMVDPVQAMLLDMIPSLGVKKAESTNPIIDDEKPPVEQGAEPV 1145
Query: 217 KKKKLSYKEVAGHLLKDW 270
KKKK+SYK+VAG LLKDW
Sbjct: 1146 KKKKVSYKDVAGALLKDW 1163
>ref|XP_002263967.1| PREDICTED: DNA ligase 4-like [Vitis vinifera]
Length = 1162
Score = 83.2 bits (204), Expect = 3e-14
Identities = 42/78 (53%), Positives = 55/78 (70%)
Frame = +1
Query: 37 ENKPELDVNSGQHEKLEQMADPLHAILLDMIPSLSQRKVEGESSAVEGKIPQIDNDANPV 216
ENK + NS + EKLE M DP+ A+LLDMIPSL +K E + ++ + P ++ A PV
Sbjct: 1088 ENKVD---NSKKTEKLEVMVDPVQAMLLDMIPSLGVKKAESTNPIIDDEKPPVEQGAEPV 1144
Query: 217 KKKKLSYKEVAGHLLKDW 270
KKKK+SYK+VAG LLKDW
Sbjct: 1145 KKKKVSYKDVAGALLKDW 1162
>gb|EXC31206.1| DNA ligase 4 [Morus notabilis]
Length = 821
Score = 80.5 bits (197), Expect = 2e-13
Identities = 43/87 (49%), Positives = 57/87 (65%)
Frame = +1
Query: 10 ELINKQDSVENKPELDVNSGQHEKLEQMADPLHAILLDMIPSLSQRKVEGESSAVEGKIP 189
E KQ+S ++P EKLE M DP+HA+LLDMIP L + KVE +++ E K P
Sbjct: 739 ETSEKQNSENSQPP----PPPPEKLELMTDPVHAMLLDMIPRLGKEKVEITNTSTEDKKP 794
Query: 190 QIDNDANPVKKKKLSYKEVAGHLLKDW 270
+D +A KKKK+SYK++AG LLKDW
Sbjct: 795 AVDPNAPQPKKKKVSYKDIAGDLLKDW 821
>gb|EOY32048.1| DNA ligase IV [Theobroma cacao]
Length = 1195
Score = 76.6 bits (187), Expect = 3e-12
Identities = 46/95 (48%), Positives = 56/95 (58%), Gaps = 18/95 (18%)
Frame = +1
Query: 40 NKPELDVNS--GQHEKLEQMADPLHAILLDMIPSLSQRKVEGESSAVEGKIPQIDNDAN- 210
N ELD + + EKLE M DP+ A+LLDMIPSL + VE +S VE + P DN+A
Sbjct: 1101 NLMELDQENCGAKSEKLEVMVDPVQAMLLDMIPSLGIKHVEATNSFVENEKPPADNNAEI 1160
Query: 211 ---------------PVKKKKLSYKEVAGHLLKDW 270
PVKKKK+SYK+VAG LLKDW
Sbjct: 1161 PVVEDYKLDADFIAPPVKKKKVSYKDVAGELLKDW 1195
>ref|XP_002534602.1| conserved hypothetical protein [Ricinus communis]
gi|223524943|gb|EEF27780.1| conserved hypothetical
protein [Ricinus communis]
Length = 251
Score = 72.8 bits (177), Expect = 4e-11
Identities = 37/64 (57%), Positives = 45/64 (70%)
Frame = +1
Query: 76 EKLEQMADPLHAILLDMIPSLSQRKVEGESSAVEGKIPQIDNDANPVKKKKLSYKEVAGH 255
+KLE M DP+HA+LLDMIPSL R VE + E + P D A PVKKKK+SYK+VA
Sbjct: 188 DKLEIMVDPIHAMLLDMIPSLGVRNVEISNQVFEREKPAGDPTAQPVKKKKVSYKDVASE 247
Query: 256 LLKD 267
+LKD
Sbjct: 248 MLKD 251
>ref|XP_004487997.1| PREDICTED: DNA ligase 4-like [Cicer arietinum]
Length = 1168
Score = 68.9 bits (167), Expect = 6e-10
Identities = 40/75 (53%), Positives = 50/75 (66%), Gaps = 3/75 (4%)
Frame = +1
Query: 55 DVNSGQHEKLEQMADPLHAILLDMIPSLSQRKVEG--ESSAVEGKIPQIDN-DANPVKKK 225
D NS EKLE + DP+ A+LLDMIPSL+ KVE S E K P+I N + + KKK
Sbjct: 1094 DENSHVTEKLEILTDPVQAMLLDMIPSLATEKVEQPLNSYVEEEKPPEISNEEPSTSKKK 1153
Query: 226 KLSYKEVAGHLLKDW 270
K+S+K +AG LLKDW
Sbjct: 1154 KVSFKAIAGDLLKDW 1168
>ref|XP_006597804.1| PREDICTED: DNA ligase 4-like isoform X5 [Glycine max]
Length = 939
Score = 68.6 bits (166), Expect = 8e-10
Identities = 41/75 (54%), Positives = 51/75 (68%), Gaps = 5/75 (6%)
Frame = +1
Query: 61 NSGQHEKLEQMADPLHAILLDMIPSLSQRKVEG--ESSAVEGKIPQIDN-DANPV--KKK 225
N+ EKLE ADPL A+L DMIPSL+ +KVE S E K+P+ N +A P+ KKK
Sbjct: 865 NNEVTEKLEISADPLQAMLFDMIPSLATQKVEQPMNRSVREEKLPETSNAEAEPMTTKKK 924
Query: 226 KLSYKEVAGHLLKDW 270
K+SYK+VA LLKDW
Sbjct: 925 KVSYKDVASELLKDW 939
>ref|XP_006597803.1| PREDICTED: DNA ligase 4-like isoform X4 [Glycine max]
Length = 955
Score = 68.6 bits (166), Expect = 8e-10
Identities = 41/75 (54%), Positives = 51/75 (68%), Gaps = 5/75 (6%)
Frame = +1
Query: 61 NSGQHEKLEQMADPLHAILLDMIPSLSQRKVEG--ESSAVEGKIPQIDN-DANPV--KKK 225
N+ EKLE ADPL A+L DMIPSL+ +KVE S E K+P+ N +A P+ KKK
Sbjct: 881 NNEVTEKLEISADPLQAMLFDMIPSLATQKVEQPMNRSVREEKLPETSNAEAEPMTTKKK 940
Query: 226 KLSYKEVAGHLLKDW 270
K+SYK+VA LLKDW
Sbjct: 941 KVSYKDVASELLKDW 955
>ref|XP_006597802.1| PREDICTED: DNA ligase 4-like isoform X3 [Glycine max]
Length = 1011
Score = 68.6 bits (166), Expect = 8e-10
Identities = 41/75 (54%), Positives = 51/75 (68%), Gaps = 5/75 (6%)
Frame = +1
Query: 61 NSGQHEKLEQMADPLHAILLDMIPSLSQRKVEG--ESSAVEGKIPQIDN-DANPV--KKK 225
N+ EKLE ADPL A+L DMIPSL+ +KVE S E K+P+ N +A P+ KKK
Sbjct: 937 NNEVTEKLEISADPLQAMLFDMIPSLATQKVEQPMNRSVREEKLPETSNAEAEPMTTKKK 996
Query: 226 KLSYKEVAGHLLKDW 270
K+SYK+VA LLKDW
Sbjct: 997 KVSYKDVASELLKDW 1011
>ref|XP_006597801.1| PREDICTED: DNA ligase 4-like isoform X2 [Glycine max]
Length = 1104
Score = 68.6 bits (166), Expect = 8e-10
Identities = 41/75 (54%), Positives = 51/75 (68%), Gaps = 5/75 (6%)
Frame = +1
Query: 61 NSGQHEKLEQMADPLHAILLDMIPSLSQRKVEG--ESSAVEGKIPQIDN-DANPV--KKK 225
N+ EKLE ADPL A+L DMIPSL+ +KVE S E K+P+ N +A P+ KKK
Sbjct: 1030 NNEVTEKLEISADPLQAMLFDMIPSLATQKVEQPMNRSVREEKLPETSNAEAEPMTTKKK 1089
Query: 226 KLSYKEVAGHLLKDW 270
K+SYK+VA LLKDW
Sbjct: 1090 KVSYKDVASELLKDW 1104
>ref|XP_003546435.1| PREDICTED: DNA ligase 4-like isoform X1 [Glycine max]
Length = 1171
Score = 68.6 bits (166), Expect = 8e-10
Identities = 41/75 (54%), Positives = 51/75 (68%), Gaps = 5/75 (6%)
Frame = +1
Query: 61 NSGQHEKLEQMADPLHAILLDMIPSLSQRKVEG--ESSAVEGKIPQIDN-DANPV--KKK 225
N+ EKLE ADPL A+L DMIPSL+ +KVE S E K+P+ N +A P+ KKK
Sbjct: 1097 NNEVTEKLEISADPLQAMLFDMIPSLATQKVEQPMNRSVREEKLPETSNAEAEPMTTKKK 1156
Query: 226 KLSYKEVAGHLLKDW 270
K+SYK+VA LLKDW
Sbjct: 1157 KVSYKDVASELLKDW 1171
>ref|XP_004978220.1| PREDICTED: LOW QUALITY PROTEIN: putative DNA ligase 4-like [Setaria
italica]
Length = 1241
Score = 67.4 bits (163), Expect = 2e-09
Identities = 42/94 (44%), Positives = 50/94 (53%), Gaps = 29/94 (30%)
Frame = +1
Query: 76 EKLEQMADPLHAILLDMIPSLSQRKVEGES-----SAVEGKIPQI--------------- 195
EK+EQM DPLHA+LLDMIP+LSQ + EG S + VE P +
Sbjct: 1148 EKIEQMVDPLHAMLLDMIPTLSQTRTEGASRVPPPTIVEKAPPGVGSNTSKSSDILVPDA 1207
Query: 196 ---------DNDANPVKKKKLSYKEVAGHLLKDW 270
N A P KKKK+SYK+VA LLKDW
Sbjct: 1208 GTSGVPAPDPNAAPPPKKKKVSYKDVASELLKDW 1241
>ref|XP_004242917.1| PREDICTED: DNA ligase 4-like [Solanum lycopersicum]
Length = 1172
Score = 67.0 bits (162), Expect = 2e-09
Identities = 32/65 (49%), Positives = 41/65 (63%)
Frame = +1
Query: 76 EKLEQMADPLHAILLDMIPSLSQRKVEGESSAVEGKIPQIDNDANPVKKKKLSYKEVAGH 255
EKLE DP+ A+LL MIP L + + V+ P D + +P KKKK+SYK+VAG
Sbjct: 1108 EKLEDPVDPVQAMLLHMIPHLDSKPTRSIDTLVKDDKPDADTNPSPKKKKKISYKDVAGE 1167
Query: 256 LLKDW 270
LLKDW
Sbjct: 1168 LLKDW 1172
>tpg|DAA36121.1| TPA: hypothetical protein ZEAMMB73_820524 [Zea mays]
Length = 147
Score = 65.5 bits (158), Expect = 7e-09
Identities = 38/97 (39%), Positives = 50/97 (51%), Gaps = 26/97 (26%)
Frame = +1
Query: 58 VNSGQHEKLEQMADPLHAILLDMIPSLSQRKVEGESSAVEGK------------------ 183
++S EK+EQMADPLHA+LLDM+P L Q++ E S A K
Sbjct: 51 MSSTPGEKIEQMADPLHAMLLDMLPLLGQKRTEDTSKAPLAKAEKDPPAIGSSTSNSEIL 110
Query: 184 --------IPQIDNDANPVKKKKLSYKEVAGHLLKDW 270
+P + A P KKKK+SY++V LLKDW
Sbjct: 111 LPDAGTSGVPAPEPSAAPPKKKKVSYRDVVSELLKDW 147
>ref|XP_006344528.1| PREDICTED: DNA ligase 4-like isoform X3 [Solanum tuberosum]
Length = 1119
Score = 65.1 bits (157), Expect = 9e-09
Identities = 30/65 (46%), Positives = 42/65 (64%)
Frame = +1
Query: 76 EKLEQMADPLHAILLDMIPSLSQRKVEGESSAVEGKIPQIDNDANPVKKKKLSYKEVAGH 255
++LE DP+ A+LL MIP L + + V+ P+ D + +P KKKK+SYK+VAG
Sbjct: 1055 DELEDPVDPVQAMLLHMIPHLDSKPTRSVDTLVKDDKPEADTNPSPKKKKKVSYKDVAGE 1114
Query: 256 LLKDW 270
LLKDW
Sbjct: 1115 LLKDW 1119
>ref|XP_006344527.1| PREDICTED: DNA ligase 4-like isoform X2 [Solanum tuberosum]
Length = 1171
Score = 65.1 bits (157), Expect = 9e-09
Identities = 30/65 (46%), Positives = 42/65 (64%)
Frame = +1
Query: 76 EKLEQMADPLHAILLDMIPSLSQRKVEGESSAVEGKIPQIDNDANPVKKKKLSYKEVAGH 255
++LE DP+ A+LL MIP L + + V+ P+ D + +P KKKK+SYK+VAG
Sbjct: 1107 DELEDPVDPVQAMLLHMIPHLDSKPTRSVDTLVKDDKPEADTNPSPKKKKKVSYKDVAGE 1166
Query: 256 LLKDW 270
LLKDW
Sbjct: 1167 LLKDW 1171
>ref|XP_006344526.1| PREDICTED: DNA ligase 4-like isoform X1 [Solanum tuberosum]
Length = 1172
Score = 65.1 bits (157), Expect = 9e-09
Identities = 30/65 (46%), Positives = 42/65 (64%)
Frame = +1
Query: 76 EKLEQMADPLHAILLDMIPSLSQRKVEGESSAVEGKIPQIDNDANPVKKKKLSYKEVAGH 255
++LE DP+ A+LL MIP L + + V+ P+ D + +P KKKK+SYK+VAG
Sbjct: 1108 DELEDPVDPVQAMLLHMIPHLDSKPTRSVDTLVKDDKPEADTNPSPKKKKKVSYKDVAGE 1167
Query: 256 LLKDW 270
LLKDW
Sbjct: 1168 LLKDW 1172
>ref|XP_002448485.1| hypothetical protein SORBIDRAFT_06g027820 [Sorghum bicolor]
gi|241939668|gb|EES12813.1| hypothetical protein
SORBIDRAFT_06g027820 [Sorghum bicolor]
Length = 1164
Score = 64.7 bits (156), Expect = 1e-08
Identities = 45/119 (37%), Positives = 59/119 (49%), Gaps = 36/119 (30%)
Frame = +1
Query: 22 KQDSVENKPELD---------VNSGQHEKLEQMADPLHAILLDMIPSLSQRKVEGESSAV 174
K ++VE KP+ ++S +K+EQMADPLHA+LLDM+P L ++ E S A
Sbjct: 1046 KLNTVEEKPDSPFQRTTAAEAMSSAPGDKIEQMADPLHAMLLDMLPLLGKKGTEDASRAP 1105
Query: 175 EGK--------------------------IPQID-NDANPVKKKKLSYKEVAGHLLKDW 270
K +P D N A P KKKK+SYK+VA LLKDW
Sbjct: 1106 LPKAEKDPPAGGSSTSNSEILAPDAGTSGVPAPDPNAAPPPKKKKVSYKDVASELLKDW 1164
>ref|XP_004165348.1| PREDICTED: LOW QUALITY PROTEIN: DNA ligase 4-like, partial [Cucumis
sativus]
Length = 918
Score = 63.2 bits (152), Expect = 3e-08
Identities = 37/72 (51%), Positives = 45/72 (62%), Gaps = 7/72 (9%)
Frame = +1
Query: 76 EKLEQMADPLHAILLDMIPSL-------SQRKVEGESSAVEGKIPQIDNDANPVKKKKLS 234
EKLE M DPL A+LLDM+PSL S S+ VE K P ++N + V KKK+S
Sbjct: 848 EKLEVMKDPLEAMLLDMVPSLGMSGTKSSISSSSSSSTVVEEKKPFVENKSEAV-KKKVS 906
Query: 235 YKEVAGHLLKDW 270
YK+VA LLKDW
Sbjct: 907 YKDVASELLKDW 918