BLASTX nr result

ID: Zingiber24_contig00034157 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00034157
         (299 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002465307.1| hypothetical protein SORBIDRAFT_01g036010 [S...    61   2e-07
ref|NP_001144574.1| uncharacterized protein LOC100277584 [Zea ma...    58   1e-06
gb|EMS54871.1| hypothetical protein TRIUR3_13401 [Triticum urartu]     55   1e-05

>ref|XP_002465307.1| hypothetical protein SORBIDRAFT_01g036010 [Sorghum bicolor]
           gi|241919161|gb|EER92305.1| hypothetical protein
           SORBIDRAFT_01g036010 [Sorghum bicolor]
          Length = 545

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 35/60 (58%), Positives = 40/60 (66%), Gaps = 2/60 (3%)
 Frame = +3

Query: 126 EAVTAGMAEIDTSAPFLSVREAVDRFGGIAIWKSQL-RELFHPEKLN-YPEDANEVISME 299
           +A   G AEIDTSAPF SVREAVDRFGG A W S L R +F P K + + E A E I+ E
Sbjct: 16  DAAGGGRAEIDTSAPFESVREAVDRFGGSAAWSSDLVRRMFAPSKKHEHSEQAAEAINAE 75


>ref|NP_001144574.1| uncharacterized protein LOC100277584 [Zea mays]
           gi|194705104|gb|ACF86636.1| unknown [Zea mays]
           gi|195644052|gb|ACG41494.1| hypothetical protein [Zea
           mays] gi|413955797|gb|AFW88446.1| putative DUF827 domain
           containing family protein [Zea mays]
          Length = 545

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 33/55 (60%), Positives = 37/55 (67%), Gaps = 2/55 (3%)
 Frame = +3

Query: 141 GMAEIDTSAPFLSVREAVDRFGGIAIWKSQL-RELFHPEKLNYPED-ANEVISME 299
           G  EIDTSAPF SVREAVDRFGG A+W S L R +F P K +   D A E I+ E
Sbjct: 21  GRVEIDTSAPFESVREAVDRFGGSAVWSSDLVRRMFAPSKKHEQSDQAAEAINAE 75


>gb|EMS54871.1| hypothetical protein TRIUR3_13401 [Triticum urartu]
          Length = 604

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 31/47 (65%), Positives = 32/47 (68%), Gaps = 2/47 (4%)
 Frame = +3

Query: 129 AVTAGMAEIDTSAPFLSVREAVDRFGGIAIWKSQL--RELFHPEKLN 263
           AV  G AEIDTSAPF SVREAVDRFGG A W S L  R   H +K N
Sbjct: 30  AVGGGRAEIDTSAPFESVREAVDRFGGSAAWSSHLVNRIFAHHKKQN 76


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