BLASTX nr result
ID: Zingiber24_contig00034126
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00034126
(522 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004973815.1| PREDICTED: pentatricopeptide repeat-containi... 106 4e-21
ref|NP_001169447.1| uncharacterized protein LOC100383318 [Zea ma... 101 1e-19
ref|XP_003574702.1| PREDICTED: pentatricopeptide repeat-containi... 100 2e-19
ref|XP_002445939.1| hypothetical protein SORBIDRAFT_07g028400 [S... 100 3e-19
emb|CAJ75625.1| pentatricopeptide repeat-containing protein [Bra... 99 8e-19
ref|NP_001062150.1| Os08g0499800 [Oryza sativa Japonica Group] g... 98 1e-18
ref|XP_006659545.1| PREDICTED: pentatricopeptide repeat-containi... 92 7e-17
gb|AFW69389.1| hypothetical protein ZEAMMB73_912579 [Zea mays] 82 7e-14
gb|AFW69388.1| hypothetical protein ZEAMMB73_912579 [Zea mays] 82 7e-14
ref|XP_004152207.1| PREDICTED: pentatricopeptide repeat-containi... 74 3e-11
gb|EAZ43226.1| hypothetical protein OsJ_27826 [Oryza sativa Japo... 74 3e-11
gb|EXB67315.1| hypothetical protein L484_025797 [Morus notabilis] 73 3e-11
gb|AAD55488.1|AC009322_28 Hypothetical protein [Arabidopsis thal... 73 4e-11
ref|NP_178132.1| pentatricopeptide repeat-containing protein [Ar... 73 4e-11
dbj|BAC43646.1| unknown protein [Arabidopsis thaliana] gi|289509... 73 4e-11
ref|XP_002267057.2| PREDICTED: pentatricopeptide repeat-containi... 72 6e-11
emb|CBI36299.3| unnamed protein product [Vitis vinifera] 72 6e-11
ref|XP_006302357.1| hypothetical protein CARUB_v10020417mg [Caps... 72 1e-10
ref|XP_002889307.1| pentatricopeptide repeat-containing protein ... 72 1e-10
ref|XP_006389760.1| hypothetical protein EUTSA_v10018671mg [Eutr... 71 2e-10
>ref|XP_004973815.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80150,
mitochondrial-like [Setaria italica]
Length = 457
Score = 106 bits (264), Expect = 4e-21
Identities = 57/130 (43%), Positives = 80/130 (61%), Gaps = 5/130 (3%)
Frame = +1
Query: 148 MLSLRTVRRICAAIDAASVTCIVAGLSKLRK-RSDFSVCAGESGCPDDFPTISACKAAVL 324
MLSL +R++CAA DA ++T I AGLS+ R FS S P DFPTI+AC+AAV
Sbjct: 1 MLSLGAIRKLCAAFDAVALTVIAAGLSRPPSGRHPFSSAHAHSPYPADFPTIAACRAAVS 60
Query: 325 NNRPRPKPCLEKETSSTRNCQGPL----QNSEPALFKLKKEKDPEKLFHLFKSNATNRLV 492
++ + + S P + +P L ++K E+DPE+L+ LF++NA NRL+
Sbjct: 61 ASKGSSRSSSRRRQPSPSPSSSPAAAAKEEEQPVLVRIKHERDPERLYELFRANAHNRLL 120
Query: 493 IENRFAFEDT 522
+ENRFAFEDT
Sbjct: 121 VENRFAFEDT 130
>ref|NP_001169447.1| uncharacterized protein LOC100383318 [Zea mays]
gi|224029437|gb|ACN33794.1| unknown [Zea mays]
gi|414869277|tpg|DAA47834.1| TPA: hypothetical protein
ZEAMMB73_389575 [Zea mays]
Length = 459
Score = 101 bits (251), Expect = 1e-19
Identities = 57/131 (43%), Positives = 83/131 (63%), Gaps = 7/131 (5%)
Frame = +1
Query: 148 MLSLRTVRRICAAIDAASVTCIVAGLSKLRK-RSDFSVCAGESGCPDDFPTISACKAAVL 324
MLSL +R++CAA DA ++T I AGLS+ R FS S P DFPTI+AC+AA+
Sbjct: 1 MLSLGALRKLCAAFDAVALTVIAAGLSRPPSGRHPFSSAHAHSSHPADFPTIAACRAAIS 60
Query: 325 NNRP--RPKPCLEKETSSTRNCQGPL----QNSEPALFKLKKEKDPEKLFHLFKSNATNR 486
++ R +P + + +SS + +P L ++K E+DPE+L+ LF++NA NR
Sbjct: 61 ASKGDRRRRPGVGQPSSSPSPSLAAAAAKEEQEQPVLVRIKHERDPERLYQLFRANAHNR 120
Query: 487 LVIENRFAFED 519
L++ENRFAFED
Sbjct: 121 LLVENRFAFED 131
>ref|XP_003574702.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80150,
mitochondrial-like [Brachypodium distachyon]
Length = 448
Score = 100 bits (249), Expect = 2e-19
Identities = 53/124 (42%), Positives = 83/124 (66%)
Frame = +1
Query: 148 MLSLRTVRRICAAIDAASVTCIVAGLSKLRKRSDFSVCAGESGCPDDFPTISACKAAVLN 327
MLSL +R++CAA DA ++T I AGLS R R FS A + P DFPTI++C+AAV+
Sbjct: 1 MLSLGAIRKLCAAFDAVALTVIAAGLSHPRSRP-FSARAHST--PHDFPTIASCRAAVVR 57
Query: 328 NRPRPKPCLEKETSSTRNCQGPLQNSEPALFKLKKEKDPEKLFHLFKSNATNRLVIENRF 507
++ + + ++ + +G + P L ++K E+DP++L+ LF++NA NRL++ENRF
Sbjct: 58 SKNQRRRAPNDAPAAAED-KGSTDSETPLLVRIKHERDPKRLYELFRANAHNRLLVENRF 116
Query: 508 AFED 519
AF+D
Sbjct: 117 AFQD 120
>ref|XP_002445939.1| hypothetical protein SORBIDRAFT_07g028400 [Sorghum bicolor]
gi|241942289|gb|EES15434.1| hypothetical protein
SORBIDRAFT_07g028400 [Sorghum bicolor]
Length = 465
Score = 99.8 bits (247), Expect = 3e-19
Identities = 59/137 (43%), Positives = 80/137 (58%), Gaps = 13/137 (9%)
Frame = +1
Query: 148 MLSLRTVRRICAAIDAASVTCIVAGLSKLRK-RSDFSVCAGESGCPDDFPTISACKAAVL 324
MLSL + ++CAA DA ++T I AGLS+ R FS S P DFPTI+AC+AAV
Sbjct: 1 MLSLGALHKLCAAFDAVALTVIAAGLSRPPSGRHPFSSAHAHSPHPVDFPTIAACRAAVS 60
Query: 325 --------NNRP---RPKPCLEKETSSTRN-CQGPLQNSEPALFKLKKEKDPEKLFHLFK 468
RP +P P ++ + Q +P L K+K E+DPE+L+ LF+
Sbjct: 61 ASKGDRRRRRRPGGGQPSPSSSPAAAAAEEKAEEEQQQQQPVLVKIKHERDPERLYQLFR 120
Query: 469 SNATNRLVIENRFAFED 519
+NA NRL++ENRFAFED
Sbjct: 121 TNAHNRLLVENRFAFED 137
>emb|CAJ75625.1| pentatricopeptide repeat-containing protein [Brachypodium
sylvaticum]
Length = 289
Score = 98.6 bits (244), Expect = 8e-19
Identities = 56/127 (44%), Positives = 82/127 (64%), Gaps = 3/127 (2%)
Frame = +1
Query: 148 MLSLRTVRRICAAIDAASVTCIVAGLSKLRKRSDFSVCAGESGCPDDFPTISACKAAVL- 324
MLSL +R++CAA DA ++T I AGLS R R FS A + P DFPTI++C+AAV
Sbjct: 1 MLSLGAIRKLCAAFDAVALTVIAAGLSHPRSRP-FSTRAHST--PPDFPTIASCRAAVAR 57
Query: 325 --NNRPRPKPCLEKETSSTRNCQGPLQNSEPALFKLKKEKDPEKLFHLFKSNATNRLVIE 498
N+R RP + + +G + P L ++K E++P++L+ LF++NA NRL++E
Sbjct: 58 SKNHRRRPP-----DAPAGAEDKGSRDSETPLLVRIKNERNPKRLYELFRANAHNRLLVE 112
Query: 499 NRFAFED 519
NRFAF+D
Sbjct: 113 NRFAFQD 119
>ref|NP_001062150.1| Os08g0499800 [Oryza sativa Japonica Group]
gi|42407346|dbj|BAD08807.1| putative drought-inducible
protein 1OS [Oryza sativa Japonica Group]
gi|113624119|dbj|BAF24064.1| Os08g0499800 [Oryza sativa
Japonica Group] gi|125562056|gb|EAZ07504.1| hypothetical
protein OsI_29761 [Oryza sativa Indica Group]
gi|215716978|dbj|BAG95341.1| unnamed protein product
[Oryza sativa Japonica Group]
Length = 443
Score = 98.2 bits (243), Expect = 1e-18
Identities = 56/124 (45%), Positives = 79/124 (63%)
Frame = +1
Query: 148 MLSLRTVRRICAAIDAASVTCIVAGLSKLRKRSDFSVCAGESGCPDDFPTISACKAAVLN 327
MLSL +R++CAA DA ++T I AGLS+ FS A S DFPTI++C+AAV +
Sbjct: 1 MLSLGAIRKLCAAFDAIALTVIAAGLSRT-SHHPFSAHAHYS--QPDFPTIASCRAAVAS 57
Query: 328 NRPRPKPCLEKETSSTRNCQGPLQNSEPALFKLKKEKDPEKLFHLFKSNATNRLVIENRF 507
++ R + S+T+ G P L ++K E+DP +L+ LF++NA NRL+IENRF
Sbjct: 58 SKWR-----RRHPSTTKESAGVEPAEPPVLVRIKNERDPVRLYELFRANAHNRLLIENRF 112
Query: 508 AFED 519
AFED
Sbjct: 113 AFED 116
>ref|XP_006659545.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80150,
mitochondrial-like [Oryza brachyantha]
Length = 446
Score = 92.0 bits (227), Expect = 7e-17
Identities = 56/125 (44%), Positives = 79/125 (63%), Gaps = 1/125 (0%)
Frame = +1
Query: 148 MLSLRTVRRICAAIDAASVTCIVAGLSKLRKRSDFSVCAGESGCPDDFPTISACKAAVLN 327
MLSL +R++CAA DA ++T I AGLS+ +SV A S DFPTI++C+AAV +
Sbjct: 1 MLSLGAIRKLCAAFDAVALTVIAAGLSR-SSHHPYSVYAHSS--QPDFPTIASCRAAVAS 57
Query: 328 NRPRPKPCLEKETSSTRNCQGPLQNSEPA-LFKLKKEKDPEKLFHLFKSNATNRLVIENR 504
++ R + + T++ EP+ L K+K E+DP +L+ L K NA NRL+IENR
Sbjct: 58 SKWRRR---QPSTAAAAPAAKGSAGVEPSVLMKIKDERDPVRLYELVKVNAHNRLLIENR 114
Query: 505 FAFED 519
FAFED
Sbjct: 115 FAFED 119
>gb|AFW69389.1| hypothetical protein ZEAMMB73_912579 [Zea mays]
Length = 590
Score = 82.0 bits (201), Expect = 7e-14
Identities = 49/121 (40%), Positives = 72/121 (59%), Gaps = 11/121 (9%)
Frame = +1
Query: 190 DAASVTC----IVAGLSKLRK-RSDFSVCAGESGCPDDFPTISACKAAVLNNRP--RPKP 348
DA + C I AGLS+ R FS +S P DFPTI+AC+AA+ ++ R +P
Sbjct: 97 DATAAICPPAVIAAGLSRPPSGRHPFSSAHAQSSHPVDFPTIAACRAAISASKGDRRRRP 156
Query: 349 CLEKETSSTR----NCQGPLQNSEPALFKLKKEKDPEKLFHLFKSNATNRLVIENRFAFE 516
+ + +SS + +P L ++K E+DPE+L+ LF++NA NRL++ENRFAFE
Sbjct: 157 GVGQHSSSPSPSLATAAAKEEQEQPVLVRIKHERDPERLYQLFRANAHNRLLVENRFAFE 216
Query: 517 D 519
D
Sbjct: 217 D 217
>gb|AFW69388.1| hypothetical protein ZEAMMB73_912579 [Zea mays]
Length = 529
Score = 82.0 bits (201), Expect = 7e-14
Identities = 49/121 (40%), Positives = 72/121 (59%), Gaps = 11/121 (9%)
Frame = +1
Query: 190 DAASVTC----IVAGLSKLRK-RSDFSVCAGESGCPDDFPTISACKAAVLNNRP--RPKP 348
DA + C I AGLS+ R FS +S P DFPTI+AC+AA+ ++ R +P
Sbjct: 97 DATAAICPPAVIAAGLSRPPSGRHPFSSAHAQSSHPVDFPTIAACRAAISASKGDRRRRP 156
Query: 349 CLEKETSSTR----NCQGPLQNSEPALFKLKKEKDPEKLFHLFKSNATNRLVIENRFAFE 516
+ + +SS + +P L ++K E+DPE+L+ LF++NA NRL++ENRFAFE
Sbjct: 157 GVGQHSSSPSPSLATAAAKEEQEQPVLVRIKHERDPERLYQLFRANAHNRLLVENRFAFE 216
Query: 517 D 519
D
Sbjct: 217 D 217
>ref|XP_004152207.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80150,
mitochondrial-like [Cucumis sativus]
gi|449484169|ref|XP_004156805.1| PREDICTED:
pentatricopeptide repeat-containing protein At1g80150,
mitochondrial-like [Cucumis sativus]
Length = 399
Score = 73.6 bits (179), Expect = 3e-11
Identities = 39/57 (68%), Positives = 43/57 (75%), Gaps = 4/57 (7%)
Frame = +1
Query: 364 TSSTRNCQGPLQNS----EPALFKLKKEKDPEKLFHLFKSNATNRLVIENRFAFEDT 522
T +T +QNS EPAL KLK E+DPEKLFHLFK+NA NRLVIENRFAFEDT
Sbjct: 20 TDTTAAVLNHVQNSKSLEEPALVKLKAERDPEKLFHLFKANAHNRLVIENRFAFEDT 76
>gb|EAZ43226.1| hypothetical protein OsJ_27826 [Oryza sativa Japonica Group]
Length = 515
Score = 73.6 bits (179), Expect = 3e-11
Identities = 36/78 (46%), Positives = 53/78 (67%)
Frame = +1
Query: 286 DFPTISACKAAVLNNRPRPKPCLEKETSSTRNCQGPLQNSEPALFKLKKEKDPEKLFHLF 465
DFPTI++C+AAV +++ R + S+T+ G P L ++K E+DP +L+ LF
Sbjct: 116 DFPTIASCRAAVASSKWR-----RRHPSTTKESAGVEPAEPPVLVRIKNERDPVRLYELF 170
Query: 466 KSNATNRLVIENRFAFED 519
++NA NRL+IENRFAFED
Sbjct: 171 RANAHNRLLIENRFAFED 188
>gb|EXB67315.1| hypothetical protein L484_025797 [Morus notabilis]
Length = 403
Score = 73.2 bits (178), Expect = 3e-11
Identities = 48/125 (38%), Positives = 58/125 (46%)
Frame = +1
Query: 148 MLSLRTVRRICAAIDAASVTCIVAGLSKLRKRSDFSVCAGESGCPDDFPTISACKAAVLN 327
MLSLR +RR C A AS + + C +AV N
Sbjct: 1 MLSLRPIRRFCHAAAPASASA----------------------------ALKDCSSAVSN 32
Query: 328 NRPRPKPCLEKETSSTRNCQGPLQNSEPALFKLKKEKDPEKLFHLFKSNATNRLVIENRF 507
PK + EPAL KLK E+DP+KLFHLFK+NA NR+V+ENRF
Sbjct: 33 KVFNPK-----------------ELEEPALVKLKAERDPDKLFHLFKANAHNRIVVENRF 75
Query: 508 AFEDT 522
AFEDT
Sbjct: 76 AFEDT 80
>gb|AAD55488.1|AC009322_28 Hypothetical protein [Arabidopsis thaliana]
Length = 419
Score = 72.8 bits (177), Expect = 4e-11
Identities = 35/53 (66%), Positives = 42/53 (79%)
Frame = +1
Query: 364 TSSTRNCQGPLQNSEPALFKLKKEKDPEKLFHLFKSNATNRLVIENRFAFEDT 522
++ + QG EPAL KLK E+DPEKL++LFK+NATNRLVIENRFAFEDT
Sbjct: 25 STESNQIQGLKPLEEPALVKLKSERDPEKLYNLFKANATNRLVIENRFAFEDT 77
>ref|NP_178132.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806404|sp|Q8GW57.2|PP134_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At1g80150, mitochondrial; Flags: Precursor
gi|332198242|gb|AEE36363.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 397
Score = 72.8 bits (177), Expect = 4e-11
Identities = 35/53 (66%), Positives = 42/53 (79%)
Frame = +1
Query: 364 TSSTRNCQGPLQNSEPALFKLKKEKDPEKLFHLFKSNATNRLVIENRFAFEDT 522
++ + QG EPAL KLK E+DPEKL++LFK+NATNRLVIENRFAFEDT
Sbjct: 25 STESNQIQGLKPLEEPALVKLKSERDPEKLYNLFKANATNRLVIENRFAFEDT 77
>dbj|BAC43646.1| unknown protein [Arabidopsis thaliana] gi|28950987|gb|AAO63417.1|
At1g80150 [Arabidopsis thaliana]
Length = 397
Score = 72.8 bits (177), Expect = 4e-11
Identities = 35/53 (66%), Positives = 42/53 (79%)
Frame = +1
Query: 364 TSSTRNCQGPLQNSEPALFKLKKEKDPEKLFHLFKSNATNRLVIENRFAFEDT 522
++ + QG EPAL KLK E+DPEKL++LFK+NATNRLVIENRFAFEDT
Sbjct: 25 STESNQIQGLKPLEEPALVKLKSERDPEKLYNLFKANATNRLVIENRFAFEDT 77
>ref|XP_002267057.2| PREDICTED: pentatricopeptide repeat-containing protein At1g80150,
mitochondrial-like [Vitis vinifera]
Length = 405
Score = 72.4 bits (176), Expect = 6e-11
Identities = 39/63 (61%), Positives = 45/63 (71%), Gaps = 4/63 (6%)
Frame = +1
Query: 346 PCLEKETSSTRNC----QGPLQNSEPALFKLKKEKDPEKLFHLFKSNATNRLVIENRFAF 513
P E TS+ NC PL+ EPAL KLK E+DPE+LF LFK+NA NRLV+ENRFAF
Sbjct: 21 PVAETVTSAKSNCIKKPDKPLE--EPALVKLKAERDPERLFQLFKANAHNRLVVENRFAF 78
Query: 514 EDT 522
EDT
Sbjct: 79 EDT 81
>emb|CBI36299.3| unnamed protein product [Vitis vinifera]
Length = 353
Score = 72.4 bits (176), Expect = 6e-11
Identities = 39/63 (61%), Positives = 45/63 (71%), Gaps = 4/63 (6%)
Frame = +1
Query: 346 PCLEKETSSTRNC----QGPLQNSEPALFKLKKEKDPEKLFHLFKSNATNRLVIENRFAF 513
P E TS+ NC PL+ EPAL KLK E+DPE+LF LFK+NA NRLV+ENRFAF
Sbjct: 21 PVAETVTSAKSNCIKKPDKPLE--EPALVKLKAERDPERLFQLFKANAHNRLVVENRFAF 78
Query: 514 EDT 522
EDT
Sbjct: 79 EDT 81
>ref|XP_006302357.1| hypothetical protein CARUB_v10020417mg [Capsella rubella]
gi|482571067|gb|EOA35255.1| hypothetical protein
CARUB_v10020417mg [Capsella rubella]
Length = 397
Score = 71.6 bits (174), Expect = 1e-10
Identities = 38/52 (73%), Positives = 42/52 (80%)
Frame = +1
Query: 367 SSTRNCQGPLQNSEPALFKLKKEKDPEKLFHLFKSNATNRLVIENRFAFEDT 522
SS N PL+ EPAL KLK E+DPEKLF LF++NATNRLVIENRFAFEDT
Sbjct: 28 SSESNQIQPLE--EPALVKLKSERDPEKLFKLFQANATNRLVIENRFAFEDT 77
>ref|XP_002889307.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297335148|gb|EFH65566.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 397
Score = 71.6 bits (174), Expect = 1e-10
Identities = 35/53 (66%), Positives = 41/53 (77%)
Frame = +1
Query: 364 TSSTRNCQGPLQNSEPALFKLKKEKDPEKLFHLFKSNATNRLVIENRFAFEDT 522
++ + QG EPAL KLK E+DPEKLF LF++NATNRLVIENRFAFEDT
Sbjct: 25 STDSNQIQGLKPLEEPALVKLKSERDPEKLFKLFQANATNRLVIENRFAFEDT 77
>ref|XP_006389760.1| hypothetical protein EUTSA_v10018671mg [Eutrema salsugineum]
gi|557086194|gb|ESQ27046.1| hypothetical protein
EUTSA_v10018671mg [Eutrema salsugineum]
Length = 397
Score = 70.9 bits (172), Expect = 2e-10
Identities = 35/46 (76%), Positives = 38/46 (82%)
Frame = +1
Query: 385 QGPLQNSEPALFKLKKEKDPEKLFHLFKSNATNRLVIENRFAFEDT 522
QG EPAL KLK E+DPEKLF LFK+NATN+LVIENRFAFEDT
Sbjct: 32 QGLKPLEEPALVKLKSERDPEKLFKLFKANATNQLVIENRFAFEDT 77