BLASTX nr result
ID: Zingiber24_contig00033978
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00033978
(202 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003580866.1| PREDICTED: SKP1-interacting partner 15-like ... 96 6e-18
gb|EMS53975.1| hypothetical protein TRIUR3_29958 [Triticum urartu] 95 8e-18
dbj|BAJ87878.1| predicted protein [Hordeum vulgare subsp. vulgare] 95 8e-18
dbj|BAJ90450.1| predicted protein [Hordeum vulgare subsp. vulgare] 95 8e-18
dbj|BAJ89599.1| predicted protein [Hordeum vulgare subsp. vulgare] 95 8e-18
ref|NP_001054329.2| Os04g0686700 [Oryza sativa Japonica Group] g... 95 1e-17
emb|CAJ86135.1| H0701F11.1 [Oryza sativa Indica Group] gi|903991... 95 1e-17
emb|CAE01860.2| OSJNBa0070M12.10 [Oryza sativa Japonica Group] 95 1e-17
ref|XP_002448817.1| hypothetical protein SORBIDRAFT_06g033750 [S... 91 2e-16
tpg|DAA36741.1| TPA: hypothetical protein ZEAMMB73_736273 [Zea m... 90 3e-16
gb|AFW59998.1| hypothetical protein ZEAMMB73_416712 [Zea mays] 89 6e-16
tpg|DAA37491.1| TPA: hypothetical protein ZEAMMB73_239938 [Zea m... 62 1e-07
ref|XP_002300927.1| F-box family protein [Populus trichocarpa] g... 60 2e-07
ref|XP_004237773.1| PREDICTED: SKP1-interacting partner 15-like ... 60 3e-07
ref|XP_006362821.1| PREDICTED: SKP1-interacting partner 15-like ... 59 7e-07
ref|XP_002887662.1| F-box family protein [Arabidopsis lyrata sub... 59 7e-07
ref|XP_006302409.1| hypothetical protein CARUB_v10020481mg [Caps... 59 9e-07
ref|XP_004292533.1| PREDICTED: SKP1-interacting partner 15-like ... 58 1e-06
ref|XP_006390143.1| hypothetical protein EUTSA_v10019824mg [Eutr... 57 3e-06
gb|AFW75212.1| hypothetical protein ZEAMMB73_949975 [Zea mays] 57 3e-06
>ref|XP_003580866.1| PREDICTED: SKP1-interacting partner 15-like [Brachypodium
distachyon]
Length = 406
Score = 95.5 bits (236), Expect = 6e-18
Identities = 40/61 (65%), Positives = 48/61 (78%)
Frame = +1
Query: 1 VFGGDGKVWFSGKKMRGKLAMWEEGVGKSDGGLWSWVDSIPECPEGMYRGFLFDAGFTST 180
VFGGDGKVWF+GK++RGKLAMWEE S GG W WVD +P +G+YRGF+FD GFT+
Sbjct: 346 VFGGDGKVWFAGKRVRGKLAMWEEDEVGSTGGKWDWVDGVPGYGDGVYRGFVFDGGFTAM 405
Query: 181 P 183
P
Sbjct: 406 P 406
>gb|EMS53975.1| hypothetical protein TRIUR3_29958 [Triticum urartu]
Length = 128
Score = 95.1 bits (235), Expect = 8e-18
Identities = 40/61 (65%), Positives = 47/61 (77%)
Frame = +1
Query: 1 VFGGDGKVWFSGKKMRGKLAMWEEGVGKSDGGLWSWVDSIPECPEGMYRGFLFDAGFTST 180
VFGGDGKVWF GK++RGKLAMWEE S GG W WVD +P +G+YRGF+FD GFT+
Sbjct: 68 VFGGDGKVWFGGKRVRGKLAMWEEDDVGSSGGKWDWVDGVPGYGDGVYRGFVFDGGFTAM 127
Query: 181 P 183
P
Sbjct: 128 P 128
>dbj|BAJ87878.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 260
Score = 95.1 bits (235), Expect = 8e-18
Identities = 40/61 (65%), Positives = 47/61 (77%)
Frame = +1
Query: 1 VFGGDGKVWFSGKKMRGKLAMWEEGVGKSDGGLWSWVDSIPECPEGMYRGFLFDAGFTST 180
VFGGDGKVWF GK++RGKLAMWEE S GG W WVD +P +G+YRGF+FD GFT+
Sbjct: 200 VFGGDGKVWFGGKRVRGKLAMWEEDDVGSSGGKWDWVDGVPGYGDGVYRGFVFDGGFTAM 259
Query: 181 P 183
P
Sbjct: 260 P 260
>dbj|BAJ90450.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 404
Score = 95.1 bits (235), Expect = 8e-18
Identities = 40/61 (65%), Positives = 47/61 (77%)
Frame = +1
Query: 1 VFGGDGKVWFSGKKMRGKLAMWEEGVGKSDGGLWSWVDSIPECPEGMYRGFLFDAGFTST 180
VFGGDGKVWF GK++RGKLAMWEE S GG W WVD +P +G+YRGF+FD GFT+
Sbjct: 344 VFGGDGKVWFGGKRVRGKLAMWEEDDVGSSGGKWDWVDGVPGYGDGVYRGFVFDGGFTAM 403
Query: 181 P 183
P
Sbjct: 404 P 404
>dbj|BAJ89599.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 405
Score = 95.1 bits (235), Expect = 8e-18
Identities = 40/61 (65%), Positives = 47/61 (77%)
Frame = +1
Query: 1 VFGGDGKVWFSGKKMRGKLAMWEEGVGKSDGGLWSWVDSIPECPEGMYRGFLFDAGFTST 180
VFGGDGKVWF GK++RGKLAMWEE S GG W WVD +P +G+YRGF+FD GFT+
Sbjct: 345 VFGGDGKVWFGGKRVRGKLAMWEEDDVGSSGGKWDWVDGVPGYGDGVYRGFVFDGGFTAM 404
Query: 181 P 183
P
Sbjct: 405 P 405
>ref|NP_001054329.2| Os04g0686700 [Oryza sativa Japonica Group]
gi|255675906|dbj|BAF16243.2| Os04g0686700, partial
[Oryza sativa Japonica Group]
Length = 424
Score = 94.7 bits (234), Expect = 1e-17
Identities = 39/61 (63%), Positives = 48/61 (78%)
Frame = +1
Query: 1 VFGGDGKVWFSGKKMRGKLAMWEEGVGKSDGGLWSWVDSIPECPEGMYRGFLFDAGFTST 180
VFGGDGKVWF+GK++RGKLAMWEE + GG W WVD +P +G+YRGF+FD GFT+
Sbjct: 364 VFGGDGKVWFAGKRVRGKLAMWEEDELGNSGGKWDWVDGVPGYSDGVYRGFVFDGGFTAM 423
Query: 181 P 183
P
Sbjct: 424 P 424
>emb|CAJ86135.1| H0701F11.1 [Oryza sativa Indica Group] gi|90399182|emb|CAH68364.1|
H0723C07.14 [Oryza sativa Indica Group]
gi|125550307|gb|EAY96129.1| hypothetical protein
OsI_18008 [Oryza sativa Indica Group]
Length = 411
Score = 94.7 bits (234), Expect = 1e-17
Identities = 39/61 (63%), Positives = 48/61 (78%)
Frame = +1
Query: 1 VFGGDGKVWFSGKKMRGKLAMWEEGVGKSDGGLWSWVDSIPECPEGMYRGFLFDAGFTST 180
VFGGDGKVWF+GK++RGKLAMWEE + GG W WVD +P +G+YRGF+FD GFT+
Sbjct: 351 VFGGDGKVWFAGKRVRGKLAMWEEDELGNSGGKWDWVDGVPGYSDGVYRGFVFDGGFTAM 410
Query: 181 P 183
P
Sbjct: 411 P 411
>emb|CAE01860.2| OSJNBa0070M12.10 [Oryza sativa Japonica Group]
Length = 358
Score = 94.7 bits (234), Expect = 1e-17
Identities = 39/61 (63%), Positives = 48/61 (78%)
Frame = +1
Query: 1 VFGGDGKVWFSGKKMRGKLAMWEEGVGKSDGGLWSWVDSIPECPEGMYRGFLFDAGFTST 180
VFGGDGKVWF+GK++RGKLAMWEE + GG W WVD +P +G+YRGF+FD GFT+
Sbjct: 298 VFGGDGKVWFAGKRVRGKLAMWEEDELGNSGGKWDWVDGVPGYSDGVYRGFVFDGGFTAM 357
Query: 181 P 183
P
Sbjct: 358 P 358
>ref|XP_002448817.1| hypothetical protein SORBIDRAFT_06g033750 [Sorghum bicolor]
gi|241940000|gb|EES13145.1| hypothetical protein
SORBIDRAFT_06g033750 [Sorghum bicolor]
Length = 413
Score = 90.9 bits (224), Expect = 2e-16
Identities = 39/61 (63%), Positives = 47/61 (77%)
Frame = +1
Query: 1 VFGGDGKVWFSGKKMRGKLAMWEEGVGKSDGGLWSWVDSIPECPEGMYRGFLFDAGFTST 180
VFGGDGKVWF+GK++RGKLAMWEE GG W WVD +P +G+YRGF+FD GFT+
Sbjct: 354 VFGGDGKVWFAGKRVRGKLAMWEED-EMGSGGNWDWVDGVPGYGDGVYRGFVFDGGFTAI 412
Query: 181 P 183
P
Sbjct: 413 P 413
>tpg|DAA36741.1| TPA: hypothetical protein ZEAMMB73_736273 [Zea mays]
Length = 425
Score = 90.1 bits (222), Expect = 3e-16
Identities = 39/61 (63%), Positives = 48/61 (78%)
Frame = +1
Query: 1 VFGGDGKVWFSGKKMRGKLAMWEEGVGKSDGGLWSWVDSIPECPEGMYRGFLFDAGFTST 180
VFGGDGKVWF+GK++RGKLAMWEE S G W WVD +P +G+YRGF+FD+GFT+
Sbjct: 366 VFGGDGKVWFAGKRVRGKLAMWEEDETGS-SGKWDWVDGVPGYDDGVYRGFVFDSGFTAI 424
Query: 181 P 183
P
Sbjct: 425 P 425
>gb|AFW59998.1| hypothetical protein ZEAMMB73_416712 [Zea mays]
Length = 409
Score = 89.0 bits (219), Expect = 6e-16
Identities = 40/62 (64%), Positives = 49/62 (79%), Gaps = 1/62 (1%)
Frame = +1
Query: 1 VFGGDGKVWFSGKKMRGKLAMWEEG-VGKSDGGLWSWVDSIPECPEGMYRGFLFDAGFTS 177
VFGGDGKVWF+GK++RGKLAMWEE +G S G W WVD +P +G+YRGF+FD GFT+
Sbjct: 350 VFGGDGKVWFAGKRVRGKLAMWEEDEMGSS--GKWDWVDGLPGYGDGVYRGFVFDGGFTA 407
Query: 178 TP 183
P
Sbjct: 408 IP 409
>tpg|DAA37491.1| TPA: hypothetical protein ZEAMMB73_239938 [Zea mays]
Length = 527
Score = 61.6 bits (148), Expect = 1e-07
Identities = 27/41 (65%), Positives = 31/41 (75%)
Frame = +1
Query: 1 VFGGDGKVWFSGKKMRGKLAMWEEGVGKSDGGLWSWVDSIP 123
VF GDGKVWF GK++RGKLAMWEE +S G W WVD +P
Sbjct: 479 VFKGDGKVWFGGKRVRGKLAMWEEDEMES-SGKWDWVDGLP 518
>ref|XP_002300927.1| F-box family protein [Populus trichocarpa]
gi|222842653|gb|EEE80200.1| F-box family protein
[Populus trichocarpa]
Length = 376
Score = 60.5 bits (145), Expect = 2e-07
Identities = 28/61 (45%), Positives = 42/61 (68%)
Frame = +1
Query: 1 VFGGDGKVWFSGKKMRGKLAMWEEGVGKSDGGLWSWVDSIPECPEGMYRGFLFDAGFTST 180
VFGG +V FS K+MR KLA+W++ DG +W W++ +P +G+ RGF+F+AG T+
Sbjct: 321 VFGGGDRVCFSAKRMR-KLALWDD----CDGVVWRWIEGVPVGGDGLCRGFVFEAGRTAL 375
Query: 181 P 183
P
Sbjct: 376 P 376
>ref|XP_004237773.1| PREDICTED: SKP1-interacting partner 15-like [Solanum lycopersicum]
Length = 377
Score = 60.1 bits (144), Expect = 3e-07
Identities = 27/61 (44%), Positives = 40/61 (65%)
Frame = +1
Query: 1 VFGGDGKVWFSGKKMRGKLAMWEEGVGKSDGGLWSWVDSIPECPEGMYRGFLFDAGFTST 180
VFGG +V FSGK++ G+LA+WEE + G W W+ +P +G+YRGF+F+A +
Sbjct: 320 VFGGGSRVCFSGKRV-GRLALWEEN--ERGKGEWRWISGVPGNSDGLYRGFVFEARLNAV 376
Query: 181 P 183
P
Sbjct: 377 P 377
>ref|XP_006362821.1| PREDICTED: SKP1-interacting partner 15-like [Solanum tuberosum]
Length = 377
Score = 58.9 bits (141), Expect = 7e-07
Identities = 27/61 (44%), Positives = 39/61 (63%)
Frame = +1
Query: 1 VFGGDGKVWFSGKKMRGKLAMWEEGVGKSDGGLWSWVDSIPECPEGMYRGFLFDAGFTST 180
VFGG +V FSGK++ G+LA+WEE + G W W+ +P +G+YRGF+F+A
Sbjct: 320 VFGGGSRVCFSGKRV-GRLALWEEN--ECGKGEWRWISGVPGNSDGLYRGFVFEARLNVV 376
Query: 181 P 183
P
Sbjct: 377 P 377
>ref|XP_002887662.1| F-box family protein [Arabidopsis lyrata subsp. lyrata]
gi|297333503|gb|EFH63921.1| F-box family protein
[Arabidopsis lyrata subsp. lyrata]
Length = 374
Score = 58.9 bits (141), Expect = 7e-07
Identities = 29/61 (47%), Positives = 38/61 (62%)
Frame = +1
Query: 1 VFGGDGKVWFSGKKMRGKLAMWEEGVGKSDGGLWSWVDSIPECPEGMYRGFLFDAGFTST 180
VFGG +V+FS K+M GKLAMW+ G W W+D +P +G+ RGF+FDA T
Sbjct: 321 VFGGGDRVYFSAKRM-GKLAMWDCWEG------WRWIDGVPGYADGLCRGFVFDAKLTMM 373
Query: 181 P 183
P
Sbjct: 374 P 374
>ref|XP_006302409.1| hypothetical protein CARUB_v10020481mg [Capsella rubella]
gi|482571119|gb|EOA35307.1| hypothetical protein
CARUB_v10020481mg [Capsella rubella]
Length = 376
Score = 58.5 bits (140), Expect = 9e-07
Identities = 29/61 (47%), Positives = 38/61 (62%)
Frame = +1
Query: 1 VFGGDGKVWFSGKKMRGKLAMWEEGVGKSDGGLWSWVDSIPECPEGMYRGFLFDAGFTST 180
VFGG +V+FS K+M GKLAMW+ G W W+D +P +G+ RGF+FDA T
Sbjct: 323 VFGGGDRVYFSAKRM-GKLAMWDCWEG------WRWIDGVPGYADGLCRGFVFDAKLTLM 375
Query: 181 P 183
P
Sbjct: 376 P 376
>ref|XP_004292533.1| PREDICTED: SKP1-interacting partner 15-like [Fragaria vesca subsp.
vesca]
Length = 357
Score = 57.8 bits (138), Expect = 1e-06
Identities = 26/61 (42%), Positives = 40/61 (65%)
Frame = +1
Query: 1 VFGGDGKVWFSGKKMRGKLAMWEEGVGKSDGGLWSWVDSIPECPEGMYRGFLFDAGFTST 180
VFGG +V FS K++ GKLA+W+ GK++ W W++ +P +G+ RGF+F+A T
Sbjct: 301 VFGGGDRVCFSAKRL-GKLALWDNCEGKAE---WKWIEGVPGSGDGLCRGFVFEARLTPL 356
Query: 181 P 183
P
Sbjct: 357 P 357
>ref|XP_006390143.1| hypothetical protein EUTSA_v10019824mg [Eutrema salsugineum]
gi|557086577|gb|ESQ27429.1| hypothetical protein
EUTSA_v10019824mg [Eutrema salsugineum]
Length = 373
Score = 57.0 bits (136), Expect = 3e-06
Identities = 28/58 (48%), Positives = 37/58 (63%)
Frame = +1
Query: 1 VFGGDGKVWFSGKKMRGKLAMWEEGVGKSDGGLWSWVDSIPECPEGMYRGFLFDAGFT 174
VFGG +V+FS K+M GKLAMW+ G W W+D +P +G+ RGF+FDA T
Sbjct: 319 VFGGGDRVYFSAKRM-GKLAMWDCWQG------WRWIDGVPGYADGLCRGFVFDAKLT 369
>gb|AFW75212.1| hypothetical protein ZEAMMB73_949975 [Zea mays]
Length = 261
Score = 57.0 bits (136), Expect = 3e-06
Identities = 26/37 (70%), Positives = 30/37 (81%), Gaps = 1/37 (2%)
Frame = +1
Query: 1 VFGGDGKVWFSGKKMRGKLAMWEEG-VGKSDGGLWSW 108
VFGGDGKVWF+GK++RGKLAMWEE +G S G W W
Sbjct: 218 VFGGDGKVWFAGKRVRGKLAMWEEDEMGSS--GKWDW 252