BLASTX nr result
ID: Zingiber24_contig00033898
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00033898
(393 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006663263.1| PREDICTED: SWI/SNF complex subunit SWI3C-lik... 59 5e-07
ref|XP_003578845.1| PREDICTED: SWI/SNF complex subunit SWI3C-lik... 59 5e-07
ref|XP_002441913.1| hypothetical protein SORBIDRAFT_08g004790 [S... 58 1e-06
tpg|DAA55528.1| TPA: switch/sucrose nonfermenting 3C [Zea mays] 58 1e-06
tpg|DAA55527.1| TPA: hypothetical protein ZEAMMB73_008834 [Zea m... 58 1e-06
tpg|DAA55526.1| TPA: hypothetical protein ZEAMMB73_008834 [Zea m... 58 1e-06
gb|ACV69993.1| switch/sucrose nonfermenting 3C [Zea mays] 58 1e-06
gb|ACN35861.1| unknown [Zea mays] 58 1e-06
ref|NP_001136654.1| uncharacterized protein LOC100216783 [Zea ma... 58 1e-06
ref|NP_001065911.1| Os11g0183700 [Oryza sativa Japonica Group] g... 57 2e-06
gb|EEE51768.1| hypothetical protein OsJ_33208 [Oryza sativa Japo... 57 2e-06
gb|EEC67805.1| hypothetical protein OsI_35371 [Oryza sativa Indi... 57 2e-06
ref|XP_004977229.1| PREDICTED: SWI/SNF complex subunit SWI3C-lik... 57 3e-06
ref|XP_004978879.1| PREDICTED: SWI/SNF complex subunit SWI3C-lik... 57 3e-06
ref|XP_004978878.1| PREDICTED: SWI/SNF complex subunit SWI3C-lik... 57 3e-06
>ref|XP_006663263.1| PREDICTED: SWI/SNF complex subunit SWI3C-like [Oryza brachyantha]
Length = 789
Score = 59.3 bits (142), Expect = 5e-07
Identities = 29/49 (59%), Positives = 35/49 (71%), Gaps = 2/49 (4%)
Frame = -3
Query: 313 FGPRLPLSAIH--PAPVSQNPGFNSAIPNNSTPNHHPLSRSSSSGNTRI 173
FGPRLPLSAI P+P + N FNS +PN+ TPNHH L RSSS N+ +
Sbjct: 740 FGPRLPLSAIQTQPSPQTSNIMFNSGMPNSVTPNHHQLLRSSSGNNSSV 788
>ref|XP_003578845.1| PREDICTED: SWI/SNF complex subunit SWI3C-like [Brachypodium
distachyon]
Length = 778
Score = 59.3 bits (142), Expect = 5e-07
Identities = 27/47 (57%), Positives = 31/47 (65%), Gaps = 2/47 (4%)
Frame = -3
Query: 313 FGPRLPLSAIHPAPVSQNPG--FNSAIPNNSTPNHHPLSRSSSSGNT 179
FGPRLPLSAIHP S P FN +PN+ TPNHHP+ R S N+
Sbjct: 728 FGPRLPLSAIHPGSTSSGPSVMFNPGMPNSVTPNHHPMLRPPSGNNS 774
>ref|XP_002441913.1| hypothetical protein SORBIDRAFT_08g004790 [Sorghum bicolor]
gi|241942606|gb|EES15751.1| hypothetical protein
SORBIDRAFT_08g004790 [Sorghum bicolor]
Length = 774
Score = 58.2 bits (139), Expect = 1e-06
Identities = 27/49 (55%), Positives = 33/49 (67%), Gaps = 2/49 (4%)
Frame = -3
Query: 313 FGPRLPLSAIHPAPVSQNPG--FNSAIPNNSTPNHHPLSRSSSSGNTRI 173
FGPRLPLSAI+P S P FN +PN++ PNHHPL RS S N+ +
Sbjct: 725 FGPRLPLSAINPGSSSSAPNMMFNPGMPNSAAPNHHPLLRSPSGNNSNV 773
>tpg|DAA55528.1| TPA: switch/sucrose nonfermenting 3C [Zea mays]
Length = 773
Score = 57.8 bits (138), Expect = 1e-06
Identities = 27/49 (55%), Positives = 33/49 (67%), Gaps = 2/49 (4%)
Frame = -3
Query: 313 FGPRLPLSAIHPAPVSQNPG--FNSAIPNNSTPNHHPLSRSSSSGNTRI 173
FGPRLPLSAI+P S P FN +PN++ PNHHPL RS S N+ +
Sbjct: 724 FGPRLPLSAINPGSSSSAPNMMFNHGMPNSAAPNHHPLLRSPSGDNSNV 772
>tpg|DAA55527.1| TPA: hypothetical protein ZEAMMB73_008834 [Zea mays]
Length = 283
Score = 57.8 bits (138), Expect = 1e-06
Identities = 27/49 (55%), Positives = 33/49 (67%), Gaps = 2/49 (4%)
Frame = -3
Query: 313 FGPRLPLSAIHPAPVSQNPG--FNSAIPNNSTPNHHPLSRSSSSGNTRI 173
FGPRLPLSAI+P S P FN +PN++ PNHHPL RS S N+ +
Sbjct: 234 FGPRLPLSAINPGSSSSAPNMMFNHGMPNSAAPNHHPLLRSPSGDNSNV 282
>tpg|DAA55526.1| TPA: hypothetical protein ZEAMMB73_008834 [Zea mays]
Length = 163
Score = 57.8 bits (138), Expect = 1e-06
Identities = 27/49 (55%), Positives = 33/49 (67%), Gaps = 2/49 (4%)
Frame = -3
Query: 313 FGPRLPLSAIHPAPVSQNPG--FNSAIPNNSTPNHHPLSRSSSSGNTRI 173
FGPRLPLSAI+P S P FN +PN++ PNHHPL RS S N+ +
Sbjct: 114 FGPRLPLSAINPGSSSSAPNMMFNHGMPNSAAPNHHPLLRSPSGDNSNV 162
>gb|ACV69993.1| switch/sucrose nonfermenting 3C [Zea mays]
Length = 773
Score = 57.8 bits (138), Expect = 1e-06
Identities = 27/49 (55%), Positives = 33/49 (67%), Gaps = 2/49 (4%)
Frame = -3
Query: 313 FGPRLPLSAIHPAPVSQNPG--FNSAIPNNSTPNHHPLSRSSSSGNTRI 173
FGPRLPLSAI+P S P FN +PN++ PNHHPL RS S N+ +
Sbjct: 724 FGPRLPLSAINPGSSSSAPNMMFNHGMPNSAAPNHHPLLRSPSGDNSNV 772
>gb|ACN35861.1| unknown [Zea mays]
Length = 627
Score = 57.8 bits (138), Expect = 1e-06
Identities = 27/49 (55%), Positives = 33/49 (67%), Gaps = 2/49 (4%)
Frame = -3
Query: 313 FGPRLPLSAIHPAPVSQNPG--FNSAIPNNSTPNHHPLSRSSSSGNTRI 173
FGPRLPLSAI+P S P FN +PN++ PNHHPL RS S N+ +
Sbjct: 578 FGPRLPLSAINPGSSSSAPNMMFNHGMPNSAAPNHHPLLRSPSGDNSNV 626
>ref|NP_001136654.1| uncharacterized protein LOC100216783 [Zea mays]
gi|194696518|gb|ACF82343.1| unknown [Zea mays]
Length = 257
Score = 57.8 bits (138), Expect = 1e-06
Identities = 27/49 (55%), Positives = 33/49 (67%), Gaps = 2/49 (4%)
Frame = -3
Query: 313 FGPRLPLSAIHPAPVSQNPG--FNSAIPNNSTPNHHPLSRSSSSGNTRI 173
FGPRLPLSAI+P S P FN +PN++ PNHHPL RS S N+ +
Sbjct: 208 FGPRLPLSAINPGSSSSAPNMMFNHGMPNSAAPNHHPLLRSPSGDNSNV 256
>ref|NP_001065911.1| Os11g0183700 [Oryza sativa Japonica Group]
gi|62732908|gb|AAX95027.1| hypothetical protein
LOC_Os11g08080 [Oryza sativa Japonica Group]
gi|77549015|gb|ABA91812.1| SWIRM domain containing
protein, expressed [Oryza sativa Japonica Group]
gi|113644615|dbj|BAF27756.1| Os11g0183700 [Oryza sativa
Japonica Group] gi|215695000|dbj|BAG90191.1| unnamed
protein product [Oryza sativa Japonica Group]
Length = 784
Score = 57.4 bits (137), Expect = 2e-06
Identities = 28/49 (57%), Positives = 34/49 (69%), Gaps = 2/49 (4%)
Frame = -3
Query: 313 FGPRLPLSAIH--PAPVSQNPGFNSAIPNNSTPNHHPLSRSSSSGNTRI 173
FGPRLPLSAI P+P + N FN +PN+ TPNHH L RSSS N+ +
Sbjct: 735 FGPRLPLSAIQTQPSPQTSNIMFNPGMPNSVTPNHHQLLRSSSGNNSSV 783
>gb|EEE51768.1| hypothetical protein OsJ_33208 [Oryza sativa Japonica Group]
Length = 784
Score = 57.4 bits (137), Expect = 2e-06
Identities = 28/49 (57%), Positives = 34/49 (69%), Gaps = 2/49 (4%)
Frame = -3
Query: 313 FGPRLPLSAIH--PAPVSQNPGFNSAIPNNSTPNHHPLSRSSSSGNTRI 173
FGPRLPLSAI P+P + N FN +PN+ TPNHH L RSSS N+ +
Sbjct: 735 FGPRLPLSAIQTQPSPQTSNIMFNPGMPNSVTPNHHQLLRSSSGNNSSV 783
>gb|EEC67805.1| hypothetical protein OsI_35371 [Oryza sativa Indica Group]
Length = 785
Score = 57.4 bits (137), Expect = 2e-06
Identities = 28/49 (57%), Positives = 34/49 (69%), Gaps = 2/49 (4%)
Frame = -3
Query: 313 FGPRLPLSAIH--PAPVSQNPGFNSAIPNNSTPNHHPLSRSSSSGNTRI 173
FGPRLPLSAI P+P + N FN +PN+ TPNHH L RSSS N+ +
Sbjct: 736 FGPRLPLSAIQTQPSPQTSNIMFNPGMPNSVTPNHHQLLRSSSGNNSSV 784
>ref|XP_004977229.1| PREDICTED: SWI/SNF complex subunit SWI3C-like [Setaria italica]
Length = 780
Score = 57.0 bits (136), Expect = 3e-06
Identities = 27/50 (54%), Positives = 32/50 (64%), Gaps = 3/50 (6%)
Frame = -3
Query: 313 FGPRLPLSAIHPAPVSQNPG---FNSAIPNNSTPNHHPLSRSSSSGNTRI 173
FGPRLPLSAIHP S + FN +PN+S PNHHPL R S N+ +
Sbjct: 730 FGPRLPLSAIHPGTSSSSAPSMMFNPGMPNSSAPNHHPLLRPPSGNNSNV 779
>ref|XP_004978879.1| PREDICTED: SWI/SNF complex subunit SWI3C-like isoform X2 [Setaria
italica]
Length = 783
Score = 56.6 bits (135), Expect = 3e-06
Identities = 28/47 (59%), Positives = 34/47 (72%), Gaps = 2/47 (4%)
Frame = -3
Query: 313 FGPRLPLSAIH--PAPVSQNPGFNSAIPNNSTPNHHPLSRSSSSGNT 179
FGPRLPLSAI P+P + N FNS +P++ TPNHH L RSSS N+
Sbjct: 734 FGPRLPLSAIQTQPSPQASNIMFNSGMPSSVTPNHHQLLRSSSGNNS 780
>ref|XP_004978878.1| PREDICTED: SWI/SNF complex subunit SWI3C-like isoform X1 [Setaria
italica]
Length = 786
Score = 56.6 bits (135), Expect = 3e-06
Identities = 28/47 (59%), Positives = 34/47 (72%), Gaps = 2/47 (4%)
Frame = -3
Query: 313 FGPRLPLSAIH--PAPVSQNPGFNSAIPNNSTPNHHPLSRSSSSGNT 179
FGPRLPLSAI P+P + N FNS +P++ TPNHH L RSSS N+
Sbjct: 737 FGPRLPLSAIQTQPSPQASNIMFNSGMPSSVTPNHHQLLRSSSGNNS 783