BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00033701
         (1051 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006489672.1| PREDICTED: splicing factor U2af large subuni...    98   6e-18
ref|XP_006489671.1| PREDICTED: splicing factor U2af large subuni...    98   6e-18
gb|AFW89625.1| hypothetical protein ZEAMMB73_282398 [Zea mays]         94   9e-17
gb|AFW89624.1| hypothetical protein ZEAMMB73_282398 [Zea mays]         94   9e-17
ref|NP_001170011.1| uncharacterized protein LOC100383918 [Zea ma...    94   9e-17
ref|XP_006420295.1| hypothetical protein CICLE_v10004248mg [Citr...    93   2e-16
ref|XP_002465895.1| hypothetical protein SORBIDRAFT_01g047730 [S...    90   2e-15
ref|XP_006649367.1| PREDICTED: splicing factor U2af large subuni...    86   2e-14
ref|NP_850210.2| RNA recognition motif-containing protein [Arabi...    86   2e-14
gb|EEC74478.1| hypothetical protein OsI_09930 [Oryza sativa Indi...    86   2e-14
ref|XP_004985776.1| PREDICTED: uncharacterized protein LOC101753...    85   5e-14
ref|NP_001048907.1| Os03g0138100 [Oryza sativa Japonica Group] g...    84   9e-14
gb|ABF93875.1| RNA recognition motif family protein, expressed [...    84   9e-14
ref|XP_004296390.1| PREDICTED: splicing factor U2AF 50 kDa subun...    82   5e-13
ref|XP_002528813.1| splicing factor u2af large subunit, putative...    82   5e-13
ref|XP_006857448.1| hypothetical protein AMTR_s00067p00176230 [A...    81   8e-13
ref|XP_006410488.1| hypothetical protein EUTSA_v10016911mg [Eutr...    80   1e-12
gb|EXB46745.1| Splicing factor U2AF 50 kDa subunit [Morus notabi...    80   2e-12
gb|ABF93874.1| RNA recognition motif family protein, expressed [...    79   2e-12
ref|XP_003558854.1| PREDICTED: uncharacterized protein LOC100840...    79   3e-12

>ref|XP_006489672.1| PREDICTED: splicing factor U2af large subunit B-like isoform X2
            [Citrus sinensis]
          Length = 965

 Score = 97.8 bits (242), Expect = 6e-18
 Identities = 76/261 (29%), Positives = 121/261 (46%), Gaps = 42/261 (16%)
 Frame = -1

Query: 1051 DDVRLECTRFGTVKEVNLVRYNDNQV------------AVAGASETCNNEDSIEIECRTE 908
            +DVRLEC RFGTVK VN+V+Y D+ +            A AG  +   N+++ E + R E
Sbjct: 704  EDVRLECARFGTVKSVNVVKYGDSNIFTIQACEGNENTASAGVGQNLTNDETNEKQERLE 763

Query: 907  DPSDQHQ----------HSQDLMPEGDIGSAGDTSNGSGE------DVLRIDDSSAIEIQ 776
            + +D              S+++M  G++ +  D    SG        +  +D   A+E Q
Sbjct: 764  EVTDHKSIKNNELEILNDSKEVMEAGEVNNVKDNRPASGSMGDEPSQLCELDTDMAVEYQ 823

Query: 775  -HIADVEIGQQLESNKVTSMNEEEIXXXXXXXXP-KLDMVDAEIGSSSCRNVTAAE---- 614
             H +  EI  Q    +V ++ +E            +L+ +  E  SS+  ++   E    
Sbjct: 824  AHDSTSEIVSQGVPTQVNTLKDEPCAHDDKVTCNIQLEHMGEENKSSAKEDLNLEEVNGN 883

Query: 613  ----PAESTIDRMDSRTVVDKGTGDSDE----FAFEPGSIFVEFLRKEAACTAAHSLHGR 458
                   S    M S + V+ G  ++ +      FEPG +FVE+ R EA+C AAHSLH R
Sbjct: 884  SEAFTGASNEMGMQS-SAVENGDNENQDPNQGHIFEPGCVFVEYRRAEASCMAAHSLHRR 942

Query: 457  TYGEQIVTAGFFPYDKYTARF 395
             + ++IV   + P + Y ARF
Sbjct: 943  LFDDRIVAVEYIPLNLYRARF 963


>ref|XP_006489671.1| PREDICTED: splicing factor U2af large subunit B-like isoform X1
            [Citrus sinensis]
          Length = 967

 Score = 97.8 bits (242), Expect = 6e-18
 Identities = 76/261 (29%), Positives = 121/261 (46%), Gaps = 42/261 (16%)
 Frame = -1

Query: 1051 DDVRLECTRFGTVKEVNLVRYNDNQV------------AVAGASETCNNEDSIEIECRTE 908
            +DVRLEC RFGTVK VN+V+Y D+ +            A AG  +   N+++ E + R E
Sbjct: 706  EDVRLECARFGTVKSVNVVKYGDSNIFTIQACEGNENTASAGVGQNLTNDETNEKQERLE 765

Query: 907  DPSDQHQ----------HSQDLMPEGDIGSAGDTSNGSGE------DVLRIDDSSAIEIQ 776
            + +D              S+++M  G++ +  D    SG        +  +D   A+E Q
Sbjct: 766  EVTDHKSIKNNELEILNDSKEVMEAGEVNNVKDNRPASGSMGDEPSQLCELDTDMAVEYQ 825

Query: 775  -HIADVEIGQQLESNKVTSMNEEEIXXXXXXXXP-KLDMVDAEIGSSSCRNVTAAE---- 614
             H +  EI  Q    +V ++ +E            +L+ +  E  SS+  ++   E    
Sbjct: 826  AHDSTSEIVSQGVPTQVNTLKDEPCAHDDKVTCNIQLEHMGEENKSSAKEDLNLEEVNGN 885

Query: 613  ----PAESTIDRMDSRTVVDKGTGDSDE----FAFEPGSIFVEFLRKEAACTAAHSLHGR 458
                   S    M S + V+ G  ++ +      FEPG +FVE+ R EA+C AAHSLH R
Sbjct: 886  SEAFTGASNEMGMQS-SAVENGDNENQDPNQGHIFEPGCVFVEYRRAEASCMAAHSLHRR 944

Query: 457  TYGEQIVTAGFFPYDKYTARF 395
             + ++IV   + P + Y ARF
Sbjct: 945  LFDDRIVAVEYIPLNLYRARF 965


>gb|AFW89625.1| hypothetical protein ZEAMMB73_282398 [Zea mays]
          Length = 635

 Score = 94.0 bits (232), Expect = 9e-17
 Identities = 79/265 (29%), Positives = 111/265 (41%), Gaps = 46/265 (17%)
 Frame = -1

Query: 1051 DDVRLECTRFGTVKEVNLVRYNDNQVAVAGASETCNNEDSIEIECRTEDPSDQ-----HQ 887
            +DVR+ECTRFG VK VN+V Y       AG S    N   ++IEC     ++       +
Sbjct: 374  EDVRVECTRFGAVKSVNVVEY-----PAAGVSAAEENIVELKIECTEFSDTENIAKAVSE 428

Query: 886  HSQDLMPEGDI---GSAGDT------------------SNGS---GEDVLRIDDSSAIEI 779
            +S  ++P  D+     A DT                  SN +    E  +  +D+   E 
Sbjct: 429  YSVPIIPSIDVLNHSVASDTKDVDLIPESQDQKDKHLPSNAALCESEAPVADEDAELDET 488

Query: 778  QHIADVEIGQQLESNKV-TSMNEEEIXXXXXXXXPKLDMVDAEIGSSSCRNVTAAEPAES 602
            Q  A +   Q  E++    +++E +            D    E      R      PA  
Sbjct: 489  QSRAALPTPQHAEADHTEAAVDENKHTGAGKVTATATDDDAVEKSHGDPRTSETCNPAGP 548

Query: 601  TIDRMDSRTVVDKGTGDSDE----------------FAFEPGSIFVEFLRKEAACTAAHS 470
            T          ++G GD  E                F FEPGS+ VEFLR+EAAC AAHS
Sbjct: 549  TDKAEKPGRYSEQGAGDVTEDRPEKEAQAVGTSDTGFVFEPGSVLVEFLREEAACMAAHS 608

Query: 469  LHGRTYGEQIVTAGFFPYDKYTARF 395
            LHGR +G + V AG+ PYD Y  ++
Sbjct: 609  LHGRRFGNRTVHAGYAPYDLYLQKY 633


>gb|AFW89624.1| hypothetical protein ZEAMMB73_282398 [Zea mays]
          Length = 378

 Score = 94.0 bits (232), Expect = 9e-17
 Identities = 79/265 (29%), Positives = 111/265 (41%), Gaps = 46/265 (17%)
 Frame = -1

Query: 1051 DDVRLECTRFGTVKEVNLVRYNDNQVAVAGASETCNNEDSIEIECRTEDPSDQ-----HQ 887
            +DVR+ECTRFG VK VN+V Y       AG S    N   ++IEC     ++       +
Sbjct: 117  EDVRVECTRFGAVKSVNVVEY-----PAAGVSAAEENIVELKIECTEFSDTENIAKAVSE 171

Query: 886  HSQDLMPEGDI---GSAGDT------------------SNGS---GEDVLRIDDSSAIEI 779
            +S  ++P  D+     A DT                  SN +    E  +  +D+   E 
Sbjct: 172  YSVPIIPSIDVLNHSVASDTKDVDLIPESQDQKDKHLPSNAALCESEAPVADEDAELDET 231

Query: 778  QHIADVEIGQQLESNKV-TSMNEEEIXXXXXXXXPKLDMVDAEIGSSSCRNVTAAEPAES 602
            Q  A +   Q  E++    +++E +            D    E      R      PA  
Sbjct: 232  QSRAALPTPQHAEADHTEAAVDENKHTGAGKVTATATDDDAVEKSHGDPRTSETCNPAGP 291

Query: 601  TIDRMDSRTVVDKGTGDSDE----------------FAFEPGSIFVEFLRKEAACTAAHS 470
            T          ++G GD  E                F FEPGS+ VEFLR+EAAC AAHS
Sbjct: 292  TDKAEKPGRYSEQGAGDVTEDRPEKEAQAVGTSDTGFVFEPGSVLVEFLREEAACMAAHS 351

Query: 469  LHGRTYGEQIVTAGFFPYDKYTARF 395
            LHGR +G + V AG+ PYD Y  ++
Sbjct: 352  LHGRRFGNRTVHAGYAPYDLYLQKY 376


>ref|NP_001170011.1| uncharacterized protein LOC100383918 [Zea mays]
            gi|224032879|gb|ACN35515.1| unknown [Zea mays]
          Length = 331

 Score = 94.0 bits (232), Expect = 9e-17
 Identities = 79/265 (29%), Positives = 111/265 (41%), Gaps = 46/265 (17%)
 Frame = -1

Query: 1051 DDVRLECTRFGTVKEVNLVRYNDNQVAVAGASETCNNEDSIEIECRTEDPSDQ-----HQ 887
            +DVR+ECTRFG VK VN+V Y       AG S    N   ++IEC     ++       +
Sbjct: 70   EDVRVECTRFGAVKSVNVVEY-----PAAGVSAAEENIVELKIECTEFSDTENIAKAVSE 124

Query: 886  HSQDLMPEGDI---GSAGDT------------------SNGS---GEDVLRIDDSSAIEI 779
            +S  ++P  D+     A DT                  SN +    E  +  +D+   E 
Sbjct: 125  YSVPIIPSIDVLNHSVASDTKDVDLIPESQDQKDKHLPSNAALCESEAPVADEDAELDET 184

Query: 778  QHIADVEIGQQLESNKV-TSMNEEEIXXXXXXXXPKLDMVDAEIGSSSCRNVTAAEPAES 602
            Q  A +   Q  E++    +++E +            D    E      R      PA  
Sbjct: 185  QSRAALPTPQHAEADHTEAAVDENKHTGAGKVTATATDDDAVEKSHGDPRTSETCNPAGP 244

Query: 601  TIDRMDSRTVVDKGTGDSDE----------------FAFEPGSIFVEFLRKEAACTAAHS 470
            T          ++G GD  E                F FEPGS+ VEFLR+EAAC AAHS
Sbjct: 245  TDKAEKPGRYSEQGAGDVTEDRPEKEAQAVGTSDTGFVFEPGSVLVEFLREEAACMAAHS 304

Query: 469  LHGRTYGEQIVTAGFFPYDKYTARF 395
            LHGR +G + V AG+ PYD Y  ++
Sbjct: 305  LHGRRFGNRTVHAGYAPYDLYLQKY 329


>ref|XP_006420295.1| hypothetical protein CICLE_v10004248mg [Citrus clementina]
            gi|557522168|gb|ESR33535.1| hypothetical protein
            CICLE_v10004248mg [Citrus clementina]
          Length = 967

 Score = 93.2 bits (230), Expect = 2e-16
 Identities = 75/266 (28%), Positives = 118/266 (44%), Gaps = 47/266 (17%)
 Frame = -1

Query: 1051 DDVRLECTRFGTVKEVNLVRYNDNQV------------AVAGASETCNNEDSIEIECRTE 908
            +DVRLEC RFGTVK VN+V+Y D+ +            A AG  +   N+++ E   R E
Sbjct: 706  EDVRLECARFGTVKSVNVVKYGDSNISTIQACEGNENTASAGVGQNLTNDETNEKGERLE 765

Query: 907  DPSDQHQ----------HSQDLMPEGDIGSAGDTSNGSG------EDVLRIDDSSAIEIQ 776
            + +D              S+++M  G++ +  D    SG        +  +D   A+E Q
Sbjct: 766  EVTDHKSIKNNELEILNDSKEVMEAGEVNNVKDNRPASGTMGDEPSQLCELDTDMAVEYQ 825

Query: 775  ------HIADVEIGQQLES---------NKVTSMNEEEIXXXXXXXXPKLDMVDAEIGSS 641
                   I    +  Q+ +         +KVT   + E          K D+   E+  +
Sbjct: 826  ARDSTSEIVSQGVPTQVNTLKDSPCAHDDKVTCNIQLEHMSEENKSSAKEDLNLEEVNGN 885

Query: 640  SCRNVTAAEPAESTIDRMDSRTVVDKGTGDSDE----FAFEPGSIFVEFLRKEAACTAAH 473
            S     A   A + +    S   V+ G  ++ +      FEPG +FVE++R EA+C AAH
Sbjct: 886  S----EAFTGASNEMGMQSS--AVENGDNENQDPNQGHIFEPGCVFVEYMRAEASCMAAH 939

Query: 472  SLHGRTYGEQIVTAGFFPYDKYTARF 395
            SLH R + ++IV   + P + Y ARF
Sbjct: 940  SLHRRLFDDRIVAVEYIPLNLYRARF 965


>ref|XP_002465895.1| hypothetical protein SORBIDRAFT_01g047730 [Sorghum bicolor]
            gi|241919749|gb|EER92893.1| hypothetical protein
            SORBIDRAFT_01g047730 [Sorghum bicolor]
          Length = 969

 Score = 89.7 bits (221), Expect = 2e-15
 Identities = 78/260 (30%), Positives = 113/260 (43%), Gaps = 41/260 (15%)
 Frame = -1

Query: 1051 DDVRLECTRFGTVKEVNLVRYNDNQVAVAGASETCNNEDSIEIECR----TEDPS----- 899
            +DVR+ECTRFG VK V++V Y        G S   +N   ++IEC     TE+ +     
Sbjct: 714  EDVRVECTRFGAVKSVHVVEY-----PAGGGSAAEDNTVELKIECTEFADTENIAKAVSE 768

Query: 898  ---------DQHQHSQ-------DLMPEG----DIGSAGDTSNGSGEDVLRIDDSSAIEI 779
                     D   HS+       D +PE     D     + +    +  +  +D+   E 
Sbjct: 769  YSVPINQSIDVLNHSEASETKDVDPIPESQDHKDKHLPSNAALCECKAPVADEDAELDET 828

Query: 778  QHIADVEIGQQLE-SNKVTSMNEEEIXXXXXXXXPKLDMVDAEIGSSSCRNVTAAEPAES 602
            Q  A +   Q  E  +   +++E +           +D    E      R      PAE 
Sbjct: 829  QSRAALPTSQHAEVGHTEAAVDENKHTGAGEVTATVMDDDAVEKSHQDPRTSETCSPAEP 888

Query: 601  TIDRMDSRTVVDKGTGDSDE-----------FAFEPGSIFVEFLRKEAACTAAHSLHGRT 455
            T D+++     D  T +  E           F FEPGS+ VEF+RKEAAC AAHSLHGR 
Sbjct: 889  T-DKVEKPGSADDVTENRPEKVPAVETSDTGFVFEPGSVLVEFMRKEAACIAAHSLHGRR 947

Query: 454  YGEQIVTAGFFPYDKYTARF 395
            +G + V AG+ PYD Y  ++
Sbjct: 948  FGNRTVHAGYAPYDLYLQKY 967


>ref|XP_006649367.1| PREDICTED: splicing factor U2af large subunit B-like isoform X1
            [Oryza brachyantha] gi|573923585|ref|XP_006649368.1|
            PREDICTED: splicing factor U2af large subunit B-like
            isoform X2 [Oryza brachyantha]
            gi|573923587|ref|XP_006649369.1| PREDICTED: splicing
            factor U2af large subunit B-like isoform X3 [Oryza
            brachyantha]
          Length = 957

 Score = 86.3 bits (212), Expect = 2e-14
 Identities = 69/240 (28%), Positives = 103/240 (42%), Gaps = 21/240 (8%)
 Frame = -1

Query: 1051 DDVRLECTRFGTVKEVNLVRYNDNQVAVAGASETCNNEDSIEIECRTEDPSDQHQHS--- 881
            +DVR+EC RFG VK +N+V Y  +  +  G   T + + S + E      +  H  +   
Sbjct: 717  EDVRVECARFGAVKSINVVEYPGSSDSTTGDIITVSEDGSAKNEPEEYGGNVNHTDTGAE 776

Query: 880  -----QDLMPEGDIGSAGDTSNGSGEDVLRIDDSSAIEIQHIADVEIGQQLESNKVTSMN 716
                 Q      D       S   G D   +D     +     D    Q  E+++  +++
Sbjct: 777  CSVLNQSTCEVQDPVKLDIDSIPKGADHNELDRLRKCDAPTAGDENTDQSAEADQTDTID 836

Query: 715  EE-EIXXXXXXXXPKLDMVDAEIGSSSCRNVTAAEP------------AESTIDRMDSRT 575
             +              D +  EI  SS     A +P            +ES  ++  +  
Sbjct: 837  ADVRAVDDGTLEKGHADPLIPEICCSSPPGDGADKPGRENEQQCGTGVSESNTEKAPAVD 896

Query: 574  VVDKGTGDSDEFAFEPGSIFVEFLRKEAACTAAHSLHGRTYGEQIVTAGFFPYDKYTARF 395
              D  +  S   A E G I VEFLRKEAACTAAHSLHGR +G +IV+AG+ P+D Y  ++
Sbjct: 897  ARDSASASSTS-ALEAGCILVEFLRKEAACTAAHSLHGRRFGSRIVSAGYAPHDLYLQKY 955


>ref|NP_850210.2| RNA recognition motif-containing protein [Arabidopsis thaliana]
            gi|330253741|gb|AEC08835.1| RNA recognition
            motif-containing protein [Arabidopsis thaliana]
          Length = 322

 Score = 86.3 bits (212), Expect = 2e-14
 Identities = 58/222 (26%), Positives = 96/222 (43%), Gaps = 3/222 (1%)
 Frame = -1

Query: 1051 DDVRLECTRFGTVKEVNLVRYNDNQVAVAGASETCNNE--DSIEIECRTEDPSDQ-HQHS 881
            +DVRLEC RFG +K +N++ +    + V+  +   N E  DS E+     +  D+  + +
Sbjct: 117  EDVRLECARFGVIKSINILEHKSKDITVSETNPLLNLESTDSKEMNVSVIEEKDEGSEKA 176

Query: 880  QDLMPEGDIGSAGDTSNGSGEDVLRIDDSSAIEIQHIADVEIGQQLESNKVTSMNEEEIX 701
            +D+    D+       + +GED L          +  +D       + N+     E+E  
Sbjct: 177  EDIADNVDLAEVVMPDSLTGEDKL---------CEPCSDTAAETSTQENEDLHSTEQE-- 225

Query: 700  XXXXXXXPKLDMVDAEIGSSSCRNVTAAEPAESTIDRMDSRTVVDKGTGDSDEFAFEPGS 521
                      + +  E   +   N        +   R D+   +++   +  E  FE G 
Sbjct: 226  --------HCEKIVEESAQAEAENPQEVASVRTVKTRWDAGDKIEEEQEEDPEDVFETGC 277

Query: 520  IFVEFLRKEAACTAAHSLHGRTYGEQIVTAGFFPYDKYTARF 395
            IF+E+ R EA C AAHSLHGR Y  +IV A +   + Y  RF
Sbjct: 278  IFIEYRRPEATCDAAHSLHGRLYDNRIVKAEYVSKELYQIRF 319


>gb|EEC74478.1| hypothetical protein OsI_09930 [Oryza sativa Indica Group]
          Length = 1128

 Score = 86.3 bits (212), Expect = 2e-14
 Identities = 72/247 (29%), Positives = 108/247 (43%), Gaps = 28/247 (11%)
 Frame = -1

Query: 1051 DDVRLECTRFGTVKEVNLVRYNDNQVAVAGASETCNNEDSIEIECR--------TEDPSD 896
            +DVR+EC RFG VK +N+V Y  +     G + T   + S +IE +        TE   +
Sbjct: 881  EDVRVECARFGAVKSINVVEYPASSDNTTGDTITECEDGSTKIEPKEYGGNVSCTETGVE 940

Query: 895  QHQHSQDL-MPEGDIGSAGDT------SNGSGEDVLRIDDSSAIEIQHIADVEIGQQLES 737
                +Q   +P+  I    D       S   G D   +D     +     D    Q +E+
Sbjct: 941  CSVLNQSTDVPDPSICEVQDPVELDTDSIPKGRDHKNLDTRGECDAPTAGDENTDQGVEA 1000

Query: 736  NKVTSMN-EEEIXXXXXXXXPKLDMVDAEIGSSSCRNVTA------------AEPAESTI 596
            ++  S + +++            D    E   S+     A            A  +ES  
Sbjct: 1001 DQTDSTDAQDDARGTIERGHADADQASLETSCSTAPGDGADKSGRENEQQGGAGVSESNT 1060

Query: 595  DRMDSRTVVDKGTGDSDEFAFEPGSIFVEFLRKEAACTAAHSLHGRTYGEQIVTAGFFPY 416
            ++  +    D     S+  A E G I VEFLRKEAACTAAHSLHGR +G +IV+AG+ P+
Sbjct: 1061 EKAPAVDARDNALA-SNTSALEAGCILVEFLRKEAACTAAHSLHGRRFGSRIVSAGYAPH 1119

Query: 415  DKYTARF 395
            D Y  ++
Sbjct: 1120 DLYLQKY 1126


>ref|XP_004985776.1| PREDICTED: uncharacterized protein LOC101753519 [Setaria italica]
          Length = 973

 Score = 84.7 bits (208), Expect = 5e-14
 Identities = 75/263 (28%), Positives = 105/263 (39%), Gaps = 44/263 (16%)
 Frame = -1

Query: 1051 DDVRLECTRFGTVKEVNLVRY--------NDNQVAV------------------AGASET 950
            +DVR+EC RFG VK VN+V Y         DN V +                  A A   
Sbjct: 710  EDVRIECARFGAVKSVNVVEYAARSDNTAEDNIVELEDRPVKIECPGFGDIENTAKAGSE 769

Query: 949  C----------NNEDSIEIECR-----TEDPSDQHQHSQDLMPEGDIGSAGDTSNGSGED 815
            C          N+ D+ E + R     ++D  D+H  S     E +   A   ++  G  
Sbjct: 770  CSMPNQSIDILNHSDATETKDRDLIPESQDQKDKHIPSNAAHCESEAPVADGHTDIDGTQ 829

Query: 814  V---LRIDDSSAIEIQHIADVEIGQQLESNKVTSMNEEEIXXXXXXXXPKLDMVDAEIGS 644
                L I   S  +    A  E          T+ +++ +               AE G 
Sbjct: 830  TRAALPISQHSETDHTEAAADENKHTAVEATTTAKDDDAVEKRHQDPRTSEICSPAEPGD 889

Query: 643  SSCRNVTAAEPAESTIDRMDSRTVVDKGTGDSDEFAFEPGSIFVEFLRKEAACTAAHSLH 464
               +     E     +    +  V    T D+  F FEPGS+ VEF+RKEAAC AAHSLH
Sbjct: 890  EMEKPGRDCEQDADDVTEDHAEKVPAVETSDT-AFVFEPGSVLVEFMRKEAACMAAHSLH 948

Query: 463  GRTYGEQIVTAGFFPYDKYTARF 395
            GR +G + V AG+ PYD Y  ++
Sbjct: 949  GRRFGSRTVYAGYAPYDLYLQKY 971


>ref|NP_001048907.1| Os03g0138100 [Oryza sativa Japonica Group]
            gi|113547378|dbj|BAF10821.1| Os03g0138100 [Oryza sativa
            Japonica Group]
          Length = 404

 Score = 84.0 bits (206), Expect = 9e-14
 Identities = 71/247 (28%), Positives = 108/247 (43%), Gaps = 28/247 (11%)
 Frame = -1

Query: 1051 DDVRLECTRFGTVKEVNLVRYNDNQVAVAGASETCNNEDSIEIECR--------TEDPSD 896
            +DVR+EC RFG VK +N+V+Y  +     G + T   + S +IE +        TE   +
Sbjct: 157  EDVRVECARFGAVKSINVVKYPASSDNTTGDTITECEDGSTKIEPKEYGGNVSCTETGVE 216

Query: 895  QHQHSQDL-MPEGDIGSAGDT------SNGSGEDVLRIDDSSAIEIQHIADVEIGQQLES 737
                +Q   +P+  I    D       S   G D   +D     +     D    Q +E+
Sbjct: 217  CSVLNQSTDVPDPSICEVQDPVELDTDSIPKGRDHKNLDTRGECDAPTAGDENTDQGVEA 276

Query: 736  NKVTSMN-EEEIXXXXXXXXPKLDMVDAEIGSSSCRNVTA------------AEPAESTI 596
            ++  S + +++            D    E   S+     A            A  +ES  
Sbjct: 277  DQTDSTDAQDDARGTIERGHADADPASLETSCSTAPGDGADKSGRENEQQGGAGVSESNT 336

Query: 595  DRMDSRTVVDKGTGDSDEFAFEPGSIFVEFLRKEAACTAAHSLHGRTYGEQIVTAGFFPY 416
            ++  +    D     S+  A E G I VEFLRKEAAC AAHSLHGR +G +IV+AG+ P+
Sbjct: 337  EKAPAVDARDNALA-SNTSALEAGCILVEFLRKEAACIAAHSLHGRRFGSRIVSAGYAPH 395

Query: 415  DKYTARF 395
            D Y  ++
Sbjct: 396  DLYLQKY 402


>gb|ABF93875.1| RNA recognition motif family protein, expressed [Oryza sativa
            Japonica Group]
          Length = 964

 Score = 84.0 bits (206), Expect = 9e-14
 Identities = 71/247 (28%), Positives = 108/247 (43%), Gaps = 28/247 (11%)
 Frame = -1

Query: 1051 DDVRLECTRFGTVKEVNLVRYNDNQVAVAGASETCNNEDSIEIECR--------TEDPSD 896
            +DVR+EC RFG VK +N+V+Y  +     G + T   + S +IE +        TE   +
Sbjct: 717  EDVRVECARFGAVKSINVVKYPASSDNTTGDTITECEDGSTKIEPKEYGGNVSCTETGVE 776

Query: 895  QHQHSQDL-MPEGDIGSAGDT------SNGSGEDVLRIDDSSAIEIQHIADVEIGQQLES 737
                +Q   +P+  I    D       S   G D   +D     +     D    Q +E+
Sbjct: 777  CSVLNQSTDVPDPSICEVQDPVELDTDSIPKGRDHKNLDTRGECDAPTAGDENTDQGVEA 836

Query: 736  NKVTSMN-EEEIXXXXXXXXPKLDMVDAEIGSSSCRNVTA------------AEPAESTI 596
            ++  S + +++            D    E   S+     A            A  +ES  
Sbjct: 837  DQTDSTDAQDDARGTIERGHADADPASLETSCSTAPGDGADKSGRENEQQGGAGVSESNT 896

Query: 595  DRMDSRTVVDKGTGDSDEFAFEPGSIFVEFLRKEAACTAAHSLHGRTYGEQIVTAGFFPY 416
            ++  +    D     S+  A E G I VEFLRKEAAC AAHSLHGR +G +IV+AG+ P+
Sbjct: 897  EKAPAVDARDNALA-SNTSALEAGCILVEFLRKEAACIAAHSLHGRRFGSRIVSAGYAPH 955

Query: 415  DKYTARF 395
            D Y  ++
Sbjct: 956  DLYLQKY 962


>ref|XP_004296390.1| PREDICTED: splicing factor U2AF 50 kDa subunit-like [Fragaria vesca
            subsp. vesca]
          Length = 542

 Score = 81.6 bits (200), Expect = 5e-13
 Identities = 69/252 (27%), Positives = 109/252 (43%), Gaps = 33/252 (13%)
 Frame = -1

Query: 1051 DDVRLECTRFGTVKEVNLVRYNDNQVAVAGASETCNNEDS--------IEIECRTEDPSD 896
            +DVRLEC RFG VK V +V++ +N V   GA E  NN +S         E   +T D  D
Sbjct: 291  EDVRLECARFGMVKSVKIVKHANNHVVTTGACEAVNNVESGGQWQNYSKEKGAKT-DTLD 349

Query: 895  QHQHSQDLMPEGDIGSAGDTSNGSGEDVLRID-DSSAIEIQHIADVEIGQQLESNKVTS- 722
            +H   +D+     +   G+       +   +  D  A ++      +IGQ  +  ++   
Sbjct: 350  EHI-DKDVKVTSGVKLTGELKEDEVPESNCLGFDKPADDLVEDKSCQIGQLDKDTEIQGS 408

Query: 721  --MNEEEIXXXXXXXXPKLDMVDAEIGSSSCRNVTAAEPAE----------STIDRMDSR 578
              ++ ++          K D  +    +S    +  + P E           T+D + + 
Sbjct: 409  DDLSNQDSEELTNLPNSKEDASECNDKTSEVTRIQNSMPEEVDGENQDTFAGTVDNVGAE 468

Query: 577  T-------VVDKGTGDSDEF----AFEPGSIFVEFLRKEAACTAAHSLHGRTYGEQIVTA 431
            T         ++  G   +F     FEPGS+FVEF R EA+  AAH LHGR + ++IVT 
Sbjct: 469  TDSILESETKEQHNGKESDFDPGSIFEPGSVFVEFGRTEASWMAAHCLHGRVFEDRIVTV 528

Query: 430  GFFPYDKYTARF 395
             +   D Y A F
Sbjct: 529  EYVASDHYRAHF 540


>ref|XP_002528813.1| splicing factor u2af large subunit, putative [Ricinus communis]
            gi|223531725|gb|EEF33547.1| splicing factor u2af large
            subunit, putative [Ricinus communis]
          Length = 844

 Score = 81.6 bits (200), Expect = 5e-13
 Identities = 71/243 (29%), Positives = 102/243 (41%), Gaps = 24/243 (9%)
 Frame = -1

Query: 1051 DDVRLECTRFGTVKEVNLVRYNDNQVAVAGASETCNNEDSIEIECRTEDPSDQHQHSQDL 872
            +DVRLEC RFGTVK VN+VR   N       SE C   + ++     ++      +++  
Sbjct: 603  EDVRLECARFGTVKSVNVVR---NGPIPIFTSEACKMNEDMDSAGPQQNLGGDETNAETE 659

Query: 871  MPEGDIG----SAGDTSN-----GSG-EDVLRIDDSSAIEIQHIADVEIGQQLESNKVTS 722
               GDI      A DT +     G+G ED    DD    E   +   +    +E+     
Sbjct: 660  KTIGDIHHEPVEANDTDDDKPVEGNGVEDDKPADDLMEDESSQLGQFDSNMAVENLSGDG 719

Query: 721  MNE-EEIXXXXXXXXPKLDMVDAEIGSSSCRNVTAAE---PAESTIDRM--DSRTVVDKG 560
            + E +E          + D +  ++        T AE   P +  +     +   V    
Sbjct: 720  VPEPQEPIPIQQTSKDESDCLHGKVTDDVQMKDTIAEHKLPIQQELKESFTNDHAVESDA 779

Query: 559  TGDSDE--------FAFEPGSIFVEFLRKEAACTAAHSLHGRTYGEQIVTAGFFPYDKYT 404
            TG  D         + F P  +FVEF R EA+C AAH LHGR Y  + VT G+ P D Y 
Sbjct: 780  TGKGDHEEHNCDLSYIFYPSCVFVEFGRTEASCIAAHCLHGRLYDGRTVTVGYIPLDVYR 839

Query: 403  ARF 395
            +RF
Sbjct: 840  SRF 842


>ref|XP_006857448.1| hypothetical protein AMTR_s00067p00176230 [Amborella trichopoda]
            gi|548861541|gb|ERN18915.1| hypothetical protein
            AMTR_s00067p00176230 [Amborella trichopoda]
          Length = 928

 Score = 80.9 bits (198), Expect = 8e-13
 Identities = 75/273 (27%), Positives = 115/273 (42%), Gaps = 54/273 (19%)
 Frame = -1

Query: 1051 DDVRLECTRFGTVKEVNLVRYNDNQVAVAGASETCNNEDSIEIECRTEDPSDQHQHSQDL 872
            +D+R+ECTRFGTVK VN++R + +       + T  N DS   +   +DP+ Q     D 
Sbjct: 661  EDIRIECTRFGTVKSVNIIRLSKSSEEAPNMTITTGNNDSPGPK---QDPT-QIMEKLDS 716

Query: 871  MPEGDIGSAGDTSNGSGEDVLRIDDSSAIEIQHIADVEIGQQ--LESNKVTSMNEEEIXX 698
            +    +G+  D+ +   +      D    +   I ++EI +    E+ ++ +  +E+   
Sbjct: 717  VNSDILGAKQDSLHELEKSDPVNCDMQMSDQDPIQEIEIWEPGYSENVEIVASIDEKTRD 776

Query: 697  XXXXXXPK----LDMVDAEIGSSSCRNVTAA--------------------EPAESTI-- 596
                   K    L   + E G+S+C   T A                    EP  S    
Sbjct: 777  LEMITDDKDEHLLKNKEDESGTSNCEQTTLAGDDASDQLPCSLSLQYNNAHEPTFSLSQQ 836

Query: 595  DRM--------------------------DSRTVVDKGTGDSDEFAFEPGSIFVEFLRKE 494
            DR+                          D +T+++     SD  AF+PG + VE+ RKE
Sbjct: 837  DRVSEEFQKKCEAPGSMKLEDFDMGSSGDDQKTMINPS---SDFDAFQPGCVLVEYSRKE 893

Query: 493  AACTAAHSLHGRTYGEQIVTAGFFPYDKYTARF 395
            AAC AAH LHGR YG+  V   +  YD Y ARF
Sbjct: 894  AACLAAHCLHGRLYGDHRVAVEYVAYDLYRARF 926


>ref|XP_006410488.1| hypothetical protein EUTSA_v10016911mg [Eutrema salsugineum]
            gi|557111657|gb|ESQ51941.1| hypothetical protein
            EUTSA_v10016911mg [Eutrema salsugineum]
          Length = 333

 Score = 80.5 bits (197), Expect = 1e-12
 Identities = 65/226 (28%), Positives = 99/226 (43%), Gaps = 7/226 (3%)
 Frame = -1

Query: 1051 DDVRLECTRFGTVKEVNLVRYNDNQVAVAGASETCNNEDSIEIECRTEDPSDQHQHSQDL 872
            +DVRLEC RFG +K +N+V +    ++ +    + N E  +      E+  +    + D+
Sbjct: 117  EDVRLECARFGVIKSINIVEHEIKDISGSKTDASLNPESKVMNVSVIEEKDEGSTKADDI 176

Query: 871  MPEGDIGSAGDTSNGSGEDVLR---IDDSSAIEIQHIADVEIGQQLESNKVTSMNEEEIX 701
            +   D G A    + +GED L     D ++ I      D    +     KV   + ++  
Sbjct: 177  VDNVDPGEAVRPESCTGEDKLSEPCSDTATEINTPANEDHASTEPDHCEKVVGESAQD-- 234

Query: 700  XXXXXXXPKLDMVDAEIGSSSCRNVTAAEPAESTIDRMDSRTVVDKGTGDSDE----FAF 533
                    + + V  E+GSS   + T   P E        +T  D G    +E      F
Sbjct: 235  --------EAENVQ-EVGSSRAHDETEI-PQEEVGSGRAVKTRWDAGDKMEEEEDPKDVF 284

Query: 532  EPGSIFVEFLRKEAACTAAHSLHGRTYGEQIVTAGFFPYDKYTARF 395
            EPG IF+E+ R EA   AAHSLHGR Y  +IV A +   + Y  RF
Sbjct: 285  EPGCIFIEYRRPEATRDAAHSLHGRLYENRIVKAEYVSKEVYQIRF 330


>gb|EXB46745.1| Splicing factor U2AF 50 kDa subunit [Morus notabilis]
          Length = 931

 Score = 79.7 bits (195), Expect = 2e-12
 Identities = 65/264 (24%), Positives = 103/264 (39%), Gaps = 45/264 (17%)
 Frame = -1

Query: 1051 DDVRLECTRFGTVKEVNLVRYNDNQVAVAGASETCNNEDSIEIE---------------- 920
            +DVRLEC RFG VK VN+V+ +++Q+  +G  E  N   + E                  
Sbjct: 676  EDVRLECVRFGNVKSVNVVKQSNSQITSSGICELNNRAQTGEFGPNLGCEGNNAKTENFG 735

Query: 919  -CRTEDPSD----QHQHSQDLMPEGDIGSAGDTSNGSGEDVLRIDDSSAIEIQHIADVEI 755
             C   +PS     +   +   + E ++     T N   ++++  D S           + 
Sbjct: 736  GCTNGEPSGIAALEFVKNDQELKENEVPKDSGTDNRQLDNIIAEDKSC----------QT 785

Query: 754  GQQLESNKVTSMNEEEIXXXXXXXXPKLDMVDAEIGSSSCRNVTAAEPAESTIDRMDSRT 575
            GQ        ++  EE+           + +D ++GS++  +    E   +  D      
Sbjct: 786  GQLTSDENEPNIIPEELPTQLNSPREVSEQLDDKVGSATPTDTHGMEKKITGEDNSTRGD 845

Query: 574  VVDKGTGDSDEF------------------------AFEPGSIFVEFLRKEAACTAAHSL 467
               K  G  +EF                         FE G + VEF R EAACTAAH L
Sbjct: 846  TDSKKQGTVEEFDGFMETESNDKVMDDSKEQFDLGSIFEVGCVLVEFGRTEAACTAAHCL 905

Query: 466  HGRTYGEQIVTAGFFPYDKYTARF 395
            HGR + ++IV+  +   D Y  RF
Sbjct: 906  HGRLFDDRIVSVEYVALDHYKTRF 929


>gb|ABF93874.1| RNA recognition motif family protein, expressed [Oryza sativa
            Japonica Group]
          Length = 964

 Score = 79.3 bits (194), Expect = 2e-12
 Identities = 70/247 (28%), Positives = 107/247 (43%), Gaps = 28/247 (11%)
 Frame = -1

Query: 1051 DDVRLECTRFGTVKEVNLVRYNDNQVAVAGASETCNNEDSIEIECR--------TEDPSD 896
            +DVR+E  RFG VK +N+V+Y  +     G + T   + S +IE +        TE   +
Sbjct: 717  EDVRVEYDRFGAVKSINVVKYPASSDNTTGDTITECEDGSTKIEPKEYGGNVSCTETGVE 776

Query: 895  QHQHSQDL-MPEGDIGSAGDT------SNGSGEDVLRIDDSSAIEIQHIADVEIGQQLES 737
                +Q   +P+  I    D       S   G D   +D     +     D    Q +E+
Sbjct: 777  CSVLNQSTDVPDPSICEVQDPVELDTDSIPKGRDHKNLDTRGECDAPTAGDENTDQGVEA 836

Query: 736  NKVTSMN-EEEIXXXXXXXXPKLDMVDAEIGSSSCRNVTA------------AEPAESTI 596
            ++  S + +++            D    E   S+     A            A  +ES  
Sbjct: 837  DQTDSTDAQDDARGTIERGHADADPASLETSCSTAPGDGADKSGRENEQQGGAGVSESNT 896

Query: 595  DRMDSRTVVDKGTGDSDEFAFEPGSIFVEFLRKEAACTAAHSLHGRTYGEQIVTAGFFPY 416
            ++  +    D     S+  A E G I VEFLRKEAAC AAHSLHGR +G +IV+AG+ P+
Sbjct: 897  EKAPAVDARDNALA-SNTSALEAGCILVEFLRKEAACIAAHSLHGRRFGSRIVSAGYAPH 955

Query: 415  DKYTARF 395
            D Y  ++
Sbjct: 956  DLYLQKY 962


>ref|XP_003558854.1| PREDICTED: uncharacterized protein LOC100840355 [Brachypodium
            distachyon]
          Length = 840

 Score = 79.0 bits (193), Expect = 3e-12
 Identities = 67/257 (26%), Positives = 109/257 (42%), Gaps = 42/257 (16%)
 Frame = -1

Query: 1051 DDVRLECTRFGTVKEVNLVRYNDNQVAVA---------GASETCNNEDSIEI--ECRTED 905
            +D+R+EC RFG VK +N+V Y  +  +           G  +    E   EI  EC +  
Sbjct: 578  EDIRMECARFGAVKSINIVEYPASSDSTLQDIIVEPKDGPVKLEPTEHCAEIVTECSSPS 637

Query: 904  PSDQHQHSQDLMPEGDIGSAGDTSNGSGE--DVLRIDDSSAIE----IQHI----ADVEI 755
             S       D     D+      S    E   +   D  +A++    + HI    AD  +
Sbjct: 638  KSISVPGHSDPAETKDVDHPSSESQEHKELDTLCECDVPAAVDQYTDLDHIHATAADPAL 697

Query: 754  GQQLESNKVTSMNEEEIXXXXXXXXPKLDMVDAEIGSSS------CRNVTAAEPAEST-- 599
             Q +E++ + S     +              D+ +G +       C + T  +  +++  
Sbjct: 698  DQHMEADHMDSKQAVHMDSTQADHHATTVDDDSAVGHAGPRTLEICSSTTPGDVVDTSER 757

Query: 598  ---------IDRMDSRTVVDKGTGD----SDEFAFEPGSIFVEFLRKEAACTAAHSLHGR 458
                     +    +  + + GT D    S     E GSI VEF+RKEAAC AAHSLHGR
Sbjct: 758  ENQQQGTNDVSESGAEQLPEAGTRDDALVSGTIMLEAGSILVEFMRKEAACMAAHSLHGR 817

Query: 457  TYGEQIVTAGFFPYDKY 407
            ++G++ ++AG+ P+D Y
Sbjct: 818  SFGDRSLSAGYAPHDLY 834