BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00033644
         (334 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001147355.1| ATP-dependent Clp protease proteolytic subun...    57   2e-06
gb|ABK23566.1| unknown [Picea sitchensis]                              57   2e-06
gb|AFW63098.1| ATP-dependent Clp protease proteolytic subunit [Z...    57   3e-06
ref|NP_001141255.1| uncharacterized protein LOC100273342 [Zea ma...    57   3e-06
gb|ABK26796.1| unknown [Picea sitchensis]                              57   3e-06
ref|XP_006652537.1| PREDICTED: ATP-dependent Clp protease proteo...    56   4e-06
ref|XP_004976290.1| PREDICTED: ATP-dependent Clp protease proteo...    56   4e-06
dbj|BAJ95352.1| predicted protein [Hordeum vulgare subsp. vulgar...    56   4e-06
dbj|BAJ90210.1| predicted protein [Hordeum vulgare subsp. vulgare]     56   4e-06
dbj|BAJ94335.1| predicted protein [Hordeum vulgare subsp. vulgare]     56   4e-06
gb|ACN34096.1| unknown [Zea mays] gi|414586294|tpg|DAA36865.1| T...    56   4e-06
ref|NP_001150578.1| LOC100284211 [Zea mays] gi|195640324|gb|ACG3...    56   4e-06
gb|EMT11798.1| ATP-dependent Clp protease proteolytic subunit [A...    56   6e-06
ref|XP_003575425.1| PREDICTED: ATP-dependent Clp protease proteo...    56   6e-06
ref|XP_006647566.1| PREDICTED: ATP-dependent Clp protease proteo...    55   1e-05
ref|XP_004953199.1| PREDICTED: ATP-dependent Clp protease proteo...    55   1e-05
ref|NP_001047512.1| Os02g0634500 [Oryza sativa Japonica Group] g...    55   1e-05
ref|XP_002452493.1| hypothetical protein SORBIDRAFT_04g026880 [S...    55   1e-05
gb|ACL53026.1| unknown [Zea mays]                                      55   1e-05
gb|ACG42001.1| ATP-dependent Clp protease proteolytic subunit [Z...    55   1e-05

>ref|NP_001147355.1| ATP-dependent Clp protease proteolytic subunit [Zea mays]
           gi|194700894|gb|ACF84531.1| unknown [Zea mays]
           gi|195610476|gb|ACG27068.1| ATP-dependent Clp protease
           proteolytic subunit [Zea mays]
           gi|413918966|gb|AFW58898.1| ATP-dependent Clp protease
           proteolytic subunit isoform 1 [Zea mays]
           gi|413918967|gb|AFW58899.1| ATP-dependent Clp protease
           proteolytic subunit isoform 2 [Zea mays]
          Length = 260

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 26/35 (74%), Positives = 29/35 (82%)
 Frame = -2

Query: 333 RHTGQPIQRIEQCMERDMDMSPDEAKELGLVDEVI 229
           +HTGQ I RIEQCMERDM M P+EA E GL+DEVI
Sbjct: 190 KHTGQAIDRIEQCMERDMFMDPEEAHEWGLIDEVI 224


>gb|ABK23566.1| unknown [Picea sitchensis]
          Length = 243

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 26/35 (74%), Positives = 30/35 (85%)
 Frame = -2

Query: 333 RHTGQPIQRIEQCMERDMDMSPDEAKELGLVDEVI 229
           +HTGQ I +IE+CMERDM MSP+EAKE GLVD VI
Sbjct: 186 KHTGQSIDKIEKCMERDMFMSPEEAKEFGLVDTVI 220


>gb|AFW63098.1| ATP-dependent Clp protease proteolytic subunit [Zea mays]
          Length = 395

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 24/35 (68%), Positives = 30/35 (85%)
 Frame = -2

Query: 333 RHTGQPIQRIEQCMERDMDMSPDEAKELGLVDEVI 229
           +HT QPI +IEQCMERD+ M PDEA++ GL+DEVI
Sbjct: 321 KHTRQPIDKIEQCMERDLFMDPDEARDWGLIDEVI 355


>ref|NP_001141255.1| uncharacterized protein LOC100273342 [Zea mays]
           gi|194703568|gb|ACF85868.1| unknown [Zea mays]
          Length = 304

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 24/35 (68%), Positives = 30/35 (85%)
 Frame = -2

Query: 333 RHTGQPIQRIEQCMERDMDMSPDEAKELGLVDEVI 229
           +HT QPI +IEQCMERD+ M PDEA++ GL+DEVI
Sbjct: 230 KHTRQPIDKIEQCMERDLFMDPDEARDWGLIDEVI 264


>gb|ABK26796.1| unknown [Picea sitchensis]
          Length = 248

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 26/35 (74%), Positives = 30/35 (85%)
 Frame = -2

Query: 333 RHTGQPIQRIEQCMERDMDMSPDEAKELGLVDEVI 229
           +HTGQ I++IEQ MERD  MSPDEAKE GL+DEVI
Sbjct: 190 KHTGQTIEKIEQFMERDTFMSPDEAKEFGLIDEVI 224


>ref|XP_006652537.1| PREDICTED: ATP-dependent Clp protease proteolytic subunit 2,
           mitochondrial-like, partial [Oryza brachyantha]
          Length = 115

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 25/35 (71%), Positives = 29/35 (82%)
 Frame = -2

Query: 333 RHTGQPIQRIEQCMERDMDMSPDEAKELGLVDEVI 229
           +HTGQ I RIEQCMERDM M P+EA + GL+DEVI
Sbjct: 45  KHTGQAIDRIEQCMERDMFMDPEEAHDWGLIDEVI 79


>ref|XP_004976290.1| PREDICTED: ATP-dependent Clp protease proteolytic subunit 2,
           mitochondrial-like [Setaria italica]
          Length = 298

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 25/35 (71%), Positives = 29/35 (82%)
 Frame = -2

Query: 333 RHTGQPIQRIEQCMERDMDMSPDEAKELGLVDEVI 229
           +HTGQ I RIEQCMERDM M P+EA + GL+DEVI
Sbjct: 228 KHTGQAIDRIEQCMERDMFMDPEEAHDWGLIDEVI 262


>dbj|BAJ95352.1| predicted protein [Hordeum vulgare subsp. vulgare]
           gi|326506866|dbj|BAJ91474.1| predicted protein [Hordeum
           vulgare subsp. vulgare]
          Length = 300

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 31/67 (46%), Positives = 40/67 (59%), Gaps = 6/67 (8%)
 Frame = -2

Query: 333 RHTGQPIQRIEQCMERDMDMSPDEAKELGLVDEVI------VLPLALRC*SRL*WKGGQG 172
           +HTGQ I +IEQCMERD+ M P+EA+E GL+DEVI      ++P  L         GG G
Sbjct: 225 KHTGQNIDKIEQCMERDLFMDPEEAREWGLIDEVIENRPASLMPEGLSAVDPPHHGGGGG 284

Query: 171 TKMKGMD 151
              +G D
Sbjct: 285 PNGRGRD 291


>dbj|BAJ90210.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 285

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 31/67 (46%), Positives = 40/67 (59%), Gaps = 6/67 (8%)
 Frame = -2

Query: 333 RHTGQPIQRIEQCMERDMDMSPDEAKELGLVDEVI------VLPLALRC*SRL*WKGGQG 172
           +HTGQ I +IEQCMERD+ M P+EA+E GL+DEVI      ++P  L         GG G
Sbjct: 210 KHTGQNIDKIEQCMERDLFMDPEEAREWGLIDEVIENRPASLMPEGLSAVDPPHHGGGGG 269

Query: 171 TKMKGMD 151
              +G D
Sbjct: 270 PNGRGRD 276


>dbj|BAJ94335.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 151

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 31/67 (46%), Positives = 40/67 (59%), Gaps = 6/67 (8%)
 Frame = -2

Query: 333 RHTGQPIQRIEQCMERDMDMSPDEAKELGLVDEVI------VLPLALRC*SRL*WKGGQG 172
           +HTGQ I +IEQCMERD+ M P+EA+E GL+DEVI      ++P  L         GG G
Sbjct: 76  KHTGQNIDKIEQCMERDLFMDPEEAREWGLIDEVIENRPASLMPEGLSAVDPPHHGGGGG 135

Query: 171 TKMKGMD 151
              +G D
Sbjct: 136 PNGRGRD 142


>gb|ACN34096.1| unknown [Zea mays] gi|414586294|tpg|DAA36865.1| TPA: ATP-dependent
           Clp protease proteolytic subunit [Zea mays]
          Length = 259

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 25/35 (71%), Positives = 29/35 (82%)
 Frame = -2

Query: 333 RHTGQPIQRIEQCMERDMDMSPDEAKELGLVDEVI 229
           +HTGQ I RIEQCMERDM M P+EA + GL+DEVI
Sbjct: 189 KHTGQAIDRIEQCMERDMFMDPEEAHDWGLIDEVI 223


>ref|NP_001150578.1| LOC100284211 [Zea mays] gi|195640324|gb|ACG39630.1| ATP-dependent
           Clp protease proteolytic subunit [Zea mays]
          Length = 260

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 25/35 (71%), Positives = 29/35 (82%)
 Frame = -2

Query: 333 RHTGQPIQRIEQCMERDMDMSPDEAKELGLVDEVI 229
           +HTGQ I RIEQCMERDM M P+EA + GL+DEVI
Sbjct: 190 KHTGQAIDRIEQCMERDMFMDPEEAHDWGLIDEVI 224


>gb|EMT11798.1| ATP-dependent Clp protease proteolytic subunit [Aegilops tauschii]
          Length = 289

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 24/35 (68%), Positives = 30/35 (85%)
 Frame = -2

Query: 333 RHTGQPIQRIEQCMERDMDMSPDEAKELGLVDEVI 229
           +HTGQ I +IEQCMERD+ M P+EA+E GL+DEVI
Sbjct: 178 KHTGQNIDKIEQCMERDLFMDPEEAREWGLIDEVI 212


>ref|XP_003575425.1| PREDICTED: ATP-dependent Clp protease proteolytic subunit 2,
           mitochondrial-like [Brachypodium distachyon]
          Length = 302

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 24/35 (68%), Positives = 30/35 (85%)
 Frame = -2

Query: 333 RHTGQPIQRIEQCMERDMDMSPDEAKELGLVDEVI 229
           +HTGQ I +IEQCMERD+ M P+EA+E GL+DEVI
Sbjct: 231 KHTGQNIDKIEQCMERDLFMDPEEAREWGLIDEVI 265


>ref|XP_006647566.1| PREDICTED: ATP-dependent Clp protease proteolytic subunit 2,
           mitochondrial-like [Oryza brachyantha]
          Length = 223

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 23/35 (65%), Positives = 30/35 (85%)
 Frame = -2

Query: 333 RHTGQPIQRIEQCMERDMDMSPDEAKELGLVDEVI 229
           +HTGQ I +IEQCMERD+ M P+EA++ GL+DEVI
Sbjct: 151 KHTGQEIDKIEQCMERDLFMDPEEARDWGLIDEVI 185


>ref|XP_004953199.1| PREDICTED: ATP-dependent Clp protease proteolytic subunit 2,
           mitochondrial-like [Setaria italica]
          Length = 304

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 23/35 (65%), Positives = 30/35 (85%)
 Frame = -2

Query: 333 RHTGQPIQRIEQCMERDMDMSPDEAKELGLVDEVI 229
           +HT QPI +IEQCMERD+ M P+EA++ GL+DEVI
Sbjct: 230 KHTRQPIDKIEQCMERDLFMDPEEARDWGLIDEVI 264


>ref|NP_001047512.1| Os02g0634500 [Oryza sativa Japonica Group]
           gi|49388184|dbj|BAD25310.1| unknown protein [Oryza
           sativa Japonica Group] gi|113537043|dbj|BAF09426.1|
           Os02g0634500 [Oryza sativa Japonica Group]
           gi|215692767|dbj|BAG88235.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 298

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 23/35 (65%), Positives = 30/35 (85%)
 Frame = -2

Query: 333 RHTGQPIQRIEQCMERDMDMSPDEAKELGLVDEVI 229
           +HTGQ I +IEQCMERD+ M P+EA++ GL+DEVI
Sbjct: 226 KHTGQEIDKIEQCMERDLFMDPEEARDWGLIDEVI 260


>ref|XP_002452493.1| hypothetical protein SORBIDRAFT_04g026880 [Sorghum bicolor]
           gi|241932324|gb|EES05469.1| hypothetical protein
           SORBIDRAFT_04g026880 [Sorghum bicolor]
          Length = 309

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 23/35 (65%), Positives = 30/35 (85%)
 Frame = -2

Query: 333 RHTGQPIQRIEQCMERDMDMSPDEAKELGLVDEVI 229
           +HT QPI +IEQCMERD+ M P+EA++ GL+DEVI
Sbjct: 237 KHTRQPIDKIEQCMERDLFMDPEEARDWGLIDEVI 271


>gb|ACL53026.1| unknown [Zea mays]
          Length = 302

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 23/35 (65%), Positives = 30/35 (85%)
 Frame = -2

Query: 333 RHTGQPIQRIEQCMERDMDMSPDEAKELGLVDEVI 229
           +HT QPI +IEQCMERD+ M P+EA++ GL+DEVI
Sbjct: 230 KHTRQPIDKIEQCMERDLFMDPEEARDWGLIDEVI 264


>gb|ACG42001.1| ATP-dependent Clp protease proteolytic subunit [Zea mays]
          Length = 302

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 23/35 (65%), Positives = 30/35 (85%)
 Frame = -2

Query: 333 RHTGQPIQRIEQCMERDMDMSPDEAKELGLVDEVI 229
           +HT QPI +IEQCMERD+ M P+EA++ GL+DEVI
Sbjct: 230 KHTRQPIDKIEQCMERDLFMDPEEARDWGLIDEVI 264