BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00033641
         (1151 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006490914.1| PREDICTED: pentatricopeptide repeat-containi...   370   e-100
ref|XP_002274056.1| PREDICTED: pentatricopeptide repeat-containi...   369   2e-99
ref|XP_006445271.1| hypothetical protein CICLE_v10023562mg, part...   362   2e-97
ref|XP_002320719.2| pentatricopeptide repeat-containing family p...   361   3e-97
gb|EOX96228.1| Pentatricopeptide repeat (PPR) superfamily protei...   359   1e-96
gb|EXB76219.1| hypothetical protein L484_025573 [Morus notabilis]     355   1e-95
ref|XP_004514160.1| PREDICTED: pentatricopeptide repeat-containi...   347   4e-93
gb|ESW27348.1| hypothetical protein PHAVU_003G194000g [Phaseolus...   347   5e-93
ref|XP_004133915.1| PREDICTED: pentatricopeptide repeat-containi...   343   7e-92
gb|AHB18411.1| pentatricopeptide repeat-containing protein [Goss...   343   1e-91
gb|AEN99829.1| chlororespiratory reduction 4, partial [Barbarea ...   340   6e-91
gb|AEN99828.1| chlororespiratory reduction 4 [Arabis hirsuta]         338   2e-90
gb|AEN99832.1| chlororespiratory reduction 4 [Capsella bursa-pas...   338   2e-90
gb|AEN99826.1| chlororespiratory reduction 4, partial [Aethionem...   338   2e-90
gb|AEN99840.1| chlororespiratory reduction 4, partial [Olimarabi...   337   4e-90
ref|NP_182060.2| chlororespiratory reduction 4 protein [Arabidop...   337   4e-90
gb|AAB82628.1| hypothetical protein [Arabidopsis thaliana]            337   4e-90
ref|XP_006296085.1| hypothetical protein CARUB_v10025235mg [Caps...   335   2e-89
gb|AEN99834.1| chlororespiratory reduction 4 [Draba nemorosa]         335   2e-89
gb|AEN99827.1| chlororespiratory reduction 4, partial [Aethionem...   335   2e-89

>ref|XP_006490914.1| PREDICTED: pentatricopeptide repeat-containing protein At2g45350,
            chloroplastic-like [Citrus sinensis]
          Length = 634

 Score =  370 bits (951), Expect = e-100
 Identities = 176/356 (49%), Positives = 254/356 (71%), Gaps = 1/356 (0%)
 Frame = -1

Query: 1151 CGRVVDAEDMFEKMPERDVISCTTMINGYMGLGRIDYAKKLFEAMAEKDLITWNTMMDGY 972
            CG++ DA+ +F+KMP+RDV+S   MI+GY  LGR+D A++LF+ M ++D++  N MM GY
Sbjct: 263  CGKMDDAQALFDKMPKRDVVSWANMIDGYAKLGRVDIARRLFDEMPKRDVVACNAMMGGY 322

Query: 971  VKNGLSREALNLFANMRGKDNAAPDNTTLAIVLTALTELGRINDGISIHEYIKRSNLSMD 792
            V+NG S +AL +F NM+ +    PD+ +L IVL+A+ +LG I+ G++IH Y+++   S++
Sbjct: 323  VRNGYSMKALEIFDNMQCELYLHPDDASLVIVLSAIAQLGHIDKGVAIHRYLEKDQFSLN 382

Query: 791  GNLGVALIDMYSKCGRLDDALKVFD-ISANSVDHWNAMISGFACHGHGNXXXXXXXXXXX 615
            G  GVALIDMYSKCG +++A+KVF+ I   SVDHWNAMI+G A HG G            
Sbjct: 383  GKHGVALIDMYSKCGSIENAIKVFEQIEDGSVDHWNAMINGLAIHGLGELAFDLLMEMER 442

Query: 614  XXLKPDDITFIAVLSACSHAGMVDEGLMCFERMQKEHGLEPKVQHYGCMVDILSRAGKLE 435
              ++PDDITF  +L+AC+HAG+V EGL+CFE M++ H LEP++QHYGCMVDIL RAG +E
Sbjct: 443  LSIEPDDITFTGLLNACAHAGLVKEGLLCFELMRRIHKLEPELQHYGCMVDILGRAGHIE 502

Query: 434  EALGLIRSMPMEPNDVVWRSLLSACRNHRDLDMGQKLVQCLTGERIWXXXXXXXXXXXYA 255
             A  LI  MPMEPNDV+WR+LLSACRN+ +L++G+ + + L G               +A
Sbjct: 503  AARNLIEDMPMEPNDVIWRTLLSACRNYENLNVGEPVAKHLIGMDSSNSSSYVLLSNMFA 562

Query: 254  GVGLWGDAWKLRMLMREKNMKKLPGCSSIEVDGKVYEFVVGDQLQTQTQEVNSSLD 87
            G+G+W DA ++R +M+E+N+KKLPGCS IE++G V+EF V D+ + Q +++   LD
Sbjct: 563  GLGMWNDARRVRSMMKERNLKKLPGCSWIELEGVVHEFFVRDKSRLQVRDIYYMLD 618



 Score =  103 bits (258), Expect = 1e-19
 Identities = 83/303 (27%), Positives = 153/303 (50%), Gaps = 39/303 (12%)
 Frame = -1

Query: 1151 CGRVVDAEDMFEKMPERDVISCTTMINGYMGLGRIDYAKKLFEAM--AEKDLITWNTMMD 978
            CG +  A  +F+KM  RD +S  +MI+GY+  G I+ A++LF++M   E++LI+WN++++
Sbjct: 167  CGYLEFARQLFDKMGIRDSVSYNSMIDGYVKSGNIESARELFDSMPIRERNLISWNSVLN 226

Query: 977  GY--VKNGLSREALNLFANMRGKDNAAPDNTTLAIVLTALTELGRINDGISIHEYIKRSN 804
            GY  +K+GL + A  +F  M  +D  + ++     +L    + G+++D  ++ + + + +
Sbjct: 227  GYAQLKSGL-QFAWQIFEKMPERDLISWNS-----MLHGCVKCGKMDDAQALFDKMPKRD 280

Query: 803  LSMDGNLGVALIDMYSKCGRLDDALKVFD-ISANSVDHWNAMISGFACHGHG-NXXXXXX 630
            +    N    +ID Y+K GR+D A ++FD +    V   NAM+ G+  +G+         
Sbjct: 281  VVSWAN----MIDGYAKLGRVDIARRLFDEMPKRDVVACNAMMGGYVRNGYSMKALEIFD 336

Query: 629  XXXXXXXLKPDDITFIAVLSACSHAGMVDEGLMCFERMQKE-------HGL--------- 498
                   L PDD + + VLSA +  G +D+G+     ++K+       HG+         
Sbjct: 337  NMQCELYLHPDDASLVIVLSAIAQLGHIDKGVAIHRYLEKDQFSLNGKHGVALIDMYSKC 396

Query: 497  --------------EPKVQHYGCMVDILSRAGKLEEALGLIRSM---PMEPNDVVWRSLL 369
                          +  V H+  M++ L+  G  E A  L+  M    +EP+D+ +  LL
Sbjct: 397  GSIENAIKVFEQIEDGSVDHWNAMINGLAIHGLGELAFDLLMEMERLSIEPDDITFTGLL 456

Query: 368  SAC 360
            +AC
Sbjct: 457  NAC 459



 Score = 63.5 bits (153), Expect = 1e-07
 Identities = 59/236 (25%), Positives = 108/236 (45%), Gaps = 6/236 (2%)
 Frame = -1

Query: 1013 EKDLITWNTMMDGYVKNGLSREALNLFANMRGKDNAAPDNTTLAIVLTALTELGRINDGI 834
            +KD   WN ++  Y      +EAL +F  M   +  + D  + ++VL A + LG I +G+
Sbjct: 81   KKDPFLWNAIIKTYSHGLDPKEALVMFCLMLD-NGVSVDKFSASLVLKACSRLGLIEEGL 139

Query: 833  SIHEYIKRSNLSMDGNLGVALIDMYSKCGRLDDALKVFD-ISANSVDHWNAMISGFACHG 657
             IH  +++     D  L   LI +Y +CG L+ A ++FD +       +N+MI G+    
Sbjct: 140  QIHGLLRKVAFGSDLFLQNCLISLYVRCGYLEFARQLFDKMGIRDSVSYNSMIDGYV--K 197

Query: 656  HGNXXXXXXXXXXXXXLKPDDITFIAVLSACSHAGMVDEGL----MCFERMQKEHGLEPK 489
             GN              + + I++ +VL+  +    +  GL      FE+M +   +   
Sbjct: 198  SGNIESARELFDSMPIRERNLISWNSVLNGYA---QLKSGLQFAWQIFEKMPERDLISWN 254

Query: 488  VQHYGCMVDILSRAGKLEEALGLIRSMPMEPNDVV-WRSLLSACRNHRDLDMGQKL 324
               +GC+     + GK+++A  L   MP    DVV W +++        +D+ ++L
Sbjct: 255  SMLHGCV-----KCGKMDDAQALFDKMP--KRDVVSWANMIDGYAKLGRVDIARRL 303


>ref|XP_002274056.1| PREDICTED: pentatricopeptide repeat-containing protein At2g45350,
            chloroplastic-like [Vitis vinifera]
          Length = 635

 Score =  369 bits (946), Expect = 2e-99
 Identities = 176/356 (49%), Positives = 244/356 (68%), Gaps = 1/356 (0%)
 Frame = -1

Query: 1151 CGRVVDAEDMFEKMPERDVISCTTMINGYMGLGRIDYAKKLFEAMAEKDLITWNTMMDGY 972
            CG++ +A  +F +MP+RDV+S   M++GY  LG ID A+ LF+ M E+D+I+ N MM GY
Sbjct: 266  CGKMENAHHLFNQMPKRDVVSWANMVDGYAKLGEIDIARGLFDEMPERDVISCNAMMAGY 325

Query: 971  VKNGLSREALNLFANMRGKDNAAPDNTTLAIVLTALTELGRINDGISIHEYIKRSNLSMD 792
            V+NG   EALN F +M  +    PDN TL I L+A+ +LG  ++G+++H YI+ +  S+ 
Sbjct: 326  VQNGHLMEALNFFHDMLSRKELFPDNATLLITLSAIAQLGHFDEGVALHCYIEDNGFSLS 385

Query: 791  GNLGVALIDMYSKCGRLDDALKVF-DISANSVDHWNAMISGFACHGHGNXXXXXXXXXXX 615
              LGVALIDMY+KCG +D+AL VF DI   S+DHWNA+I G A HG G            
Sbjct: 386  EKLGVALIDMYAKCGSIDNALSVFEDIDDKSIDHWNAIIGGLAIHGLGEVAFELFMEMEK 445

Query: 614  XXLKPDDITFIAVLSACSHAGMVDEGLMCFERMQKEHGLEPKVQHYGCMVDILSRAGKLE 435
              +KPDDITFI VL+AC+HAG+V EGLMCFE M++ H +EPK+QHYGCMVDIL RAG +E
Sbjct: 446  LFVKPDDITFIGVLNACNHAGLVKEGLMCFELMRRVHKVEPKLQHYGCMVDILGRAGHVE 505

Query: 434  EALGLIRSMPMEPNDVVWRSLLSACRNHRDLDMGQKLVQCLTGERIWXXXXXXXXXXXYA 255
            EA   +  MP+EPNDVVWR+LLSACRNH +  +G+ + + L     +           YA
Sbjct: 506  EAKKFVEKMPIEPNDVVWRTLLSACRNHENFTIGEPVAKHLISVDSYNPSSYVLLSNIYA 565

Query: 254  GVGLWGDAWKLRMLMREKNMKKLPGCSSIEVDGKVYEFVVGDQLQTQTQEVNSSLD 87
            G G+W D +++RM+M+++++KK+PGCS IE++G V+EF V D+   Q +E+ S LD
Sbjct: 566  GFGMWNDVYRIRMMMKQRDLKKIPGCSQIELEGNVHEFFVRDKSHPQVREIYSMLD 621



 Score = 88.2 bits (217), Expect = 6e-15
 Identities = 71/275 (25%), Positives = 137/275 (49%), Gaps = 8/275 (2%)
 Frame = -1

Query: 1151 CGRVVDAEDMFEKMPERDVISCTTMINGYMGLGRIDYAKKLFEA--MAEKDLITWNTMMD 978
            CG +  A  +F++M +RD +S  +MI+GY+  G +  A++LF+   M +K+LI+WN+M+ 
Sbjct: 170  CGCLGIARQLFDRMMKRDSVSFNSMIDGYVKHGMVKSARELFDVMPMEQKNLISWNSMIS 229

Query: 977  GYVKN--GLSREALNLFANMRGKDNAAPDNTTLAIVLTALTELGRINDGISIHEYIKRSN 804
            GY ++  GL R A  LF  M  +D  + ++     ++    + G++ +   +   + + +
Sbjct: 230  GYARSEEGL-RVAWELFEEMPKRDLISWNS-----MIDGCVKCGKMENAHHLFNQMPKRD 283

Query: 803  LSMDGNLGVALIDMYSKCGRLDDALKVFD-ISANSVDHWNAMISGFACHGH-GNXXXXXX 630
            +    N    ++D Y+K G +D A  +FD +    V   NAM++G+  +GH         
Sbjct: 284  VVSWAN----MVDGYAKLGEIDIARGLFDEMPERDVISCNAMMAGYVQNGHLMEALNFFH 339

Query: 629  XXXXXXXLKPDDITFIAVLSACSHAGMVDEG--LMCFERMQKEHGLEPKVQHYGCMVDIL 456
                   L PD+ T +  LSA +  G  DEG  L C+    +++G     +    ++D+ 
Sbjct: 340  DMLSRKELFPDNATLLITLSAIAQLGHFDEGVALHCY---IEDNGFSLSEKLGVALIDMY 396

Query: 455  SRAGKLEEALGLIRSMPMEPNDVVWRSLLSACRNH 351
            ++ G ++ AL +   +  +  D  W +++     H
Sbjct: 397  AKCGSIDNALSVFEDIDDKSID-HWNAIIGGLAIH 430



 Score = 63.2 bits (152), Expect = 2e-07
 Identities = 61/231 (26%), Positives = 102/231 (44%), Gaps = 7/231 (3%)
 Frame = -1

Query: 995 WNTMMDGYVKNGLSREALNLFANMRGKDNAAPDNTTLAIVLTALTELGRINDGISIHEYI 816
           WN ++  +      REA  +F N+  ++    D  + ++VL A + LG I +G+ IH  +
Sbjct: 90  WNAIIKSFSHGEDPREAFVIF-NLMLENGVCVDKFSFSLVLKACSRLGLIKEGMQIHGLL 148

Query: 815 KRSNLSMDGNLGVALIDMYSKCGRLDDALKVFD--ISANSVDHWNAMISGFACHGHGNXX 642
            R  +  D  L   L+ +Y +CG L  A ++FD  +  +SV  +N+MI G+  HG     
Sbjct: 149 GRMEIGSDVFLQNCLMCLYLRCGCLGIARQLFDRMMKRDSVS-FNSMIDGYVKHG----- 202

Query: 641 XXXXXXXXXXXLKPDDITFIAVLSACSHAGMVDEGLM----CFERMQKEHGLEPKVQHYG 474
                      +  +    I+  S  S     +EGL      FE M K   +      + 
Sbjct: 203 MVKSARELFDVMPMEQKNLISWNSMISGYARSEEGLRVAWELFEEMPKRDLIS-----WN 257

Query: 473 CMVDILSRAGKLEEALGLIRSMPMEPNDVV-WRSLLSACRNHRDLDMGQKL 324
            M+D   + GK+E A  L   MP    DVV W +++       ++D+ + L
Sbjct: 258 SMIDGCVKCGKMENAHHLFNQMP--KRDVVSWANMVDGYAKLGEIDIARGL 306


>ref|XP_006445271.1| hypothetical protein CICLE_v10023562mg, partial [Citrus clementina]
            gi|557547533|gb|ESR58511.1| hypothetical protein
            CICLE_v10023562mg, partial [Citrus clementina]
          Length = 658

 Score =  362 bits (929), Expect = 2e-97
 Identities = 171/338 (50%), Positives = 244/338 (72%), Gaps = 1/338 (0%)
 Frame = -1

Query: 1151 CGRVVDAEDMFEKMPERDVISCTTMINGYMGLGRIDYAKKLFEAMAEKDLITWNTMMDGY 972
            CG++ DA+ +F+KMP+RDV+S   MI+GY  LGR+D A++LF+ M ++D++  N MM GY
Sbjct: 320  CGKMDDAQALFDKMPKRDVVSWANMIDGYAKLGRVDIARRLFDEMPKRDVVACNAMMGGY 379

Query: 971  VKNGLSREALNLFANMRGKDNAAPDNTTLAIVLTALTELGRINDGISIHEYIKRSNLSMD 792
            V+NG S +AL +F NM+ +    PD+ +L IVL+A+ +LG I+ G++IH Y+++   S++
Sbjct: 380  VRNGYSMKALEIFDNMQCELYLHPDDASLVIVLSAIAQLGHIDKGVAIHRYLEKDQFSLN 439

Query: 791  GNLGVALIDMYSKCGRLDDALKVFD-ISANSVDHWNAMISGFACHGHGNXXXXXXXXXXX 615
            G  GVALIDMYSKCG +++A+KVF+ I   SVDHWNAMI+G A HG G            
Sbjct: 440  GKHGVALIDMYSKCGSIENAIKVFEQIEDGSVDHWNAMINGLAIHGLGELAFDLLMEMER 499

Query: 614  XXLKPDDITFIAVLSACSHAGMVDEGLMCFERMQKEHGLEPKVQHYGCMVDILSRAGKLE 435
              ++PDDITF  +L+AC+HAG+V EGL+CFE M++ H LEP++QHYGCMVDIL RAG +E
Sbjct: 500  LSIEPDDITFTGLLNACAHAGLVKEGLLCFELMRRIHKLEPELQHYGCMVDILGRAGHIE 559

Query: 434  EALGLIRSMPMEPNDVVWRSLLSACRNHRDLDMGQKLVQCLTGERIWXXXXXXXXXXXYA 255
             A  LI  MPMEPNDV+WR+LLSACRN+ +L++G+ + + L G               +A
Sbjct: 560  AARNLIEDMPMEPNDVIWRTLLSACRNYENLNVGEPVAKHLIGMDSSNSSSYVLLSNMFA 619

Query: 254  GVGLWGDAWKLRMLMREKNMKKLPGCSSIEVDGKVYEF 141
            G+G+W DA ++R +M+E+N+KKLPGCS IE++G V+EF
Sbjct: 620  GLGMWNDARRVRSMMKERNLKKLPGCSWIELEGVVHEF 657



 Score =  103 bits (258), Expect = 1e-19
 Identities = 83/303 (27%), Positives = 153/303 (50%), Gaps = 39/303 (12%)
 Frame = -1

Query: 1151 CGRVVDAEDMFEKMPERDVISCTTMINGYMGLGRIDYAKKLFEAM--AEKDLITWNTMMD 978
            CG +  A  +F+KM  RD +S  +MI+GY+  G I+ A++LF++M   E++LI+WN++++
Sbjct: 224  CGYLEFARQLFDKMGIRDSVSYNSMIDGYVKSGNIESARELFDSMPIRERNLISWNSVLN 283

Query: 977  GY--VKNGLSREALNLFANMRGKDNAAPDNTTLAIVLTALTELGRINDGISIHEYIKRSN 804
            GY  +K+GL + A  +F  M  +D  + ++     +L    + G+++D  ++ + + + +
Sbjct: 284  GYAQLKSGL-QFAWQIFEKMPERDLISWNS-----MLHGCVKCGKMDDAQALFDKMPKRD 337

Query: 803  LSMDGNLGVALIDMYSKCGRLDDALKVFD-ISANSVDHWNAMISGFACHGHG-NXXXXXX 630
            +    N    +ID Y+K GR+D A ++FD +    V   NAM+ G+  +G+         
Sbjct: 338  VVSWAN----MIDGYAKLGRVDIARRLFDEMPKRDVVACNAMMGGYVRNGYSMKALEIFD 393

Query: 629  XXXXXXXLKPDDITFIAVLSACSHAGMVDEGLMCFERMQKE-------HGL--------- 498
                   L PDD + + VLSA +  G +D+G+     ++K+       HG+         
Sbjct: 394  NMQCELYLHPDDASLVIVLSAIAQLGHIDKGVAIHRYLEKDQFSLNGKHGVALIDMYSKC 453

Query: 497  --------------EPKVQHYGCMVDILSRAGKLEEALGLIRSM---PMEPNDVVWRSLL 369
                          +  V H+  M++ L+  G  E A  L+  M    +EP+D+ +  LL
Sbjct: 454  GSIENAIKVFEQIEDGSVDHWNAMINGLAIHGLGELAFDLLMEMERLSIEPDDITFTGLL 513

Query: 368  SAC 360
            +AC
Sbjct: 514  NAC 516



 Score = 63.5 bits (153), Expect = 1e-07
 Identities = 59/236 (25%), Positives = 108/236 (45%), Gaps = 6/236 (2%)
 Frame = -1

Query: 1013 EKDLITWNTMMDGYVKNGLSREALNLFANMRGKDNAAPDNTTLAIVLTALTELGRINDGI 834
            +KD   WN ++  Y      +EAL +F  M   +  + D  + ++VL A + LG I +G+
Sbjct: 138  KKDPFLWNAIIKTYSHGLDPKEALVMFCLMLD-NGVSVDKFSASLVLKACSRLGLIEEGL 196

Query: 833  SIHEYIKRSNLSMDGNLGVALIDMYSKCGRLDDALKVFD-ISANSVDHWNAMISGFACHG 657
             IH  +++     D  L   LI +Y +CG L+ A ++FD +       +N+MI G+    
Sbjct: 197  QIHGLLRKVAFGSDLFLQNCLISLYVRCGYLEFARQLFDKMGIRDSVSYNSMIDGYV--K 254

Query: 656  HGNXXXXXXXXXXXXXLKPDDITFIAVLSACSHAGMVDEGL----MCFERMQKEHGLEPK 489
             GN              + + I++ +VL+  +    +  GL      FE+M +   +   
Sbjct: 255  SGNIESARELFDSMPIRERNLISWNSVLNGYA---QLKSGLQFAWQIFEKMPERDLISWN 311

Query: 488  VQHYGCMVDILSRAGKLEEALGLIRSMPMEPNDVV-WRSLLSACRNHRDLDMGQKL 324
               +GC+     + GK+++A  L   MP    DVV W +++        +D+ ++L
Sbjct: 312  SMLHGCV-----KCGKMDDAQALFDKMP--KRDVVSWANMIDGYAKLGRVDIARRL 360


>ref|XP_002320719.2| pentatricopeptide repeat-containing family protein [Populus
            trichocarpa] gi|550323642|gb|EEE99034.2|
            pentatricopeptide repeat-containing family protein
            [Populus trichocarpa]
          Length = 643

 Score =  361 bits (926), Expect = 3e-97
 Identities = 174/356 (48%), Positives = 236/356 (66%), Gaps = 1/356 (0%)
 Frame = -1

Query: 1151 CGRVVDAEDMFEKMPERDVISCTTMINGYMGLGRIDYAKKLFEAMAEKDLITWNTMMDGY 972
            CGR+ DA+ +F++MP RD++S   MI+GY   GR+D A+ LF+ M E+D++ +N MM GY
Sbjct: 271  CGRMEDAQGLFDRMPNRDIVSWANMIDGYAKNGRVDIARSLFDEMPERDVVAYNAMMGGY 330

Query: 971  VKNGLSREALNLFANMRGKDNAAPDNTTLAIVLTALTELGRINDGISIHEYIKRSNLSMD 792
            V+NG   EAL +F  M+   N   DN TL I L+A+ +LG I+ G++IH +I+    S+D
Sbjct: 331  VQNGYCMEALGIFYGMQSDGNFLLDNATLLIALSAIAQLGHIDKGVAIHRFIEEIGFSLD 390

Query: 791  GNLGVALIDMYSKCGRLDDALKVFD-ISANSVDHWNAMISGFACHGHGNXXXXXXXXXXX 615
            G LGVALIDMYSKCG +++A+ VF+ I   SVDHWNA+I G A HG G            
Sbjct: 391  GRLGVALIDMYSKCGSIENAMMVFENIKEKSVDHWNAIIGGLAIHGLGELAFDFLMEMER 450

Query: 614  XXLKPDDITFIAVLSACSHAGMVDEGLMCFERMQKEHGLEPKVQHYGCMVDILSRAGKLE 435
              ++PDDITFI +L+AC HAG+V EG+MCFE M++ H +EPK+QHYGCMVDIL RAG +E
Sbjct: 451  MRVEPDDITFIGLLNACGHAGLVKEGMMCFELMRRVHKVEPKLQHYGCMVDILGRAGHIE 510

Query: 434  EALGLIRSMPMEPNDVVWRSLLSACRNHRDLDMGQKLVQCLTGERIWXXXXXXXXXXXYA 255
            EA   +  MP EPNDV+WRSLLSAC+ H   ++GQ + + L                 YA
Sbjct: 511  EAKNFVEEMPFEPNDVIWRSLLSACKTHESFNVGQPVAENLMRLDSPSPSSYVLASNMYA 570

Query: 254  GVGLWGDAWKLRMLMREKNMKKLPGCSSIEVDGKVYEFVVGDQLQTQTQEVNSSLD 87
            G+G W D  K+R +M++KN+KK+PGCS IE++G VY F V D+   Q   + S LD
Sbjct: 571  GLGKWNDVRKVRAMMKQKNLKKIPGCSWIELEGHVYAFFVQDKSHPQFSGIYSILD 626



 Score = 95.5 bits (236), Expect = 4e-17
 Identities = 73/273 (26%), Positives = 139/273 (50%), Gaps = 6/273 (2%)
 Frame = -1

Query: 1151 CGRVVDAEDMFEKMPERDVISCTTMINGYMGLGRIDYAKKLFEA--MAEKDLITWNTMMD 978
            CG +V A  +F++MP+RD +S  +MI+GY+  GRID A+ +F+   + E++LI+WN+++ 
Sbjct: 175  CGCLVRASQVFDRMPKRDSVSYNSMIDGYVKGGRIDLARVVFDCIPLEERNLISWNSLIR 234

Query: 977  GYV--KNGLSREALNLFANMRGKDNAAPDNTTLAIVLTALTELGRINDGISIHEYIKRSN 804
            GY   ++G+   A  LFA M  +D  + ++     ++    + GR+ D   + + +   +
Sbjct: 235  GYAQSEDGI-LVAWQLFAKMPERDLISWNS-----MIDGCVKCGRMEDAQGLFDRMPNRD 288

Query: 803  LSMDGNLGVALIDMYSKCGRLDDALKVFD-ISANSVDHWNAMISGFACHGH-GNXXXXXX 630
            +    N    +ID Y+K GR+D A  +FD +    V  +NAM+ G+  +G+         
Sbjct: 289  IVSWAN----MIDGYAKNGRVDIARSLFDEMPERDVVAYNAMMGGYVQNGYCMEALGIFY 344

Query: 629  XXXXXXXLKPDDITFIAVLSACSHAGMVDEGLMCFERMQKEHGLEPKVQHYGCMVDILSR 450
                      D+ T +  LSA +  G +D+G +   R  +E G     +    ++D+ S+
Sbjct: 345  GMQSDGNFLLDNATLLIALSAIAQLGHIDKG-VAIHRFIEEIGFSLDGRLGVALIDMYSK 403

Query: 449  AGKLEEALGLIRSMPMEPNDVVWRSLLSACRNH 351
             G +E A+ +  ++  +  D  W +++     H
Sbjct: 404  CGSIENAMMVFENIKEKSVD-HWNAIIGGLAIH 435



 Score = 65.1 bits (157), Expect = 5e-08
 Identities = 60/239 (25%), Positives = 105/239 (43%), Gaps = 5/239 (2%)
 Frame = -1

Query: 1025 EAMAEKDLITWNTMMDGYVKNGLSREALNLFANMRGKDNAAPDNTTLAIVLTALTELGRI 846
            E   EKD   WN ++  Y      +EA+ L + M  ++ A  D  TL++VL A + +G +
Sbjct: 85   EEEEEKDPFLWNAIIKTYSHGHDPKEAMWLVSLML-ENGAFADKFTLSLVLKACSRVGLV 143

Query: 845  NDGISIHEYIKRSNLSMDGNLGVALIDMYSKCGRLDDALKVFD-ISANSVDHWNAMISGF 669
             +G+ IH  +K+     D  L   LI  Y KCG L  A +VFD +       +N+MI G+
Sbjct: 144  KEGMQIHGLLKKLEFGSDLFLQNCLISFYVKCGCLVRASQVFDRMPKRDSVSYNSMIDGY 203

Query: 668  ACHGHGNXXXXXXXXXXXXXLKPDDITFIAVLSACSHAGMVDEGLM----CFERMQKEHG 501
               G  +                ++   I+  S        ++G++     F +M     
Sbjct: 204  VKGGRIDLARVVFDCIPL-----EERNLISWNSLIRGYAQSEDGILVAWQLFAKMP---- 254

Query: 500  LEPKVQHYGCMVDILSRAGKLEEALGLIRSMPMEPNDVVWRSLLSACRNHRDLDMGQKL 324
             E  +  +  M+D   + G++E+A GL   MP   + V W +++     +  +D+ + L
Sbjct: 255  -ERDLISWNSMIDGCVKCGRMEDAQGLFDRMP-NRDIVSWANMIDGYAKNGRVDIARSL 311


>gb|EOX96228.1| Pentatricopeptide repeat (PPR) superfamily protein, putative
            [Theobroma cacao]
          Length = 637

 Score =  359 bits (922), Expect = 1e-96
 Identities = 173/355 (48%), Positives = 242/355 (68%), Gaps = 1/355 (0%)
 Frame = -1

Query: 1151 CGRVVDAEDMFEKMPERDVISCTTMINGYMGLGRIDYAKKLFEAMAEKDLITWNTMMDGY 972
            CG + DA+ +F KMP+RDV+S   MINGY  +G+ID A++LF+ M E+D++  N MM GY
Sbjct: 266  CGNMEDAQALFVKMPKRDVVSWANMINGYAKVGKIDLARRLFDEMPERDVVVCNAMMGGY 325

Query: 971  VKNGLSREALNLFANMRGKDNAAPDNTTLAIVLTALTELGRINDGISIHEYIKRSNLSMD 792
            V+NG   EAL +F +++  DN  PDN TL IVL+A+ +LGRI+ G++IH+Y++ +  S+ 
Sbjct: 326  VQNGYCSEALEIFYHLQRYDNLQPDNATLLIVLSAIAQLGRIDKGLAIHQYLEENKFSLS 385

Query: 791  GNLGVALIDMYSKCGRLDDALKVFD-ISANSVDHWNAMISGFACHGHGNXXXXXXXXXXX 615
            G LGVALIDMYSKCG + + + VF+ I   SVDHWNAMI G A HG G            
Sbjct: 386  GRLGVALIDMYSKCGSVKNGMLVFESIEDRSVDHWNAMIGGLAIHGLGELAFSLLIEMER 445

Query: 614  XXLKPDDITFIAVLSACSHAGMVDEGLMCFERMQKEHGLEPKVQHYGCMVDILSRAGKLE 435
              ++PDDIT+I VL+AC HAG+V EGL+CF+ M++ H + PK++HYGC+VDIL RAG++ 
Sbjct: 446  LSVEPDDITYIGVLNACGHAGLVKEGLICFDIMRRVHKMVPKLKHYGCIVDILGRAGQIA 505

Query: 434  EALGLIRSMPMEPNDVVWRSLLSACRNHRDLDMGQKLVQCLTGERIWXXXXXXXXXXXYA 255
            EA   I  MP+E NDV+WRSLLSAC+NH ++D+G+ + + L                 YA
Sbjct: 506  EARKFIEEMPIEANDVIWRSLLSACKNHENIDVGEPVAEHLISLDSCNSSSYILLSNMYA 565

Query: 254  GVGLWGDAWKLRMLMREKNMKKLPGCSSIEVDGKVYEFVVGDQLQTQTQEVNSSL 90
            G+G+W     +RM M+E+N+KK+PGCS IE++G V+EF V D+   Q  E+ S L
Sbjct: 566  GLGMWSAVSNVRMRMKERNLKKIPGCSWIELEGTVHEFFVQDKSHPQVMEIYSLL 620



 Score = 95.1 bits (235), Expect = 5e-17
 Identities = 80/302 (26%), Positives = 144/302 (47%), Gaps = 38/302 (12%)
 Frame = -1

Query: 1151 CGRVVDAEDMFEKMPERDVISCTTMINGYMGLGRIDYAKKLFE--AMAEKDLITWNTMMD 978
            CG V  A  +F++M  RD +S  +MI+GY+  G I  A++LFE   M +K+LITWN+M+ 
Sbjct: 170  CGFVGYARQLFDRMCRRDSVSYNSMIDGYIKTGMIHLARELFEFMPMEDKNLITWNSMIS 229

Query: 977  GYVKNGLSR-EALNLFANMRGKDNAAPDNTTLAIVLTALTELGRINDGISIHEYIKRSNL 801
            GY +       AL LF  M  +D  + ++     ++    + G + D  ++   + + ++
Sbjct: 230  GYAQLEYGMVMALKLFEEMPDRDLISWNS-----MINGFVKCGNMEDAQALFVKMPKRDV 284

Query: 800  SMDGNLGVALIDMYSKCGRLDDALKVFD-ISANSVDHWNAMISGFACHGH-GNXXXXXXX 627
                N    +I+ Y+K G++D A ++FD +    V   NAM+ G+  +G+          
Sbjct: 285  VSWAN----MINGYAKVGKIDLARRLFDEMPERDVVVCNAMMGGYVQNGYCSEALEIFYH 340

Query: 626  XXXXXXLKPDDITFIAVLSACSHAGMVDEGLMCFERMQK--------------------- 510
                  L+PD+ T + VLSA +  G +D+GL   + +++                     
Sbjct: 341  LQRYDNLQPDNATLLIVLSAIAQLGRIDKGLAIHQYLEENKFSLSGRLGVALIDMYSKCG 400

Query: 509  --EHGL-------EPKVQHYGCMVDILSRAGKLEEALGLIRSM---PMEPNDVVWRSLLS 366
              ++G+       +  V H+  M+  L+  G  E A  L+  M    +EP+D+ +  +L+
Sbjct: 401  SVKNGMLVFESIEDRSVDHWNAMIGGLAIHGLGELAFSLLIEMERLSVEPDDITYIGVLN 460

Query: 365  AC 360
            AC
Sbjct: 461  AC 462


>gb|EXB76219.1| hypothetical protein L484_025573 [Morus notabilis]
          Length = 626

 Score =  355 bits (912), Expect = 1e-95
 Identities = 173/355 (48%), Positives = 241/355 (67%), Gaps = 1/355 (0%)
 Frame = -1

Query: 1148 GRVVDAEDMFEKMPERDVISCTTMINGYMGLGRIDYAKKLFEAMAEKDLITWNTMMDGYV 969
            G++ DA  +F +MP+RD++S   +I+GY  LGRI  A+ LF  M ++D++  N MM GYV
Sbjct: 259  GKIEDARSLFNRMPKRDIVSWANLIDGYSKLGRIHVARSLFNEMPDRDVVACNAMMAGYV 318

Query: 968  KNGLSREALNLFANMRGKDNAAPDNTTLAIVLTALTELGRINDGISIHEYIKRSNLSMDG 789
             NG   E L +F +M+  D  +PD TTL I L+A+ +LG I  G+++H YI+ + + +  
Sbjct: 319  GNGYFMEGLEIFRHMQNGD-VSPDVTTLLIALSAVAQLGHIEKGVALHFYIQENGVPLGR 377

Query: 788  NLGVALIDMYSKCGRLDDALKVFD-ISANSVDHWNAMISGFACHGHGNXXXXXXXXXXXX 612
             LGVALIDMY+KCG +D A+ VF+ +   SVDHWNAMI G+A HG G             
Sbjct: 378  KLGVALIDMYAKCGSIDKAIAVFEGMEERSVDHWNAMIGGYAIHGLGELAFCLLMEMERL 437

Query: 611  XLKPDDITFIAVLSACSHAGMVDEGLMCFERMQKEHGLEPKVQHYGCMVDILSRAGKLEE 432
             +KPDDITFI VL+AC HAG+V EGLMCFE M++ H +EPK+QHYGC+VD+L RAG +EE
Sbjct: 438  SVKPDDITFIGVLNACGHAGLVKEGLMCFELMRRVHKVEPKLQHYGCIVDMLGRAGHVEE 497

Query: 431  ALGLIRSMPMEPNDVVWRSLLSACRNHRDLDMGQKLVQCLTGERIWXXXXXXXXXXXYAG 252
            A   I  MP+EPNDVVWR+LLSAC++H+  D+G+ + + L  +              YAG
Sbjct: 498  ARRFIEEMPIEPNDVVWRTLLSACKSHKKFDIGEPIAKNLIQKDSCNPSFYVLLSNMYAG 557

Query: 251  VGLWGDAWKLRMLMREKNMKKLPGCSSIEVDGKVYEFVVGDQLQTQTQEVNSSLD 87
            +G+WGD +K+RM+MRE+N+ KLPGCS IE++G V+EF+V D+   Q  E+ S L+
Sbjct: 558  LGMWGDVFKVRMMMRERNVTKLPGCSRIELEGVVHEFMVQDKSHPQITEIYSMLN 612



 Score = 58.5 bits (140), Expect = 5e-06
 Identities = 50/237 (21%), Positives = 93/237 (39%), Gaps = 34/237 (14%)
 Frame = -1

Query: 1013 EKDLITWNTMMDGYVKNGLSREALNLFANMRGKDNAAPDNTTLAIVLTALTELGRINDGI 834
            E D   WN ++  Y      ++A  +F  M  ++    D  + +++L A   LG + +G+
Sbjct: 78   EDDPFLWNAVIKSYSHGCDPKQAFVMFCMML-ENGVRVDKFSFSLILKACGRLGLVKEGL 136

Query: 833  SIHEYIKRSNLSMDGNLGVALIDMYSKCGRLDDALKVFD-------ISANSVDH------ 693
             IH  +K+  +  D  L   L+  Y +CG ++ A +VFD       +S NS+        
Sbjct: 137  QIHGLLKKMEIGSDLYLQNGLVSWYLRCGCVEFARQVFDGMQKRDSVSYNSMIDGYVKCG 196

Query: 692  ---------------------WNAMISGFACHGHGNXXXXXXXXXXXXXLKPDDITFIAV 576
                                 WN+MISG+A                    + D +++  +
Sbjct: 197  MIDLARELFDCMPLEEKNLVTWNSMISGYA-----QSDLEFAWELFETMPERDSVSWNTM 251

Query: 575  LSACSHAGMVDEGLMCFERMQKEHGLEPKVQHYGCMVDILSRAGKLEEALGLIRSMP 405
            ++     G +++    F RM K       +  +  ++D  S+ G++  A  L   MP
Sbjct: 252  INGYVKRGKIEDARSLFNRMPKR-----DIVSWANLIDGYSKLGRIHVARSLFNEMP 303


>ref|XP_004514160.1| PREDICTED: pentatricopeptide repeat-containing protein At2g45350,
            chloroplastic-like [Cicer arietinum]
          Length = 630

 Score =  347 bits (891), Expect = 4e-93
 Identities = 174/354 (49%), Positives = 240/354 (67%), Gaps = 1/354 (0%)
 Frame = -1

Query: 1148 GRVVDAEDMFEKMPERDVISCTTMINGYMGLGRIDYAKKLFEAMAEKDLITWNTMMDGYV 969
            G + DA+  F+KMP+RD++S  TMI+GY  LG I  A  LF+ M  +D++  N+MM GYV
Sbjct: 274  GNMEDAQAFFDKMPKRDLVSWVTMIDGYAKLGDIVAATSLFDGMPRRDVVCCNSMMAGYV 333

Query: 968  KNGLSREALNLFANMRGKDNAAPDNTTLAIVLTALTELGRINDGISIHEYIKRSNLSMDG 789
            +NG   EAL LF +MR   +  PDNTTL IVLTA+ +LGR+ DG++IH+Y+  +  S+  
Sbjct: 334  QNGYCIEALKLFHDMRRATDMLPDNTTLLIVLTAVAQLGRVEDGVAIHQYLIDNGYSLSD 393

Query: 788  NLGVALIDMYSKCGRLDDALKVFD-ISANSVDHWNAMISGFACHGHGNXXXXXXXXXXXX 612
            NLGVA+IDMYSKCG +++A+ VF+ I    VDHWNA+I G A HG               
Sbjct: 394  NLGVAVIDMYSKCGSIENAISVFENIDKKCVDHWNALIGGLAVHGMSEMALDFLMEMFRR 453

Query: 611  XLKPDDITFIAVLSACSHAGMVDEGLMCFERMQKEHGLEPKVQHYGCMVDILSRAGKLEE 432
             + PDDITFIAVLSAC HAGM+ EGL+CFE MQK + L+PK+QHYGCMVD+LSRAG +EE
Sbjct: 454  CILPDDITFIAVLSACRHAGMLKEGLICFELMQKVYKLKPKLQHYGCMVDMLSRAGHVEE 513

Query: 431  ALGLIRSMPMEPNDVVWRSLLSACRNHRDLDMGQKLVQCLTGERIWXXXXXXXXXXXYAG 252
            A  LI +MP+EPNDV+W++LLSAC+ H +L +G+ +   L   +             YA 
Sbjct: 514  ATKLIENMPIEPNDVIWKTLLSACQIHENLSIGKPIAHQLIQLKSCNASSYVLLSNFYAS 573

Query: 251  VGLWGDAWKLRMLMREKNMKKLPGCSSIEVDGKVYEFVVGDQLQTQTQEVNSSL 90
            +G+W D  ++R+ M+E++++K+PGCS IE+ G V++F V D+   Q  E+ S L
Sbjct: 574  LGMWDDVRRVRLEMKERHLEKIPGCSWIELGGIVHKFFVQDRTHPQATEIYSLL 627



 Score = 87.8 bits (216), Expect = 7e-15
 Identities = 72/276 (26%), Positives = 135/276 (48%), Gaps = 9/276 (3%)
 Frame = -1

Query: 1151 CGRVVDAEDMFEKMPERDVISCTTMINGYMGLGRIDYAKKLFEAM--AEKDLITWNTMMD 978
            CG V  A+ +F+++ ERD +S  +MI+GY+  G I  A +LF  M   EK+LITWN+M+ 
Sbjct: 173  CGCVDFAKQVFDRISERDSVSYNSMIDGYVKCGLIGRACELFHGMEIKEKNLITWNSMIG 232

Query: 977  GYVKNGLS-----REALNLFANMRGKDNAAPDNTTLAIVLTALTELGRINDGISIHEYIK 813
            GY++ G       R A +LF  M  +D  + +      ++    + G + D  +  + + 
Sbjct: 233  GYLRYGEDDDDGLRFAWSLFVKMPERDLVSWNT-----MIDGCVKRGNMEDAQAFFDKMP 287

Query: 812  RSNLSMDGNLGVALIDMYSKCGRLDDALKVFD-ISANSVDHWNAMISGFACHGHG-NXXX 639
            + +L       V +ID Y+K G +  A  +FD +    V   N+M++G+  +G+      
Sbjct: 288  KRDLVS----WVTMIDGYAKLGDIVAATSLFDGMPRRDVVCCNSMMAGYVQNGYCIEALK 343

Query: 638  XXXXXXXXXXLKPDDITFIAVLSACSHAGMVDEGLMCFERMQKEHGLEPKVQHYGCMVDI 459
                      + PD+ T + VL+A +  G V++G+   + +  ++G          ++D+
Sbjct: 344  LFHDMRRATDMLPDNTTLLIVLTAVAQLGRVEDGVAIHQYL-IDNGYSLSDNLGVAVIDM 402

Query: 458  LSRAGKLEEALGLIRSMPMEPNDVVWRSLLSACRNH 351
             S+ G +E A+ +  ++  +  D  W +L+     H
Sbjct: 403  YSKCGSIENAISVFENIDKKCVD-HWNALIGGLAVH 437


>gb|ESW27348.1| hypothetical protein PHAVU_003G194000g [Phaseolus vulgaris]
          Length = 618

 Score =  347 bits (890), Expect = 5e-93
 Identities = 173/354 (48%), Positives = 237/354 (66%), Gaps = 1/354 (0%)
 Frame = -1

Query: 1148 GRVVDAEDMFEKMPERDVISCTTMINGYMGLGRIDYAKKLFEAMAEKDLITWNTMMDGYV 969
            GRV DA  +F++MPERD++S  TMI+GY   G +  A++LF+ M  +D+I+ N+MM GYV
Sbjct: 262  GRVEDARRLFDEMPERDLVSWVTMIDGYAKSGDVLAARRLFDEMPRRDVISCNSMMAGYV 321

Query: 968  KNGLSREALNLFANMRGKDNAAPDNTTLAIVLTALTELGRINDGISIHEYIKRSNLSMDG 789
            +NG   EAL +F +M+   N  PD+TTL IVLTA  +LG + DG+ IH Y+ +   S++G
Sbjct: 322  QNGYCVEALKIFHDMKRAGNVFPDDTTLLIVLTAFAQLGHVEDGVVIHHYLMKKGYSLNG 381

Query: 788  NLGVALIDMYSKCGRLDDALKVFD-ISANSVDHWNAMISGFACHGHGNXXXXXXXXXXXX 612
             LGVALIDMYSKCG ++DA+ VF+ +    VDHWNA+I G A HG G             
Sbjct: 382  KLGVALIDMYSKCGSIEDAISVFENVEQKCVDHWNALIGGLAIHGMGEMAFDFLMEMGRV 441

Query: 611  XLKPDDITFIAVLSACSHAGMVDEGLMCFERMQKEHGLEPKVQHYGCMVDILSRAGKLEE 432
             + PDDITFI VLSAC HAG++ EG++CFE MQK + LEPKVQHYGCMVD+LSRAG +EE
Sbjct: 442  SVIPDDITFIGVLSACRHAGLLKEGMICFEIMQKVYKLEPKVQHYGCMVDMLSRAGHVEE 501

Query: 431  ALGLIRSMPMEPNDVVWRSLLSACRNHRDLDMGQKLVQCLTGERIWXXXXXXXXXXXYAG 252
            A  LI  MP+EPNDV+W++LLS+C+ + +  MG+ + Q LT                YA 
Sbjct: 502  ARKLIEEMPVEPNDVIWKALLSSCQIYENFSMGKPIAQHLTQLYSCSPGSYVLLSNIYAS 561

Query: 251  VGLWGDAWKLRMLMREKNMKKLPGCSSIEVDGKVYEFVVGDQLQTQTQEVNSSL 90
            +G+W +  ++R  M+E+++KK+PGCS IE+ G V+ F V D+   Q  E+ S L
Sbjct: 562  LGMWDNVKRVRTEMKERHLKKIPGCSWIELGGTVHHFSVKDRTHPQVTEIYSLL 615



 Score =  107 bits (267), Expect = 9e-21
 Identities = 77/272 (28%), Positives = 143/272 (52%), Gaps = 5/272 (1%)
 Frame = -1

Query: 1151 CGRVVDAEDMFEKMPERDVISCTTMINGYMGLGRIDYAKKLFEAMAEKDLITWNTMMDGY 972
            CG V  A  +F++MP+RD++S  +MI GY+  G+++ A+ LF+ M E++LITWN+M+ GY
Sbjct: 167  CGCVELARQVFDRMPDRDIVSYNSMIGGYVKFGKVEQARDLFDGMEERNLITWNSMIGGY 226

Query: 971  V--KNGLSREALNLFANMRGKDNAAPDNTTLAIVLTALTELGRINDGISIHEYIKRSNLS 798
            V  + GL   A +LF  M  +D  + +      ++    + GR+ D   + + +   +L 
Sbjct: 227  VMWEEGLG-FAWSLFVKMPERDLVSWNT-----MIGGCVKHGRVEDARRLFDEMPERDLV 280

Query: 797  MDGNLGVALIDMYSKCGRLDDALKVFD-ISANSVDHWNAMISGFACHGH-GNXXXXXXXX 624
                  V +ID Y+K G +  A ++FD +    V   N+M++G+  +G+           
Sbjct: 281  S----WVTMIDGYAKSGDVLAARRLFDEMPRRDVISCNSMMAGYVQNGYCVEALKIFHDM 336

Query: 623  XXXXXLKPDDITFIAVLSACSHAGMVDEGLMCFE-RMQKEHGLEPKVQHYGCMVDILSRA 447
                 + PDD T + VL+A +  G V++G++     M+K + L  K+     ++D+ S+ 
Sbjct: 337  KRAGNVFPDDTTLLIVLTAFAQLGHVEDGVVIHHYLMKKGYSLNGKLG--VALIDMYSKC 394

Query: 446  GKLEEALGLIRSMPMEPNDVVWRSLLSACRNH 351
            G +E+A+ +  ++  +  D  W +L+     H
Sbjct: 395  GSIEDAISVFENVEQKCVD-HWNALIGGLAIH 425


>ref|XP_004133915.1| PREDICTED: pentatricopeptide repeat-containing protein At2g45350,
            chloroplastic-like [Cucumis sativus]
            gi|449480068|ref|XP_004155790.1| PREDICTED:
            pentatricopeptide repeat-containing protein At2g45350,
            chloroplastic-like [Cucumis sativus]
          Length = 638

 Score =  343 bits (880), Expect = 7e-92
 Identities = 167/356 (46%), Positives = 237/356 (66%), Gaps = 1/356 (0%)
 Frame = -1

Query: 1151 CGRVVDAEDMFEKMPERDVISCTTMINGYMGLGRIDYAKKLFEAMAEKDLITWNTMMDGY 972
            CGR+  A  +F +MP+RDVIS + MI+GY  LG I  A+ LF+ M +KD++ +NT+M GY
Sbjct: 269  CGRIEFAHSLFNRMPKRDVISWSNMIDGYAKLGDIKVARTLFDEMPDKDVVAFNTIMAGY 328

Query: 971  VKNGLSREALNLFANMRGKDNAAPDNTTLAIVLTALTELGRINDGISIHEYIKRSNLSMD 792
             +NG   EAL +F  M+ + N +PD TTL + L+A+++LG +    S+H Y   + +S+ 
Sbjct: 329  AQNGYYTEALEIFHEMQRQSNLSPDETTLVVALSAISQLGHVEKAASMHNYFLENGISVT 388

Query: 791  GNLGVALIDMYSKCGRLDDALKVFD-ISANSVDHWNAMISGFACHGHGNXXXXXXXXXXX 615
            G + VALIDMYSKCG +++A+ +FD +    +DHWNAMISG A +G G            
Sbjct: 389  GKVAVALIDMYSKCGSIENAILIFDGVDQKGIDHWNAMISGMARNGLGKLAFGMLLEMHR 448

Query: 614  XXLKPDDITFIAVLSACSHAGMVDEGLMCFERMQKEHGLEPKVQHYGCMVDILSRAGKLE 435
              +KPD ITFI VL+AC+HAG+V EGL+CFE M+K H LEPK+QHYGCMVDIL +AG +E
Sbjct: 449  LSVKPDGITFIGVLNACAHAGLVKEGLICFELMRKVHKLEPKLQHYGCMVDILGKAGLVE 508

Query: 434  EALGLIRSMPMEPNDVVWRSLLSACRNHRDLDMGQKLVQCLTGERIWXXXXXXXXXXXYA 255
             AL  I  MP+EPND++WR+LLSAC+NH +  +G+ + + L                 YA
Sbjct: 509  GALKFIEEMPIEPNDIIWRTLLSACQNHENFTIGELIAKHLMTMDSCNSSSYVLLSNIYA 568

Query: 254  GVGLWGDAWKLRMLMREKNMKKLPGCSSIEVDGKVYEFVVGDQLQTQTQEVNSSLD 87
             +GLW  A K+RM+M+++N+ K+PGCS IE++G V+EF+V D+      E+ S LD
Sbjct: 569  RLGLWSAASKVRMMMKKQNLTKVPGCSWIELEGVVHEFLVRDKSHPYVSEIYSVLD 624



 Score = 70.1 bits (170), Expect = 2e-09
 Identities = 55/221 (24%), Positives = 99/221 (44%), Gaps = 1/221 (0%)
 Frame = -1

Query: 1079 MINGYMGLGRIDYAKKLFEAMAEKDLITWNTMMDGYVKNGLSREALNLFANMRGKDNAAP 900
            +I  Y+  G I++A+++F+ M  +D +++N+M+DGYVK+G    A  LF +M  +D    
Sbjct: 166  LIAMYLRCGDIEFARQVFDRMPIQDSVSYNSMIDGYVKSGTIDLARELFDSMPLEDK--- 222

Query: 899  DNTTLAIVLTALTELGRINDGISIHEYIKRSNLSMDGNLGVALIDMYSKCGRLDDALKVF 720
                L    + L    +  DGI +   +       D      +I  ++KCGR++ A  +F
Sbjct: 223  ---NLISWNSMLGGFAQTKDGIGLALELFEKMPERDLVSWNTIIGGFAKCGRIEFAHSLF 279

Query: 719  D-ISANSVDHWNAMISGFACHGHGNXXXXXXXXXXXXXLKPDDITFIAVLSACSHAGMVD 543
            + +    V  W+ MI G+A  G                   D + F  +++  +  G   
Sbjct: 280  NRMPKRDVISWSNMIDGYAKLG----DIKVARTLFDEMPDKDVVAFNTIMAGYAQNGYYT 335

Query: 542  EGLMCFERMQKEHGLEPKVQHYGCMVDILSRAGKLEEALGL 420
            E L  F  MQ++  L P        +  +S+ G +E+A  +
Sbjct: 336  EALEIFHEMQRQSNLSPDETTLVVALSAISQLGHVEKAASM 376


>gb|AHB18411.1| pentatricopeptide repeat-containing protein [Gossypium hirsutum]
          Length = 637

 Score =  343 bits (879), Expect = 1e-91
 Identities = 165/356 (46%), Positives = 237/356 (66%), Gaps = 1/356 (0%)
 Frame = -1

Query: 1151 CGRVVDAEDMFEKMPERDVISCTTMINGYMGLGRIDYAKKLFEAMAEKDLITWNTMMDGY 972
            CG + DA+ +F+KMP RDV+S   MINGY  +G+ID A+ LF  M+E+D++  N MM G 
Sbjct: 266  CGNMEDAQILFDKMPRRDVVSWANMINGYAKVGKIDLARSLFNEMSERDIVVCNAMMAGC 325

Query: 971  VKNGLSREALNLFANMRGKDNAAPDNTTLAIVLTALTELGRINDGISIHEYIKRSNLSMD 792
            V+NG   EAL +F ++    +  PD+ TL I L+A+ +LG ++ G+++H Y+K+   S+ 
Sbjct: 326  VQNGYCGEALEIFYHLPRNCSLQPDSATLLIALSAIAQLGHVDRGLALHHYLKQKKFSLG 385

Query: 791  GNLGVALIDMYSKCGRLDDALKVFD-ISANSVDHWNAMISGFACHGHGNXXXXXXXXXXX 615
            G LGVALIDMYSKCG + +A+ VF+ I   +VDHWNAMI G A HG G            
Sbjct: 386  GRLGVALIDMYSKCGSIKNAVLVFEGIKYKTVDHWNAMIGGLAIHGMGELAFKLLMDMEK 445

Query: 614  XXLKPDDITFIAVLSACSHAGMVDEGLMCFERMQKEHGLEPKVQHYGCMVDILSRAGKLE 435
              ++PDDIT+I VL+AC HAG+V EGL+CF+ M++ H + PK+QHYGC+VDIL RAG+++
Sbjct: 446  LCVEPDDITYIGVLNACGHAGLVKEGLICFDIMRRVHKMVPKLQHYGCVVDILGRAGQID 505

Query: 434  EALGLIRSMPMEPNDVVWRSLLSACRNHRDLDMGQKLVQCLTGERIWXXXXXXXXXXXYA 255
             A   I  MP+E NDV+WRSLLSAC+NH ++++G+   + L                 YA
Sbjct: 506  VARKFIEEMPIEANDVIWRSLLSACKNHENIEVGEPAGKHLITLDSCNSSSYVLLSNMYA 565

Query: 254  GVGLWGDAWKLRMLMREKNMKKLPGCSSIEVDGKVYEFVVGDQLQTQTQEVNSSLD 87
            G+G+W     +R++M+E+N+KK+PGCS IE++G V+EF V D+   Q  E+ S LD
Sbjct: 566  GLGMWNAVSSVRLMMKERNLKKIPGCSRIELEGTVHEFFVQDKSHPQVMEIYSLLD 621



 Score = 99.0 bits (245), Expect = 3e-18
 Identities = 84/303 (27%), Positives = 145/303 (47%), Gaps = 39/303 (12%)
 Frame = -1

Query: 1151 CGRVVDAEDMFEKMPERDVISCTTMINGYMGLGRIDYAKKLFEAM--AEKDLITWNTMMD 978
            CG +  A  +F++M  RD +S  +MI+GY+  G ID AK+LF+ M    K+LITWN+M+ 
Sbjct: 170  CGFIGYARQLFDRMSMRDSVSYNSMIDGYIKRGMIDLAKELFDVMPLENKNLITWNSMIS 229

Query: 977  GY--VKNGLSREALNLFANMRGKDNAAPDNTTLAIVLTALTELGRINDGISIHEYIKRSN 804
            GY  +K+G+   AL LF  M  +D  + ++     ++    + G + D   + + + R +
Sbjct: 230  GYTQLKDGMGL-ALGLFEKMPDRDLISWNS-----MINGFVKCGNMEDAQILFDKMPRRD 283

Query: 803  LSMDGNLGVALIDMYSKCGRLDDALKVF-DISANSVDHWNAMISGFACHGH-GNXXXXXX 630
            +    N    +I+ Y+K G++D A  +F ++S   +   NAM++G   +G+ G       
Sbjct: 284  VVSWAN----MINGYAKVGKIDLARSLFNEMSERDIVVCNAMMAGCVQNGYCGEALEIFY 339

Query: 629  XXXXXXXLKPDDITFIAVLSACSHAGMVDEGLMCFERMQKE------------------- 507
                   L+PD  T +  LSA +  G VD GL     ++++                   
Sbjct: 340  HLPRNCSLQPDSATLLIALSAIAQLGHVDRGLALHHYLKQKKFSLGGRLGVALIDMYSKC 399

Query: 506  ----------HGLEPK-VQHYGCMVDILSRAGKLEEALGLIRSMP---MEPNDVVWRSLL 369
                       G++ K V H+  M+  L+  G  E A  L+  M    +EP+D+ +  +L
Sbjct: 400  GSIKNAVLVFEGIKYKTVDHWNAMIGGLAIHGMGELAFKLLMDMEKLCVEPDDITYIGVL 459

Query: 368  SAC 360
            +AC
Sbjct: 460  NAC 462



 Score = 58.9 bits (141), Expect = 4e-06
 Identities = 60/254 (23%), Positives = 114/254 (44%), Gaps = 12/254 (4%)
 Frame = -1

Query: 1049 IDYAKKLF-------EAMAEKDLITWNTMMDGYVKNGLSREALNLFANMRGKDNAAP-DN 894
            +D+A+ +F           ++D   WN ++  Y     ++EA  +   M   +N  P D 
Sbjct: 65   VDFARYVFFTYLAFRSPKQDEDPFLWNAVIKSYSHGREAQEAFIILCLML--ENGVPFDK 122

Query: 893  TTLAIVLTALTELGRINDGISIHEYIKRSNLSMDGNLGVALIDMYSKCGRLDDALKVFD- 717
             +L++VL A ++LG + +G+ +H  +++ N   D  L   LI  Y +CG +  A ++FD 
Sbjct: 123  FSLSLVLKACSQLGLLKEGMQVHGLLRKLNFGSDLFLQNCLISYYLRCGFIGYARQLFDR 182

Query: 716  ISANSVDHWNAMISGFACHGHGNXXXXXXXXXXXXXLKPDDITFIAVLSACSHA--GMVD 543
            +S      +N+MI G+     G                 + IT+ +++S  +    GM  
Sbjct: 183  MSMRDSVSYNSMIDGYI--KRGMIDLAKELFDVMPLENKNLITWNSMISGYTQLKDGM-G 239

Query: 542  EGLMCFERMQKEHGLEPKVQHYGCMVDILSRAGKLEEALGLIRSMPMEPNDVV-WRSLLS 366
              L  FE+M      +  +  +  M++   + G +E+A  L   MP    DVV W ++++
Sbjct: 240  LALGLFEKMP-----DRDLISWNSMINGFVKCGNMEDAQILFDKMPR--RDVVSWANMIN 292

Query: 365  ACRNHRDLDMGQKL 324
                   +D+ + L
Sbjct: 293  GYAKVGKIDLARSL 306


>gb|AEN99829.1| chlororespiratory reduction 4, partial [Barbarea verna]
          Length = 588

 Score =  340 bits (872), Expect = 6e-91
 Identities = 161/339 (47%), Positives = 233/339 (68%), Gaps = 1/339 (0%)
 Frame = -1

Query: 1148 GRVVDAEDMFEKMPERDVISCTTMINGYMGLGRIDYAKKLFEAMAEKDLITWNTMMDGYV 969
            GR+ DA+D+F  MP RDV++  TMI+GY  LG +  AK LF+ M  +D++ +N+MM GYV
Sbjct: 241  GRMEDAKDLFYVMPRRDVVTWATMIDGYAKLGFVHKAKTLFDQMPHRDVVAYNSMMAGYV 300

Query: 968  KNGLSREALNLFANMRGKDNAAPDNTTLAIVLTALTELGRINDGISIHEYIKRSNLSMDG 789
            +N  + EAL +F++M  + + +PD TTL IVL+A+ +LGR++  + +H YI      + G
Sbjct: 301  QNKYNMEALEIFSDMEKESHLSPDETTLVIVLSAIAQLGRLSKAMDMHLYIVEKQFFLGG 360

Query: 788  NLGVALIDMYSKCGRLDDALKVFD-ISANSVDHWNAMISGFACHGHGNXXXXXXXXXXXX 612
             LGVALIDMYSKCG +  A+ VF+ I   S+DHWNAMI G A HG G             
Sbjct: 361  KLGVALIDMYSKCGSIQQAMLVFERIENKSIDHWNAMIGGLAIHGLGESAFDMLLEIERR 420

Query: 611  XLKPDDITFIAVLSACSHAGMVDEGLMCFERMQKEHGLEPKVQHYGCMVDILSRAGKLEE 432
             +KPDDITF+ +L+ACSH+G+V EGL+CFE M+++H +EP++QHYGCMVDILSR+G +E 
Sbjct: 421  SIKPDDITFVGILNACSHSGLVKEGLLCFELMRRKHKIEPRLQHYGCMVDILSRSGSIEL 480

Query: 431  ALGLIRSMPMEPNDVVWRSLLSACRNHRDLDMGQKLVQCLTGERIWXXXXXXXXXXXYAG 252
            A  LI  MPMEPNDV+WR+ L+AC +H++ + G+ + + L  +  +           YA 
Sbjct: 481  AKNLIEEMPMEPNDVIWRTFLTACSHHKEFETGEVVAKHLILQAGYNPSSYVLLSNMYAS 540

Query: 251  VGLWGDAWKLRMLMREKNMKKLPGCSSIEVDGKVYEFVV 135
             G+W DA ++R +M+E+ ++K+PGCS IE+DG+V+EF V
Sbjct: 541  FGMWKDARRVRTMMKERELQKVPGCSWIELDGRVHEFFV 579



 Score = 67.0 bits (162), Expect = 1e-08
 Identities = 55/228 (24%), Positives = 103/228 (45%), Gaps = 1/228 (0%)
 Frame = -1

Query: 1100 DVISCTTMINGYMGLGRIDYAKKLFEAMAEKDLITWNTMMDGYVKNGLSREALNLFANMR 921
            D+     +I  Y+  G + +A+++F+ M ++D +++N+M+DGYVK GL   A  LF    
Sbjct: 130  DLFLQNCLIGLYLKCGCLGFARQIFDRMPQRDSVSYNSMIDGYVKCGLIGSARELF---- 185

Query: 920  GKDNAAPDNTTLAIVLTALTELGRINDGISIHEYIKRSNLSMDGNLGVALIDMYSKCGRL 741
              D    +   L    + ++   + +DG++I   +       D     +LID Y K GR+
Sbjct: 186  --DLMPKEMKNLISWNSMISGYAQTSDGVNIASKLFAEMPEKDLISWNSLIDGYVKHGRM 243

Query: 740  DDALKVFDI-SANSVDHWNAMISGFACHGHGNXXXXXXXXXXXXXLKPDDITFIAVLSAC 564
            +DA  +F +     V  W  MI G+A  G  +                D + + ++++  
Sbjct: 244  EDAKDLFYVMPRRDVVTWATMIDGYAKLGFVHKAKTLFDQMPHR----DVVAYNSMMAGY 299

Query: 563  SHAGMVDEGLMCFERMQKEHGLEPKVQHYGCMVDILSRAGKLEEALGL 420
                   E L  F  M+KE  L P       ++  +++ G+L +A+ +
Sbjct: 300  VQNKYNMEALEIFSDMEKESHLSPDETTLVIVLSAIAQLGRLSKAMDM 347


>gb|AEN99828.1| chlororespiratory reduction 4 [Arabis hirsuta]
          Length = 615

 Score =  338 bits (868), Expect = 2e-90
 Identities = 157/339 (46%), Positives = 234/339 (69%), Gaps = 1/339 (0%)
 Frame = -1

Query: 1148 GRVVDAEDMFEKMPERDVISCTTMINGYMGLGRIDYAKKLFEAMAEKDLITWNTMMDGYV 969
            GR+ DA+D+F+KMP RDV++  TM++GY  LG +  AK LF+ M ++D++ +N+MM GYV
Sbjct: 268  GRIEDAKDLFDKMPRRDVVTWATMVDGYAKLGFVHQAKSLFDQMPQRDVVAYNSMMAGYV 327

Query: 968  KNGLSREALNLFANMRGKDNAAPDNTTLAIVLTALTELGRINDGISIHEYIKRSNLSMDG 789
            +N    EA+++F +M  + + +PD TTL IVL+A+ +LGR++  + +H Y       + G
Sbjct: 328  QNRYHMEAIDIFNDMEKESHLSPDETTLVIVLSAIAQLGRLSKAMDMHLYTVEKKFLLGG 387

Query: 788  NLGVALIDMYSKCGRLDDALKVFD-ISANSVDHWNAMISGFACHGHGNXXXXXXXXXXXX 612
             LGVALIDMYSKCG +  A+ VF+ I   S+DHWNAMI G A HG G             
Sbjct: 388  KLGVALIDMYSKCGSIQQAMGVFERIENKSIDHWNAMIGGLAIHGLGESAFDMLLQIERR 447

Query: 611  XLKPDDITFIAVLSACSHAGMVDEGLMCFERMQKEHGLEPKVQHYGCMVDILSRAGKLEE 432
             +KPDDITF+ VL+ACSH+G+V EGL+CFE M+++H +EP++QHYGCMVDILSR+G++E 
Sbjct: 448  SIKPDDITFVGVLNACSHSGLVKEGLLCFELMKRKHKIEPRLQHYGCMVDILSRSGRIEL 507

Query: 431  ALGLIRSMPMEPNDVVWRSLLSACRNHRDLDMGQKLVQCLTGERIWXXXXXXXXXXXYAG 252
            A  LI  MP+EPNDV+WR+ L+AC +H++ + G+ + + L  +  +           YA 
Sbjct: 508  AKNLIEEMPIEPNDVIWRTFLTACSHHKEFETGELVAKHLILQAGYNPSSYVLLSNMYAS 567

Query: 251  VGLWGDAWKLRMLMREKNMKKLPGCSSIEVDGKVYEFVV 135
            +G+W +  ++R +M+E+ ++K+PGCS IE+DG V+EF V
Sbjct: 568  LGMWKEVRRVRTMMKERKIQKIPGCSWIELDGSVHEFFV 606



 Score = 90.9 bits (224), Expect = 9e-16
 Identities = 72/273 (26%), Positives = 138/273 (50%), Gaps = 6/273 (2%)
 Frame = -1

Query: 1151 CGRVVDAEDMFEKMPERDVISCTTMINGYMGLGRIDYAKKLFEAM--AEKDLITWNTMMD 978
            CG +  A  +F++M +RD +S  +MI+GY+  G I+ A++LF+ M   +K+LI+WN+M++
Sbjct: 171  CGCLGFARQVFDRMSQRDSVSYNSMIDGYVKCGLIESARELFDLMPSEKKNLISWNSMIN 230

Query: 977  GYVKNGLSRE-ALNLFANMRGKDNAAPDNTTLAIVLTALTELGRINDGISIHEYIKRSNL 801
            GY +     + A NLF  M  KD  + ++     ++    + GRI D   + + + R   
Sbjct: 231  GYAQRADGVDIASNLFDEMPEKDLISWNS-----LIDGYVKHGRIEDAKDLFDKMPR--- 282

Query: 800  SMDGNLGVALIDMYSKCGRLDDALKVFD-ISANSVDHWNAMISGFACHG-HGNXXXXXXX 627
              D      ++D Y+K G +  A  +FD +    V  +N+M++G+  +  H         
Sbjct: 283  -RDVVTWATMVDGYAKLGFVHQAKSLFDQMPQRDVVAYNSMMAGYVQNRYHMEAIDIFND 341

Query: 626  XXXXXXLKPDDITFIAVLSACSHAGMVDEGL-MCFERMQKEHGLEPKVQHYGCMVDILSR 450
                  L PD+ T + VLSA +  G + + + M    ++K+  L  K+     ++D+ S+
Sbjct: 342  MEKESHLSPDETTLVIVLSAIAQLGRLSKAMDMHLYTVEKKFLLGGKLG--VALIDMYSK 399

Query: 449  AGKLEEALGLIRSMPMEPNDVVWRSLLSACRNH 351
             G +++A+G+   +  +  D  W +++     H
Sbjct: 400  CGSIQQAMGVFERIENKSID-HWNAMIGGLAIH 431



 Score = 61.6 bits (148), Expect = 6e-07
 Identities = 56/217 (25%), Positives = 102/217 (47%), Gaps = 3/217 (1%)
 Frame = -1

Query: 1010 KDLITWNTMMDGYVKNGLSREALNLFANMRGKDNAAPDNTTLAIVLTALTELGRINDGIS 831
            +D   WN ++  +      R+AL LF  M  K+  + D  +L++VL A + LG + +G+ 
Sbjct: 86   EDPFLWNAVIKSHSHGVEPRKALLLFFLML-KNGVSVDKFSLSLVLKACSRLGFVKEGMQ 144

Query: 830  IHEYIKRSNLSMDGNLGVALIDMYSKCGRLDDALKVFD-ISANSVDHWNAMISGFA-CHG 657
             H +++++ +  D  L   LI +Y KCG L  A +VFD +S      +N+MI G+  C  
Sbjct: 145  XHGFLRKTGIWSDLFLQNCLIGLYLKCGCLGFARQVFDRMSQRDSVSYNSMIDGYVKC-- 202

Query: 656  HGNXXXXXXXXXXXXXLKPDDITFIAVLSA-CSHAGMVDEGLMCFERMQKEHGLEPKVQH 480
             G               K + I++ ++++     A  VD     F+ M      E  +  
Sbjct: 203  -GLIESARELFDLMPSEKKNLISWNSMINGYAQRADGVDIASNLFDEMP-----EKDLIS 256

Query: 479  YGCMVDILSRAGKLEEALGLIRSMPMEPNDVVWRSLL 369
            +  ++D   + G++E+A  L   MP   + V W +++
Sbjct: 257  WNSLIDGYVKHGRIEDAKDLFDKMPRR-DVVTWATMV 292


>gb|AEN99832.1| chlororespiratory reduction 4 [Capsella bursa-pastoris]
          Length = 617

 Score =  338 bits (867), Expect = 2e-90
 Identities = 160/339 (47%), Positives = 233/339 (68%), Gaps = 1/339 (0%)
 Frame = -1

Query: 1148 GRVVDAEDMFEKMPERDVISCTTMINGYMGLGRIDYAKKLFEAMAEKDLITWNTMMDGYV 969
            GR+ DA+D+F+ MP RDV++  TMI+GY  LG +  AK LF+ M  +D++++N+MM GYV
Sbjct: 270  GRIEDAKDLFDAMPRRDVVTWATMIDGYAKLGFVHQAKTLFDQMPHRDVVSYNSMMAGYV 329

Query: 968  KNGLSREALNLFANMRGKDNAAPDNTTLAIVLTALTELGRINDGISIHEYIKRSNLSMDG 789
            +N    EAL +F++M  + + +PD TTL IVL+A+ +LGR++  + +H YI      + G
Sbjct: 330  QNKYHMEALEIFSDMEKESHLSPDETTLVIVLSAIAQLGRLSKAMDMHLYIVEKQFFLGG 389

Query: 788  NLGVALIDMYSKCGRLDDALKVFD-ISANSVDHWNAMISGFACHGHGNXXXXXXXXXXXX 612
             LGVALIDMYSKCG +  A+ VF+ I   S+DHWNAMI G A HG G             
Sbjct: 390  KLGVALIDMYSKCGSIQHAMLVFEGIENKSIDHWNAMIGGLAIHGLGESAFDMLLQIERR 449

Query: 611  XLKPDDITFIAVLSACSHAGMVDEGLMCFERMQKEHGLEPKVQHYGCMVDILSRAGKLEE 432
             +KPDDITF+ VL+ACSH+G+V EGL+CFE M+++H +EP++QHYGCMVDILSR+G +E 
Sbjct: 450  SIKPDDITFVGVLNACSHSGLVKEGLLCFELMRRKHKIEPRLQHYGCMVDILSRSGSIEL 509

Query: 431  ALGLIRSMPMEPNDVVWRSLLSACRNHRDLDMGQKLVQCLTGERIWXXXXXXXXXXXYAG 252
            A  LI+ MP+EPNDV+WR+ L+AC +H++ + G+ + + L  +  +           YA 
Sbjct: 510  AKNLIQEMPIEPNDVIWRTFLTACNHHKEFETGELVGKHLILQAGYNPSSYVLLSNMYAS 569

Query: 251  VGLWGDAWKLRMLMREKNMKKLPGCSSIEVDGKVYEFVV 135
             G W D  ++R +M+E+ ++K+PGCS IE+DG+V+EF V
Sbjct: 570  FGKWKDVRRIRTMMKERKIEKIPGCSWIELDGRVHEFFV 608



 Score = 69.7 bits (169), Expect = 2e-09
 Identities = 55/228 (24%), Positives = 104/228 (45%), Gaps = 1/228 (0%)
 Frame = -1

Query: 1100 DVISCTTMINGYMGLGRIDYAKKLFEAMAEKDLITWNTMMDGYVKNGLSREALNLFANMR 921
            D+     +I  Y+  G + +A+++F+ M ++D +++N+M+DGYVK GL   A  LF    
Sbjct: 159  DLFLQNCLIGLYLKCGCLGFARQIFDRMPQRDSVSFNSMIDGYVKRGLIESARELF---- 214

Query: 920  GKDNAAPDNTTLAIVLTALTELGRINDGISIHEYIKRSNLSMDGNLGVALIDMYSKCGRL 741
              D    +   L    + ++   + +DG+ I   +       D     ++ID Y K GR+
Sbjct: 215  --DLMPREVKNLISWNSIISGYAQTSDGVDIASNLFAEMPEKDLISWNSMIDGYVKHGRI 272

Query: 740  DDALKVFD-ISANSVDHWNAMISGFACHGHGNXXXXXXXXXXXXXLKPDDITFIAVLSAC 564
            +DA  +FD +    V  W  MI G+A  G  +                D +++ ++++  
Sbjct: 273  EDAKDLFDAMPRRDVVTWATMIDGYAKLGFVHQAKTLFDQMPHR----DVVSYNSMMAGY 328

Query: 563  SHAGMVDEGLMCFERMQKEHGLEPKVQHYGCMVDILSRAGKLEEALGL 420
                   E L  F  M+KE  L P       ++  +++ G+L +A+ +
Sbjct: 329  VQNKYHMEALEIFSDMEKESHLSPDETTLVIVLSAIAQLGRLSKAMDM 376


>gb|AEN99826.1| chlororespiratory reduction 4, partial [Aethionema cordifolium]
          Length = 587

 Score =  338 bits (867), Expect = 2e-90
 Identities = 162/339 (47%), Positives = 232/339 (68%), Gaps = 1/339 (0%)
 Frame = -1

Query: 1148 GRVVDAEDMFEKMPERDVISCTTMINGYMGLGRIDYAKKLFEAMAEKDLITWNTMMDGYV 969
            GR+ DA+D+F  MP RDV++  TMI+GY  LG +  AK LF+ M  +D++ +N+MM GYV
Sbjct: 244  GRMEDAKDLFYVMPRRDVVTWATMIDGYAKLGFVHKAKTLFDQMPHRDVVAYNSMMAGYV 303

Query: 968  KNGLSREALNLFANMRGKDNAAPDNTTLAIVLTALTELGRINDGISIHEYIKRSNLSMDG 789
            +N    EAL +F NM    + +PD TTL IVL+A+ +LGR++  +S+++YI   +  + G
Sbjct: 304  QNKYHMEALEIFNNMEKDSHLSPDETTLVIVLSAIAQLGRLSKAMSMNKYIVEKSFPLGG 363

Query: 788  NLGVALIDMYSKCGRLDDALKVFD-ISANSVDHWNAMISGFACHGHGNXXXXXXXXXXXX 612
             LGVALIDM+SKCG +  A+ VF+ I   S+DHWNAMI G A HGHG             
Sbjct: 364  KLGVALIDMHSKCGSIQQAISVFEGIKNKSIDHWNAMIGGLAIHGHGELAFDMLMQIERC 423

Query: 611  XLKPDDITFIAVLSACSHAGMVDEGLMCFERMQKEHGLEPKVQHYGCMVDILSRAGKLEE 432
             +KPDDITFI VL+ACSH+G+V EGL+ FE M+++H +EP++QHYGC+VDILSR+G +E 
Sbjct: 424  SIKPDDITFIGVLNACSHSGLVKEGLLSFELMRRKHKIEPRLQHYGCIVDILSRSGSIEL 483

Query: 431  ALGLIRSMPMEPNDVVWRSLLSACRNHRDLDMGQKLVQCLTGERIWXXXXXXXXXXXYAG 252
            A  LI  MPMEPNDV+WR+ L ACRN ++ ++G+ + + L  +  +           YA 
Sbjct: 484  AKHLIEDMPMEPNDVIWRTFLIACRNRKEFEIGELVAKHLILQAGYNPSSYVLLSNMYAS 543

Query: 251  VGLWGDAWKLRMLMREKNMKKLPGCSSIEVDGKVYEFVV 135
            +G+W D  ++RM+M+++ + K+PGCS IE+DG V+EF V
Sbjct: 544  LGMWKDVRRVRMMMKQRKLHKIPGCSWIELDGNVHEFFV 582



 Score = 67.0 bits (162), Expect = 1e-08
 Identities = 54/228 (23%), Positives = 103/228 (45%), Gaps = 1/228 (0%)
 Frame = -1

Query: 1100 DVISCTTMINGYMGLGRIDYAKKLFEAMAEKDLITWNTMMDGYVKNGLSREALNLFANMR 921
            D+     +I  Y+  G + +A+++F+ M ++D +++N+M+DGYVK GL   A  LF    
Sbjct: 133  DLFLQNCLIGLYLKCGCLGFARQIFDRMPQRDSVSYNSMIDGYVKCGLIGSARELF---- 188

Query: 920  GKDNAAPDNTTLAIVLTALTELGRINDGISIHEYIKRSNLSMDGNLGVALIDMYSKCGRL 741
              D    +   L    + ++   + +DG++I   +       D     +LID Y K GR+
Sbjct: 189  --DLMPKEMKNLISWNSMISGYAQTSDGVNIASKLFAEMPEKDLISWNSLIDGYVKHGRM 246

Query: 740  DDALKVFDI-SANSVDHWNAMISGFACHGHGNXXXXXXXXXXXXXLKPDDITFIAVLSAC 564
            +DA  +F +     V  W  MI G+A  G  +                D + + ++++  
Sbjct: 247  EDAKDLFYVMPRRDVVTWATMIDGYAKLGFVHKAKTLFDQMPHR----DVVAYNSMMAGY 302

Query: 563  SHAGMVDEGLMCFERMQKEHGLEPKVQHYGCMVDILSRAGKLEEALGL 420
                   E L  F  M+K+  L P       ++  +++ G+L +A+ +
Sbjct: 303  VQNKYHMEALEIFNNMEKDSHLSPDETTLVIVLSAIAQLGRLSKAMSM 350


>gb|AEN99840.1| chlororespiratory reduction 4, partial [Olimarabidopsis pumila]
          Length = 579

 Score =  337 bits (865), Expect = 4e-90
 Identities = 159/339 (46%), Positives = 231/339 (68%), Gaps = 1/339 (0%)
 Frame = -1

Query: 1148 GRVVDAEDMFEKMPERDVISCTTMINGYMGLGRIDYAKKLFEAMAEKDLITWNTMMDGYV 969
            GR+ DA+D+F+ +P RDV++  TMI+GY  LG +  AK LF+ M  +D++ +N+MM GYV
Sbjct: 232  GRIEDAKDLFDMVPRRDVVTWATMIDGYAKLGFVHQAKTLFDQMPHRDVVAYNSMMAGYV 291

Query: 968  KNGLSREALNLFANMRGKDNAAPDNTTLAIVLTALTELGRINDGISIHEYIKRSNLSMDG 789
            +N    EAL +F++M  + + +PD TTL IVL+A+ +LGR++  + +H YI      + G
Sbjct: 292  QNRFHMEALEIFSDMEKESHLSPDETTLVIVLSAIAQLGRLSKAMDMHLYIVEKQFLLGG 351

Query: 788  NLGVALIDMYSKCGRLDDALKVFD-ISANSVDHWNAMISGFACHGHGNXXXXXXXXXXXX 612
             LGVALIDMYSKCG +  A+ VF+ I   S+DHWNAMI G A HG G             
Sbjct: 352  KLGVALIDMYSKCGSIQHAMLVFEGIENKSIDHWNAMIGGLAIHGLGESAFDMLLQIERR 411

Query: 611  XLKPDDITFIAVLSACSHAGMVDEGLMCFERMQKEHGLEPKVQHYGCMVDILSRAGKLEE 432
             +KPDDITF+ VL+ACSH+G+V EGL+CFE M+++H +EP++QHYGCMVDILSR+G +E 
Sbjct: 412  SIKPDDITFVGVLNACSHSGLVKEGLLCFELMRRKHKIEPRLQHYGCMVDILSRSGSIEL 471

Query: 431  ALGLIRSMPMEPNDVVWRSLLSACRNHRDLDMGQKLVQCLTGERIWXXXXXXXXXXXYAG 252
            A  LI  MP+EPNDV+WR+ L+AC +H++ + G+ + + L  +  +           YA 
Sbjct: 472  AKNLIEEMPIEPNDVIWRTFLTACSHHKEFETGELVAKHLILQADYNPSSYVLLSNMYAS 531

Query: 251  VGLWGDAWKLRMLMREKNMKKLPGCSSIEVDGKVYEFVV 135
             G+W D  ++R +M+E+ ++K+PGCS IE+DG V+EF V
Sbjct: 532  FGMWKDVRRVRTMMKERKIEKIPGCSWIELDGXVHEFFV 570



 Score = 66.2 bits (160), Expect = 2e-08
 Identities = 53/228 (23%), Positives = 102/228 (44%), Gaps = 1/228 (0%)
 Frame = -1

Query: 1100 DVISCTTMINGYMGLGRIDYAKKLFEAMAEKDLITWNTMMDGYVKNGLSREALNLFANMR 921
            D+     +I  Y+  G + +A+++F+ M ++D +++N+M+DGYVK G    A  LF    
Sbjct: 121  DLFLQNCLIGLYLKCGCLGFARQIFDRMPQRDSVSYNSMIDGYVKCGSIESASELF---- 176

Query: 920  GKDNAAPDNTTLAIVLTALTELGRINDGISIHEYIKRSNLSMDGNLGVALIDMYSKCGRL 741
              D    +   L    + ++   + ++G+ I   +       D     ++ID Y K GR+
Sbjct: 177  --DLMPREMKNLISWNSLISGYAQTSEGVDIASKLFAEMPEKDLISWNSMIDGYVKHGRI 234

Query: 740  DDALKVFD-ISANSVDHWNAMISGFACHGHGNXXXXXXXXXXXXXLKPDDITFIAVLSAC 564
            +DA  +FD +    V  W  MI G+A  G  +                D + + ++++  
Sbjct: 235  EDAKDLFDMVPRRDVVTWATMIDGYAKLGFVHQAKTLFDQMPHR----DVVAYNSMMAGY 290

Query: 563  SHAGMVDEGLMCFERMQKEHGLEPKVQHYGCMVDILSRAGKLEEALGL 420
                   E L  F  M+KE  L P       ++  +++ G+L +A+ +
Sbjct: 291  VQNRFHMEALEIFSDMEKESHLSPDETTLVIVLSAIAQLGRLSKAMDM 338


>ref|NP_182060.2| chlororespiratory reduction 4 protein [Arabidopsis thaliana]
            gi|218546767|sp|O22137.2|PP202_ARATH RecName:
            Full=Pentatricopeptide repeat-containing protein
            At2g45350, chloroplastic; AltName: Full=Protein
            CHLORORESPIRATORY REDUCTION 4; Flags: Precursor
            gi|330255448|gb|AEC10542.1| chlororespiratory reduction 4
            protein [Arabidopsis thaliana]
          Length = 613

 Score =  337 bits (865), Expect = 4e-90
 Identities = 161/339 (47%), Positives = 231/339 (68%), Gaps = 1/339 (0%)
 Frame = -1

Query: 1148 GRVVDAEDMFEKMPERDVISCTTMINGYMGLGRIDYAKKLFEAMAEKDLITWNTMMDGYV 969
            GR+ DA+ +F+ MP RDV++  TMI+GY  LG + +AK LF+ M  +D++ +N+MM GYV
Sbjct: 266  GRIEDAKGLFDVMPRRDVVTWATMIDGYAKLGFVHHAKTLFDQMPHRDVVAYNSMMAGYV 325

Query: 968  KNGLSREALNLFANMRGKDNAAPDNTTLAIVLTALTELGRINDGISIHEYIKRSNLSMDG 789
            +N    EAL +F++M  + +  PD+TTL IVL A+ +LGR++  I +H YI      + G
Sbjct: 326  QNKYHMEALEIFSDMEKESHLLPDDTTLVIVLPAIAQLGRLSKAIDMHLYIVEKQFYLGG 385

Query: 788  NLGVALIDMYSKCGRLDDALKVFD-ISANSVDHWNAMISGFACHGHGNXXXXXXXXXXXX 612
             LGVALIDMYSKCG +  A+ VF+ I   S+DHWNAMI G A HG G             
Sbjct: 386  KLGVALIDMYSKCGSIQHAMLVFEGIENKSIDHWNAMIGGLAIHGLGESAFDMLLQIERL 445

Query: 611  XLKPDDITFIAVLSACSHAGMVDEGLMCFERMQKEHGLEPKVQHYGCMVDILSRAGKLEE 432
             LKPDDITF+ VL+ACSH+G+V EGL+CFE M+++H +EP++QHYGCMVDILSR+G +E 
Sbjct: 446  SLKPDDITFVGVLNACSHSGLVKEGLLCFELMRRKHKIEPRLQHYGCMVDILSRSGSIEL 505

Query: 431  ALGLIRSMPMEPNDVVWRSLLSACRNHRDLDMGQKLVQCLTGERIWXXXXXXXXXXXYAG 252
            A  LI  MP+EPNDV+WR+ L+AC +H++ + G+ + + L  +  +           YA 
Sbjct: 506  AKNLIEEMPVEPNDVIWRTFLTACSHHKEFETGELVAKHLILQAGYNPSSYVLLSNMYAS 565

Query: 251  VGLWGDAWKLRMLMREKNMKKLPGCSSIEVDGKVYEFVV 135
             G+W D  ++R +M+E+ ++K+PGCS IE+DG+V+EF V
Sbjct: 566  FGMWKDVRRVRTMMKERKIEKIPGCSWIELDGRVHEFFV 604



 Score = 84.7 bits (208), Expect = 6e-14
 Identities = 73/273 (26%), Positives = 134/273 (49%), Gaps = 6/273 (2%)
 Frame = -1

Query: 1151 CGRVVDAEDMFEKMPERDVISCTTMINGYMGLGRIDYAKKLFE--AMAEKDLITWNTMMD 978
            CG +  +  MF++MP+RD +S  +MI+GY+  G I  A++LF+   M  K+LI+WN+M+ 
Sbjct: 169  CGCLGLSRQMFDRMPKRDSVSYNSMIDGYVKCGLIVSARELFDLMPMEMKNLISWNSMIS 228

Query: 977  GYVKNGLSRE-ALNLFANMRGKDNAAPDNTTLAIVLTALTELGRINDGISIHEYIKRSNL 801
            GY +     + A  LFA+M  KD  + ++     ++    + GRI D   + + + R   
Sbjct: 229  GYAQTSDGVDIASKLFADMPEKDLISWNS-----MIDGYVKHGRIEDAKGLFDVMPR--- 280

Query: 800  SMDGNLGVALIDMYSKCGRLDDALKVFD-ISANSVDHWNAMISGFACHG-HGNXXXXXXX 627
              D      +ID Y+K G +  A  +FD +    V  +N+M++G+  +  H         
Sbjct: 281  -RDVVTWATMIDGYAKLGFVHHAKTLFDQMPHRDVVAYNSMMAGYVQNKYHMEALEIFSD 339

Query: 626  XXXXXXLKPDDITFIAVLSACSHAGMVDEGL-MCFERMQKEHGLEPKVQHYGCMVDILSR 450
                  L PDD T + VL A +  G + + + M    ++K+  L  K+     ++D+ S+
Sbjct: 340  MEKESHLLPDDTTLVIVLPAIAQLGRLSKAIDMHLYIVEKQFYLGGKLG--VALIDMYSK 397

Query: 449  AGKLEEALGLIRSMPMEPNDVVWRSLLSACRNH 351
             G ++ A+ +   +  +  D  W +++     H
Sbjct: 398  CGSIQHAMLVFEGIENKSID-HWNAMIGGLAIH 429



 Score = 63.2 bits (152), Expect = 2e-07
 Identities = 54/228 (23%), Positives = 102/228 (44%), Gaps = 1/228 (0%)
 Frame = -1

Query: 1100 DVISCTTMINGYMGLGRIDYAKKLFEAMAEKDLITWNTMMDGYVKNGLSREALNLFANMR 921
            D+     +I  Y+  G +  ++++F+ M ++D +++N+M+DGYVK GL   A  LF    
Sbjct: 155  DLFLQNCLIGLYLKCGCLGLSRQMFDRMPKRDSVSYNSMIDGYVKCGLIVSARELF---- 210

Query: 920  GKDNAAPDNTTLAIVLTALTELGRINDGISIHEYIKRSNLSMDGNLGVALIDMYSKCGRL 741
              D    +   L    + ++   + +DG+ I   +       D     ++ID Y K GR+
Sbjct: 211  --DLMPMEMKNLISWNSMISGYAQTSDGVDIASKLFADMPEKDLISWNSMIDGYVKHGRI 268

Query: 740  DDALKVFDI-SANSVDHWNAMISGFACHGHGNXXXXXXXXXXXXXLKPDDITFIAVLSAC 564
            +DA  +FD+     V  W  MI G+A  G  +                D + + ++++  
Sbjct: 269  EDAKGLFDVMPRRDVVTWATMIDGYAKLGFVHHAKTLFDQMPHR----DVVAYNSMMAGY 324

Query: 563  SHAGMVDEGLMCFERMQKEHGLEPKVQHYGCMVDILSRAGKLEEALGL 420
                   E L  F  M+KE  L P       ++  +++ G+L +A+ +
Sbjct: 325  VQNKYHMEALEIFSDMEKESHLLPDDTTLVIVLPAIAQLGRLSKAIDM 372


>gb|AAB82628.1| hypothetical protein [Arabidopsis thaliana]
          Length = 606

 Score =  337 bits (865), Expect = 4e-90
 Identities = 161/339 (47%), Positives = 231/339 (68%), Gaps = 1/339 (0%)
 Frame = -1

Query: 1148 GRVVDAEDMFEKMPERDVISCTTMINGYMGLGRIDYAKKLFEAMAEKDLITWNTMMDGYV 969
            GR+ DA+ +F+ MP RDV++  TMI+GY  LG + +AK LF+ M  +D++ +N+MM GYV
Sbjct: 259  GRIEDAKGLFDVMPRRDVVTWATMIDGYAKLGFVHHAKTLFDQMPHRDVVAYNSMMAGYV 318

Query: 968  KNGLSREALNLFANMRGKDNAAPDNTTLAIVLTALTELGRINDGISIHEYIKRSNLSMDG 789
            +N    EAL +F++M  + +  PD+TTL IVL A+ +LGR++  I +H YI      + G
Sbjct: 319  QNKYHMEALEIFSDMEKESHLLPDDTTLVIVLPAIAQLGRLSKAIDMHLYIVEKQFYLGG 378

Query: 788  NLGVALIDMYSKCGRLDDALKVFD-ISANSVDHWNAMISGFACHGHGNXXXXXXXXXXXX 612
             LGVALIDMYSKCG +  A+ VF+ I   S+DHWNAMI G A HG G             
Sbjct: 379  KLGVALIDMYSKCGSIQHAMLVFEGIENKSIDHWNAMIGGLAIHGLGESAFDMLLQIERL 438

Query: 611  XLKPDDITFIAVLSACSHAGMVDEGLMCFERMQKEHGLEPKVQHYGCMVDILSRAGKLEE 432
             LKPDDITF+ VL+ACSH+G+V EGL+CFE M+++H +EP++QHYGCMVDILSR+G +E 
Sbjct: 439  SLKPDDITFVGVLNACSHSGLVKEGLLCFELMRRKHKIEPRLQHYGCMVDILSRSGSIEL 498

Query: 431  ALGLIRSMPMEPNDVVWRSLLSACRNHRDLDMGQKLVQCLTGERIWXXXXXXXXXXXYAG 252
            A  LI  MP+EPNDV+WR+ L+AC +H++ + G+ + + L  +  +           YA 
Sbjct: 499  AKNLIEEMPVEPNDVIWRTFLTACSHHKEFETGELVAKHLILQAGYNPSSYVLLSNMYAS 558

Query: 251  VGLWGDAWKLRMLMREKNMKKLPGCSSIEVDGKVYEFVV 135
             G+W D  ++R +M+E+ ++K+PGCS IE+DG+V+EF V
Sbjct: 559  FGMWKDVRRVRTMMKERKIEKIPGCSWIELDGRVHEFFV 597



 Score = 84.7 bits (208), Expect = 6e-14
 Identities = 73/273 (26%), Positives = 134/273 (49%), Gaps = 6/273 (2%)
 Frame = -1

Query: 1151 CGRVVDAEDMFEKMPERDVISCTTMINGYMGLGRIDYAKKLFE--AMAEKDLITWNTMMD 978
            CG +  +  MF++MP+RD +S  +MI+GY+  G I  A++LF+   M  K+LI+WN+M+ 
Sbjct: 162  CGCLGLSRQMFDRMPKRDSVSYNSMIDGYVKCGLIVSARELFDLMPMEMKNLISWNSMIS 221

Query: 977  GYVKNGLSRE-ALNLFANMRGKDNAAPDNTTLAIVLTALTELGRINDGISIHEYIKRSNL 801
            GY +     + A  LFA+M  KD  + ++     ++    + GRI D   + + + R   
Sbjct: 222  GYAQTSDGVDIASKLFADMPEKDLISWNS-----MIDGYVKHGRIEDAKGLFDVMPR--- 273

Query: 800  SMDGNLGVALIDMYSKCGRLDDALKVFD-ISANSVDHWNAMISGFACHG-HGNXXXXXXX 627
              D      +ID Y+K G +  A  +FD +    V  +N+M++G+  +  H         
Sbjct: 274  -RDVVTWATMIDGYAKLGFVHHAKTLFDQMPHRDVVAYNSMMAGYVQNKYHMEALEIFSD 332

Query: 626  XXXXXXLKPDDITFIAVLSACSHAGMVDEGL-MCFERMQKEHGLEPKVQHYGCMVDILSR 450
                  L PDD T + VL A +  G + + + M    ++K+  L  K+     ++D+ S+
Sbjct: 333  MEKESHLLPDDTTLVIVLPAIAQLGRLSKAIDMHLYIVEKQFYLGGKLG--VALIDMYSK 390

Query: 449  AGKLEEALGLIRSMPMEPNDVVWRSLLSACRNH 351
             G ++ A+ +   +  +  D  W +++     H
Sbjct: 391  CGSIQHAMLVFEGIENKSID-HWNAMIGGLAIH 422



 Score = 63.2 bits (152), Expect = 2e-07
 Identities = 54/228 (23%), Positives = 102/228 (44%), Gaps = 1/228 (0%)
 Frame = -1

Query: 1100 DVISCTTMINGYMGLGRIDYAKKLFEAMAEKDLITWNTMMDGYVKNGLSREALNLFANMR 921
            D+     +I  Y+  G +  ++++F+ M ++D +++N+M+DGYVK GL   A  LF    
Sbjct: 148  DLFLQNCLIGLYLKCGCLGLSRQMFDRMPKRDSVSYNSMIDGYVKCGLIVSARELF---- 203

Query: 920  GKDNAAPDNTTLAIVLTALTELGRINDGISIHEYIKRSNLSMDGNLGVALIDMYSKCGRL 741
              D    +   L    + ++   + +DG+ I   +       D     ++ID Y K GR+
Sbjct: 204  --DLMPMEMKNLISWNSMISGYAQTSDGVDIASKLFADMPEKDLISWNSMIDGYVKHGRI 261

Query: 740  DDALKVFDI-SANSVDHWNAMISGFACHGHGNXXXXXXXXXXXXXLKPDDITFIAVLSAC 564
            +DA  +FD+     V  W  MI G+A  G  +                D + + ++++  
Sbjct: 262  EDAKGLFDVMPRRDVVTWATMIDGYAKLGFVHHAKTLFDQMPHR----DVVAYNSMMAGY 317

Query: 563  SHAGMVDEGLMCFERMQKEHGLEPKVQHYGCMVDILSRAGKLEEALGL 420
                   E L  F  M+KE  L P       ++  +++ G+L +A+ +
Sbjct: 318  VQNKYHMEALEIFSDMEKESHLLPDDTTLVIVLPAIAQLGRLSKAIDM 365


>ref|XP_006296085.1| hypothetical protein CARUB_v10025235mg [Capsella rubella]
            gi|482564793|gb|EOA28983.1| hypothetical protein
            CARUB_v10025235mg [Capsella rubella]
          Length = 607

 Score =  335 bits (860), Expect = 2e-89
 Identities = 159/339 (46%), Positives = 233/339 (68%), Gaps = 1/339 (0%)
 Frame = -1

Query: 1148 GRVVDAEDMFEKMPERDVISCTTMINGYMGLGRIDYAKKLFEAMAEKDLITWNTMMDGYV 969
            GR+ DA+++F+ MP RDV++  TMI+GY  LG +  AK LF+ M  +D++++N+MM GYV
Sbjct: 260  GRIEDAKELFDVMPSRDVVTWATMIDGYAKLGFVHQAKTLFDQMPHRDVVSYNSMMAGYV 319

Query: 968  KNGLSREALNLFANMRGKDNAAPDNTTLAIVLTALTELGRINDGISIHEYIKRSNLSMDG 789
            +N    EAL +F++M  + + +PD TTL IVL+A+ +LGR++  + +H YI      + G
Sbjct: 320  QNKYHMEALEIFSHMEKESHLSPDETTLVIVLSAIAQLGRLSKAMDMHLYIVEKQFFLGG 379

Query: 788  NLGVALIDMYSKCGRLDDALKVFD-ISANSVDHWNAMISGFACHGHGNXXXXXXXXXXXX 612
             LGVALIDMYSKCG +  A+ VF+ I   S+DHWNAMI G A HG G             
Sbjct: 380  KLGVALIDMYSKCGSIQHAMLVFEGIENKSIDHWNAMIGGLAIHGLGESAFDMLLQIERR 439

Query: 611  XLKPDDITFIAVLSACSHAGMVDEGLMCFERMQKEHGLEPKVQHYGCMVDILSRAGKLEE 432
             +KPDDITF+ VL+ACSH+G+V EGL+CFE M+++H +EP++QHYGCMVDILSR+G +E 
Sbjct: 440  SIKPDDITFVGVLNACSHSGLVKEGLLCFELMRRKHKIEPRLQHYGCMVDILSRSGSIEL 499

Query: 431  ALGLIRSMPMEPNDVVWRSLLSACRNHRDLDMGQKLVQCLTGERIWXXXXXXXXXXXYAG 252
            A  LI+ MP+EPNDV+WR+ L+AC +H++ + G+ + + L  +  +           YA 
Sbjct: 500  AKNLIQEMPIEPNDVIWRTFLTACNHHKEFETGELVGKHLILQAGYNPSSYVLLSNMYAS 559

Query: 251  VGLWGDAWKLRMLMREKNMKKLPGCSSIEVDGKVYEFVV 135
             G W D  ++R +M+E+ ++K+PGCS IE+DG+V+EF V
Sbjct: 560  FGKWKDVRRVRTMMKERKIEKVPGCSWIELDGRVHEFFV 598



 Score = 66.2 bits (160), Expect = 2e-08
 Identities = 53/228 (23%), Positives = 104/228 (45%), Gaps = 1/228 (0%)
 Frame = -1

Query: 1100 DVISCTTMINGYMGLGRIDYAKKLFEAMAEKDLITWNTMMDGYVKNGLSREALNLFANMR 921
            D+     +I  Y+  G + +A+++F+ M ++D +++N+M+DGYVK G    A  LF    
Sbjct: 149  DLFLHNCLIGLYLKCGCLGFARQIFDRMPQRDSVSFNSMIDGYVKCGSIESARELF---- 204

Query: 920  GKDNAAPDNTTLAIVLTALTELGRINDGISIHEYIKRSNLSMDGNLGVALIDMYSKCGRL 741
              D    +   L    + ++   + ++G  I   +       D     ++ID Y K GR+
Sbjct: 205  --DLMPREVKNLISWNSIISGYAQASNGFDIASKLFAEMPEKDLISWNSMIDGYVKHGRI 262

Query: 740  DDALKVFDI-SANSVDHWNAMISGFACHGHGNXXXXXXXXXXXXXLKPDDITFIAVLSAC 564
            +DA ++FD+  +  V  W  MI G+A  G  +                D +++ ++++  
Sbjct: 263  EDAKELFDVMPSRDVVTWATMIDGYAKLGFVHQAKTLFDQMPHR----DVVSYNSMMAGY 318

Query: 563  SHAGMVDEGLMCFERMQKEHGLEPKVQHYGCMVDILSRAGKLEEALGL 420
                   E L  F  M+KE  L P       ++  +++ G+L +A+ +
Sbjct: 319  VQNKYHMEALEIFSHMEKESHLSPDETTLVIVLSAIAQLGRLSKAMDM 366



 Score = 58.9 bits (141), Expect = 4e-06
 Identities = 54/217 (24%), Positives = 100/217 (46%), Gaps = 3/217 (1%)
 Frame = -1

Query: 1010 KDLITWNTMMDGYVKNGLSREALNLFANMRGKDNAAPDNTTLAIVLTALTELGRINDGIS 831
            KD   WN ++  +      ++AL LF  M  ++  + D  ++++VL A + LG +  G+ 
Sbjct: 78   KDPFLWNAVIKSHSHGKDPKQALLLFCLML-ENGVSVDEFSMSLVLKACSRLGFVKGGLQ 136

Query: 830  IHEYIKRSNLSMDGNLGVALIDMYSKCGRLDDALKVFD-ISANSVDHWNAMISGFA-CHG 657
            IH +++++ L  D  L   LI +Y KCG L  A ++FD +       +N+MI G+  C  
Sbjct: 137  IHGFLRKTGLWSDLFLHNCLIGLYLKCGCLGFARQIFDRMPQRDSVSFNSMIDGYVKC-- 194

Query: 656  HGNXXXXXXXXXXXXXLKPDDITFIAVLSACSHAGM-VDEGLMCFERMQKEHGLEPKVQH 480
             G+                + I++ +++S  + A    D     F  M      E  +  
Sbjct: 195  -GSIESARELFDLMPREVKNLISWNSIISGYAQASNGFDIASKLFAEMP-----EKDLIS 248

Query: 479  YGCMVDILSRAGKLEEALGLIRSMPMEPNDVVWRSLL 369
            +  M+D   + G++E+A  L   MP   + V W +++
Sbjct: 249  WNSMIDGYVKHGRIEDAKELFDVMPSR-DVVTWATMI 284


>gb|AEN99834.1| chlororespiratory reduction 4 [Draba nemorosa]
          Length = 612

 Score =  335 bits (860), Expect = 2e-89
 Identities = 158/339 (46%), Positives = 231/339 (68%), Gaps = 1/339 (0%)
 Frame = -1

Query: 1148 GRVVDAEDMFEKMPERDVISCTTMINGYMGLGRIDYAKKLFEAMAEKDLITWNTMMDGYV 969
            GR+ DA+ +F KMP+RDV++  TM++GY  LG +  AK LF+ M  +D++ +N+M+ GYV
Sbjct: 266  GRMEDAKSLFNKMPKRDVVTWATMVDGYAKLGFVHQAKSLFDRMPLRDVVAYNSMITGYV 325

Query: 968  KNGLSREALNLFANMRGKDNAAPDNTTLAIVLTALTELGRINDGISIHEYIKRSNLSMDG 789
            +N   +EA+ +F +M  + + +PD TTL IVL+A+ +LGR++  + IH YI  +   + G
Sbjct: 326  QNRYHKEAIGIFNDMEKESHLSPDETTLVIVLSAIAQLGRLSKAVDIHLYIMDNKFRLGG 385

Query: 788  NLGVALIDMYSKCGRLDDALKVFD-ISANSVDHWNAMISGFACHGHGNXXXXXXXXXXXX 612
             LGVALID YSKCG +  +++VF+ I   S+DHWNAMI G A HG G             
Sbjct: 386  KLGVALIDTYSKCGSIQKSMRVFEEIENKSIDHWNAMIGGLAIHGLGESAFDMLLQIEKR 445

Query: 611  XLKPDDITFIAVLSACSHAGMVDEGLMCFERMQKEHGLEPKVQHYGCMVDILSRAGKLEE 432
             +KPDDITFI VL+ACSH+G+V EGL+CFE M+++H +EPK+QHYGCMVDILSR+G +E 
Sbjct: 446  SIKPDDITFIGVLNACSHSGLVKEGLLCFELMRRKHKIEPKLQHYGCMVDILSRSGSIEL 505

Query: 431  ALGLIRSMPMEPNDVVWRSLLSACRNHRDLDMGQKLVQCLTGERIWXXXXXXXXXXXYAG 252
            A  LI  MP+EPNDV+WR+ L+AC NH++ + G+ + + L  +  +           YA 
Sbjct: 506  AKNLIEEMPIEPNDVIWRTFLTACSNHKEFETGELVAKHLFLQGGYNPSSFVLLSNMYAS 565

Query: 251  VGLWGDAWKLRMLMREKNMKKLPGCSSIEVDGKVYEFVV 135
             G+W +  ++R  M+E+ ++K+PGCS IE+DG V+EF V
Sbjct: 566  FGMWKEVRRVRTTMKERKLRKIPGCSWIELDGNVHEFFV 604



 Score = 63.9 bits (154), Expect = 1e-07
 Identities = 51/221 (23%), Positives = 100/221 (45%), Gaps = 1/221 (0%)
 Frame = -1

Query: 1079 MINGYMGLGRIDYAKKLFEAMAEKDLITWNTMMDGYVKNGLSREALNLFANMRGKDNAAP 900
            +I  Y+  G + YA+++F+ M  +D +++N+M+DGYVK G+   A  LF      D    
Sbjct: 162  LIGLYIKCGCLGYARQVFDRMPRRDSVSYNSMIDGYVKCGMIESARGLF------DLMPK 215

Query: 899  DNTTLAIVLTALTELGRINDGISIHEYIKRSNLSMDGNLGVALIDMYSKCGRLDDALKVF 720
            +   L      ++   +  DG+++ + +       D     +LID Y K GR++DA  +F
Sbjct: 216  EKKNLISWNFMISGYAQRADGVNVAKKLFDEMPEKDLISWNSLIDGYVKHGRMEDAKSLF 275

Query: 719  D-ISANSVDHWNAMISGFACHGHGNXXXXXXXXXXXXXLKPDDITFIAVLSACSHAGMVD 543
            + +    V  W  M+ G+A  G  +                D + + ++++         
Sbjct: 276  NKMPKRDVVTWATMVDGYAKLGFVHQAKSLFDRMPLR----DVVAYNSMITGYVQNRYHK 331

Query: 542  EGLMCFERMQKEHGLEPKVQHYGCMVDILSRAGKLEEALGL 420
            E +  F  M+KE  L P       ++  +++ G+L +A+ +
Sbjct: 332  EAIGIFNDMEKESHLSPDETTLVIVLSAIAQLGRLSKAVDI 372



 Score = 61.2 bits (147), Expect = 7e-07
 Identities = 61/255 (23%), Positives = 108/255 (42%), Gaps = 34/255 (13%)
 Frame = -1

Query: 1010 KDLITWNTMMDGYVKNGLSREALNLFANMRGKDNAAPDNTTLAIVLTALTELGRINDGIS 831
            +D   WN ++  +      R+AL LF  M  +   + D  +L++VL A + LG + +G+ 
Sbjct: 84   EDPFLWNAVIKSHSHGLDPRKALLLFCLML-ETGVSVDKFSLSLVLKACSRLGFVKEGMQ 142

Query: 830  IHEYIKRSNLSMDGNLGVALIDMYSKCGRLDDALKVFD-------ISANS---------- 702
            IH +++++ +  D  L   LI +Y KCG L  A +VFD       +S NS          
Sbjct: 143  IHGFLRKTGIWSDLYLQNCLIGLYIKCGCLGYARQVFDRMPRRDSVSYNSMIDGYVKCGM 202

Query: 701  -----------------VDHWNAMISGFACHGHGNXXXXXXXXXXXXXLKPDDITFIAVL 573
                             +  WN MISG+A    G               + D I++ +++
Sbjct: 203  IESARGLFDLMPKEKKNLISWNFMISGYAQRADG---VNVAKKLFDEMPEKDLISWNSLI 259

Query: 572  SACSHAGMVDEGLMCFERMQKEHGLEPKVQHYGCMVDILSRAGKLEEALGLIRSMPMEPN 393
                  G +++    F +M K       V  +  MVD  ++ G + +A  L   MP+  +
Sbjct: 260  DGYVKHGRMEDAKSLFNKMPKR-----DVVTWATMVDGYAKLGFVHQAKSLFDRMPLR-D 313

Query: 392  DVVWRSLLSACRNHR 348
             V + S+++    +R
Sbjct: 314  VVAYNSMITGYVQNR 328


>gb|AEN99827.1| chlororespiratory reduction 4, partial [Aethionema grandiflorum]
          Length = 594

 Score =  335 bits (860), Expect = 2e-89
 Identities = 160/342 (46%), Positives = 230/342 (67%), Gaps = 1/342 (0%)
 Frame = -1

Query: 1148 GRVVDAEDMFEKMPERDVISCTTMINGYMGLGRIDYAKKLFEAMAEKDLITWNTMMDGYV 969
            GR+ DA+ +F+ MP RDV++  TMI+GY  LG + +AK LF+ M ++D++  N+MM GYV
Sbjct: 246  GRIEDAKGLFDVMPRRDVVTWATMIDGYAKLGFVHHAKSLFDQMHQRDVVACNSMMAGYV 305

Query: 968  KNGLSREALNLFANMRGKDNAAPDNTTLAIVLTALTELGRINDGISIHEYIKRSNLSMDG 789
            +N    EAL +F +M    + +PD TTL IVL+A+ +LGR++  +S+H YI      + G
Sbjct: 306  QNKYHMEALEIFNDMEKDSHLSPDETTLVIVLSAIAQLGRLSKAMSMHVYIVEKRFPLGG 365

Query: 788  NLGVALIDMYSKCGRLDDALKVFD-ISANSVDHWNAMISGFACHGHGNXXXXXXXXXXXX 612
             LGVALIDM+SKCG +  A+ VF+ I   S+DHWNAMI G A HG G             
Sbjct: 366  KLGVALIDMHSKCGSIQHAISVFEGIENKSIDHWNAMIGGLAIHGLGELAFDMLMQIERC 425

Query: 611  XLKPDDITFIAVLSACSHAGMVDEGLMCFERMQKEHGLEPKVQHYGCMVDILSRAGKLEE 432
             ++PD ITFI VL+ACSH+G+V EGL+CFE M+++H +EP++QHYGC+VD+LSR+G +E 
Sbjct: 426  SIQPDXITFIGVLNACSHSGLVKEGLLCFELMRRKHXIEPRLQHYGCLVDVLSRSGSIEL 485

Query: 431  ALGLIRSMPMEPNDVVWRSLLSACRNHRDLDMGQKLVQCLTGERIWXXXXXXXXXXXYAG 252
            A  LI  MPMEPNDV+WRS LSAC  H + + G+ + + L  +  +           YA 
Sbjct: 486  AKHLIEDMPMEPNDVIWRSFLSACSTHEEFETGELVAKHLILQAGYNPSSYVLLSNMYAS 545

Query: 251  VGLWGDAWKLRMLMREKNMKKLPGCSSIEVDGKVYEFVVGDQ 126
            +G+W D  ++RM+M+++ + K+PGCS IE+DG V+EF V D+
Sbjct: 546  LGMWKDVRRVRMMMKQRKLHKIPGCSWIELDGNVHEFFVQDK 587



 Score = 86.3 bits (212), Expect = 2e-14
 Identities = 74/274 (27%), Positives = 134/274 (48%), Gaps = 7/274 (2%)
 Frame = -1

Query: 1151 CGRVVDAEDMFEKMPERDVISCTTMINGYMGLGRIDYAKKLFEAMAE--KDLITWNTMMD 978
            CG +  A  +F++MP+RD +S  +MI+GY+  G +  A KLF+ M    K+LI+WN+M+ 
Sbjct: 149  CGCLGFARQVFDRMPQRDSVSYNSMIDGYVKCGLMKSAHKLFDLMPREIKNLISWNSMIS 208

Query: 977  GYVK--NGLSREALNLFANMRGKDNAAPDNTTLAIVLTALTELGRINDGISIHEYIKRSN 804
            GY +  +GL+  A  LF+ M  KD  + ++     ++    + GRI D   + + + R  
Sbjct: 209  GYAQTADGLN-TASKLFSEMPEKDLISWNS-----MINGCVKHGRIEDAKGLFDVMPR-- 260

Query: 803  LSMDGNLGVALIDMYSKCGRLDDALKVFD-ISANSVDHWNAMISGFACHG-HGNXXXXXX 630
               D      +ID Y+K G +  A  +FD +    V   N+M++G+  +  H        
Sbjct: 261  --RDVVTWATMIDGYAKLGFVHHAKSLFDQMHQRDVVACNSMMAGYVQNKYHMEALEIFN 318

Query: 629  XXXXXXXLKPDDITFIAVLSACSHAGMVDEGL-MCFERMQKEHGLEPKVQHYGCMVDILS 453
                   L PD+ T + VLSA +  G + + + M    ++K   L  K+     ++D+ S
Sbjct: 319  DMEKDSHLSPDETTLVIVLSAIAQLGRLSKAMSMHVYIVEKRFPLGGKLG--VALIDMHS 376

Query: 452  RAGKLEEALGLIRSMPMEPNDVVWRSLLSACRNH 351
            + G ++ A+ +   +  +  D  W +++     H
Sbjct: 377  KCGSIQHAISVFEGIENKSID-HWNAMIGGLAIH 409



 Score = 59.7 bits (143), Expect = 2e-06
 Identities = 59/222 (26%), Positives = 100/222 (45%), Gaps = 2/222 (0%)
 Frame = -1

Query: 1028 FEAMAEKDLITWNTMMDGYVKNGLSREALNLFANMRGKDNAAPDNTTLAIVLTALTELGR 849
            F A   +D   WN ++  Y      R AL LF  M  ++    D  +L++VL A + L  
Sbjct: 58   FSAGEGEDPYLWNAVIKSYSHGIDPRRALLLFCLMI-ENGVCVDKFSLSLVLKACSRLEF 116

Query: 848  INDGISIHEYIKRSNLSMDGNLGVALIDMYSKCGRLDDALKVFD-ISANSVDHWNAMISG 672
            + +G+ IH +++++ +  D  L   LI +Y KCG L  A +VFD +       +N+MI G
Sbjct: 117  LKEGMQIHGFLRKTGIWSDLFLQNCLIGLYLKCGCLGFARQVFDRMPQRDSVSYNSMIDG 176

Query: 671  FACHGHGNXXXXXXXXXXXXXLKPDDI-TFIAVLSACSHAGMVDEGLMCFERMQKEHGLE 495
            +   G                L P +I   I+  S  S      +GL    ++  E   E
Sbjct: 177  YVKCG------LMKSAHKLFDLMPREIKNLISWNSMISGYAQTADGLNTASKLFSEMP-E 229

Query: 494  PKVQHYGCMVDILSRAGKLEEALGLIRSMPMEPNDVVWRSLL 369
              +  +  M++   + G++E+A GL   MP   + V W +++
Sbjct: 230  KDLISWNSMINGCVKHGRIEDAKGLFDVMPRR-DVVTWATMI 270