BLASTX nr result

ID: Zingiber24_contig00033531 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00033531
         (573 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABN79278.1| WRKY53 transcription factor [Noccaea caerulescens]      64   3e-08
gb|AGA37247.1| WRKY transcription factor 53.2 [Brassica napus]         63   6e-08
gb|ACQ76808.1| WRKY transcription factor 53 [Brassica napus] gi|...    62   8e-08
ref|XP_006413515.1| hypothetical protein EUTSA_v10025724mg [Eutr...    61   2e-07
gb|ACI14402.1| WRKY53-1 transcription factor [Brassica napus]          61   2e-07
gb|AHB33850.1| WRKY transcription factor 53 [Brassica rapa]            60   3e-07
gb|ACC91249.1| WRKY family transcription factor [Arabidopsis hal...    56   6e-06
ref|XP_002867689.1| WRKY DNA-binding protein 53 [Arabidopsis lyr...    55   1e-05

>gb|ABN79278.1| WRKY53 transcription factor [Noccaea caerulescens]
          Length = 324

 Score = 63.9 bits (154), Expect = 3e-08
 Identities = 35/82 (42%), Positives = 47/82 (57%), Gaps = 4/82 (4%)
 Frame = -3

Query: 571 QRSDDDPFAIDVTYRGDHTCLQSKRPQPGAGAPPALSSEP----AEQKQQLLHSLQTSLK 404
           QRSD DP   +VTYRG HTC Q+  P P   +P    + P    A++   LL SL+T+L 
Sbjct: 199 QRSDSDPTVFEVTYRGTHTCRQAITPPPPPASPEKQDTRPTPTIAQKPNDLLESLKTNLT 258

Query: 403 VETEGFSSDDQNHNCFSFSSTP 338
           V+T G  + D   + FSF +TP
Sbjct: 259 VQTVGLDNAD---DVFSFPNTP 277


>gb|AGA37247.1| WRKY transcription factor 53.2 [Brassica napus]
          Length = 329

 Score = 62.8 bits (151), Expect = 6e-08
 Identities = 37/85 (43%), Positives = 46/85 (54%), Gaps = 7/85 (8%)
 Frame = -3

Query: 571 QRSDDDPFAIDVTYRGDHTCLQSKRP--QPGAGAPPALSSEP-----AEQKQQLLHSLQT 413
           QRSD DP   ++TYRG HTC Q   P   P   +P   ++ P     A++   LL SL+T
Sbjct: 192 QRSDSDPTVFELTYRGTHTCRQGTPPPSHPPPASPEKRNTRPKLTTTAQKPNDLLESLKT 251

Query: 412 SLKVETEGFSSDDQNHNCFSFSSTP 338
           SL V TEG    D   N FSF +TP
Sbjct: 252 SLTVRTEGLDDAD---NVFSFPNTP 273


>gb|ACQ76808.1| WRKY transcription factor 53 [Brassica napus]
           gi|430219049|gb|AGA37246.1| WRKY transcription factor
           53.1 [Brassica napus]
          Length = 316

 Score = 62.4 bits (150), Expect = 8e-08
 Identities = 36/85 (42%), Positives = 45/85 (52%), Gaps = 7/85 (8%)
 Frame = -3

Query: 571 QRSDDDPFAIDVTYRGDHTCLQSKRP--QPGAGAPPALSSEP-----AEQKQQLLHSLQT 413
           QRSD DP   ++TYRG HTC Q   P   P   +P   S+ P      ++   +L SL+T
Sbjct: 192 QRSDSDPTVFELTYRGTHTCQQGTPPPSHPSPASPEKRSTRPKLTTTTQKPNDILESLKT 251

Query: 412 SLKVETEGFSSDDQNHNCFSFSSTP 338
           SL V TEG    D   N FSF +TP
Sbjct: 252 SLTVRTEGLDDAD---NVFSFPNTP 273


>ref|XP_006413515.1| hypothetical protein EUTSA_v10025724mg [Eutrema salsugineum]
           gi|557114685|gb|ESQ54968.1| hypothetical protein
           EUTSA_v10025724mg [Eutrema salsugineum]
          Length = 323

 Score = 61.2 bits (147), Expect = 2e-07
 Identities = 37/87 (42%), Positives = 46/87 (52%), Gaps = 9/87 (10%)
 Frame = -3

Query: 571 QRSDDDPFAIDVTYRGDHTCLQSKRPQPGAGAPPALSSEPAEQK---------QQLLHSL 419
           QRSD DP   +VTYRG HTC Q+  P P    PP  S E  + +          +LL SL
Sbjct: 197 QRSDGDPSVFEVTYRGTHTCSQAITPPP----PPPASPEKRDTRPKPTITRKPNELLESL 252

Query: 418 QTSLKVETEGFSSDDQNHNCFSFSSTP 338
           +TSL V T+G    D+    FSF +TP
Sbjct: 253 KTSLTVRTDGL---DEGDGVFSFPNTP 276


>gb|ACI14402.1| WRKY53-1 transcription factor [Brassica napus]
          Length = 321

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 36/85 (42%), Positives = 46/85 (54%), Gaps = 7/85 (8%)
 Frame = -3

Query: 571 QRSDDDPFAIDVTYRGDHTCLQSKRP--QPGAGAPPALSSEP-----AEQKQQLLHSLQT 413
           QRSD DP   ++TYRG HTC Q   P   P   +P   ++ P     A++   LL SL+T
Sbjct: 192 QRSDSDPTVFELTYRGTHTCRQGTPPPSHPPPASPEKRNTRPKLTTTAQKPNDLLESLKT 251

Query: 412 SLKVETEGFSSDDQNHNCFSFSSTP 338
           SL V TEG    D   + FSF +TP
Sbjct: 252 SLTVRTEGLDDAD---DVFSFPNTP 273


>gb|AHB33850.1| WRKY transcription factor 53 [Brassica rapa]
          Length = 323

 Score = 60.5 bits (145), Expect = 3e-07
 Identities = 35/83 (42%), Positives = 45/83 (54%), Gaps = 5/83 (6%)
 Frame = -3

Query: 571 QRSDDDPFAIDVTYRGDHTCLQSKRPQPGAGAPP-----ALSSEPAEQKQQLLHSLQTSL 407
           QRSD+DP   +VTYRG HTC ++    P   A P         + A+   +LL SL+TSL
Sbjct: 196 QRSDNDPTVFEVTYRGTHTCSRATAAAPPPPASPEKQDTRTKPQIAQTPNELLESLKTSL 255

Query: 406 KVETEGFSSDDQNHNCFSFSSTP 338
            V TEG    D   + FSF +TP
Sbjct: 256 TVRTEGL---DDGEDVFSFPNTP 275


>gb|ACC91249.1| WRKY family transcription factor [Arabidopsis halleri]
          Length = 326

 Score = 56.2 bits (134), Expect = 6e-06
 Identities = 34/88 (38%), Positives = 46/88 (52%), Gaps = 10/88 (11%)
 Frame = -3

Query: 571 QRSDDDPFAIDVTYRGDHTCLQSKRPQPGAGAP----------PALSSEPAEQKQQLLHS 422
           QRSD D    +VTYRG HTC Q+  P P   +P          PA++ +P    + LL S
Sbjct: 198 QRSDGDATVFEVTYRGTHTCSQAITPPPPPASPEKKQEDTRVGPAITQKP----KDLLES 253

Query: 421 LQTSLKVETEGFSSDDQNHNCFSFSSTP 338
           L+++L V T+G    D   + FSF  TP
Sbjct: 254 LKSNLTVRTDGL---DDGKDVFSFPDTP 278


>ref|XP_002867689.1| WRKY DNA-binding protein 53 [Arabidopsis lyrata subsp. lyrata]
           gi|297313525|gb|EFH43948.1| WRKY DNA-binding protein 53
           [Arabidopsis lyrata subsp. lyrata]
          Length = 326

 Score = 55.5 bits (132), Expect = 1e-05
 Identities = 34/88 (38%), Positives = 45/88 (51%), Gaps = 10/88 (11%)
 Frame = -3

Query: 571 QRSDDDPFAIDVTYRGDHTCLQSKRPQPGAGAP----------PALSSEPAEQKQQLLHS 422
           QRSD D    +VTYRG HTC Q   P P   +P          PA++ +P    + LL S
Sbjct: 198 QRSDSDATVFEVTYRGTHTCSQVITPPPPPASPEKKQEDTRVRPAITQKP----KDLLES 253

Query: 421 LQTSLKVETEGFSSDDQNHNCFSFSSTP 338
           L+++L V T+G    D   + FSF  TP
Sbjct: 254 LKSNLTVRTDGL---DDGKDVFSFPDTP 278


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