BLASTX nr result

ID: Zingiber24_contig00033378 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00033378
         (498 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004970766.1| PREDICTED: RNA-binding protein 24-B-like iso...    63   4e-08
dbj|BAD81881.1| putative RRM-containing protein SEB-4 [Oryza sat...    63   4e-08
ref|XP_006645107.1| PREDICTED: RNA-binding protein 24-B-like iso...    62   6e-08
tpg|DAA56565.1| TPA: hypothetical protein ZEAMMB73_877814 [Zea m...    62   8e-08
gb|EMS52416.1| RNA-binding protein 24-B [Triticum urartu]              62   1e-07
ref|XP_003564757.1| PREDICTED: uncharacterized protein LOC100841...    60   4e-07

>ref|XP_004970766.1| PREDICTED: RNA-binding protein 24-B-like isoform X1 [Setaria
           italica]
          Length = 294

 Score = 63.2 bits (152), Expect = 4e-08
 Identities = 33/68 (48%), Positives = 45/68 (66%), Gaps = 5/68 (7%)
 Frame = +2

Query: 2   ASTPTGITAFGQHFGAGPLPIAATSTAQSG---GITTTLPPSPT--GYPYRLVPAHFSAS 166
           +ST   +T F Q FG GPL +AA+  AQ+G    +T    P+PT   +PYRL+P+HF+ S
Sbjct: 228 SSTAAAVTGFAQQFG-GPLSLAASPQAQAGMTMALTAPTLPTPTQAAHPYRLIPSHFAVS 286

Query: 167 TAPQQPLA 190
            AP+QPLA
Sbjct: 287 AAPEQPLA 294


>dbj|BAD81881.1| putative RRM-containing protein SEB-4 [Oryza sativa Japonica Group]
           gi|56784856|dbj|BAD82096.1| putative RRM-containing
           protein SEB-4 [Oryza sativa Japonica Group]
           gi|125528575|gb|EAY76689.1| hypothetical protein
           OsI_04643 [Oryza sativa Indica Group]
           gi|125572838|gb|EAZ14353.1| hypothetical protein
           OsJ_04273 [Oryza sativa Japonica Group]
          Length = 300

 Score = 63.2 bits (152), Expect = 4e-08
 Identities = 33/68 (48%), Positives = 45/68 (66%), Gaps = 5/68 (7%)
 Frame = +2

Query: 2   ASTPTGITAFGQHFGAGPLPIAATSTAQSG---GITTTLPPSPT--GYPYRLVPAHFSAS 166
           AST   +T F Q +G GPL +AA+  AQ+G    +T    P+PT   +PYRL+P+HF+ S
Sbjct: 234 ASTAAAVTGFAQQYG-GPLSLAASPQAQAGMTMALTAPTLPTPTQAAHPYRLIPSHFAVS 292

Query: 167 TAPQQPLA 190
            AP+QPLA
Sbjct: 293 AAPEQPLA 300


>ref|XP_006645107.1| PREDICTED: RNA-binding protein 24-B-like isoform X1 [Oryza
           brachyantha]
          Length = 298

 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 33/68 (48%), Positives = 45/68 (66%), Gaps = 5/68 (7%)
 Frame = +2

Query: 2   ASTPTGITAFGQHFGAGPLPIAATSTAQSG---GITTTLPPSPTG--YPYRLVPAHFSAS 166
           AST   +T F Q +G GPL +AA+  AQ+G    +T    P+PT   +PYRL+P+HF+ S
Sbjct: 232 ASTAAAVTGFAQQYG-GPLSLAASPQAQAGMTMALTAPTLPTPTQATHPYRLIPSHFAVS 290

Query: 167 TAPQQPLA 190
            AP+QPLA
Sbjct: 291 AAPEQPLA 298


>tpg|DAA56565.1| TPA: hypothetical protein ZEAMMB73_877814 [Zea mays]
          Length = 295

 Score = 62.0 bits (149), Expect = 8e-08
 Identities = 32/68 (47%), Positives = 45/68 (66%), Gaps = 5/68 (7%)
 Frame = +2

Query: 2   ASTPTGITAFGQHFGAGPLPIAATSTAQSG---GITTTLPPSPT--GYPYRLVPAHFSAS 166
           +ST   +T F Q +G GPL +AA+  AQ+G    +T    P+PT   +PYRL+P+HF+ S
Sbjct: 229 SSTAAAVTGFAQQYG-GPLSLAASPQAQAGMTMALTAPTLPTPTQAAHPYRLIPSHFAVS 287

Query: 167 TAPQQPLA 190
            AP+QPLA
Sbjct: 288 AAPEQPLA 295


>gb|EMS52416.1| RNA-binding protein 24-B [Triticum urartu]
          Length = 297

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 34/68 (50%), Positives = 44/68 (64%), Gaps = 5/68 (7%)
 Frame = +2

Query: 2   ASTPTGITAFGQHFGAGPLPIAATSTAQSG---GITTTLPPSPT--GYPYRLVPAHFSAS 166
           AST   +T F Q +G GPL +AA+  AQ+G    +T    PSPT   +PYRLVP+HF+ S
Sbjct: 231 ASTAAAVTGFAQQYG-GPLSLAASPQAQAGMTMALTAPTLPSPTQAAHPYRLVPSHFAVS 289

Query: 167 TAPQQPLA 190
            AP+Q LA
Sbjct: 290 AAPEQSLA 297


>ref|XP_003564757.1| PREDICTED: uncharacterized protein LOC100841513 isoform 2
           [Brachypodium distachyon]
          Length = 293

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 33/68 (48%), Positives = 45/68 (66%), Gaps = 5/68 (7%)
 Frame = +2

Query: 2   ASTPTGITAFGQHFGAGPLPIAATSTAQSG---GITT-TLP-PSPTGYPYRLVPAHFSAS 166
           ASTP  +T F   +G GPL +AA+  AQ+G    +T  TLP P+P  +PYRL+ +HF+ S
Sbjct: 227 ASTPAAVTGFAPQYG-GPLSLAASPQAQAGMTMALTAPTLPSPTPAAHPYRLITSHFAVS 285

Query: 167 TAPQQPLA 190
            AP+Q LA
Sbjct: 286 AAPEQSLA 293


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