BLASTX nr result

ID: Zingiber24_contig00033362 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00033362
         (464 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002441381.1| hypothetical protein SORBIDRAFT_09g025601 [S...    56   6e-06

>ref|XP_002441381.1| hypothetical protein SORBIDRAFT_09g025601 [Sorghum bicolor]
           gi|241946666|gb|EES19811.1| hypothetical protein
           SORBIDRAFT_09g025601 [Sorghum bicolor]
          Length = 140

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 34/90 (37%), Positives = 51/90 (56%), Gaps = 11/90 (12%)
 Frame = -1

Query: 425 SSFLGGCIDPHSFL---LRPDQSRFDLLTREEDLETRQ--RINWVSILIKRLMKKGRSIC 261
           SS+  GC+   ++L   +R   +RF LL R +D   R   R  W  +L +RL+++ +SI 
Sbjct: 18  SSYFSGCMSSPAWLPPGVRRSPARFQLLARGDDAAGRGGGRRAWRGLL-RRLVRESKSIV 76

Query: 260 CSKPLR------LGYDEESYSKNFDDGQWN 189
           CS   R        YD +SY+KNFDDG+W+
Sbjct: 77  CSNACRAPVAATFKYDADSYAKNFDDGRWH 106


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