BLASTX nr result
ID: Zingiber24_contig00033225
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00033225
(612 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002300042.2| hypothetical protein POPTR_0001s35070g [Popu... 103 5e-20
ref|XP_002273777.2| PREDICTED: polyribonucleotide nucleotidyltra... 102 8e-20
emb|CBI34890.3| unnamed protein product [Vitis vinifera] 102 8e-20
ref|XP_004304642.1| PREDICTED: polyribonucleotide nucleotidyltra... 100 3e-19
gb|EOY02464.1| Polyribonucleotide nucleotidyltransferase, putati... 100 4e-19
ref|XP_002524669.1| polyribonucleotide nucleotidyltransferase, p... 99 7e-19
ref|XP_004489245.1| PREDICTED: polyribonucleotide nucleotidyltra... 99 9e-19
ref|XP_002454178.1| hypothetical protein SORBIDRAFT_04g026110 [S... 99 9e-19
gb|EMJ18896.1| hypothetical protein PRUPE_ppa000918mg [Prunus pe... 98 2e-18
gb|ESW23003.1| hypothetical protein PHAVU_004G011100g [Phaseolus... 98 2e-18
gb|AFW72337.1| hypothetical protein ZEAMMB73_632002 [Zea mays] 97 3e-18
ref|NP_001146202.1| uncharacterized protein LOC100279772 [Zea ma... 97 3e-18
ref|XP_006648841.1| PREDICTED: polyribonucleotide nucleotidyltra... 97 3e-18
ref|XP_006338583.1| PREDICTED: polyribonucleotide nucleotidyltra... 97 3e-18
sp|Q6KAI0.1|PNP2_ORYSJ RecName: Full=Polyribonucleotide nucleoti... 97 3e-18
gb|EEE57382.1| hypothetical protein OsJ_07542 [Oryza sativa Japo... 97 3e-18
gb|EEC73607.1| hypothetical protein OsI_08089 [Oryza sativa Indi... 97 3e-18
ref|NP_001047444.1| Os02g0617700 [Oryza sativa Japonica Group] g... 97 3e-18
gb|EOY02463.1| Polyribonucleotide nucleotidyltransferase, putati... 96 6e-18
ref|XP_006470281.1| PREDICTED: polyribonucleotide nucleotidyltra... 96 8e-18
>ref|XP_002300042.2| hypothetical protein POPTR_0001s35070g [Populus trichocarpa]
gi|550348918|gb|EEE84847.2| hypothetical protein
POPTR_0001s35070g [Populus trichocarpa]
Length = 961
Score = 103 bits (256), Expect = 5e-20
Identities = 49/87 (56%), Positives = 65/87 (74%)
Frame = +3
Query: 3 VSHADDGDSKSKPSAQAQSLKIGDRLPAKVYQIRTHGLVLELSGGTRGMYKFEVNGRRDF 182
V +D D+K A+SLK+G ++ AKVYQIR GLVL+L G RGMY+FE NG+RDF
Sbjct: 875 VDRLNDEDAKVVSPLSAKSLKLGMKIAAKVYQIRALGLVLDLGNGVRGMYRFETNGKRDF 934
Query: 183 EVGKELQVRCSSFSTKGIPVFSLSENE 263
E+G EL V+C+SFS+KG+PV SL ++E
Sbjct: 935 EIGDELLVKCTSFSSKGLPVMSLVDDE 961
>ref|XP_002273777.2| PREDICTED: polyribonucleotide nucleotidyltransferase-like [Vitis
vinifera]
Length = 964
Score = 102 bits (254), Expect = 8e-20
Identities = 56/89 (62%), Positives = 66/89 (74%), Gaps = 3/89 (3%)
Frame = +3
Query: 6 SHADDGDSKSKPSA--QAQSLKIGDRLPAKVYQIRTHGLVLELSGGTRGMYKFE-VNGRR 176
S D D+K P A++LK+G +L AKVYQIRTHGLVL+L GG RGMY+FE N +R
Sbjct: 876 SQNDLNDTKEVPETCTGAKNLKLGMKLNAKVYQIRTHGLVLDLGGGIRGMYRFEGDNDKR 935
Query: 177 DFEVGKELQVRCSSFSTKGIPVFSLSENE 263
DF+VG EL V CSSFSTKGIPV SL E+E
Sbjct: 936 DFKVGDELHVMCSSFSTKGIPVMSLVEDE 964
>emb|CBI34890.3| unnamed protein product [Vitis vinifera]
Length = 905
Score = 102 bits (254), Expect = 8e-20
Identities = 56/89 (62%), Positives = 66/89 (74%), Gaps = 3/89 (3%)
Frame = +3
Query: 6 SHADDGDSKSKPSA--QAQSLKIGDRLPAKVYQIRTHGLVLELSGGTRGMYKFE-VNGRR 176
S D D+K P A++LK+G +L AKVYQIRTHGLVL+L GG RGMY+FE N +R
Sbjct: 817 SQNDLNDTKEVPETCTGAKNLKLGMKLNAKVYQIRTHGLVLDLGGGIRGMYRFEGDNDKR 876
Query: 177 DFEVGKELQVRCSSFSTKGIPVFSLSENE 263
DF+VG EL V CSSFSTKGIPV SL E+E
Sbjct: 877 DFKVGDELHVMCSSFSTKGIPVMSLVEDE 905
>ref|XP_004304642.1| PREDICTED: polyribonucleotide nucleotidyltransferase 2,
mitochondrial-like [Fragaria vesca subsp. vesca]
Length = 969
Score = 100 bits (249), Expect = 3e-19
Identities = 47/86 (54%), Positives = 65/86 (75%)
Frame = +3
Query: 6 SHADDGDSKSKPSAQAQSLKIGDRLPAKVYQIRTHGLVLELSGGTRGMYKFEVNGRRDFE 185
+H+ + S + A+SLK+G ++ AKVYQ+RT GLVL+L GG RGMY+FE +G++DF+
Sbjct: 884 THSSNDLSSKEDYVTARSLKLGTKVTAKVYQVRTGGLVLDLGGGLRGMYRFEADGKKDFD 943
Query: 186 VGKELQVRCSSFSTKGIPVFSLSENE 263
V ELQV C SFS+KGIPV SL ++E
Sbjct: 944 VNDELQVECVSFSSKGIPVMSLVDDE 969
>gb|EOY02464.1| Polyribonucleotide nucleotidyltransferase, putative isoform 2
[Theobroma cacao]
Length = 896
Score = 100 bits (248), Expect = 4e-19
Identities = 48/87 (55%), Positives = 62/87 (71%)
Frame = +3
Query: 3 VSHADDGDSKSKPSAQAQSLKIGDRLPAKVYQIRTHGLVLELSGGTRGMYKFEVNGRRDF 182
+S+ D ++ K Q LK+G ++ AKVYQIR GLVL+L GG RGMY+FE NG +DF
Sbjct: 810 LSNQKDKETDDKTPMTPQKLKLGTKVTAKVYQIRARGLVLDLGGGIRGMYRFEPNGEKDF 869
Query: 183 EVGKELQVRCSSFSTKGIPVFSLSENE 263
VG EL V+CSSF++KGIPV SL + E
Sbjct: 870 NVGDELPVQCSSFTSKGIPVMSLVDEE 896
>ref|XP_002524669.1| polyribonucleotide nucleotidyltransferase, putative [Ricinus
communis] gi|223536030|gb|EEF37688.1| polyribonucleotide
nucleotidyltransferase, putative [Ricinus communis]
Length = 958
Score = 99.4 bits (246), Expect = 7e-19
Identities = 45/71 (63%), Positives = 61/71 (85%)
Frame = +3
Query: 51 AQSLKIGDRLPAKVYQIRTHGLVLELSGGTRGMYKFEVNGRRDFEVGKELQVRCSSFSTK 230
A++LK+G ++ AKVYQIR HGLVL+L G RGM++FE NG+RDFEVG EL+V+C++FS+K
Sbjct: 888 ARNLKLGTKVAAKVYQIRKHGLVLDLGGEVRGMFRFEENGKRDFEVGDELRVKCTNFSSK 947
Query: 231 GIPVFSLSENE 263
GIPV SL ++E
Sbjct: 948 GIPVMSLVDDE 958
>ref|XP_004489245.1| PREDICTED: polyribonucleotide nucleotidyltransferase 2,
mitochondrial-like [Cicer arietinum]
Length = 976
Score = 99.0 bits (245), Expect = 9e-19
Identities = 44/81 (54%), Positives = 62/81 (76%)
Frame = +3
Query: 6 SHADDGDSKSKPSAQAQSLKIGDRLPAKVYQIRTHGLVLELSGGTRGMYKFEVNGRRDFE 185
+ D+ + K+K A+ LK+G + AKVYQIR HGLVL+L GG RGMY++E +G++DF+
Sbjct: 889 AEGDEKEGKNKTPLTAKDLKLGTEVTAKVYQIRAHGLVLDLGGGVRGMYRYEEDGKKDFK 948
Query: 186 VGKELQVRCSSFSTKGIPVFS 248
+G E++V CSSFS+KGIPV S
Sbjct: 949 IGDEMRVVCSSFSSKGIPVLS 969
>ref|XP_002454178.1| hypothetical protein SORBIDRAFT_04g026110 [Sorghum bicolor]
gi|241934009|gb|EES07154.1| hypothetical protein
SORBIDRAFT_04g026110 [Sorghum bicolor]
Length = 983
Score = 99.0 bits (245), Expect = 9e-19
Identities = 47/75 (62%), Positives = 62/75 (82%)
Frame = +3
Query: 27 SKSKPSAQAQSLKIGDRLPAKVYQIRTHGLVLELSGGTRGMYKFEVNGRRDFEVGKELQV 206
++S + Q+ ++K+GD + AKVYQIR GLVLELS G RGM+KFE NG+++FEVG+EL V
Sbjct: 907 NQSPTNFQSGAMKLGDVVTAKVYQIRAFGLVLELSDGARGMHKFEANGQKEFEVGQELLV 966
Query: 207 RCSSFSTKGIPVFSL 251
+CSSF+ KGIPVFSL
Sbjct: 967 KCSSFNAKGIPVFSL 981
>gb|EMJ18896.1| hypothetical protein PRUPE_ppa000918mg [Prunus persica]
Length = 962
Score = 98.2 bits (243), Expect = 2e-18
Identities = 49/83 (59%), Positives = 64/83 (77%), Gaps = 1/83 (1%)
Frame = +3
Query: 18 DGD-SKSKPSAQAQSLKIGDRLPAKVYQIRTHGLVLELSGGTRGMYKFEVNGRRDFEVGK 194
+GD ++ + A++LKIG ++ AKVYQIRT GLVL+L GG RGMY+FE NG+ DFEV
Sbjct: 880 EGDKTEVRSPVTAKTLKIGTKVTAKVYQIRTGGLVLDLGGGIRGMYRFETNGKNDFEVDD 939
Query: 195 ELQVRCSSFSTKGIPVFSLSENE 263
EL+V C SFS+KGIPV SL ++E
Sbjct: 940 ELRVVCVSFSSKGIPVMSLEDDE 962
>gb|ESW23003.1| hypothetical protein PHAVU_004G011100g [Phaseolus vulgaris]
Length = 982
Score = 97.8 bits (242), Expect = 2e-18
Identities = 44/81 (54%), Positives = 61/81 (75%)
Frame = +3
Query: 15 DDGDSKSKPSAQAQSLKIGDRLPAKVYQIRTHGLVLELSGGTRGMYKFEVNGRRDFEVGK 194
D+ +SK K S A+ L++G ++ AKVYQIR HGLVL+L G RGMY+FE N R+F++G
Sbjct: 901 DEQESKDKASGTAKDLELGTKVTAKVYQIRAHGLVLDLGSGLRGMYRFEENNSRNFKIGD 960
Query: 195 ELQVRCSSFSTKGIPVFSLSE 257
E++V CSSFS+KGIP+ S +
Sbjct: 961 EMRVVCSSFSSKGIPILSFDD 981
>gb|AFW72337.1| hypothetical protein ZEAMMB73_632002 [Zea mays]
Length = 980
Score = 97.4 bits (241), Expect = 3e-18
Identities = 46/75 (61%), Positives = 61/75 (81%)
Frame = +3
Query: 27 SKSKPSAQAQSLKIGDRLPAKVYQIRTHGLVLELSGGTRGMYKFEVNGRRDFEVGKELQV 206
++S Q+ ++K+GD + AKVYQIR +GLVLELS G RGM+KFE NG ++FEVG+EL V
Sbjct: 904 NQSPTKFQSGAMKLGDVVTAKVYQIRAYGLVLELSDGVRGMHKFEANGLKEFEVGQELVV 963
Query: 207 RCSSFSTKGIPVFSL 251
+CSSF+ KGIP+FSL
Sbjct: 964 KCSSFNAKGIPLFSL 978
>ref|NP_001146202.1| uncharacterized protein LOC100279772 [Zea mays]
gi|219886165|gb|ACL53457.1| unknown [Zea mays]
Length = 733
Score = 97.4 bits (241), Expect = 3e-18
Identities = 46/75 (61%), Positives = 61/75 (81%)
Frame = +3
Query: 27 SKSKPSAQAQSLKIGDRLPAKVYQIRTHGLVLELSGGTRGMYKFEVNGRRDFEVGKELQV 206
++S Q+ ++K+GD + AKVYQIR +GLVLELS G RGM+KFE NG ++FEVG+EL V
Sbjct: 657 NQSPTKFQSGAMKLGDVVTAKVYQIRAYGLVLELSDGVRGMHKFEANGLKEFEVGQELVV 716
Query: 207 RCSSFSTKGIPVFSL 251
+CSSF+ KGIP+FSL
Sbjct: 717 KCSSFNAKGIPLFSL 731
>ref|XP_006648841.1| PREDICTED: polyribonucleotide nucleotidyltransferase 2,
mitochondrial-like, partial [Oryza brachyantha]
Length = 947
Score = 97.1 bits (240), Expect = 3e-18
Identities = 47/73 (64%), Positives = 60/73 (82%)
Frame = +3
Query: 33 SKPSAQAQSLKIGDRLPAKVYQIRTHGLVLELSGGTRGMYKFEVNGRRDFEVGKELQVRC 212
S + ++ S+K+GD + AKVYQIR +GLVLELS G RGM+KFE NGR FEVG+EL V+C
Sbjct: 873 SPSNFRSGSMKLGDVVTAKVYQIRAYGLVLELSDGVRGMHKFEENGRNTFEVGQELLVKC 932
Query: 213 SSFSTKGIPVFSL 251
+SF++KGIPVFSL
Sbjct: 933 ASFNSKGIPVFSL 945
>ref|XP_006338583.1| PREDICTED: polyribonucleotide nucleotidyltransferase 2,
mitochondrial-like [Solanum tuberosum]
Length = 977
Score = 97.1 bits (240), Expect = 3e-18
Identities = 51/85 (60%), Positives = 62/85 (72%)
Frame = +3
Query: 9 HADDGDSKSKPSAQAQSLKIGDRLPAKVYQIRTHGLVLELSGGTRGMYKFEVNGRRDFEV 188
H+ G K+ SA LK+G R+ AKV+QIR GLVL+L GG RGMY+FE +RDFEV
Sbjct: 895 HSQIGSDKAPMSAN--KLKLGMRVTAKVHQIRALGLVLDLGGGIRGMYRFEPGMKRDFEV 952
Query: 189 GKELQVRCSSFSTKGIPVFSLSENE 263
G EL+V+CSSFSTKGIPV SL + E
Sbjct: 953 GDELRVKCSSFSTKGIPVLSLVKEE 977
>sp|Q6KAI0.1|PNP2_ORYSJ RecName: Full=Polyribonucleotide nucleotidyltransferase 2,
mitochondrial; AltName: Full=Polynucleotide phosphorylase
2; Short=PNPase 2; Flags: Precursor
gi|47847669|dbj|BAD21450.1| putative polyribonucleotide
nucleotidyltransferase [Oryza sativa Japonica Group]
Length = 982
Score = 97.1 bits (240), Expect = 3e-18
Identities = 47/73 (64%), Positives = 59/73 (80%)
Frame = +3
Query: 33 SKPSAQAQSLKIGDRLPAKVYQIRTHGLVLELSGGTRGMYKFEVNGRRDFEVGKELQVRC 212
S + ++ S+K+GD + AKVYQIR +GLVLELS G RGM+KF NG +DFEVG+EL V+C
Sbjct: 908 SPSNFRSGSMKLGDVVTAKVYQIRAYGLVLELSDGVRGMHKFAENGHKDFEVGEELLVKC 967
Query: 213 SSFSTKGIPVFSL 251
SSF+ KGIPVFSL
Sbjct: 968 SSFNAKGIPVFSL 980
>gb|EEE57382.1| hypothetical protein OsJ_07542 [Oryza sativa Japonica Group]
Length = 941
Score = 97.1 bits (240), Expect = 3e-18
Identities = 47/73 (64%), Positives = 59/73 (80%)
Frame = +3
Query: 33 SKPSAQAQSLKIGDRLPAKVYQIRTHGLVLELSGGTRGMYKFEVNGRRDFEVGKELQVRC 212
S + ++ S+K+GD + AKVYQIR +GLVLELS G RGM+KF NG +DFEVG+EL V+C
Sbjct: 867 SPSNFRSGSMKLGDVVTAKVYQIRAYGLVLELSDGVRGMHKFAENGHKDFEVGEELLVKC 926
Query: 213 SSFSTKGIPVFSL 251
SSF+ KGIPVFSL
Sbjct: 927 SSFNAKGIPVFSL 939
>gb|EEC73607.1| hypothetical protein OsI_08089 [Oryza sativa Indica Group]
Length = 1030
Score = 97.1 bits (240), Expect = 3e-18
Identities = 47/73 (64%), Positives = 59/73 (80%)
Frame = +3
Query: 33 SKPSAQAQSLKIGDRLPAKVYQIRTHGLVLELSGGTRGMYKFEVNGRRDFEVGKELQVRC 212
S + ++ S+K+GD + AKVYQIR +GLVLELS G RGM+KF NG +DFEVG+EL V+C
Sbjct: 956 SPSNFRSGSMKLGDVVTAKVYQIRAYGLVLELSDGVRGMHKFAENGHKDFEVGEELLVKC 1015
Query: 213 SSFSTKGIPVFSL 251
SSF+ KGIPVFSL
Sbjct: 1016 SSFNAKGIPVFSL 1028
>ref|NP_001047444.1| Os02g0617700 [Oryza sativa Japonica Group]
gi|113536975|dbj|BAF09358.1| Os02g0617700, partial
[Oryza sativa Japonica Group]
Length = 322
Score = 97.1 bits (240), Expect = 3e-18
Identities = 47/73 (64%), Positives = 59/73 (80%)
Frame = +3
Query: 33 SKPSAQAQSLKIGDRLPAKVYQIRTHGLVLELSGGTRGMYKFEVNGRRDFEVGKELQVRC 212
S + ++ S+K+GD + AKVYQIR +GLVLELS G RGM+KF NG +DFEVG+EL V+C
Sbjct: 248 SPSNFRSGSMKLGDVVTAKVYQIRAYGLVLELSDGVRGMHKFAENGHKDFEVGEELLVKC 307
Query: 213 SSFSTKGIPVFSL 251
SSF+ KGIPVFSL
Sbjct: 308 SSFNAKGIPVFSL 320
>gb|EOY02463.1| Polyribonucleotide nucleotidyltransferase, putative isoform 1
[Theobroma cacao]
Length = 980
Score = 96.3 bits (238), Expect = 6e-18
Identities = 48/89 (53%), Positives = 63/89 (70%), Gaps = 2/89 (2%)
Frame = +3
Query: 3 VSHADDGDSKSKPSAQAQSLKIGDRLPAKVYQIRTHGLVLELSGGTRGMYKFEV--NGRR 176
+S+ D ++ K Q LK+G ++ AKVYQIR GLVL+L GG RGMY+FE+ NG +
Sbjct: 892 LSNQKDKETDDKTPMTPQKLKLGTKVTAKVYQIRARGLVLDLGGGIRGMYRFEMQPNGEK 951
Query: 177 DFEVGKELQVRCSSFSTKGIPVFSLSENE 263
DF VG EL V+CSSF++KGIPV SL + E
Sbjct: 952 DFNVGDELPVQCSSFTSKGIPVMSLVDEE 980
>ref|XP_006470281.1| PREDICTED: polyribonucleotide nucleotidyltransferase 2,
mitochondrial-like [Citrus sinensis]
Length = 974
Score = 95.9 bits (237), Expect = 8e-18
Identities = 47/87 (54%), Positives = 64/87 (73%), Gaps = 5/87 (5%)
Frame = +3
Query: 15 DDGDSKSKPS-----AQAQSLKIGDRLPAKVYQIRTHGLVLELSGGTRGMYKFEVNGRRD 179
+DGD +K + A++LK+G ++ AKVYQ+R HGLVL+L GG RGMY+FE N ++D
Sbjct: 888 EDGDEDNKGTRAEAIVSAKNLKLGTKVAAKVYQVRAHGLVLDLGGGIRGMYRFENNEKKD 947
Query: 180 FEVGKELQVRCSSFSTKGIPVFSLSEN 260
F VG EL V+CSSF+ KGIPV SL ++
Sbjct: 948 FVVGDELLVKCSSFTGKGIPVVSLVDS 974