BLASTX nr result

ID: Zingiber24_contig00033200 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00033200
         (453 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004970100.1| PREDICTED: lipoyl synthase, chloroplastic-li...    73   4e-11
gb|AFW84944.1| lipoic acid synthetase [Zea mays]                       72   6e-11
ref|XP_002456408.1| hypothetical protein SORBIDRAFT_03g035760 [S...    72   6e-11
gb|ACN35267.1| unknown [Zea mays] gi|413952294|gb|AFW84943.1| hy...    72   6e-11
ref|NP_001150279.1| lipoyl synthase 1, chloroplastic [Zea mays] ...    72   6e-11
ref|NP_001170321.1| lipoyl synthase 2, chloroplastic [Zea mays] ...    71   2e-10
ref|XP_006646365.1| PREDICTED: lipoyl synthase 1, chloroplastic-...    69   6e-10
ref|NP_001044370.1| Os01g0769100 [Oryza sativa Japonica Group] g...    69   6e-10
gb|EAZ13677.1| hypothetical protein OsJ_03597 [Oryza sativa Japo...    69   6e-10
dbj|BAJ96350.1| predicted protein [Hordeum vulgare subsp. vulgare]     66   5e-09
ref|XP_006349804.1| PREDICTED: lipoyl synthase 1, chloroplastic-...    65   9e-09
ref|XP_004252893.1| PREDICTED: lipoyl synthase, chloroplastic-li...    65   9e-09
ref|XP_002329366.1| predicted protein [Populus trichocarpa] gi|5...    65   9e-09
ref|XP_002319912.1| hypothetical protein POPTR_0013s13960g [Popu...    65   1e-08
sp|B8B016.1|LISC2_ORYSI RecName: Full=Lipoyl synthase 2, chlorop...    65   1e-08
ref|NP_001056016.1| Os05g0511500 [Oryza sativa Japonica Group] g...    65   1e-08
ref|XP_002270080.1| PREDICTED: lipoyl synthase, chloroplastic [V...    64   2e-08
gb|EMS56216.1| Lipoyl synthase 2, chloroplastic [Triticum urartu]      64   2e-08
ref|XP_004298608.1| PREDICTED: lipoyl synthase, chloroplastic-li...    64   2e-08
ref|XP_004147097.1| PREDICTED: lipoyl synthase, chloroplastic-li...    64   2e-08

>ref|XP_004970100.1| PREDICTED: lipoyl synthase, chloroplastic-like [Setaria italica]
          Length = 367

 Score = 72.8 bits (177), Expect = 4e-11
 Identities = 34/42 (80%), Positives = 38/42 (90%)
 Frame = +3

Query: 3   EYGESIGFRYIASGPLVRSSYRAGELFVQNLVKGSKTSAERS 128
           EYGES+GFRY+ASGPLVRSSYRAGELFVQNLV+ SKT +  S
Sbjct: 326 EYGESVGFRYVASGPLVRSSYRAGELFVQNLVRNSKTLSSSS 367


>gb|AFW84944.1| lipoic acid synthetase [Zea mays]
          Length = 361

 Score = 72.4 bits (176), Expect = 6e-11
 Identities = 33/42 (78%), Positives = 38/42 (90%)
 Frame = +3

Query: 3   EYGESIGFRYIASGPLVRSSYRAGELFVQNLVKGSKTSAERS 128
           EYGES+GFRY+ASGPLVRSSYRAGELFVQNLV+ +KT +  S
Sbjct: 320 EYGESVGFRYVASGPLVRSSYRAGELFVQNLVRNNKTGSSSS 361


>ref|XP_002456408.1| hypothetical protein SORBIDRAFT_03g035760 [Sorghum bicolor]
           gi|308197094|sp|C5XKZ1.1|LISC_SORBI RecName: Full=Lipoyl
           synthase, chloroplastic; AltName: Full=Lipoate synthase;
           Short=LS; Short=Lip-syn; AltName: Full=Lipoate synthase,
           plastidial; Short=LIP1p; AltName: Full=Lipoic acid
           synthase; Flags: Precursor gi|241928383|gb|EES01528.1|
           hypothetical protein SORBIDRAFT_03g035760 [Sorghum
           bicolor]
          Length = 368

 Score = 72.4 bits (176), Expect = 6e-11
 Identities = 33/42 (78%), Positives = 38/42 (90%)
 Frame = +3

Query: 3   EYGESIGFRYIASGPLVRSSYRAGELFVQNLVKGSKTSAERS 128
           EYGES+GFRY+ASGPLVRSSYRAGELFVQNLV+ +KT +  S
Sbjct: 327 EYGESVGFRYVASGPLVRSSYRAGELFVQNLVRNNKTGSSSS 368


>gb|ACN35267.1| unknown [Zea mays] gi|413952294|gb|AFW84943.1| hypothetical protein
           ZEAMMB73_234609 [Zea mays]
          Length = 103

 Score = 72.4 bits (176), Expect = 6e-11
 Identities = 33/42 (78%), Positives = 38/42 (90%)
 Frame = +3

Query: 3   EYGESIGFRYIASGPLVRSSYRAGELFVQNLVKGSKTSAERS 128
           EYGES+GFRY+ASGPLVRSSYRAGELFVQNLV+ +KT +  S
Sbjct: 62  EYGESVGFRYVASGPLVRSSYRAGELFVQNLVRNNKTGSSSS 103


>ref|NP_001150279.1| lipoyl synthase 1, chloroplastic [Zea mays]
           gi|308191443|sp|B6TN12.1|LISC1_MAIZE RecName:
           Full=Lipoyl synthase 1, chloroplastic; AltName:
           Full=Lipoate synthase 1; Short=LS 1; Short=Lip-syn 1;
           AltName: Full=Lipoate synthase, plastidial 1;
           Short=LIP1p 1; AltName: Full=Lipoic acid synthase 1;
           Flags: Precursor gi|195638054|gb|ACG38495.1| lipoic acid
           synthetase [Zea mays]
          Length = 361

 Score = 72.4 bits (176), Expect = 6e-11
 Identities = 33/42 (78%), Positives = 38/42 (90%)
 Frame = +3

Query: 3   EYGESIGFRYIASGPLVRSSYRAGELFVQNLVKGSKTSAERS 128
           EYGES+GFRY+ASGPLVRSSYRAGELFVQNLV+ +KT +  S
Sbjct: 320 EYGESVGFRYVASGPLVRSSYRAGELFVQNLVRNNKTGSSSS 361


>ref|NP_001170321.1| lipoyl synthase 2, chloroplastic [Zea mays]
           gi|308191446|sp|C0PN26.1|LISC2_MAIZE RecName:
           Full=Lipoyl synthase 2, chloroplastic; AltName:
           Full=Lipoate synthase 2; Short=LS 2; Short=Lip-syn 2;
           AltName: Full=Lipoate synthase, plastidial 2;
           Short=LIP1p 2; AltName: Full=Lipoic acid synthase 2;
           Flags: Precursor gi|224035033|gb|ACN36592.1| unknown
           [Zea mays] gi|414880321|tpg|DAA57452.1| TPA:
           hypothetical protein ZEAMMB73_664124 [Zea mays]
          Length = 367

 Score = 70.9 bits (172), Expect = 2e-10
 Identities = 31/39 (79%), Positives = 37/39 (94%)
 Frame = +3

Query: 3   EYGESIGFRYIASGPLVRSSYRAGELFVQNLVKGSKTSA 119
           EYGES+GFRY+ASGPLVRSSYRAGELF+QNLV+ +KT +
Sbjct: 317 EYGESVGFRYVASGPLVRSSYRAGELFIQNLVRNNKTES 355


>ref|XP_006646365.1| PREDICTED: lipoyl synthase 1, chloroplastic-like [Oryza
           brachyantha]
          Length = 306

 Score = 68.9 bits (167), Expect = 6e-10
 Identities = 31/36 (86%), Positives = 35/36 (97%)
 Frame = +3

Query: 3   EYGESIGFRYIASGPLVRSSYRAGELFVQNLVKGSK 110
           EYGES+GFRY+ASGPLVRSSYRAGELFVQNLV+ +K
Sbjct: 263 EYGESVGFRYVASGPLVRSSYRAGELFVQNLVRNNK 298


>ref|NP_001044370.1| Os01g0769100 [Oryza sativa Japonica Group]
           gi|75112766|sp|Q5ZAQ2.1|LISC1_ORYSJ RecName: Full=Lipoyl
           synthase 1, chloroplastic; AltName: Full=Lipoate
           synthase 1; Short=LS 1; Short=Lip-syn 1; AltName:
           Full=Lipoate synthase, plastidial 1; Short=LIP1p 1;
           AltName: Full=Lipoic acid synthase 1; Flags: Precursor
           gi|308191550|sp|B8AA76.2|LISC1_ORYSI RecName:
           Full=Lipoyl synthase 1, chloroplastic; AltName:
           Full=Lipoate synthase 1; Short=LS 1; Short=Lip-syn 1;
           AltName: Full=Lipoate synthase, plastidial 1;
           Short=LIP1p 1; AltName: Full=Lipoic acid synthase 1;
           Flags: Precursor gi|53791363|dbj|BAD52715.1| putative
           lipoic acid synthetase isoform 1 [Oryza sativa Japonica
           Group] gi|53793569|dbj|BAD53339.1| putative lipoic acid
           synthetase isoform 1 [Oryza sativa Japonica Group]
           gi|113533901|dbj|BAF06284.1| Os01g0769100 [Oryza sativa
           Japonica Group]
          Length = 370

 Score = 68.9 bits (167), Expect = 6e-10
 Identities = 31/36 (86%), Positives = 35/36 (97%)
 Frame = +3

Query: 3   EYGESIGFRYIASGPLVRSSYRAGELFVQNLVKGSK 110
           EYGES+GFRY+ASGPLVRSSYRAGELFVQNLV+ +K
Sbjct: 328 EYGESVGFRYVASGPLVRSSYRAGELFVQNLVRNNK 363


>gb|EAZ13677.1| hypothetical protein OsJ_03597 [Oryza sativa Japonica Group]
           gi|218189121|gb|EEC71548.1| hypothetical protein
           OsI_03888 [Oryza sativa Indica Group]
          Length = 365

 Score = 68.9 bits (167), Expect = 6e-10
 Identities = 31/36 (86%), Positives = 35/36 (97%)
 Frame = +3

Query: 3   EYGESIGFRYIASGPLVRSSYRAGELFVQNLVKGSK 110
           EYGES+GFRY+ASGPLVRSSYRAGELFVQNLV+ +K
Sbjct: 323 EYGESVGFRYVASGPLVRSSYRAGELFVQNLVRNNK 358


>dbj|BAJ96350.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 360

 Score = 65.9 bits (159), Expect = 5e-09
 Identities = 30/37 (81%), Positives = 34/37 (91%)
 Frame = +3

Query: 3   EYGESIGFRYIASGPLVRSSYRAGELFVQNLVKGSKT 113
           EYGES+GF Y+ASGPLVRSSYRAGELFV+NLV+  KT
Sbjct: 317 EYGESLGFCYVASGPLVRSSYRAGELFVENLVRNKKT 353


>ref|XP_006349804.1| PREDICTED: lipoyl synthase 1, chloroplastic-like [Solanum
           tuberosum]
          Length = 376

 Score = 65.1 bits (157), Expect = 9e-09
 Identities = 30/40 (75%), Positives = 36/40 (90%)
 Frame = +3

Query: 3   EYGESIGFRYIASGPLVRSSYRAGELFVQNLVKGSKTSAE 122
           +YGESIGFRY+ASGPLVRSSYRAGELFV+ +VK S  +A+
Sbjct: 333 DYGESIGFRYVASGPLVRSSYRAGELFVKTMVKESARNAQ 372


>ref|XP_004252893.1| PREDICTED: lipoyl synthase, chloroplastic-like [Solanum
           lycopersicum]
          Length = 434

 Score = 65.1 bits (157), Expect = 9e-09
 Identities = 30/40 (75%), Positives = 36/40 (90%)
 Frame = +3

Query: 3   EYGESIGFRYIASGPLVRSSYRAGELFVQNLVKGSKTSAE 122
           +YGESIGFRY+ASGPLVRSSYRAGELFV+ +VK S  +A+
Sbjct: 391 DYGESIGFRYVASGPLVRSSYRAGELFVKTMVKESARNAQ 430


>ref|XP_002329366.1| predicted protein [Populus trichocarpa]
           gi|566243753|ref|XP_006371583.1| hypothetical protein
           POPTR_0019s13380g [Populus trichocarpa]
           gi|308191448|sp|B9N2B0.1|LISC2_POPTR RecName:
           Full=Lipoyl synthase 2, chloroplastic; AltName:
           Full=Lipoate synthase 2; Short=LS 2; Short=Lip-syn 2;
           AltName: Full=Lipoate synthase, plastidial 2;
           Short=LIP1p 2; AltName: Full=Lipoic acid synthase 2;
           Flags: Precursor gi|550317462|gb|ERP49380.1|
           hypothetical protein POPTR_0019s13380g [Populus
           trichocarpa]
          Length = 397

 Score = 65.1 bits (157), Expect = 9e-09
 Identities = 31/39 (79%), Positives = 34/39 (87%)
 Frame = +3

Query: 3   EYGESIGFRYIASGPLVRSSYRAGELFVQNLVKGSKTSA 119
           EYGESIGFRY+ASGPLVRSSYRAGELFV+ +VK S   A
Sbjct: 355 EYGESIGFRYVASGPLVRSSYRAGELFVKTMVKESAKEA 393


>ref|XP_002319912.1| hypothetical protein POPTR_0013s13960g [Populus trichocarpa]
           gi|308191445|sp|B9I666.1|LISC1_POPTR RecName:
           Full=Lipoyl synthase 1, chloroplastic; AltName:
           Full=Lipoate synthase 1; Short=LS 1; Short=Lip-syn 1;
           AltName: Full=Lipoate synthase, plastidial 1;
           Short=LIP1p 1; AltName: Full=Lipoic acid synthase 1;
           Flags: Precursor gi|222858288|gb|EEE95835.1|
           hypothetical protein POPTR_0013s13960g [Populus
           trichocarpa]
          Length = 376

 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 31/39 (79%), Positives = 34/39 (87%)
 Frame = +3

Query: 3   EYGESIGFRYIASGPLVRSSYRAGELFVQNLVKGSKTSA 119
           EYGESIGFRY+ASGPLVRSSYRAGELFV+ +VK S   A
Sbjct: 334 EYGESIGFRYVASGPLVRSSYRAGELFVKTMVKESVKEA 372


>sp|B8B016.1|LISC2_ORYSI RecName: Full=Lipoyl synthase 2, chloroplastic; AltName:
           Full=Lipoate synthase 2; Short=LS 2; Short=Lip-syn 2;
           AltName: Full=Lipoate synthase, plastidial 2;
           Short=LIP1p 2; AltName: Full=Lipoic acid synthase 2;
           Flags: Precursor gi|218197086|gb|EEC79513.1|
           hypothetical protein OsI_20590 [Oryza sativa Indica
           Group]
          Length = 384

 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 30/36 (83%), Positives = 33/36 (91%)
 Frame = +3

Query: 3   EYGESIGFRYIASGPLVRSSYRAGELFVQNLVKGSK 110
           EYGES+GF Y+ASGPLVRSSYRAGELFVQNLV+  K
Sbjct: 341 EYGESLGFLYVASGPLVRSSYRAGELFVQNLVRRKK 376


>ref|NP_001056016.1| Os05g0511500 [Oryza sativa Japonica Group]
           gi|75126677|sp|Q6L534.1|LISC2_ORYSJ RecName: Full=Lipoyl
           synthase 2, chloroplastic; AltName: Full=Lipoate
           synthase 2; Short=LS 2; Short=Lip-syn 2; AltName:
           Full=Lipoate synthase, plastidial 2; Short=LIP1p 2;
           AltName: Full=Lipoic acid synthase 2; Flags: Precursor
           gi|48475073|gb|AAT44142.1| putative lipoic acid
           synthase, contains radical SAM superfamily [Oryza sativa
           Japonica Group] gi|55733780|gb|AAV59287.1| putative
           lipoic acid synthetase [Oryza sativa Japonica Group]
           gi|113579567|dbj|BAF17930.1| Os05g0511500 [Oryza sativa
           Japonica Group] gi|215678803|dbj|BAG95240.1| unnamed
           protein product [Oryza sativa Japonica Group]
           gi|222632195|gb|EEE64327.1| hypothetical protein
           OsJ_19166 [Oryza sativa Japonica Group]
          Length = 384

 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 30/36 (83%), Positives = 33/36 (91%)
 Frame = +3

Query: 3   EYGESIGFRYIASGPLVRSSYRAGELFVQNLVKGSK 110
           EYGES+GF Y+ASGPLVRSSYRAGELFVQNLV+  K
Sbjct: 341 EYGESLGFLYVASGPLVRSSYRAGELFVQNLVRRKK 376


>ref|XP_002270080.1| PREDICTED: lipoyl synthase, chloroplastic [Vitis vinifera]
           gi|297742716|emb|CBI35350.3| unnamed protein product
           [Vitis vinifera]
          Length = 372

 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 32/46 (69%), Positives = 39/46 (84%)
 Frame = +3

Query: 3   EYGESIGFRYIASGPLVRSSYRAGELFVQNLVKGSKTSAERSDKIA 140
           EYGESIGFRY+ASGPLVRSSYRAGELFV+++V+  + SA  +  IA
Sbjct: 328 EYGESIGFRYVASGPLVRSSYRAGELFVKSMVR-ERASASATASIA 372


>gb|EMS56216.1| Lipoyl synthase 2, chloroplastic [Triticum urartu]
          Length = 285

 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 29/36 (80%), Positives = 33/36 (91%)
 Frame = +3

Query: 3   EYGESIGFRYIASGPLVRSSYRAGELFVQNLVKGSK 110
           EYGES+GF Y+ASGPLVRSSYRAGELFV+NLV+  K
Sbjct: 242 EYGESLGFCYVASGPLVRSSYRAGELFVENLVRNKK 277


>ref|XP_004298608.1| PREDICTED: lipoyl synthase, chloroplastic-like [Fragaria vesca
           subsp. vesca]
          Length = 532

 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 30/42 (71%), Positives = 36/42 (85%)
 Frame = +3

Query: 3   EYGESIGFRYIASGPLVRSSYRAGELFVQNLVKGSKTSAERS 128
           EYGESIGFRY+ASGPLVRSSYRAGELFV+ +V+ S  +  +S
Sbjct: 274 EYGESIGFRYVASGPLVRSSYRAGELFVKTMVRESAGAIRQS 315


>ref|XP_004147097.1| PREDICTED: lipoyl synthase, chloroplastic-like [Cucumis sativus]
           gi|449526690|ref|XP_004170346.1| PREDICTED: lipoyl
           synthase, chloroplastic-like [Cucumis sativus]
          Length = 398

 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 29/33 (87%), Positives = 32/33 (96%)
 Frame = +3

Query: 3   EYGESIGFRYIASGPLVRSSYRAGELFVQNLVK 101
           EYGESIGFRY+ASGPLVRSSYRAGELFVQ +V+
Sbjct: 357 EYGESIGFRYVASGPLVRSSYRAGELFVQTMVR 389


Top