BLASTX nr result
ID: Zingiber24_contig00033161
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00033161
(598 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003600696.1| Splicing factor 3B subunit [Medicago truncat... 108 8e-22
ref|XP_004503120.1| PREDICTED: splicing factor 3B subunit 4-like... 107 2e-21
ref|XP_004306971.1| PREDICTED: splicing factor 3B subunit 4-like... 107 2e-21
ref|XP_006341070.1| PREDICTED: splicing factor 3B subunit 4-like... 106 5e-21
ref|XP_006341534.1| PREDICTED: splicing factor 3B subunit 4-like... 105 7e-21
gb|EOX91144.1| RNA-binding family protein isoform 2 [Theobroma c... 105 7e-21
gb|EOX91143.1| RNA-binding family protein isoform 1 [Theobroma c... 105 7e-21
ref|XP_004235773.1| PREDICTED: splicing factor 3B subunit 4-like... 105 7e-21
ref|XP_002516394.1| spliceosome associated protein, putative [Ri... 105 7e-21
gb|EXB59124.1| Splicing factor 3B subunit 4 [Morus notabilis] 104 2e-20
ref|XP_003540544.1| PREDICTED: splicing factor 3B subunit 4-like... 102 6e-20
ref|XP_002271291.1| PREDICTED: splicing factor 3B subunit 4 [Vit... 102 8e-20
emb|CAN68319.1| hypothetical protein VITISV_032191 [Vitis vinifera] 102 8e-20
gb|AEI98619.1| hypothetical protein 111O18.6 [Coffea canephora] 102 1e-19
gb|EMJ19363.1| hypothetical protein PRUPE_ppa007508mg [Prunus pe... 101 2e-19
ref|XP_004147654.1| PREDICTED: splicing factor 3B subunit 4-like... 101 2e-19
ref|XP_003534692.1| PREDICTED: splicing factor 3B subunit 4-like... 100 2e-19
ref|XP_006425712.1| hypothetical protein CICLE_v10025862mg [Citr... 99 7e-19
ref|XP_006425711.1| hypothetical protein CICLE_v10025862mg [Citr... 99 7e-19
ref|XP_006425710.1| hypothetical protein CICLE_v10025862mg [Citr... 99 7e-19
>ref|XP_003600696.1| Splicing factor 3B subunit [Medicago truncatula]
gi|355489744|gb|AES70947.1| Splicing factor 3B subunit
[Medicago truncatula]
Length = 379
Score = 108 bits (271), Expect = 8e-22
Identities = 50/62 (80%), Positives = 53/62 (85%)
Frame = -3
Query: 596 KKDTKGERHGTPAERVLAASNPGTQRIRPHTLFASGPPTLPNGALANGPIPAAIPPRPFM 417
KKDTKGERHGTPAERVLAASNP Q+ RPHTLFASGPP+LPN ANG IPA +PPRPF
Sbjct: 191 KKDTKGERHGTPAERVLAASNPTAQKSRPHTLFASGPPSLPNAPQANGTIPAPVPPRPFA 250
Query: 416 NG 411
NG
Sbjct: 251 NG 252
>ref|XP_004503120.1| PREDICTED: splicing factor 3B subunit 4-like [Cicer arietinum]
Length = 379
Score = 107 bits (267), Expect = 2e-21
Identities = 49/62 (79%), Positives = 52/62 (83%)
Frame = -3
Query: 596 KKDTKGERHGTPAERVLAASNPGTQRIRPHTLFASGPPTLPNGALANGPIPAAIPPRPFM 417
KKDTKGERHGTPAER LA SNP Q+ RPHTLFASGPPTLPN A ANG +PA +PPRPF
Sbjct: 191 KKDTKGERHGTPAERTLAESNPTAQKSRPHTLFASGPPTLPNVAQANGTVPAPVPPRPFA 250
Query: 416 NG 411
NG
Sbjct: 251 NG 252
>ref|XP_004306971.1| PREDICTED: splicing factor 3B subunit 4-like [Fragaria vesca subsp.
vesca]
Length = 371
Score = 107 bits (267), Expect = 2e-21
Identities = 51/64 (79%), Positives = 55/64 (85%)
Frame = -3
Query: 596 KKDTKGERHGTPAERVLAASNPGTQRIRPHTLFASGPPTLPNGALANGPIPAAIPPRPFM 417
KKDTKGERHGTPAERVLAASNP T + RPHTLFASGPPTLPNGA ANG + A +PPRPF
Sbjct: 191 KKDTKGERHGTPAERVLAASNP-TSKSRPHTLFASGPPTLPNGAQANGAMGAPVPPRPFA 249
Query: 416 NGSI 405
NG +
Sbjct: 250 NGGV 253
>ref|XP_006341070.1| PREDICTED: splicing factor 3B subunit 4-like [Solanum tuberosum]
Length = 363
Score = 106 bits (264), Expect = 5e-21
Identities = 49/62 (79%), Positives = 53/62 (85%)
Frame = -3
Query: 596 KKDTKGERHGTPAERVLAASNPGTQRIRPHTLFASGPPTLPNGALANGPIPAAIPPRPFM 417
KKDTKGERHGTPAERVLA+SNPGTQ+ RPHT+FASGPPTLP ANG + A IPPRPF
Sbjct: 191 KKDTKGERHGTPAERVLASSNPGTQKNRPHTMFASGPPTLPGVPQANGAVGAPIPPRPFA 250
Query: 416 NG 411
NG
Sbjct: 251 NG 252
>ref|XP_006341534.1| PREDICTED: splicing factor 3B subunit 4-like [Solanum tuberosum]
Length = 364
Score = 105 bits (263), Expect = 7e-21
Identities = 48/62 (77%), Positives = 53/62 (85%)
Frame = -3
Query: 596 KKDTKGERHGTPAERVLAASNPGTQRIRPHTLFASGPPTLPNGALANGPIPAAIPPRPFM 417
KKDTKGERHGTPAERVLA+SNPGTQ+ RPHT+FASGPPTLP ANG + A +PPRPF
Sbjct: 191 KKDTKGERHGTPAERVLASSNPGTQKNRPHTMFASGPPTLPGVPQANGAVGAPVPPRPFA 250
Query: 416 NG 411
NG
Sbjct: 251 NG 252
>gb|EOX91144.1| RNA-binding family protein isoform 2 [Theobroma cacao]
Length = 280
Score = 105 bits (263), Expect = 7e-21
Identities = 48/64 (75%), Positives = 54/64 (84%)
Frame = -3
Query: 596 KKDTKGERHGTPAERVLAASNPGTQRIRPHTLFASGPPTLPNGALANGPIPAAIPPRPFM 417
KKDTKGERHGTPAERVLAASNP Q+ RPHTLFAS PP+LP+G ANG I A +PPRPF
Sbjct: 104 KKDTKGERHGTPAERVLAASNPNAQKSRPHTLFASAPPSLPSGPQANGAIGAPVPPRPFA 163
Query: 416 NGSI 405
NG++
Sbjct: 164 NGTV 167
>gb|EOX91143.1| RNA-binding family protein isoform 1 [Theobroma cacao]
Length = 367
Score = 105 bits (263), Expect = 7e-21
Identities = 48/64 (75%), Positives = 54/64 (84%)
Frame = -3
Query: 596 KKDTKGERHGTPAERVLAASNPGTQRIRPHTLFASGPPTLPNGALANGPIPAAIPPRPFM 417
KKDTKGERHGTPAERVLAASNP Q+ RPHTLFAS PP+LP+G ANG I A +PPRPF
Sbjct: 191 KKDTKGERHGTPAERVLAASNPNAQKSRPHTLFASAPPSLPSGPQANGAIGAPVPPRPFA 250
Query: 416 NGSI 405
NG++
Sbjct: 251 NGTV 254
>ref|XP_004235773.1| PREDICTED: splicing factor 3B subunit 4-like [Solanum lycopersicum]
Length = 364
Score = 105 bits (263), Expect = 7e-21
Identities = 48/62 (77%), Positives = 53/62 (85%)
Frame = -3
Query: 596 KKDTKGERHGTPAERVLAASNPGTQRIRPHTLFASGPPTLPNGALANGPIPAAIPPRPFM 417
KKDTKGERHGTPAERVLA+SNPGTQ+ RPHT+FASGPPTLP ANG + A +PPRPF
Sbjct: 191 KKDTKGERHGTPAERVLASSNPGTQKNRPHTMFASGPPTLPGVPQANGAVGAPVPPRPFA 250
Query: 416 NG 411
NG
Sbjct: 251 NG 252
>ref|XP_002516394.1| spliceosome associated protein, putative [Ricinus communis]
gi|223544492|gb|EEF46011.1| spliceosome associated
protein, putative [Ricinus communis]
Length = 376
Score = 105 bits (263), Expect = 7e-21
Identities = 48/64 (75%), Positives = 55/64 (85%)
Frame = -3
Query: 596 KKDTKGERHGTPAERVLAASNPGTQRIRPHTLFASGPPTLPNGALANGPIPAAIPPRPFM 417
KKDTKGERHGTPAERVLAASNP +Q+ RPHTLFASGPPTLP+ ANG + A +PPRPF
Sbjct: 191 KKDTKGERHGTPAERVLAASNPSSQKSRPHTLFASGPPTLPSIPQANGTVGAPVPPRPFA 250
Query: 416 NGSI 405
NG++
Sbjct: 251 NGAV 254
>gb|EXB59124.1| Splicing factor 3B subunit 4 [Morus notabilis]
Length = 373
Score = 104 bits (259), Expect = 2e-20
Identities = 49/64 (76%), Positives = 55/64 (85%)
Frame = -3
Query: 596 KKDTKGERHGTPAERVLAASNPGTQRIRPHTLFASGPPTLPNGALANGPIPAAIPPRPFM 417
KKDTKGERHGTPAERVLAASNP ++ RPHTLFASGPPTLPNG ANG + A +PPRPF
Sbjct: 191 KKDTKGERHGTPAERVLAASNPSSKS-RPHTLFASGPPTLPNGPQANGTMGAPVPPRPFA 249
Query: 416 NGSI 405
NG++
Sbjct: 250 NGAV 253
>ref|XP_003540544.1| PREDICTED: splicing factor 3B subunit 4-like [Glycine max]
Length = 364
Score = 102 bits (255), Expect = 6e-20
Identities = 49/62 (79%), Positives = 53/62 (85%)
Frame = -3
Query: 596 KKDTKGERHGTPAERVLAASNPGTQRIRPHTLFASGPPTLPNGALANGPIPAAIPPRPFM 417
KKDTKGERHGTPAERVLAASNP TQ+ RPHTLFASGPPTLP+ ANG P +PPRPF+
Sbjct: 191 KKDTKGERHGTPAERVLAASNPTTQKSRPHTLFASGPPTLPSAPQANGVAP--VPPRPFV 248
Query: 416 NG 411
NG
Sbjct: 249 NG 250
>ref|XP_002271291.1| PREDICTED: splicing factor 3B subunit 4 [Vitis vinifera]
Length = 373
Score = 102 bits (254), Expect = 8e-20
Identities = 48/64 (75%), Positives = 52/64 (81%)
Frame = -3
Query: 596 KKDTKGERHGTPAERVLAASNPGTQRIRPHTLFASGPPTLPNGALANGPIPAAIPPRPFM 417
KKDTKGERHGTPAERVLAASNP + RPHTLFASGPPTLPN ANG + A +PPRPF
Sbjct: 191 KKDTKGERHGTPAERVLAASNPSAPKSRPHTLFASGPPTLPNVPQANGNMGAPMPPRPFA 250
Query: 416 NGSI 405
NG +
Sbjct: 251 NGVV 254
>emb|CAN68319.1| hypothetical protein VITISV_032191 [Vitis vinifera]
Length = 312
Score = 102 bits (254), Expect = 8e-20
Identities = 48/64 (75%), Positives = 52/64 (81%)
Frame = -3
Query: 596 KKDTKGERHGTPAERVLAASNPGTQRIRPHTLFASGPPTLPNGALANGPIPAAIPPRPFM 417
KKDTKGERHGTPAERVLAASNP + RPHTLFASGPPTLPN ANG + A +PPRPF
Sbjct: 130 KKDTKGERHGTPAERVLAASNPSAPKSRPHTLFASGPPTLPNVPQANGNMGAPMPPRPFA 189
Query: 416 NGSI 405
NG +
Sbjct: 190 NGVV 193
>gb|AEI98619.1| hypothetical protein 111O18.6 [Coffea canephora]
Length = 368
Score = 102 bits (253), Expect = 1e-19
Identities = 47/64 (73%), Positives = 53/64 (82%)
Frame = -3
Query: 596 KKDTKGERHGTPAERVLAASNPGTQRIRPHTLFASGPPTLPNGALANGPIPAAIPPRPFM 417
KKDTKGERHGTPAERVLAASNP Q+ RPHT+FASGPPTL N A A+ I A +PPRPF
Sbjct: 191 KKDTKGERHGTPAERVLAASNPNVQKSRPHTMFASGPPTLQNVAQASANIAAPVPPRPFA 250
Query: 416 NGSI 405
NG++
Sbjct: 251 NGNV 254
>gb|EMJ19363.1| hypothetical protein PRUPE_ppa007508mg [Prunus persica]
Length = 365
Score = 101 bits (251), Expect = 2e-19
Identities = 48/64 (75%), Positives = 53/64 (82%)
Frame = -3
Query: 596 KKDTKGERHGTPAERVLAASNPGTQRIRPHTLFASGPPTLPNGALANGPIPAAIPPRPFM 417
KKDTKGERHGTPAERVLAASNP T + RPHTLFASGPPTL NG +NG + A +PPRPF
Sbjct: 191 KKDTKGERHGTPAERVLAASNP-TSKSRPHTLFASGPPTLANGPQSNGTMGAPVPPRPFA 249
Query: 416 NGSI 405
NG +
Sbjct: 250 NGGV 253
>ref|XP_004147654.1| PREDICTED: splicing factor 3B subunit 4-like [Cucumis sativus]
gi|449498825|ref|XP_004160645.1| PREDICTED: splicing
factor 3B subunit 4-like [Cucumis sativus]
Length = 379
Score = 101 bits (251), Expect = 2e-19
Identities = 50/64 (78%), Positives = 53/64 (82%)
Frame = -3
Query: 596 KKDTKGERHGTPAERVLAASNPGTQRIRPHTLFASGPPTLPNGALANGPIPAAIPPRPFM 417
KKDTKGERHGTPAERVLAASNP Q+ RPHTLFASGPPTLP A NG I A +PPRPF
Sbjct: 191 KKDTKGERHGTPAERVLAASNP--QKSRPHTLFASGPPTLPKVAQPNGAIGAPVPPRPFA 248
Query: 416 NGSI 405
NG+I
Sbjct: 249 NGAI 252
>ref|XP_003534692.1| PREDICTED: splicing factor 3B subunit 4-like [Glycine max]
Length = 365
Score = 100 bits (250), Expect = 2e-19
Identities = 49/62 (79%), Positives = 52/62 (83%)
Frame = -3
Query: 596 KKDTKGERHGTPAERVLAASNPGTQRIRPHTLFASGPPTLPNGALANGPIPAAIPPRPFM 417
KKDTKGERHGTPAERVLAASNP TQ+ RPHTLFASGPPTLP+ ANG P +PPRPF
Sbjct: 191 KKDTKGERHGTPAERVLAASNPTTQKSRPHTLFASGPPTLPSVPQANGVAP--VPPRPFA 248
Query: 416 NG 411
NG
Sbjct: 249 NG 250
>ref|XP_006425712.1| hypothetical protein CICLE_v10025862mg [Citrus clementina]
gi|568824776|ref|XP_006466770.1| PREDICTED: splicing
factor 3B subunit 4-like [Citrus sinensis]
gi|557527702|gb|ESR38952.1| hypothetical protein
CICLE_v10025862mg [Citrus clementina]
Length = 377
Score = 99.4 bits (246), Expect = 7e-19
Identities = 43/63 (68%), Positives = 52/63 (82%)
Frame = -3
Query: 596 KKDTKGERHGTPAERVLAASNPGTQRIRPHTLFASGPPTLPNGALANGPIPAAIPPRPFM 417
KKDTKGERHGTPAER+LAA+NP +Q+ RPHTLFASGPP+L N ANG + +PPRP+
Sbjct: 191 KKDTKGERHGTPAERILAANNPSSQKSRPHTLFASGPPSLQNAPQANGTVGGPVPPRPYA 250
Query: 416 NGS 408
NG+
Sbjct: 251 NGA 253
>ref|XP_006425711.1| hypothetical protein CICLE_v10025862mg [Citrus clementina]
gi|557527701|gb|ESR38951.1| hypothetical protein
CICLE_v10025862mg [Citrus clementina]
Length = 290
Score = 99.4 bits (246), Expect = 7e-19
Identities = 43/63 (68%), Positives = 52/63 (82%)
Frame = -3
Query: 596 KKDTKGERHGTPAERVLAASNPGTQRIRPHTLFASGPPTLPNGALANGPIPAAIPPRPFM 417
KKDTKGERHGTPAER+LAA+NP +Q+ RPHTLFASGPP+L N ANG + +PPRP+
Sbjct: 104 KKDTKGERHGTPAERILAANNPSSQKSRPHTLFASGPPSLQNAPQANGTVGGPVPPRPYA 163
Query: 416 NGS 408
NG+
Sbjct: 164 NGA 166
>ref|XP_006425710.1| hypothetical protein CICLE_v10025862mg [Citrus clementina]
gi|557527700|gb|ESR38950.1| hypothetical protein
CICLE_v10025862mg [Citrus clementina]
Length = 204
Score = 99.4 bits (246), Expect = 7e-19
Identities = 43/63 (68%), Positives = 52/63 (82%)
Frame = -3
Query: 596 KKDTKGERHGTPAERVLAASNPGTQRIRPHTLFASGPPTLPNGALANGPIPAAIPPRPFM 417
KKDTKGERHGTPAER+LAA+NP +Q+ RPHTLFASGPP+L N ANG + +PPRP+
Sbjct: 18 KKDTKGERHGTPAERILAANNPSSQKSRPHTLFASGPPSLQNAPQANGTVGGPVPPRPYA 77
Query: 416 NGS 408
NG+
Sbjct: 78 NGA 80