BLASTX nr result
ID: Zingiber24_contig00033047
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00033047
(409 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006853783.1| hypothetical protein AMTR_s00056p00209700 [A... 116 3e-24
gb|EMJ24122.1| hypothetical protein PRUPE_ppa003696mg [Prunus pe... 109 4e-22
ref|XP_004148429.1| PREDICTED: RNA polymerase sigma factor sigC-... 108 7e-22
ref|XP_006475980.1| PREDICTED: RNA polymerase sigma factor sigC-... 106 4e-21
ref|XP_006450763.1| hypothetical protein CICLE_v10007968mg [Citr... 106 4e-21
ref|XP_004291147.1| PREDICTED: RNA polymerase sigma factor sigC-... 104 1e-20
gb|EXB75636.1| RNA polymerase sigma factor rpoD [Morus notabilis] 102 7e-20
ref|XP_006655649.1| PREDICTED: RNA polymerase sigma factor sigC-... 100 3e-19
ref|XP_002275831.1| PREDICTED: RNA polymerase sigma factor rpoD ... 100 3e-19
emb|CAN83254.1| hypothetical protein VITISV_036980 [Vitis vinifera] 100 3e-19
gb|EEE64878.1| hypothetical protein OsJ_19735 [Oryza sativa Japo... 99 4e-19
gb|EEC79783.1| hypothetical protein OsI_21197 [Oryza sativa Indi... 99 4e-19
gb|AAT58808.1| hypothetical protein [Oryza sativa Japonica Group] 99 4e-19
gb|AAT37999.1| putative RNA polymerase sigma factor [Oryza sativ... 99 4e-19
gb|EMS62514.1| RNA polymerase sigma factor rpoD [Triticum urartu] 99 8e-19
gb|EMT28763.1| RNA polymerase sigma factor rpoD [Aegilops tauschii] 98 1e-18
ref|NP_190960.1| RNA polymerase sigma-subunit C [Arabidopsis tha... 98 1e-18
gb|AAM91534.1| sigma factor SigC [Arabidopsis thaliana] 98 1e-18
dbj|BAA22215.1| plastid RNA polymerase sigma-subunit [Arabidopsi... 97 2e-18
gb|EOY29838.1| RNApolymerase sigma-subunit C, putative [Theobrom... 97 2e-18
>ref|XP_006853783.1| hypothetical protein AMTR_s00056p00209700 [Amborella trichopoda]
gi|548857444|gb|ERN15250.1| hypothetical protein
AMTR_s00056p00209700 [Amborella trichopoda]
Length = 529
Score = 116 bits (291), Expect = 3e-24
Identities = 55/92 (59%), Positives = 73/92 (79%)
Frame = -1
Query: 409 MEITADTSVKSPYEFIGKEHAREQILNLLQTLHPRERQVLALRYGLGDGRCRSLEEIGRL 230
ME+TADT +++P + + K+H RE I +L LHPRE+QVL LRYGL DGRC+SLEEIGRL
Sbjct: 436 MEVTADTFIETPEKMVMKQHMREAIHEVLVNLHPREKQVLMLRYGLWDGRCKSLEEIGRL 495
Query: 229 CHVSREWIRKIEKEALSKIRSQEMQKRLSHYL 134
+V++EWIRKIEK AL K+R +E+Q L+ +L
Sbjct: 496 YNVTKEWIRKIEKMALEKVRKEEVQCNLNFFL 527
>gb|EMJ24122.1| hypothetical protein PRUPE_ppa003696mg [Prunus persica]
Length = 555
Score = 109 bits (272), Expect = 4e-22
Identities = 56/92 (60%), Positives = 71/92 (77%)
Frame = -1
Query: 409 MEITADTSVKSPYEFIGKEHAREQILNLLQTLHPRERQVLALRYGLGDGRCRSLEEIGRL 230
ME T DTS+KSP E + ++H ++ I +LL+ L+ RERQVL LRYGL + +SLEEIGRL
Sbjct: 462 MEFTPDTSLKSPEETVMRQHMKKDIHDLLKGLNLRERQVLVLRYGLNNYDPKSLEEIGRL 521
Query: 229 CHVSREWIRKIEKEALSKIRSQEMQKRLSHYL 134
HVS+EWIRKIEK+AL K+R +E K LSHYL
Sbjct: 522 FHVSKEWIRKIEKKALMKLRVEESHKYLSHYL 553
>ref|XP_004148429.1| PREDICTED: RNA polymerase sigma factor sigC-like [Cucumis sativus]
gi|449507267|ref|XP_004162982.1| PREDICTED: RNA
polymerase sigma factor sigC-like [Cucumis sativus]
Length = 559
Score = 108 bits (270), Expect = 7e-22
Identities = 51/92 (55%), Positives = 71/92 (77%)
Frame = -1
Query: 409 MEITADTSVKSPYEFIGKEHAREQILNLLQTLHPRERQVLALRYGLGDGRCRSLEEIGRL 230
ME TAD S++SP E + ++ ++ I N+LQ L RERQVL LRYGL D +SLEEIG+L
Sbjct: 467 MEFTADMSIQSPEETVKRKLMKKDIFNILQRLESRERQVLVLRYGLVDFEPKSLEEIGKL 526
Query: 229 CHVSREWIRKIEKEALSKIRSQEMQKRLSHYL 134
H+S+EW+RKIEK+A++K++++E K LSHYL
Sbjct: 527 LHISKEWVRKIEKKAMTKLKNEETVKHLSHYL 558
>ref|XP_006475980.1| PREDICTED: RNA polymerase sigma factor sigC-like [Citrus sinensis]
Length = 534
Score = 106 bits (264), Expect = 4e-21
Identities = 49/92 (53%), Positives = 69/92 (75%)
Frame = -1
Query: 409 MEITADTSVKSPYEFIGKEHAREQILNLLQTLHPRERQVLALRYGLGDGRCRSLEEIGRL 230
+E D SVKSP E + ++H ++ + +L++L RERQVL LRYGL D R +SLEEIG+L
Sbjct: 441 LEFAPDRSVKSPKEIVMRQHMKKDVFRILESLDSRERQVLVLRYGLNDHRPKSLEEIGKL 500
Query: 229 CHVSREWIRKIEKEALSKIRSQEMQKRLSHYL 134
HVS+EWIRK+EK+A++K+R E + LSH+L
Sbjct: 501 FHVSKEWIRKLEKKAMTKLRDSETCRDLSHFL 532
>ref|XP_006450763.1| hypothetical protein CICLE_v10007968mg [Citrus clementina]
gi|557553989|gb|ESR64003.1| hypothetical protein
CICLE_v10007968mg [Citrus clementina]
Length = 534
Score = 106 bits (264), Expect = 4e-21
Identities = 49/92 (53%), Positives = 69/92 (75%)
Frame = -1
Query: 409 MEITADTSVKSPYEFIGKEHAREQILNLLQTLHPRERQVLALRYGLGDGRCRSLEEIGRL 230
+E D SVKSP E + ++H ++ + +L++L RERQVL LRYGL D R +SLEEIG+L
Sbjct: 441 LEFAPDRSVKSPKEIVMRQHMKKDVFRILESLDSRERQVLVLRYGLNDHRPKSLEEIGKL 500
Query: 229 CHVSREWIRKIEKEALSKIRSQEMQKRLSHYL 134
HVS+EWIRK+EK+A++K+R E + LSH+L
Sbjct: 501 FHVSKEWIRKLEKKAMTKLRDSETCRDLSHFL 532
>ref|XP_004291147.1| PREDICTED: RNA polymerase sigma factor sigC-like [Fragaria vesca
subsp. vesca]
Length = 545
Score = 104 bits (259), Expect = 1e-20
Identities = 52/93 (55%), Positives = 70/93 (75%)
Frame = -1
Query: 409 MEITADTSVKSPYEFIGKEHAREQILNLLQTLHPRERQVLALRYGLGDGRCRSLEEIGRL 230
ME T D +V++P E + ++H + I LL+ L+ RE++VLALRYGL +SLEEIGRL
Sbjct: 451 MEFTPDIAVETPEESVMRQHMKNDIHVLLEGLNSREKKVLALRYGLNYCNPKSLEEIGRL 510
Query: 229 CHVSREWIRKIEKEALSKIRSQEMQKRLSHYLQ 131
HVS+EWIRKIEK AL+K+R++E K LSHYL+
Sbjct: 511 FHVSKEWIRKIEKNALTKLRNEESNKNLSHYLK 543
>gb|EXB75636.1| RNA polymerase sigma factor rpoD [Morus notabilis]
Length = 476
Score = 102 bits (253), Expect = 7e-20
Identities = 53/92 (57%), Positives = 69/92 (75%)
Frame = -1
Query: 409 MEITADTSVKSPYEFIGKEHAREQILNLLQTLHPRERQVLALRYGLGDGRCRSLEEIGRL 230
ME AD S+K+P E + ++H + I NLL+TL PRERQVL LRYGL + + +SLEEIG+L
Sbjct: 384 MEFMADMSIKTPEETVMRQHMKSDIHNLLETLDPRERQVLVLRYGLINCQPKSLEEIGKL 443
Query: 229 CHVSREWIRKIEKEALSKIRSQEMQKRLSHYL 134
VS+EWIRKIEK+AL+K+R E + SHYL
Sbjct: 444 FKVSKEWIRKIEKKALTKLR-DETNEDFSHYL 474
>ref|XP_006655649.1| PREDICTED: RNA polymerase sigma factor sigC-like [Oryza brachyantha]
Length = 826
Score = 100 bits (248), Expect = 3e-19
Identities = 46/91 (50%), Positives = 69/91 (75%)
Frame = -1
Query: 409 MEITADTSVKSPYEFIGKEHAREQILNLLQTLHPRERQVLALRYGLGDGRCRSLEEIGRL 230
+E+T DTS+++P E + + RE++L++L L PRE VL LR+GL DG+CRSLE+IG +
Sbjct: 733 VEVTPDTSLEAPDEAMFRMQLRERLLHVLDRLPPREGHVLKLRHGLEDGKCRSLEQIGSI 792
Query: 229 CHVSREWIRKIEKEALSKIRSQEMQKRLSHY 137
HVS+EWIRKIEK A+SK+R++++ L +
Sbjct: 793 YHVSKEWIRKIEKSAMSKLRNEDVHNELKDF 823
>ref|XP_002275831.1| PREDICTED: RNA polymerase sigma factor rpoD [Vitis vinifera]
gi|296081598|emb|CBI20603.3| unnamed protein product
[Vitis vinifera]
Length = 561
Score = 100 bits (248), Expect = 3e-19
Identities = 49/92 (53%), Positives = 68/92 (73%)
Frame = -1
Query: 409 MEITADTSVKSPYEFIGKEHAREQILNLLQTLHPRERQVLALRYGLGDGRCRSLEEIGRL 230
+E T DTS+KSP E ++ R+ I NLL+ L PRERQ+L LRYG G+ + +SLEEIGR
Sbjct: 468 LEFTPDTSIKSPEEGFMQQCKRKDIHNLLKGLDPRERQILVLRYGFGEQQRKSLEEIGRR 527
Query: 229 CHVSREWIRKIEKEALSKIRSQEMQKRLSHYL 134
+VS+EWIRK+EK AL+ +R +E+ + L HY+
Sbjct: 528 FNVSKEWIRKLEKTALANLRDEEICQNLRHYV 559
>emb|CAN83254.1| hypothetical protein VITISV_036980 [Vitis vinifera]
Length = 611
Score = 100 bits (248), Expect = 3e-19
Identities = 49/92 (53%), Positives = 68/92 (73%)
Frame = -1
Query: 409 MEITADTSVKSPYEFIGKEHAREQILNLLQTLHPRERQVLALRYGLGDGRCRSLEEIGRL 230
+E T DTS+KSP E ++ R+ I NLL+ L PRERQ+L LRYG G+ + +SLEEIGR
Sbjct: 518 LEFTPDTSIKSPEEGFMQQCKRKDIHNLLKGLDPRERQILVLRYGFGEQQRKSLEEIGRR 577
Query: 229 CHVSREWIRKIEKEALSKIRSQEMQKRLSHYL 134
+VS+EWIRK+EK AL+ +R +E+ + L HY+
Sbjct: 578 FNVSKEWIRKLEKTALANLRDEEICQNLRHYV 609
>gb|EEE64878.1| hypothetical protein OsJ_19735 [Oryza sativa Japonica Group]
Length = 1012
Score = 99.4 bits (246), Expect = 4e-19
Identities = 46/91 (50%), Positives = 68/91 (74%)
Frame = -1
Query: 409 MEITADTSVKSPYEFIGKEHAREQILNLLQTLHPRERQVLALRYGLGDGRCRSLEEIGRL 230
+E+T DTS+++P E + + RE++L++L L PRE VL LR+GL DG+CRSLE+IG +
Sbjct: 919 VEVTPDTSLEAPDEAMFRMQLRERLLHVLDRLPPREGHVLKLRHGLEDGKCRSLEQIGSI 978
Query: 229 CHVSREWIRKIEKEALSKIRSQEMQKRLSHY 137
HVS+EWIRKIEK A+SK+R+ ++ L +
Sbjct: 979 YHVSKEWIRKIEKSAMSKLRNDDVHNELKDF 1009
>gb|EEC79783.1| hypothetical protein OsI_21197 [Oryza sativa Indica Group]
Length = 557
Score = 99.4 bits (246), Expect = 4e-19
Identities = 46/91 (50%), Positives = 68/91 (74%)
Frame = -1
Query: 409 MEITADTSVKSPYEFIGKEHAREQILNLLQTLHPRERQVLALRYGLGDGRCRSLEEIGRL 230
+E+T DTS+++P E + + RE++L++L L PRE VL LR+GL DG+CRSLE+IG +
Sbjct: 464 VEVTPDTSLEAPDEAMFRMQLRERLLHVLDRLPPREGHVLKLRHGLEDGKCRSLEQIGSI 523
Query: 229 CHVSREWIRKIEKEALSKIRSQEMQKRLSHY 137
HVS+EWIRKIEK A+SK+R+ ++ L +
Sbjct: 524 YHVSKEWIRKIEKSAMSKLRNDDVHNELKDF 554
>gb|AAT58808.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 799
Score = 99.4 bits (246), Expect = 4e-19
Identities = 46/91 (50%), Positives = 68/91 (74%)
Frame = -1
Query: 409 MEITADTSVKSPYEFIGKEHAREQILNLLQTLHPRERQVLALRYGLGDGRCRSLEEIGRL 230
+E+T DTS+++P E + + RE++L++L L PRE VL LR+GL DG+CRSLE+IG +
Sbjct: 706 VEVTPDTSLEAPDEAMFRMQLRERLLHVLDRLPPREGHVLKLRHGLEDGKCRSLEQIGSI 765
Query: 229 CHVSREWIRKIEKEALSKIRSQEMQKRLSHY 137
HVS+EWIRKIEK A+SK+R+ ++ L +
Sbjct: 766 YHVSKEWIRKIEKSAMSKLRNDDVHNELKDF 796
>gb|AAT37999.1| putative RNA polymerase sigma factor [Oryza sativa Japonica Group]
Length = 882
Score = 99.4 bits (246), Expect = 4e-19
Identities = 46/91 (50%), Positives = 68/91 (74%)
Frame = -1
Query: 409 MEITADTSVKSPYEFIGKEHAREQILNLLQTLHPRERQVLALRYGLGDGRCRSLEEIGRL 230
+E+T DTS+++P E + + RE++L++L L PRE VL LR+GL DG+CRSLE+IG +
Sbjct: 789 VEVTPDTSLEAPDEAMFRMQLRERLLHVLDRLPPREGHVLKLRHGLEDGKCRSLEQIGSI 848
Query: 229 CHVSREWIRKIEKEALSKIRSQEMQKRLSHY 137
HVS+EWIRKIEK A+SK+R+ ++ L +
Sbjct: 849 YHVSKEWIRKIEKSAMSKLRNDDVHNELKDF 879
>gb|EMS62514.1| RNA polymerase sigma factor rpoD [Triticum urartu]
Length = 570
Score = 98.6 bits (244), Expect = 8e-19
Identities = 47/91 (51%), Positives = 67/91 (73%)
Frame = -1
Query: 409 MEITADTSVKSPYEFIGKEHAREQILNLLQTLHPRERQVLALRYGLGDGRCRSLEEIGRL 230
M++T DTS++ P E I + RE++L +L L RE +VL LR+GL DGRCRSLE+IG +
Sbjct: 477 MDVTPDTSLEDPEEAIFRRQLRERLLMVLDRLPAREGRVLKLRHGLEDGRCRSLEQIGGI 536
Query: 229 CHVSREWIRKIEKEALSKIRSQEMQKRLSHY 137
HVS+EWIRKIEK A+SK+R++++ L +
Sbjct: 537 YHVSKEWIRKIEKSAMSKLRNEDVHGELKDF 567
>gb|EMT28763.1| RNA polymerase sigma factor rpoD [Aegilops tauschii]
Length = 576
Score = 98.2 bits (243), Expect = 1e-18
Identities = 46/91 (50%), Positives = 67/91 (73%)
Frame = -1
Query: 409 MEITADTSVKSPYEFIGKEHAREQILNLLQTLHPRERQVLALRYGLGDGRCRSLEEIGRL 230
+++T DTS++ P E I + RE++L +L L RE +VL LR+GL DGRCRSLE+IG +
Sbjct: 483 VDVTPDTSIEDPEEAIFRRQLRERLLMVLDRLPTREGRVLKLRHGLEDGRCRSLEQIGGI 542
Query: 229 CHVSREWIRKIEKEALSKIRSQEMQKRLSHY 137
HVS+EWIRKIEK A+SK+R++++ L +
Sbjct: 543 YHVSKEWIRKIEKSAMSKLRNEDVHDELKDF 573
>ref|NP_190960.1| RNA polymerase sigma-subunit C [Arabidopsis thaliana]
gi|75098239|sp|O24621.1|SIGC_ARATH RecName: Full=RNA
polymerase sigma factor sigC; Short=Sigma factor C;
Short=Sigma-C; AltName: Full=RNA polymerase sigma factor
sig3; Short=Atsig3; Short=Sigma factor 3; Flags:
Precursor gi|2353175|gb|AAB69386.1| sigma factor 3
[Arabidopsis thaliana] gi|2463554|dbj|BAA22530.1| SigC
[Arabidopsis thaliana] gi|5478585|dbj|BAA82450.1| sigma
factor SigC [Arabidopsis thaliana]
gi|7630012|emb|CAB88354.1| sigma factor SigC
[Arabidopsis thaliana] gi|133778870|gb|ABO38775.1|
At3g53920 [Arabidopsis thaliana]
gi|332645638|gb|AEE79159.1| RNApolymerase sigma-subunit
C [Arabidopsis thaliana]
Length = 571
Score = 97.8 bits (242), Expect = 1e-18
Identities = 48/92 (52%), Positives = 68/92 (73%)
Frame = -1
Query: 409 MEITADTSVKSPYEFIGKEHAREQILNLLQTLHPRERQVLALRYGLGDGRCRSLEEIGRL 230
+E T DT+++SP E + ++ AR I +LL+ L PRE+QV+ LRYGL D R +SLEEIG+L
Sbjct: 478 LEFTPDTTMESPEEAVMRQSARRDIHDLLEGLEPREKQVMVLRYGLQDYRPKSLEEIGKL 537
Query: 229 CHVSREWIRKIEKEALSKIRSQEMQKRLSHYL 134
VS+EWIRKIE+ A++K+R Q + L +YL
Sbjct: 538 LKVSKEWIRKIERRAMAKLRDQPNAEDLRYYL 569
>gb|AAM91534.1| sigma factor SigC [Arabidopsis thaliana]
Length = 291
Score = 97.8 bits (242), Expect = 1e-18
Identities = 48/92 (52%), Positives = 68/92 (73%)
Frame = -1
Query: 409 MEITADTSVKSPYEFIGKEHAREQILNLLQTLHPRERQVLALRYGLGDGRCRSLEEIGRL 230
+E T DT+++SP E + ++ AR I +LL+ L PRE+QV+ LRYGL D R +SLEEIG+L
Sbjct: 198 LEFTPDTTMESPEEAVMRQSARRDIHDLLEGLEPREKQVMVLRYGLQDYRPKSLEEIGKL 257
Query: 229 CHVSREWIRKIEKEALSKIRSQEMQKRLSHYL 134
VS+EWIRKIE+ A++K+R Q + L +YL
Sbjct: 258 LKVSKEWIRKIERRAMAKLRDQPNAEDLRYYL 289
>dbj|BAA22215.1| plastid RNA polymerase sigma-subunit [Arabidopsis thaliana]
Length = 571
Score = 97.4 bits (241), Expect = 2e-18
Identities = 48/92 (52%), Positives = 68/92 (73%)
Frame = -1
Query: 409 MEITADTSVKSPYEFIGKEHAREQILNLLQTLHPRERQVLALRYGLGDGRCRSLEEIGRL 230
+E T DT+++SP E + ++ AR I +LL+ L PRE+QV+ LRYGL D R +SLEEIG+L
Sbjct: 478 LEFTPDTTMESPEEAVMRQSARRDIHDLLEGLEPREKQVMVLRYGLQDYRPKSLEEIGKL 537
Query: 229 CHVSREWIRKIEKEALSKIRSQEMQKRLSHYL 134
VS+EWIRKIE+ A++K+R Q + L +YL
Sbjct: 538 FKVSKEWIRKIERRAMAKLRDQPNAEDLRYYL 569
>gb|EOY29838.1| RNApolymerase sigma-subunit C, putative [Theobroma cacao]
Length = 848
Score = 97.1 bits (240), Expect = 2e-18
Identities = 48/92 (52%), Positives = 65/92 (70%)
Frame = -1
Query: 409 MEITADTSVKSPYEFIGKEHAREQILNLLQTLHPRERQVLALRYGLGDGRCRSLEEIGRL 230
+E D SV+SP + + ++H +E I +LL L RERQV+ LRYGL +SLEEIGRL
Sbjct: 755 LEFIPDLSVRSPEKTVMRQHMKEDIHDLLNGLDARERQVMVLRYGLKGSPPKSLEEIGRL 814
Query: 229 CHVSREWIRKIEKEALSKIRSQEMQKRLSHYL 134
HVS+EWIR+IE +A+ K+R +E + LSHYL
Sbjct: 815 FHVSKEWIRRIEMKAMKKLRDKETCRNLSHYL 846