BLASTX nr result
ID: Zingiber24_contig00033043
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00033043
(249 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003633446.1| PREDICTED: E3 ubiquitin-protein ligase SHPRH... 60 2e-07
emb|CBI25341.3| unnamed protein product [Vitis vinifera] 60 2e-07
gb|EEE67827.1| hypothetical protein OsJ_25598 [Oryza sativa Japo... 59 5e-07
gb|EEC82693.1| hypothetical protein OsI_27351 [Oryza sativa Indi... 59 5e-07
ref|XP_006658968.1| PREDICTED: E3 ubiquitin-protein ligase SHPRH... 58 1e-06
ref|XP_006435949.1| hypothetical protein CICLE_v10030489mg [Citr... 55 7e-06
ref|XP_006435948.1| hypothetical protein CICLE_v10030489mg [Citr... 55 7e-06
ref|NP_181609.4| RING-finger, DEAD-like helicase, PHD and SNF2 d... 55 1e-05
>ref|XP_003633446.1| PREDICTED: E3 ubiquitin-protein ligase SHPRH-like [Vitis vinifera]
Length = 1704
Score = 60.5 bits (145), Expect = 2e-07
Identities = 37/83 (44%), Positives = 48/83 (57%), Gaps = 1/83 (1%)
Frame = +2
Query: 2 KTSSMQVSKNLNELENQSS-WWLHALNLINQNKESSEDLKRKIEQALSRNAQSAGLXXXX 178
K S MQV +LN+ +NQ S WWL AL I QNK++S +L +KI A+S +A
Sbjct: 1004 KKSYMQVCDSLNDGKNQHSVWWLEALTQIEQNKDASGELIKKIGDAVSGPLNNARSSRID 1063
Query: 179 XXXXXXXGLMYNIQTSLDSLGSS 247
LMY+IQT LDSL +S
Sbjct: 1064 SCFRSINALMYHIQTGLDSLEAS 1086
>emb|CBI25341.3| unnamed protein product [Vitis vinifera]
Length = 1717
Score = 60.5 bits (145), Expect = 2e-07
Identities = 37/83 (44%), Positives = 48/83 (57%), Gaps = 1/83 (1%)
Frame = +2
Query: 2 KTSSMQVSKNLNELENQSS-WWLHALNLINQNKESSEDLKRKIEQALSRNAQSAGLXXXX 178
K S MQV +LN+ +NQ S WWL AL I QNK++S +L +KI A+S +A
Sbjct: 1029 KKSYMQVCDSLNDGKNQHSVWWLEALTQIEQNKDASGELIKKIGDAVSGPLNNARSSRID 1088
Query: 179 XXXXXXXGLMYNIQTSLDSLGSS 247
LMY+IQT LDSL +S
Sbjct: 1089 SCFRSINALMYHIQTGLDSLEAS 1111
>gb|EEE67827.1| hypothetical protein OsJ_25598 [Oryza sativa Japonica Group]
Length = 1663
Score = 59.3 bits (142), Expect = 5e-07
Identities = 33/81 (40%), Positives = 49/81 (60%), Gaps = 1/81 (1%)
Frame = +2
Query: 8 SSMQVSKNLNELENQS-SWWLHALNLINQNKESSEDLKRKIEQALSRNAQSAGLXXXXXX 184
S +VS EL+NQ+ +WWL+AL+ I QNK+S+++L RKI+ + +++ G
Sbjct: 984 SFTEVSTLSMELQNQNMNWWLYALDCIEQNKDSADELIRKIDISSNKSTTGLGSTGMSSR 1043
Query: 185 XXXXXGLMYNIQTSLDSLGSS 247
GL Y IQT +DSL SS
Sbjct: 1044 VQTIAGLKYTIQTGIDSLQSS 1064
>gb|EEC82693.1| hypothetical protein OsI_27351 [Oryza sativa Indica Group]
Length = 1547
Score = 59.3 bits (142), Expect = 5e-07
Identities = 33/81 (40%), Positives = 49/81 (60%), Gaps = 1/81 (1%)
Frame = +2
Query: 8 SSMQVSKNLNELENQS-SWWLHALNLINQNKESSEDLKRKIEQALSRNAQSAGLXXXXXX 184
S +VS EL+NQ+ +WWL+AL+ I QNK+S+++L RKI+ + +++ G
Sbjct: 868 SFTEVSTLSMELQNQNMNWWLYALDCIEQNKDSADELIRKIDISSNKSTTGLGSTGMSSR 927
Query: 185 XXXXXGLMYNIQTSLDSLGSS 247
GL Y IQT +DSL SS
Sbjct: 928 VQTIAGLKYTIQTGIDSLQSS 948
>ref|XP_006658968.1| PREDICTED: E3 ubiquitin-protein ligase SHPRH-like [Oryza brachyantha]
Length = 1650
Score = 58.2 bits (139), Expect = 1e-06
Identities = 32/81 (39%), Positives = 48/81 (59%), Gaps = 1/81 (1%)
Frame = +2
Query: 8 SSMQVSKNLNELENQS-SWWLHALNLINQNKESSEDLKRKIEQALSRNAQSAGLXXXXXX 184
S +VS EL+NQ+ +WWL+AL+ I QNK+S+++L RKI+ + +++ G
Sbjct: 974 SFTEVSTLSTELQNQNMNWWLYALDCIEQNKDSADELIRKIDISSNKSTTGLGSTGMSSR 1033
Query: 185 XXXXXGLMYNIQTSLDSLGSS 247
GL Y IQ +DSL SS
Sbjct: 1034 VQTISGLKYTIQAGIDSLQSS 1054
>ref|XP_006435949.1| hypothetical protein CICLE_v10030489mg [Citrus clementina]
gi|568865570|ref|XP_006486147.1| PREDICTED: E3
ubiquitin-protein ligase SHPRH-like isoform X3 [Citrus
sinensis] gi|557538145|gb|ESR49189.1| hypothetical
protein CICLE_v10030489mg [Citrus clementina]
Length = 1236
Score = 55.5 bits (132), Expect = 7e-06
Identities = 33/83 (39%), Positives = 47/83 (56%), Gaps = 1/83 (1%)
Frame = +2
Query: 2 KTSSMQVSKNLNELENQ-SSWWLHALNLINQNKESSEDLKRKIEQALSRNAQSAGLXXXX 178
+ S MQV L++ E Q S+WWL AL+ NK+ S +L RKIE+A+S + +
Sbjct: 997 RKSYMQVCNALDDREKQYSAWWLEALHHAEGNKDFSAELIRKIEEAISGSLNKSRALRTA 1056
Query: 179 XXXXXXXGLMYNIQTSLDSLGSS 247
GL Y+IQ+SLD L +S
Sbjct: 1057 SRYRSISGLTYHIQSSLDQLEAS 1079
>ref|XP_006435948.1| hypothetical protein CICLE_v10030489mg [Citrus clementina]
gi|568865566|ref|XP_006486145.1| PREDICTED: E3
ubiquitin-protein ligase SHPRH-like isoform X1 [Citrus
sinensis] gi|568865568|ref|XP_006486146.1| PREDICTED: E3
ubiquitin-protein ligase SHPRH-like isoform X2 [Citrus
sinensis] gi|557538144|gb|ESR49188.1| hypothetical
protein CICLE_v10030489mg [Citrus clementina]
Length = 1685
Score = 55.5 bits (132), Expect = 7e-06
Identities = 33/83 (39%), Positives = 47/83 (56%), Gaps = 1/83 (1%)
Frame = +2
Query: 2 KTSSMQVSKNLNELENQ-SSWWLHALNLINQNKESSEDLKRKIEQALSRNAQSAGLXXXX 178
+ S MQV L++ E Q S+WWL AL+ NK+ S +L RKIE+A+S + +
Sbjct: 997 RKSYMQVCNALDDREKQYSAWWLEALHHAEGNKDFSAELIRKIEEAISGSLNKSRALRTA 1056
Query: 179 XXXXXXXGLMYNIQTSLDSLGSS 247
GL Y+IQ+SLD L +S
Sbjct: 1057 SRYRSISGLTYHIQSSLDQLEAS 1079
>ref|NP_181609.4| RING-finger, DEAD-like helicase, PHD and SNF2 domain-containing
protein [Arabidopsis thaliana]
gi|330254782|gb|AEC09876.1| RING-finger, DEAD-like
helicase, PHD and SNF2 domain-containing protein
[Arabidopsis thaliana]
Length = 1664
Score = 55.1 bits (131), Expect = 1e-05
Identities = 32/83 (38%), Positives = 45/83 (54%), Gaps = 1/83 (1%)
Frame = +2
Query: 2 KTSSMQVSKNLNELENQSS-WWLHALNLINQNKESSEDLKRKIEQALSRNAQSAGLXXXX 178
K S QVS++L+ + Q S WWL AL L QNK+ S +L RKIE+AL N ++
Sbjct: 978 KKSYNQVSESLSNMGKQRSVWWLDALQLTEQNKDFSSELTRKIEEALHGNLNNSSSSRES 1037
Query: 179 XXXXXXXGLMYNIQTSLDSLGSS 247
G+ ++QT +D L S
Sbjct: 1038 SRFRTIHGMKLHLQTCMDMLERS 1060