BLASTX nr result
ID: Zingiber24_contig00032995
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00032995
(313 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABR18037.1| unknown [Picea sitchensis] 61 2e-10
ref|XP_004962429.1| PREDICTED: ruBisCO large subunit-binding pro... 67 2e-09
ref|XP_006653189.1| PREDICTED: ruBisCO large subunit-binding pro... 67 2e-09
gb|EMJ06181.1| hypothetical protein PRUPE_ppa003328mg [Prunus pe... 67 2e-09
ref|NP_001066567.1| Os12g0277500 [Oryza sativa Japonica Group] g... 67 2e-09
gb|ABR25547.1| rubisco large subunit-binding protein subunit alp... 67 2e-09
ref|XP_006652052.1| PREDICTED: ruBisCO large subunit-binding pro... 66 4e-09
ref|XP_006424517.1| hypothetical protein CICLE_v10028085mg [Citr... 66 4e-09
ref|XP_006424516.1| hypothetical protein CICLE_v10028085mg [Citr... 66 4e-09
gb|EAY92674.1| hypothetical protein OsI_14427 [Oryza sativa Indi... 66 5e-09
gb|ABG00012.1| RuBisCO subunit binding-protein alpha subunit, ch... 66 5e-09
gb|AAP44754.1| putative rubisco subunit binding-protein alpha su... 66 5e-09
ref|XP_006827424.1| hypothetical protein AMTR_s00009p00080200 [A... 65 7e-09
gb|EMT15819.1| putative RuBisCO large subunit-binding protein su... 65 7e-09
gb|EMS63359.1| RuBisCO large subunit-binding protein subunit alp... 65 7e-09
dbj|BAJ93636.1| predicted protein [Hordeum vulgare subsp. vulgare] 65 7e-09
ref|XP_002440887.1| hypothetical protein SORBIDRAFT_09g014430 [S... 65 7e-09
ref|XP_003581066.1| PREDICTED: ruBisCO large subunit-binding pro... 65 9e-09
gb|AAC68501.1| chaperonin 60 alpha subunit [Canavalia lineata] 65 1e-08
gb|EOY34441.1| RuBisCO large subunit-binding protein subunit alp... 64 2e-08
>gb|ABR18037.1| unknown [Picea sitchensis]
Length = 598
Score = 61.2 bits (147), Expect(2) = 2e-10
Identities = 37/75 (49%), Positives = 47/75 (62%), Gaps = 9/75 (12%)
Frame = +2
Query: 80 ALIAHNAGVEGEVAVENIKDREWEIGDNAMTDRYGPSLG----DKMRSAKC-----LSVA 232
ALIA+NAGVEG+V VE I +WE+G NAMTD Y L D + A+C SVA
Sbjct: 510 ALIANNAGVEGDVVVEKILTSDWEMGYNAMTDTYENLLNSGVIDPSKVARCALQNAASVA 569
Query: 233 GMLFMTQAGMVLRPE 277
GM+ TQA +V +P+
Sbjct: 570 GMVLTTQAIVVEKPK 584
Score = 29.3 bits (64), Expect(2) = 2e-10
Identities = 15/24 (62%), Positives = 17/24 (70%)
Frame = +3
Query: 3 AIKGEIGGANEHIGADIVQKELIS 74
AIK I +E IGADIVQK L+S
Sbjct: 484 AIKQTIEDPDERIGADIVQKALVS 507
>ref|XP_004962429.1| PREDICTED: ruBisCO large subunit-binding protein subunit alpha,
chloroplastic-like [Setaria italica]
Length = 577
Score = 67.4 bits (163), Expect = 2e-09
Identities = 36/75 (48%), Positives = 47/75 (62%), Gaps = 9/75 (12%)
Frame = +2
Query: 80 ALIAHNAGVEGEVAVENIKDREWEIGDNAMTDRY---------GPSLGDKMRSAKCLSVA 232
+LIAHNAGVEGEV VE +K+ EWE+G NAMTD+Y P+ + SVA
Sbjct: 488 SLIAHNAGVEGEVVVEKVKESEWEVGYNAMTDKYENLMESGVIDPAKVTRCALQNAASVA 547
Query: 233 GMLFMTQAGMVLRPE 277
GM+ TQA +V +P+
Sbjct: 548 GMVLTTQAIVVEKPK 562
>ref|XP_006653189.1| PREDICTED: ruBisCO large subunit-binding protein subunit alpha,
chloroplastic-like [Oryza brachyantha]
Length = 579
Score = 67.0 bits (162), Expect = 2e-09
Identities = 37/75 (49%), Positives = 46/75 (61%), Gaps = 9/75 (12%)
Frame = +2
Query: 80 ALIAHNAGVEGEVAVENIKDREWEIGDNAMTDRY---------GPSLGDKMRSAKCLSVA 232
+LIAHNAGVEGEV VE IKD EWE+G NAM D+Y P+ + SVA
Sbjct: 490 SLIAHNAGVEGEVVVEKIKDGEWEVGYNAMNDKYENLIEAGVIDPAKVTRCALQNAASVA 549
Query: 233 GMLFMTQAGMVLRPE 277
GM+ TQA +V +P+
Sbjct: 550 GMVLTTQAIVVEKPK 564
>gb|EMJ06181.1| hypothetical protein PRUPE_ppa003328mg [Prunus persica]
Length = 585
Score = 67.0 bits (162), Expect = 2e-09
Identities = 37/75 (49%), Positives = 46/75 (61%), Gaps = 9/75 (12%)
Frame = +2
Query: 80 ALIAHNAGVEGEVAVENIKDREWEIGDNAMTDRY---------GPSLGDKMRSAKCLSVA 232
ALIA NAG+EGEV VE IKD EWE+G NAMTD+Y P+ + SVA
Sbjct: 497 ALIAQNAGIEGEVVVEKIKDSEWEVGYNAMTDKYENLVEAGVIDPAKVTRCALQNAASVA 556
Query: 233 GMLFMTQAGMVLRPE 277
GM+ TQA +V +P+
Sbjct: 557 GMVLTTQAIVVEKPK 571
>ref|NP_001066567.1| Os12g0277500 [Oryza sativa Japonica Group]
gi|77554291|gb|ABA97087.1| RuBisCO subunit
binding-protein alpha subunit, chloroplast precursor,
putative, expressed [Oryza sativa Japonica Group]
gi|113649074|dbj|BAF29586.1| Os12g0277500 [Oryza sativa
Japonica Group] gi|125536273|gb|EAY82761.1| hypothetical
protein OsI_37967 [Oryza sativa Indica Group]
gi|313575777|gb|ADR66968.1| 60 kDa chaperonin alpha
subunit [Oryza sativa Japonica Group]
Length = 578
Score = 67.0 bits (162), Expect = 2e-09
Identities = 37/75 (49%), Positives = 46/75 (61%), Gaps = 9/75 (12%)
Frame = +2
Query: 80 ALIAHNAGVEGEVAVENIKDREWEIGDNAMTDRY---------GPSLGDKMRSAKCLSVA 232
+LIAHNAGVEGEV VE IKD EWE+G NAM D+Y P+ + SVA
Sbjct: 489 SLIAHNAGVEGEVVVEKIKDGEWEVGYNAMNDKYENLIEAGVIDPAKVTRCALQNAASVA 548
Query: 233 GMLFMTQAGMVLRPE 277
GM+ TQA +V +P+
Sbjct: 549 GMVLTTQAIVVEKPK 563
>gb|ABR25547.1| rubisco large subunit-binding protein subunit alpha [Oryza sativa
Indica Group]
Length = 206
Score = 67.0 bits (162), Expect = 2e-09
Identities = 37/75 (49%), Positives = 46/75 (61%), Gaps = 9/75 (12%)
Frame = +2
Query: 80 ALIAHNAGVEGEVAVENIKDREWEIGDNAMTDRY---------GPSLGDKMRSAKCLSVA 232
+LIAHNAGVEGEV VE IKD EWE+G NAM D+Y P+ + SVA
Sbjct: 117 SLIAHNAGVEGEVVVEKIKDGEWEVGYNAMNDKYENLIEAGVIDPAKVTRCALQNAASVA 176
Query: 233 GMLFMTQAGMVLRPE 277
GM+ TQA +V +P+
Sbjct: 177 GMVLTTQAIVVEKPK 191
>ref|XP_006652052.1| PREDICTED: ruBisCO large subunit-binding protein subunit alpha,
chloroplastic-like [Oryza brachyantha]
Length = 582
Score = 66.2 bits (160), Expect = 4e-09
Identities = 37/75 (49%), Positives = 46/75 (61%), Gaps = 9/75 (12%)
Frame = +2
Query: 80 ALIAHNAGVEGEVAVENIKDREWEIGDNAMTDRY---------GPSLGDKMRSAKCLSVA 232
ALIAHNAGVEGEV VE IKD EWE+G NAM D++ P+ + SVA
Sbjct: 495 ALIAHNAGVEGEVIVEKIKDSEWEVGYNAMADKHENLVQAGVIDPAKVTRCALQNAASVA 554
Query: 233 GMLFMTQAGMVLRPE 277
GM+ TQA +V +P+
Sbjct: 555 GMVLTTQAIVVEKPK 569
>ref|XP_006424517.1| hypothetical protein CICLE_v10028085mg [Citrus clementina]
gi|557526451|gb|ESR37757.1| hypothetical protein
CICLE_v10028085mg [Citrus clementina]
Length = 526
Score = 66.2 bits (160), Expect = 4e-09
Identities = 38/75 (50%), Positives = 47/75 (62%), Gaps = 9/75 (12%)
Frame = +2
Query: 80 ALIAHNAGVEGEVAVENIKDREWEIGDNAMTDRYGPSLG----DKMRSAKC-----LSVA 232
+LIAHNAGVEGEV VE +KD EW G NAMTD+Y L D + +C SVA
Sbjct: 438 SLIAHNAGVEGEVVVEKVKDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVA 497
Query: 233 GMLFMTQAGMVLRPE 277
GM+ TQA +V +P+
Sbjct: 498 GMVLTTQAIVVEKPK 512
>ref|XP_006424516.1| hypothetical protein CICLE_v10028085mg [Citrus clementina]
gi|557526450|gb|ESR37756.1| hypothetical protein
CICLE_v10028085mg [Citrus clementina]
Length = 582
Score = 66.2 bits (160), Expect = 4e-09
Identities = 38/75 (50%), Positives = 47/75 (62%), Gaps = 9/75 (12%)
Frame = +2
Query: 80 ALIAHNAGVEGEVAVENIKDREWEIGDNAMTDRYGPSLG----DKMRSAKC-----LSVA 232
+LIAHNAGVEGEV VE +KD EW G NAMTD+Y L D + +C SVA
Sbjct: 494 SLIAHNAGVEGEVVVEKVKDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVA 553
Query: 233 GMLFMTQAGMVLRPE 277
GM+ TQA +V +P+
Sbjct: 554 GMVLTTQAIVVEKPK 568
>gb|EAY92674.1| hypothetical protein OsI_14427 [Oryza sativa Indica Group]
Length = 584
Score = 65.9 bits (159), Expect = 5e-09
Identities = 37/75 (49%), Positives = 46/75 (61%), Gaps = 9/75 (12%)
Frame = +2
Query: 80 ALIAHNAGVEGEVAVENIKDREWEIGDNAMTDRY---------GPSLGDKMRSAKCLSVA 232
ALIAHNAGVEGEV VE IK+ EWE+G NAM DR+ P+ + SVA
Sbjct: 494 ALIAHNAGVEGEVIVEKIKESEWEVGYNAMADRHENLVQAGVIDPAKVTRCALQNAASVA 553
Query: 233 GMLFMTQAGMVLRPE 277
GM+ TQA +V +P+
Sbjct: 554 GMVLTTQAIVVEKPK 568
>gb|ABG00012.1| RuBisCO subunit binding-protein alpha subunit, chloroplast
precursor, putative, expressed [Oryza sativa Japonica
Group]
Length = 479
Score = 65.9 bits (159), Expect = 5e-09
Identities = 37/75 (49%), Positives = 46/75 (61%), Gaps = 9/75 (12%)
Frame = +2
Query: 80 ALIAHNAGVEGEVAVENIKDREWEIGDNAMTDRY---------GPSLGDKMRSAKCLSVA 232
ALIAHNAGVEGEV VE IK+ EWE+G NAM DR+ P+ + SVA
Sbjct: 389 ALIAHNAGVEGEVIVEKIKESEWEVGYNAMADRHENLVQAGVIDPAKVTRCALQNAASVA 448
Query: 233 GMLFMTQAGMVLRPE 277
GM+ TQA +V +P+
Sbjct: 449 GMVLTTQAIVVEKPK 463
>gb|AAP44754.1| putative rubisco subunit binding-protein alpha subunit precursor
(60 kDa chaperonin alpha subunit) [Oryza sativa Japonica
Group] gi|108712216|gb|ABG00011.1| RuBisCO subunit
binding-protein alpha subunit, chloroplast precursor,
putative, expressed [Oryza sativa Japonica Group]
gi|125588715|gb|EAZ29379.1| hypothetical protein
OsJ_13451 [Oryza sativa Japonica Group]
gi|313575771|gb|ADR66965.1| 60 kDa chaperonin alpha
subunit [Oryza sativa Japonica Group]
Length = 584
Score = 65.9 bits (159), Expect = 5e-09
Identities = 37/75 (49%), Positives = 46/75 (61%), Gaps = 9/75 (12%)
Frame = +2
Query: 80 ALIAHNAGVEGEVAVENIKDREWEIGDNAMTDRY---------GPSLGDKMRSAKCLSVA 232
ALIAHNAGVEGEV VE IK+ EWE+G NAM DR+ P+ + SVA
Sbjct: 494 ALIAHNAGVEGEVIVEKIKESEWEVGYNAMADRHENLVQAGVIDPAKVTRCALQNAASVA 553
Query: 233 GMLFMTQAGMVLRPE 277
GM+ TQA +V +P+
Sbjct: 554 GMVLTTQAIVVEKPK 568
>ref|XP_006827424.1| hypothetical protein AMTR_s00009p00080200 [Amborella trichopoda]
gi|548832044|gb|ERM94840.1| hypothetical protein
AMTR_s00009p00080200 [Amborella trichopoda]
Length = 581
Score = 65.5 bits (158), Expect = 7e-09
Identities = 38/75 (50%), Positives = 45/75 (60%), Gaps = 9/75 (12%)
Frame = +2
Query: 80 ALIAHNAGVEGEVAVENIKDREWEIGDNAMTDRY---------GPSLGDKMRSAKCLSVA 232
ALIA NAGVEGEV VE IK EWE+G NAMTDRY P+ + SVA
Sbjct: 493 ALIAQNAGVEGEVIVEKIKTGEWEVGYNAMTDRYENLVEAGVIDPAKVTRCALQNAASVA 552
Query: 233 GMLFMTQAGMVLRPE 277
GM+ TQA +V +P+
Sbjct: 553 GMVLTTQAIVVEKPQ 567
>gb|EMT15819.1| putative RuBisCO large subunit-binding protein subunit alpha,
chloroplastic [Aegilops tauschii]
Length = 514
Score = 65.5 bits (158), Expect = 7e-09
Identities = 37/74 (50%), Positives = 45/74 (60%), Gaps = 9/74 (12%)
Frame = +2
Query: 80 ALIAHNAGVEGEVAVENIKDREWEIGDNAMTDRY---------GPSLGDKMRSAKCLSVA 232
+LIAHNAGVEGEV VE IKD EWE G NAMTD++ P+ + SVA
Sbjct: 426 SLIAHNAGVEGEVIVEKIKDSEWEFGYNAMTDKHENLVEAGVIDPAKVTRCALQNAASVA 485
Query: 233 GMLFMTQAGMVLRP 274
GM+ TQA +V +P
Sbjct: 486 GMVLTTQAIVVEKP 499
>gb|EMS63359.1| RuBisCO large subunit-binding protein subunit alpha, chloroplastic
[Triticum urartu]
Length = 525
Score = 65.5 bits (158), Expect = 7e-09
Identities = 37/74 (50%), Positives = 45/74 (60%), Gaps = 9/74 (12%)
Frame = +2
Query: 80 ALIAHNAGVEGEVAVENIKDREWEIGDNAMTDRY---------GPSLGDKMRSAKCLSVA 232
+LIAHNAGVEGEV VE IKD EWE G NAMTD++ P+ + SVA
Sbjct: 437 SLIAHNAGVEGEVIVEKIKDSEWEFGYNAMTDKHENLVEAGVIDPAKVTRCALQNAASVA 496
Query: 233 GMLFMTQAGMVLRP 274
GM+ TQA +V +P
Sbjct: 497 GMVLTTQAIVVEKP 510
>dbj|BAJ93636.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 587
Score = 65.5 bits (158), Expect = 7e-09
Identities = 37/74 (50%), Positives = 45/74 (60%), Gaps = 9/74 (12%)
Frame = +2
Query: 80 ALIAHNAGVEGEVAVENIKDREWEIGDNAMTDRY---------GPSLGDKMRSAKCLSVA 232
+LIAHNAGVEGEV VE IKD EWE G NAMTD++ P+ + SVA
Sbjct: 499 SLIAHNAGVEGEVIVEKIKDSEWEFGYNAMTDKHENLVEAGVIDPAKVTRCALQNAASVA 558
Query: 233 GMLFMTQAGMVLRP 274
GM+ TQA +V +P
Sbjct: 559 GMVLTTQAIVVEKP 572
>ref|XP_002440887.1| hypothetical protein SORBIDRAFT_09g014430 [Sorghum bicolor]
gi|241946172|gb|EES19317.1| hypothetical protein
SORBIDRAFT_09g014430 [Sorghum bicolor]
Length = 577
Score = 65.5 bits (158), Expect = 7e-09
Identities = 37/75 (49%), Positives = 45/75 (60%), Gaps = 9/75 (12%)
Frame = +2
Query: 80 ALIAHNAGVEGEVAVENIKDREWEIGDNAMTDRY---------GPSLGDKMRSAKCLSVA 232
+LIAHNAGVEGEV VE IKD WE+G NAMTD Y P+ + SVA
Sbjct: 488 SLIAHNAGVEGEVVVEKIKDSVWEVGYNAMTDTYENLIEAGVIDPAKVTRCALQNAASVA 547
Query: 233 GMLFMTQAGMVLRPE 277
GM+ TQA +V +P+
Sbjct: 548 GMVLTTQAIVVEKPK 562
>ref|XP_003581066.1| PREDICTED: ruBisCO large subunit-binding protein subunit alpha,
chloroplastic-like [Brachypodium distachyon]
Length = 578
Score = 65.1 bits (157), Expect = 9e-09
Identities = 41/81 (50%), Positives = 49/81 (60%), Gaps = 10/81 (12%)
Frame = +2
Query: 65 AYIAEA-LIAHNAGVEGEVAVENIKDREWEIGDNAMTDRY---------GPSLGDKMRSA 214
A IA A LIA+NAGVEGEV VE IKD EWE+G NAMTD Y P+ +
Sbjct: 483 ALIAPASLIANNAGVEGEVVVEKIKDSEWEMGYNAMTDTYENLIEAGVIDPAKVTRCALQ 542
Query: 215 KCLSVAGMLFMTQAGMVLRPE 277
SVAGM+ TQA +V +P+
Sbjct: 543 NAASVAGMVLTTQAIVVEKPK 563
>gb|AAC68501.1| chaperonin 60 alpha subunit [Canavalia lineata]
Length = 581
Score = 64.7 bits (156), Expect = 1e-08
Identities = 39/81 (48%), Positives = 49/81 (60%), Gaps = 10/81 (12%)
Frame = +2
Query: 65 AYIAEA-LIAHNAGVEGEVAVENIKDREWEIGDNAMTDRY---------GPSLGDKMRSA 214
A IA A LIA NAG+EGEV VE +K+ EWE+G NAMTDRY P+ +
Sbjct: 487 ALIAPASLIAQNAGIEGEVVVEKVKNGEWEVGYNAMTDRYENLVEAGVIDPAKVTRCALQ 546
Query: 215 KCLSVAGMLFMTQAGMVLRPE 277
SVAGM+ TQA +V +P+
Sbjct: 547 NAASVAGMVLTTQAIVVEKPK 567
>gb|EOY34441.1| RuBisCO large subunit-binding protein subunit alpha isoform 2
[Theobroma cacao]
Length = 586
Score = 63.9 bits (154), Expect = 2e-08
Identities = 37/75 (49%), Positives = 48/75 (64%), Gaps = 9/75 (12%)
Frame = +2
Query: 80 ALIAHNAGVEGEVAVENIKDREWEIGDNAMTDRYGPSLG----DKMRSAKCL-----SVA 232
+LIA NAG+EGEV VE +K+ EWEIG NAMTD+Y L D + +C SVA
Sbjct: 498 SLIAQNAGMEGEVVVEKVKNSEWEIGYNAMTDKYENLLEAGVIDPAKVTRCALQNASSVA 557
Query: 233 GMLFMTQAGMVLRPE 277
GM+ TQA +V +P+
Sbjct: 558 GMVLTTQAIVVEKPK 572