BLASTX nr result

ID: Zingiber24_contig00032942 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00032942
         (368 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EXC09721.1| Putative clathrin assembly protein [Morus notabilis]    60   3e-07
ref|NP_001175876.1| Os09g0468150 [Oryza sativa Japonica Group] g...    57   3e-06
gb|EEE69878.1| hypothetical protein OsJ_29693 [Oryza sativa Japo...    57   3e-06
ref|XP_006661333.1| PREDICTED: putative clathrin assembly protei...    55   7e-06

>gb|EXC09721.1| Putative clathrin assembly protein [Morus notabilis]
          Length = 352

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 37/103 (35%), Positives = 54/103 (52%), Gaps = 3/103 (2%)
 Frame = -3

Query: 366 DLISELDLLVEIVEVMSRAPEMAVVEGNNLVGEAVRLIEADRIAAXXXXXXXXXXXXXRT 187
           +LI E + LV ++E + + PE+ V   N LV E VRL+  D ++A             R 
Sbjct: 183 ELIRETESLVGLLEQICKQPEILVASANKLVDEIVRLVGDDCLSAINEISARVTEFGERL 242

Query: 186 TSLGFADSVELVCVLRRLEETRHR---PWDRKPTIGDWFWTGV 67
           + L F DSVEL C L+RLE+ + R    +  K  + D FW+ V
Sbjct: 243 SCLSFVDSVELACALKRLEDCKERLQLLYFAKKDMNDGFWSVV 285


>ref|NP_001175876.1| Os09g0468150 [Oryza sativa Japonica Group]
           gi|47497674|dbj|BAD19741.1| hypothetical protein [Oryza
           sativa Japonica Group] gi|125564054|gb|EAZ09434.1|
           hypothetical protein OsI_31706 [Oryza sativa Indica
           Group] gi|255678963|dbj|BAH94604.1| Os09g0468150 [Oryza
           sativa Japonica Group]
          Length = 333

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 34/100 (34%), Positives = 51/100 (51%), Gaps = 1/100 (1%)
 Frame = -3

Query: 363 LISELDLLVEIVEVMSRAPE-MAVVEGNNLVGEAVRLIEADRIAAXXXXXXXXXXXXXRT 187
           +I+EL     + + + +AP   +  + N L+ E +RL E DR+AA             R 
Sbjct: 176 VIAELSAYASVADAVRQAPPPSSAPQHNGLIWELIRLAEEDRVAAERNIAARVHEMGERL 235

Query: 186 TSLGFADSVELVCVLRRLEETRHRPWDRKPTIGDWFWTGV 67
            +L  AD+VELVCVLR++EE+   P        DW W G+
Sbjct: 236 ATLTLADAVELVCVLRQVEESTSSP-------ADWKWAGL 268


>gb|EEE69878.1| hypothetical protein OsJ_29693 [Oryza sativa Japonica Group]
          Length = 756

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 34/100 (34%), Positives = 51/100 (51%), Gaps = 1/100 (1%)
 Frame = -3

Query: 363 LISELDLLVEIVEVMSRAPE-MAVVEGNNLVGEAVRLIEADRIAAXXXXXXXXXXXXXRT 187
           +I+EL     + + + +AP   +  + N L+ E +RL E DR+AA             R 
Sbjct: 621 VIAELSAYASVADAVRQAPPPSSAPQHNGLIWELIRLAEEDRVAAERNIAARVHEMGERL 680

Query: 186 TSLGFADSVELVCVLRRLEETRHRPWDRKPTIGDWFWTGV 67
            +L  AD+VELVCVLR++EE+   P        DW W G+
Sbjct: 681 ATLTLADAVELVCVLRQVEESTSSP-------ADWKWAGL 713


>ref|XP_006661333.1| PREDICTED: putative clathrin assembly protein At4g40080-like [Oryza
           brachyantha]
          Length = 276

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 34/100 (34%), Positives = 50/100 (50%), Gaps = 1/100 (1%)
 Frame = -3

Query: 363 LISELDLLVEIVEVMSRAPE-MAVVEGNNLVGEAVRLIEADRIAAXXXXXXXXXXXXXRT 187
           LI+EL     + + + +AP   +  + N LV E +RL E DR+ A             R 
Sbjct: 118 LIAELAAFASVADAVRQAPPPSSAPQHNALVWELIRLAEEDRVTAEHNIAARVQEMSERL 177

Query: 186 TSLGFADSVELVCVLRRLEETRHRPWDRKPTIGDWFWTGV 67
            +L  AD+VELVCVL+++EE+   P        DW W G+
Sbjct: 178 ATLSLADAVELVCVLKQVEESASSP-------ADWKWAGL 210


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