BLASTX nr result
ID: Zingiber24_contig00032930
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00032930
(267 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003558514.1| PREDICTED: pentatricopeptide repeat-containi... 69 7e-10
gb|EMT09003.1| hypothetical protein F775_02099 [Aegilops tauschii] 69 8e-10
emb|CBI22283.3| unnamed protein product [Vitis vinifera] 67 2e-09
ref|XP_002279015.1| PREDICTED: pentatricopeptide repeat-containi... 67 2e-09
gb|EAY89012.1| hypothetical protein OsI_10494 [Oryza sativa Indi... 67 2e-09
ref|NP_001049349.1| Os03g0211600 [Oryza sativa Japonica Group] g... 67 2e-09
gb|ABF94602.1| expressed protein [Oryza sativa Japonica Group] g... 67 2e-09
gb|EOY03600.1| Pentatricopeptide repeat superfamily protein, put... 66 4e-09
ref|XP_002468297.1| hypothetical protein SORBIDRAFT_01g043190 [S... 65 9e-09
ref|NP_001168260.1| uncharacterized protein LOC100382024 [Zea ma... 65 9e-09
ref|XP_006649617.1| PREDICTED: pentatricopeptide repeat-containi... 65 1e-08
ref|XP_004985231.1| PREDICTED: pentatricopeptide repeat-containi... 65 1e-08
ref|XP_006837037.1| hypothetical protein AMTR_s00110p00040270 [A... 64 2e-08
gb|EXB77627.1| hypothetical protein L484_018143 [Morus notabilis] 64 3e-08
ref|XP_006395288.1| hypothetical protein EUTSA_v10003982mg [Eutr... 63 4e-08
ref|XP_002526074.1| pentatricopeptide repeat-containing protein,... 63 4e-08
ref|XP_002323888.2| hypothetical protein POPTR_0017s12620g [Popu... 63 5e-08
gb|EMJ16149.1| hypothetical protein PRUPE_ppa003127mg [Prunus pe... 62 6e-08
ref|XP_006602978.1| PREDICTED: pentatricopeptide repeat-containi... 62 8e-08
ref|XP_004304183.1| PREDICTED: pentatricopeptide repeat-containi... 62 8e-08
>ref|XP_003558514.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29290-like isoform 1 [Brachypodium distachyon]
gi|357113449|ref|XP_003558515.1| PREDICTED:
pentatricopeptide repeat-containing protein
At3g29290-like isoform 2 [Brachypodium distachyon]
gi|357113451|ref|XP_003558516.1| PREDICTED:
pentatricopeptide repeat-containing protein
At3g29290-like isoform 3 [Brachypodium distachyon]
Length = 574
Score = 68.9 bits (167), Expect = 7e-10
Identities = 34/63 (53%), Positives = 41/63 (65%)
Frame = +1
Query: 79 LHYLEEKDEEXXXXXXXXXXXXNKVKSALELFASMEASSLHPSSHACNSLLSSLARNGFL 258
LH+LEE+DEE NKV+SA ELF SM AS L P++HACNSLL+S R G+
Sbjct: 134 LHFLEERDEEILSRRLINLSKSNKVRSATELFDSMRASGLQPNAHACNSLLASFVRRGYS 193
Query: 259 KDA 267
DA
Sbjct: 194 TDA 196
>gb|EMT09003.1| hypothetical protein F775_02099 [Aegilops tauschii]
Length = 593
Score = 68.6 bits (166), Expect = 8e-10
Identities = 36/70 (51%), Positives = 43/70 (61%)
Frame = +1
Query: 58 FKLSKGGLHYLEEKDEEXXXXXXXXXXXXNKVKSALELFASMEASSLHPSSHACNSLLSS 237
F+ LH+LEE+DEE NKV+SA+ELF SM AS L P+SHACNSLL+S
Sbjct: 134 FEREGSRLHFLEERDEELLSRRLMKLSQFNKVRSAIELFDSMLASGLQPNSHACNSLLAS 193
Query: 238 LARNGFLKDA 267
R G DA
Sbjct: 194 FVRRGSSMDA 203
>emb|CBI22283.3| unnamed protein product [Vitis vinifera]
Length = 626
Score = 67.0 bits (162), Expect = 2e-09
Identities = 34/63 (53%), Positives = 41/63 (65%)
Frame = +1
Query: 79 LHYLEEKDEEXXXXXXXXXXXXNKVKSALELFASMEASSLHPSSHACNSLLSSLARNGFL 258
LH+LEE++E+ NKV+S LEL+ +ME S L PSSHACNSLLS L RN L
Sbjct: 173 LHFLEERNEQILSKRILMLSRSNKVRSVLELYRTMEFSGLQPSSHACNSLLSCLLRNEML 232
Query: 259 KDA 267
DA
Sbjct: 233 DDA 235
>ref|XP_002279015.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29290-like [Vitis vinifera]
Length = 546
Score = 67.0 bits (162), Expect = 2e-09
Identities = 34/63 (53%), Positives = 41/63 (65%)
Frame = +1
Query: 79 LHYLEEKDEEXXXXXXXXXXXXNKVKSALELFASMEASSLHPSSHACNSLLSSLARNGFL 258
LH+LEE++E+ NKV+S LEL+ +ME S L PSSHACNSLLS L RN L
Sbjct: 93 LHFLEERNEQILSKRILMLSRSNKVRSVLELYRTMEFSGLQPSSHACNSLLSCLLRNEML 152
Query: 259 KDA 267
DA
Sbjct: 153 DDA 155
>gb|EAY89012.1| hypothetical protein OsI_10494 [Oryza sativa Indica Group]
Length = 563
Score = 67.0 bits (162), Expect = 2e-09
Identities = 34/63 (53%), Positives = 39/63 (61%)
Frame = +1
Query: 79 LHYLEEKDEEXXXXXXXXXXXXNKVKSALELFASMEASSLHPSSHACNSLLSSLARNGFL 258
LH+LEE+DEE NKV+SA ELF SM AS L PS+HACNSLL+ R G
Sbjct: 144 LHFLEERDEEMLSRRLIKLSQSNKVRSATELFDSMRASGLQPSAHACNSLLACFVRRGSF 203
Query: 259 KDA 267
DA
Sbjct: 204 ADA 206
>ref|NP_001049349.1| Os03g0211600 [Oryza sativa Japonica Group]
gi|113547820|dbj|BAF11263.1| Os03g0211600, partial
[Oryza sativa Japonica Group]
Length = 429
Score = 67.0 bits (162), Expect = 2e-09
Identities = 34/63 (53%), Positives = 39/63 (61%)
Frame = +1
Query: 79 LHYLEEKDEEXXXXXXXXXXXXNKVKSALELFASMEASSLHPSSHACNSLLSSLARNGFL 258
LH+LEE+DEE NKV+SA ELF SM AS L PS+HACNSLL+ R G
Sbjct: 144 LHFLEERDEEMLSRRLIKLSQSNKVRSATELFDSMRASGLQPSAHACNSLLACFVRRGSF 203
Query: 259 KDA 267
DA
Sbjct: 204 ADA 206
>gb|ABF94602.1| expressed protein [Oryza sativa Japonica Group]
gi|125585367|gb|EAZ26031.1| hypothetical protein
OsJ_09884 [Oryza sativa Japonica Group]
Length = 582
Score = 67.0 bits (162), Expect = 2e-09
Identities = 34/63 (53%), Positives = 39/63 (61%)
Frame = +1
Query: 79 LHYLEEKDEEXXXXXXXXXXXXNKVKSALELFASMEASSLHPSSHACNSLLSSLARNGFL 258
LH+LEE+DEE NKV+SA ELF SM AS L PS+HACNSLL+ R G
Sbjct: 144 LHFLEERDEEMLSRRLIKLSQSNKVRSATELFDSMRASGLQPSAHACNSLLACFVRRGSF 203
Query: 259 KDA 267
DA
Sbjct: 204 ADA 206
>gb|EOY03600.1| Pentatricopeptide repeat superfamily protein, putative isoform 1
[Theobroma cacao] gi|508711704|gb|EOY03601.1|
Pentatricopeptide repeat superfamily protein, putative
isoform 1 [Theobroma cacao]
Length = 619
Score = 66.2 bits (160), Expect = 4e-09
Identities = 34/63 (53%), Positives = 41/63 (65%)
Frame = +1
Query: 79 LHYLEEKDEEXXXXXXXXXXXXNKVKSALELFASMEASSLHPSSHACNSLLSSLARNGFL 258
+H+LEE +EE NKV+SALEL SM+ S L PS+HACNSLLS L RNG +
Sbjct: 169 VHFLEETNEEELSRRVLMLSRSNKVRSALELCRSMKLSGLQPSAHACNSLLSCLLRNGLV 228
Query: 259 KDA 267
DA
Sbjct: 229 DDA 231
>ref|XP_002468297.1| hypothetical protein SORBIDRAFT_01g043190 [Sorghum bicolor]
gi|241922151|gb|EER95295.1| hypothetical protein
SORBIDRAFT_01g043190 [Sorghum bicolor]
Length = 581
Score = 65.1 bits (157), Expect = 9e-09
Identities = 34/63 (53%), Positives = 39/63 (61%)
Frame = +1
Query: 79 LHYLEEKDEEXXXXXXXXXXXXNKVKSALELFASMEASSLHPSSHACNSLLSSLARNGFL 258
LH+LEE+DEE NKV+SA ELF SM AS L PS+HACNSLL+ R L
Sbjct: 142 LHFLEERDEETLSRRLIKLSQNNKVRSATELFDSMRASGLQPSAHACNSLLACYVRRSPL 201
Query: 259 KDA 267
DA
Sbjct: 202 TDA 204
>ref|NP_001168260.1| uncharacterized protein LOC100382024 [Zea mays]
gi|223947083|gb|ACN27625.1| unknown [Zea mays]
gi|414865479|tpg|DAA44036.1| TPA: hypothetical protein
ZEAMMB73_641935 [Zea mays]
Length = 581
Score = 65.1 bits (157), Expect = 9e-09
Identities = 34/63 (53%), Positives = 39/63 (61%)
Frame = +1
Query: 79 LHYLEEKDEEXXXXXXXXXXXXNKVKSALELFASMEASSLHPSSHACNSLLSSLARNGFL 258
LH+LEE+DEE NKV+SA ELF SM AS L PS+HACNSLL+ R L
Sbjct: 142 LHFLEERDEETLSRRLIKLSQNNKVRSATELFDSMRASGLQPSAHACNSLLACYVRRSPL 201
Query: 259 KDA 267
DA
Sbjct: 202 ADA 204
>ref|XP_006649617.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29290-like [Oryza brachyantha]
Length = 570
Score = 64.7 bits (156), Expect = 1e-08
Identities = 32/63 (50%), Positives = 38/63 (60%)
Frame = +1
Query: 79 LHYLEEKDEEXXXXXXXXXXXXNKVKSALELFASMEASSLHPSSHACNSLLSSLARNGFL 258
LH+LEE+DEE NKV+SA ELF SM AS L PS+H CNSLL+ R +
Sbjct: 133 LHFLEERDEEMLSRRLIKLSQSNKVRSATELFDSMRASGLQPSAHGCNSLLACFVRKDYF 192
Query: 259 KDA 267
DA
Sbjct: 193 ADA 195
>ref|XP_004985231.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29290-like [Setaria italica]
Length = 583
Score = 64.7 bits (156), Expect = 1e-08
Identities = 36/71 (50%), Positives = 42/71 (59%), Gaps = 2/71 (2%)
Frame = +1
Query: 61 KLSKGG--LHYLEEKDEEXXXXXXXXXXXXNKVKSALELFASMEASSLHPSSHACNSLLS 234
K GG LH+LEE++EE NKV+SA ELF SM AS L PS+HACNSLL+
Sbjct: 136 KSEHGGSRLHFLEERNEETLSRRLIKLCQSNKVRSATELFDSMRASGLQPSAHACNSLLA 195
Query: 235 SLARNGFLKDA 267
R L DA
Sbjct: 196 CFVRRSSLADA 206
>ref|XP_006837037.1| hypothetical protein AMTR_s00110p00040270 [Amborella trichopoda]
gi|548839630|gb|ERM99890.1| hypothetical protein
AMTR_s00110p00040270 [Amborella trichopoda]
Length = 622
Score = 63.9 bits (154), Expect = 2e-08
Identities = 32/63 (50%), Positives = 40/63 (63%)
Frame = +1
Query: 79 LHYLEEKDEEXXXXXXXXXXXXNKVKSALELFASMEASSLHPSSHACNSLLSSLARNGFL 258
+H+LEE +EE NK+ SALEL+ SME SSL P+ H+CNSL+S L RN L
Sbjct: 158 MHFLEETNEESLSKRILVLSRSNKINSALELYMSMEMSSLQPNLHSCNSLISCLLRNNRL 217
Query: 259 KDA 267
DA
Sbjct: 218 DDA 220
>gb|EXB77627.1| hypothetical protein L484_018143 [Morus notabilis]
Length = 550
Score = 63.5 bits (153), Expect = 3e-08
Identities = 34/72 (47%), Positives = 40/72 (55%)
Frame = +1
Query: 49 KRLFKLSKGGLHYLEEKDEEXXXXXXXXXXXXNKVKSALELFASMEASSLHPSSHACNSL 228
K + L+ +H+LEE DE NKV+SALEL SME S L P HACNSL
Sbjct: 78 KAVLNLNVNSVHFLEEVDEAKLSNRILVLSRTNKVRSALELLRSMELSGLRPDLHACNSL 137
Query: 229 LSSLARNGFLKD 264
LS L RN + D
Sbjct: 138 LSCLLRNELVDD 149
>ref|XP_006395288.1| hypothetical protein EUTSA_v10003982mg [Eutrema salsugineum]
gi|557091927|gb|ESQ32574.1| hypothetical protein
EUTSA_v10003982mg [Eutrema salsugineum]
Length = 528
Score = 63.2 bits (152), Expect = 4e-08
Identities = 31/61 (50%), Positives = 40/61 (65%)
Frame = +1
Query: 79 LHYLEEKDEEXXXXXXXXXXXXNKVKSALELFASMEASSLHPSSHACNSLLSSLARNGFL 258
+H+LEE++EE NKV+SA+ELF SM L P++HACNSLLS L RNG L
Sbjct: 88 IHFLEERNEEMLSKRLLKLSRLNKVRSAMELFDSMRTLGLQPNAHACNSLLSCLLRNGNL 147
Query: 259 K 261
+
Sbjct: 148 Q 148
>ref|XP_002526074.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223534571|gb|EEF36268.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 285
Score = 63.2 bits (152), Expect = 4e-08
Identities = 34/73 (46%), Positives = 41/73 (56%)
Frame = +1
Query: 49 KRLFKLSKGGLHYLEEKDEEXXXXXXXXXXXXNKVKSALELFASMEASSLHPSSHACNSL 228
+ L + +H LEE +EE NKV+SALELF SME S L P+SHACNS
Sbjct: 72 RNTISLDESRVHLLEEGNEEELSRRILMLSRSNKVRSALELFRSMEFSGLRPNSHACNSF 131
Query: 229 LSSLARNGFLKDA 267
+S L RN L A
Sbjct: 132 ISCLLRNKLLDHA 144
>ref|XP_002323888.2| hypothetical protein POPTR_0017s12620g [Populus trichocarpa]
gi|550320141|gb|EEF04021.2| hypothetical protein
POPTR_0017s12620g [Populus trichocarpa]
Length = 716
Score = 62.8 bits (151), Expect = 5e-08
Identities = 36/85 (42%), Positives = 47/85 (55%)
Frame = +1
Query: 13 ENIEQSPSCRKFKRLFKLSKGGLHYLEEKDEEXXXXXXXXXXXXNKVKSALELFASMEAS 192
E I QSPS +++ +H+LEE DE NK++SAL+L SME S
Sbjct: 248 EKIVQSPSL--LNNRVTVNESRVHFLEETDENELSRRILMLSRSNKIRSALQLLRSMEFS 305
Query: 193 SLHPSSHACNSLLSSLARNGFLKDA 267
L P+ HACNSLLS L R+ +DA
Sbjct: 306 GLQPNRHACNSLLSCLIRHELHEDA 330
>gb|EMJ16149.1| hypothetical protein PRUPE_ppa003127mg [Prunus persica]
Length = 601
Score = 62.4 bits (150), Expect = 6e-08
Identities = 38/80 (47%), Positives = 43/80 (53%)
Frame = +1
Query: 25 QSPSCRKFKRLFKLSKGGLHYLEEKDEEXXXXXXXXXXXXNKVKSALELFASMEASSLHP 204
Q SC KR L+ + +LEE DE NK +SALELF SME S L P
Sbjct: 127 QPESC--LKRKASLNVNRVSFLEEMDEGTLSKRILVLSRTNKTRSALELFTSMELSGLLP 184
Query: 205 SSHACNSLLSSLARNGFLKD 264
+ HACNSLLS L RN L D
Sbjct: 185 NLHACNSLLSCLLRNELLDD 204
>ref|XP_006602978.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29290-like isoform X2 [Glycine max]
Length = 748
Score = 62.0 bits (149), Expect = 8e-08
Identities = 31/64 (48%), Positives = 41/64 (64%)
Frame = +1
Query: 64 LSKGGLHYLEEKDEEXXXXXXXXXXXXNKVKSALELFASMEASSLHPSSHACNSLLSSLA 243
L++ G+ +LEE DE NK++SA+E F SME S L P+ HACNSL+SSL
Sbjct: 304 LNEHGVLFLEELDENVLSNRILVLSRTNKIRSAMEYFRSMELSGLSPNIHACNSLISSLL 363
Query: 244 RNGF 255
RNG+
Sbjct: 364 RNGW 367
>ref|XP_004304183.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29290-like [Fragaria vesca subsp. vesca]
Length = 588
Score = 62.0 bits (149), Expect = 8e-08
Identities = 34/58 (58%), Positives = 36/58 (62%)
Frame = +1
Query: 85 YLEEKDEEXXXXXXXXXXXXNKVKSALELFASMEASSLHPSSHACNSLLSSLARNGFL 258
+LEE DEE NK +SALELF SME S L S HACNSLLS L RNGFL
Sbjct: 130 FLEEVDEETLSKRILVLSRTNKFRSALELFTSMELSGLVSSLHACNSLLSCLLRNGFL 187