BLASTX nr result
ID: Zingiber24_contig00032899
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00032899
(452 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006653556.1| PREDICTED: DNA-directed RNA polymerase III s... 194 1e-47
gb|EEE61245.1| hypothetical protein OsJ_15297 [Oryza sativa Japo... 194 1e-47
ref|NP_001053175.1| Os04g0492300 [Oryza sativa Japonica Group] g... 194 1e-47
ref|XP_002446717.1| hypothetical protein SORBIDRAFT_06g021120 [S... 191 8e-47
ref|XP_004976057.1| PREDICTED: DNA-directed RNA polymerase III s... 190 2e-46
tpg|DAA37177.1| TPA: putative DNA-directed RNA polymerase family... 190 2e-46
gb|EMT01541.1| DNA-directed RNA polymerase III subunit RPC1 [Aeg... 187 9e-46
gb|EMS65169.1| DNA-directed RNA polymerase III subunit rpc1 [Tri... 187 9e-46
ref|XP_003574945.1| PREDICTED: DNA-directed RNA polymerase III s... 184 1e-44
gb|EMT10482.1| DNA-directed RNA polymerase III subunit RPC1 [Aeg... 182 5e-44
gb|EMS65535.1| DNA-directed RNA polymerase III subunit RPC1 [Tri... 181 9e-44
ref|XP_002985715.1| hypothetical protein SELMODRAFT_446351 [Sela... 180 2e-43
emb|CBI16226.3| unnamed protein product [Vitis vinifera] 179 4e-43
ref|XP_002284657.1| PREDICTED: DNA-directed RNA polymerase III s... 179 4e-43
ref|XP_004148776.1| PREDICTED: DNA-directed RNA polymerase III s... 178 6e-43
ref|XP_006828249.1| hypothetical protein AMTR_s00023p00196820 [A... 176 3e-42
ref|XP_001757221.1| predicted protein [Physcomitrella patens] gi... 175 6e-42
ref|XP_002974416.1| hypothetical protein SELMODRAFT_442419 [Sela... 174 8e-42
ref|XP_003570766.1| PREDICTED: DNA-directed RNA polymerase III s... 173 2e-41
gb|EXB53229.1| DNA-directed RNA polymerase III subunit RPC1 [Mor... 171 1e-40
>ref|XP_006653556.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Oryza
brachyantha]
Length = 1389
Score = 194 bits (493), Expect = 1e-47
Identities = 99/150 (66%), Positives = 117/150 (78%)
Frame = +2
Query: 2 PKIKLKEEHVCSVRHDKSKIYTPEVDRRKLLSELHNLKSMLPKVVVKGIPSVERAIIXXX 181
P+IKLK EHV + K ++Y +D+ KLL ELHNLKSMLPKV+VKGIP+VERA+I
Sbjct: 1168 PRIKLKSEHVRVIDKAKLRVYPTAIDKSKLLYELHNLKSMLPKVIVKGIPTVERAVISQT 1227
Query: 182 XXXXXXXXXYSLLVEGTNLLGVMGTQGIDGRKTTSNHVIEVQQTLGIEAARKCIVNEIQY 361
YSLLVEGTNLL VMGT G+D KT SNH++EV +TLGIEAAR+ I++EIQY
Sbjct: 1228 GDK------YSLLVEGTNLLAVMGTPGVDAMKTKSNHIMEVNRTLGIEAARRSIIDEIQY 1281
Query: 362 TMRSHGMSIDLRHMMLLADLMTYKGEVLGI 451
TM SHGM+ID RHMMLLADLMTYKGE+LGI
Sbjct: 1282 TMTSHGMNIDSRHMMLLADLMTYKGEILGI 1311
>gb|EEE61245.1| hypothetical protein OsJ_15297 [Oryza sativa Japonica Group]
Length = 1321
Score = 194 bits (492), Expect = 1e-47
Identities = 99/150 (66%), Positives = 117/150 (78%)
Frame = +2
Query: 2 PKIKLKEEHVCSVRHDKSKIYTPEVDRRKLLSELHNLKSMLPKVVVKGIPSVERAIIXXX 181
PKIKLK EHV + K +IY +D+ KLL ELH+LKSMLPKV+VKGIP+VERA+I
Sbjct: 1096 PKIKLKSEHVRVIDKSKLRIYPAGIDKSKLLYELHHLKSMLPKVIVKGIPTVERAVISET 1155
Query: 182 XXXXXXXXXYSLLVEGTNLLGVMGTQGIDGRKTTSNHVIEVQQTLGIEAARKCIVNEIQY 361
Y LLVEGTNLL VMGT G+D KT SNH++EV +TLGIEAAR+ I++EIQY
Sbjct: 1156 GEENDKR--YKLLVEGTNLLAVMGTPGVDAMKTKSNHIMEVNRTLGIEAARRSIIDEIQY 1213
Query: 362 TMRSHGMSIDLRHMMLLADLMTYKGEVLGI 451
TM+SHGM+ID RHMMLLADLMTYKGE+LGI
Sbjct: 1214 TMKSHGMNIDSRHMMLLADLMTYKGEILGI 1243
>ref|NP_001053175.1| Os04g0492300 [Oryza sativa Japonica Group]
gi|38346223|emb|CAE02045.2| OJ990528_30.3 [Oryza sativa
Japonica Group] gi|38347455|emb|CAD41360.2|
OSJNBa0076N16.24 [Oryza sativa Japonica Group]
gi|113564746|dbj|BAF15089.1| Os04g0492300 [Oryza sativa
Japonica Group] gi|116310339|emb|CAH67354.1|
OSIGBa0130B08.14 [Oryza sativa Indica Group]
gi|116310740|emb|CAH67535.1| H0425E08.3 [Oryza sativa
Indica Group] gi|215768005|dbj|BAH00234.1| unnamed
protein product [Oryza sativa Japonica Group]
gi|218195112|gb|EEC77539.1| hypothetical protein
OsI_16437 [Oryza sativa Indica Group]
Length = 1383
Score = 194 bits (492), Expect = 1e-47
Identities = 99/150 (66%), Positives = 117/150 (78%)
Frame = +2
Query: 2 PKIKLKEEHVCSVRHDKSKIYTPEVDRRKLLSELHNLKSMLPKVVVKGIPSVERAIIXXX 181
PKIKLK EHV + K +IY +D+ KLL ELH+LKSMLPKV+VKGIP+VERA+I
Sbjct: 1158 PKIKLKSEHVRVIDKSKLRIYPAGIDKSKLLYELHHLKSMLPKVIVKGIPTVERAVISET 1217
Query: 182 XXXXXXXXXYSLLVEGTNLLGVMGTQGIDGRKTTSNHVIEVQQTLGIEAARKCIVNEIQY 361
Y LLVEGTNLL VMGT G+D KT SNH++EV +TLGIEAAR+ I++EIQY
Sbjct: 1218 GEENDKR--YKLLVEGTNLLAVMGTPGVDAMKTKSNHIMEVNRTLGIEAARRSIIDEIQY 1275
Query: 362 TMRSHGMSIDLRHMMLLADLMTYKGEVLGI 451
TM+SHGM+ID RHMMLLADLMTYKGE+LGI
Sbjct: 1276 TMKSHGMNIDSRHMMLLADLMTYKGEILGI 1305
>ref|XP_002446717.1| hypothetical protein SORBIDRAFT_06g021120 [Sorghum bicolor]
gi|241937900|gb|EES11045.1| hypothetical protein
SORBIDRAFT_06g021120 [Sorghum bicolor]
Length = 1391
Score = 191 bits (485), Expect = 8e-47
Identities = 98/150 (65%), Positives = 114/150 (76%)
Frame = +2
Query: 2 PKIKLKEEHVCSVRHDKSKIYTPEVDRRKLLSELHNLKSMLPKVVVKGIPSVERAIIXXX 181
PKIKLK EHV + K +IY D+RKL ELHNLKS+LPKV+VKGIP+VER +I
Sbjct: 1165 PKIKLKSEHVRVIDRAKLRIYPAGTDKRKLQLELHNLKSILPKVIVKGIPTVERVVIDEV 1224
Query: 182 XXXXXXXXXYSLLVEGTNLLGVMGTQGIDGRKTTSNHVIEVQQTLGIEAARKCIVNEIQY 361
Y LLVEGTNLL VMGT G+D KT SNH++E QTLGIEAAR+ I++EIQY
Sbjct: 1225 KVKNETER-YQLLVEGTNLLAVMGTPGVDATKTKSNHIMETNQTLGIEAARRSIIDEIQY 1283
Query: 362 TMRSHGMSIDLRHMMLLADLMTYKGEVLGI 451
TM+SHGM+ID RHMMLLADLMTYKGE+LGI
Sbjct: 1284 TMKSHGMNIDRRHMMLLADLMTYKGEILGI 1313
>ref|XP_004976057.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Setaria
italica]
Length = 1397
Score = 190 bits (482), Expect = 2e-46
Identities = 97/150 (64%), Positives = 115/150 (76%)
Frame = +2
Query: 2 PKIKLKEEHVCSVRHDKSKIYTPEVDRRKLLSELHNLKSMLPKVVVKGIPSVERAIIXXX 181
PKIKLK EHV + K +IY D+ KL ELHNLK+MLPKV+VKGIP+VER +I
Sbjct: 1171 PKIKLKSEHVRVIDRAKLRIYPAGTDKSKLQLELHNLKAMLPKVIVKGIPTVERVVIDER 1230
Query: 182 XXXXXXXXXYSLLVEGTNLLGVMGTQGIDGRKTTSNHVIEVQQTLGIEAARKCIVNEIQY 361
Y+LLVEGTNLL VMGT G+D R T SNH++E+ TLGIEAAR+ I++EIQY
Sbjct: 1231 KKEGKLEK-YNLLVEGTNLLAVMGTPGVDARNTKSNHIMEMNSTLGIEAARRSIIDEIQY 1289
Query: 362 TMRSHGMSIDLRHMMLLADLMTYKGEVLGI 451
TM+SHGM+ID+RHMMLLADLMTYKGEVLGI
Sbjct: 1290 TMKSHGMNIDVRHMMLLADLMTYKGEVLGI 1319
>tpg|DAA37177.1| TPA: putative DNA-directed RNA polymerase family protein [Zea mays]
Length = 336
Score = 190 bits (482), Expect = 2e-46
Identities = 97/150 (64%), Positives = 114/150 (76%)
Frame = +2
Query: 2 PKIKLKEEHVCSVRHDKSKIYTPEVDRRKLLSELHNLKSMLPKVVVKGIPSVERAIIXXX 181
PK+KLK EHV + K +IY D+ KL ELHNLKS+LPKV+VKGIP+VER +I
Sbjct: 110 PKLKLKSEHVRVIDRAKLRIYPAGTDKLKLQLELHNLKSILPKVIVKGIPTVERVVIDEV 169
Query: 182 XXXXXXXXXYSLLVEGTNLLGVMGTQGIDGRKTTSNHVIEVQQTLGIEAARKCIVNEIQY 361
Y LLVEGTNLL VMGT G+D RKT SNH++E QTLGIEAAR+ I++EIQY
Sbjct: 170 KVNNATER-YQLLVEGTNLLAVMGTPGVDARKTKSNHIMETNQTLGIEAARRSIIDEIQY 228
Query: 362 TMRSHGMSIDLRHMMLLADLMTYKGEVLGI 451
TM+SHGM+ID RHMMLLADLMTYKGE+LGI
Sbjct: 229 TMKSHGMNIDRRHMMLLADLMTYKGEILGI 258
>gb|EMT01541.1| DNA-directed RNA polymerase III subunit RPC1 [Aegilops tauschii]
Length = 1117
Score = 187 bits (476), Expect = 9e-46
Identities = 95/150 (63%), Positives = 112/150 (74%)
Frame = +2
Query: 2 PKIKLKEEHVCSVRHDKSKIYTPEVDRRKLLSELHNLKSMLPKVVVKGIPSVERAIIXXX 181
PK+KLK +HV + K +IY DR KL ELHNLKSMLPKV+VKGIP+VERA++
Sbjct: 889 PKLKLKSQHVRVIDEAKLRIYPDGTDRSKLQFELHNLKSMLPKVIVKGIPTVERAVVNPV 948
Query: 182 XXXXXXXXXYSLLVEGTNLLGVMGTQGIDGRKTTSNHVIEVQQTLGIEAARKCIVNEIQY 361
Y+LLVEGTNLL V+G G+D KT SNH++EV QTLGIEAAR+ I++EIQY
Sbjct: 949 KGRDKTIERYNLLVEGTNLLAVLGAPGVDAMKTKSNHIMEVNQTLGIEAARRSIIDEIQY 1008
Query: 362 TMRSHGMSIDLRHMMLLADLMTYKGEVLGI 451
T S+ M IDLRHMMLLADLMTYKGEVLGI
Sbjct: 1009 TFESNNMIIDLRHMMLLADLMTYKGEVLGI 1038
>gb|EMS65169.1| DNA-directed RNA polymerase III subunit rpc1 [Triticum urartu]
Length = 1248
Score = 187 bits (476), Expect = 9e-46
Identities = 95/150 (63%), Positives = 112/150 (74%)
Frame = +2
Query: 2 PKIKLKEEHVCSVRHDKSKIYTPEVDRRKLLSELHNLKSMLPKVVVKGIPSVERAIIXXX 181
PK+KLK +HV + K +IY DR KL ELHNLKSMLPKV+VKGIP+VERA++
Sbjct: 1020 PKLKLKSQHVRVIDEAKLRIYPDGTDRSKLQFELHNLKSMLPKVIVKGIPTVERAVVNPV 1079
Query: 182 XXXXXXXXXYSLLVEGTNLLGVMGTQGIDGRKTTSNHVIEVQQTLGIEAARKCIVNEIQY 361
Y+LLVEGTNLL V+G G+D KT SNH++EV QTLGIEAAR+ I++EIQY
Sbjct: 1080 KGRDKTIERYNLLVEGTNLLAVLGAPGVDAMKTKSNHIMEVNQTLGIEAARRSIIDEIQY 1139
Query: 362 TMRSHGMSIDLRHMMLLADLMTYKGEVLGI 451
T S+ M IDLRHMMLLADLMTYKGEVLGI
Sbjct: 1140 TFESNNMIIDLRHMMLLADLMTYKGEVLGI 1169
>ref|XP_003574945.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like
[Brachypodium distachyon]
Length = 1392
Score = 184 bits (466), Expect = 1e-44
Identities = 94/150 (62%), Positives = 112/150 (74%)
Frame = +2
Query: 2 PKIKLKEEHVCSVRHDKSKIYTPEVDRRKLLSELHNLKSMLPKVVVKGIPSVERAIIXXX 181
PKIKLK EHV + K +IY D+ KL ELH LKSMLPKV+VKGIP+VERA++
Sbjct: 1165 PKIKLKSEHVRVIDGAKLRIYPTGTDKSKLQLELHTLKSMLPKVIVKGIPTVERAVVNPV 1224
Query: 182 XXXXXXXXXYSLLVEGTNLLGVMGTQGIDGRKTTSNHVIEVQQTLGIEAARKCIVNEIQY 361
Y+LLVEGTNLL V+GT G+D +KT SNH++EV QTLGIEAAR+ I++EI+Y
Sbjct: 1225 KRPDKTLDRYNLLVEGTNLLKVLGTPGVDAKKTKSNHIMEVNQTLGIEAARRSIIDEIRY 1284
Query: 362 TMRSHGMSIDLRHMMLLADLMTYKGEVLGI 451
T S+ M ID RHMMLLADLMTYKGEVLGI
Sbjct: 1285 TFESNNMIIDQRHMMLLADLMTYKGEVLGI 1314
>gb|EMT10482.1| DNA-directed RNA polymerase III subunit RPC1 [Aegilops tauschii]
Length = 832
Score = 182 bits (461), Expect = 5e-44
Identities = 90/150 (60%), Positives = 113/150 (75%)
Frame = +2
Query: 2 PKIKLKEEHVCSVRHDKSKIYTPEVDRRKLLSELHNLKSMLPKVVVKGIPSVERAIIXXX 181
PKIKLK EHV + K +IY D+ KL ELHNLKSMLPK++VKGI +VERA++
Sbjct: 605 PKIKLKSEHVRVIDETKLRIYPTGTDKSKLQLELHNLKSMLPKLIVKGISTVERAVVNPV 664
Query: 182 XXXXXXXXXYSLLVEGTNLLGVMGTQGIDGRKTTSNHVIEVQQTLGIEAARKCIVNEIQY 361
Y+LLVEGTNLL V+GT G+D ++T SNH++EV +TLGIEAAR+ I++EI+Y
Sbjct: 665 LRRDGTFDRYNLLVEGTNLLKVLGTPGVDAKRTKSNHILEVNKTLGIEAARRSIIDEIRY 724
Query: 362 TMRSHGMSIDLRHMMLLADLMTYKGEVLGI 451
T ++ M IDLRHMMLLADLMTYKGE+LGI
Sbjct: 725 TFENNNMMIDLRHMMLLADLMTYKGEILGI 754
>gb|EMS65535.1| DNA-directed RNA polymerase III subunit RPC1 [Triticum urartu]
Length = 689
Score = 181 bits (459), Expect = 9e-44
Identities = 90/150 (60%), Positives = 113/150 (75%)
Frame = +2
Query: 2 PKIKLKEEHVCSVRHDKSKIYTPEVDRRKLLSELHNLKSMLPKVVVKGIPSVERAIIXXX 181
PKIKLK EHV + K +IY D+ KL ELHNLKSMLPK++VKGI SVERA++
Sbjct: 462 PKIKLKSEHVRVIDEAKLRIYPTGKDKSKLQLELHNLKSMLPKLIVKGISSVERAVVNPV 521
Query: 182 XXXXXXXXXYSLLVEGTNLLGVMGTQGIDGRKTTSNHVIEVQQTLGIEAARKCIVNEIQY 361
Y+LLVEGTNL+ V+GT G+D ++T SNH++EV +TLGIEAAR+ I++EI+Y
Sbjct: 522 LRRDGTFDRYNLLVEGTNLMKVLGTPGVDAKRTKSNHILEVNKTLGIEAARRSIIDEIRY 581
Query: 362 TMRSHGMSIDLRHMMLLADLMTYKGEVLGI 451
T ++ M IDLRHMMLLADLMTYKGE+LGI
Sbjct: 582 TFENNNMMIDLRHMMLLADLMTYKGEILGI 611
>ref|XP_002985715.1| hypothetical protein SELMODRAFT_446351 [Selaginella moellendorffii]
gi|300146624|gb|EFJ13293.1| hypothetical protein
SELMODRAFT_446351 [Selaginella moellendorffii]
Length = 1393
Score = 180 bits (456), Expect = 2e-43
Identities = 97/154 (62%), Positives = 118/154 (76%), Gaps = 4/154 (2%)
Frame = +2
Query: 2 PKIK---LKEEHVCSVRHDKS-KIYTPEVDRRKLLSELHNLKSMLPKVVVKGIPSVERAI 169
PKIK LKE+HV V D+S + TPE DR+K+L LH+L++MLPKV+VKGIP+VERA+
Sbjct: 1169 PKIKSMKLKEQHV-KVNDDRSISLTTPESDRKKMLFALHSLQNMLPKVIVKGIPTVERAV 1227
Query: 170 IXXXXXXXXXXXXYSLLVEGTNLLGVMGTQGIDGRKTTSNHVIEVQQTLGIEAARKCIVN 349
I Y+LLVEGTNL VMGT+G+DGR+TTSNH+ E + LGIEAAR I+
Sbjct: 1228 INQEKGK------YNLLVEGTNLKAVMGTEGVDGRETTSNHIFETVEVLGIEAARNGIIK 1281
Query: 350 EIQYTMRSHGMSIDLRHMMLLADLMTYKGEVLGI 451
EIQYTM SHGMSID RHMMLLAD+MTY+GE+LGI
Sbjct: 1282 EIQYTMGSHGMSIDQRHMMLLADVMTYRGEILGI 1315
>emb|CBI16226.3| unnamed protein product [Vitis vinifera]
Length = 1819
Score = 179 bits (453), Expect = 4e-43
Identities = 94/149 (63%), Positives = 117/149 (78%)
Frame = +2
Query: 5 KIKLKEEHVCSVRHDKSKIYTPEVDRRKLLSELHNLKSMLPKVVVKGIPSVERAIIXXXX 184
+IKLK++H+ + K +++ P+ DR + ELH LK++LP VVVKGI +VERA+I
Sbjct: 1599 RIKLKQQHIKVLDAGKLEVH-PQGDRSTIHFELHALKNLLPTVVVKGIETVERAVINKDN 1657
Query: 185 XXXXXXXXYSLLVEGTNLLGVMGTQGIDGRKTTSNHVIEVQQTLGIEAARKCIVNEIQYT 364
Y+LLVEGT L VMGT+G+ GR+TTSNH+IEVQQTLGIEAARKCI+NEIQYT
Sbjct: 1658 KVK-----YNLLVEGTGLQTVMGTEGVIGRETTSNHIIEVQQTLGIEAARKCIINEIQYT 1712
Query: 365 MRSHGMSIDLRHMMLLADLMTYKGEVLGI 451
M SHGMSID+RHMMLLADLMT++GEVLGI
Sbjct: 1713 MASHGMSIDIRHMMLLADLMTFRGEVLGI 1741
>ref|XP_002284657.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Vitis
vinifera]
Length = 1383
Score = 179 bits (453), Expect = 4e-43
Identities = 94/149 (63%), Positives = 117/149 (78%)
Frame = +2
Query: 5 KIKLKEEHVCSVRHDKSKIYTPEVDRRKLLSELHNLKSMLPKVVVKGIPSVERAIIXXXX 184
+IKLK++H+ + K +++ P+ DR + ELH LK++LP VVVKGI +VERA+I
Sbjct: 1163 RIKLKQQHIKVLDAGKLEVH-PQGDRSTIHFELHALKNLLPTVVVKGIETVERAVINKDN 1221
Query: 185 XXXXXXXXYSLLVEGTNLLGVMGTQGIDGRKTTSNHVIEVQQTLGIEAARKCIVNEIQYT 364
Y+LLVEGT L VMGT+G+ GR+TTSNH+IEVQQTLGIEAARKCI+NEIQYT
Sbjct: 1222 KVK-----YNLLVEGTGLQTVMGTEGVIGRETTSNHIIEVQQTLGIEAARKCIINEIQYT 1276
Query: 365 MRSHGMSIDLRHMMLLADLMTYKGEVLGI 451
M SHGMSID+RHMMLLADLMT++GEVLGI
Sbjct: 1277 MASHGMSIDIRHMMLLADLMTFRGEVLGI 1305
>ref|XP_004148776.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Cucumis
sativus]
Length = 1400
Score = 178 bits (452), Expect = 6e-43
Identities = 91/150 (60%), Positives = 109/150 (72%)
Frame = +2
Query: 2 PKIKLKEEHVCSVRHDKSKIYTPEVDRRKLLSELHNLKSMLPKVVVKGIPSVERAIIXXX 181
PK+KLK EH+ + K ++ + DR KL LH LK+MLP VVVKGI +V RA+I
Sbjct: 1173 PKLKLKHEHINVLDDRKLRVLPQDADRNKLHFNLHFLKNMLPGVVVKGIKTVGRAVIKEE 1232
Query: 182 XXXXXXXXXYSLLVEGTNLLGVMGTQGIDGRKTTSNHVIEVQQTLGIEAARKCIVNEIQY 361
+SLLVEGT L VMGT+G+DG T SNH+IEVQQ LGIEAARKCI+ EI+Y
Sbjct: 1233 KDKARNAKKFSLLVEGTGLQAVMGTEGVDGCNTKSNHIIEVQQVLGIEAARKCIIEEIKY 1292
Query: 362 TMRSHGMSIDLRHMMLLADLMTYKGEVLGI 451
TM SHGMSID+RHMMLL DLMT++GEVLGI
Sbjct: 1293 TMESHGMSIDIRHMMLLGDLMTFRGEVLGI 1322
>ref|XP_006828249.1| hypothetical protein AMTR_s00023p00196820 [Amborella trichopoda]
gi|548832896|gb|ERM95665.1| hypothetical protein
AMTR_s00023p00196820 [Amborella trichopoda]
Length = 1383
Score = 176 bits (446), Expect = 3e-42
Identities = 89/135 (65%), Positives = 109/135 (80%)
Frame = +2
Query: 47 DKSKIYTPEVDRRKLLSELHNLKSMLPKVVVKGIPSVERAIIXXXXXXXXXXXXYSLLVE 226
DK KI PE+ R+++L LH L+S+LPK++VKGIP+VERA+I +LLVE
Sbjct: 1177 DKLKILLPEIGRKEVLYSLHLLQSLLPKIIVKGIPTVERAVINNVKGKL------NLLVE 1230
Query: 227 GTNLLGVMGTQGIDGRKTTSNHVIEVQQTLGIEAARKCIVNEIQYTMRSHGMSIDLRHMM 406
GTNLL VMGT G+DGR TTSNH++EV+ TLGIEAARK I++EIQYTM+SHGMSIDLRHMM
Sbjct: 1231 GTNLLAVMGTPGVDGRNTTSNHIVEVEGTLGIEAARKSIIDEIQYTMKSHGMSIDLRHMM 1290
Query: 407 LLADLMTYKGEVLGI 451
LLADLMT++G VLGI
Sbjct: 1291 LLADLMTFRGLVLGI 1305
>ref|XP_001757221.1| predicted protein [Physcomitrella patens] gi|162691719|gb|EDQ78080.1|
predicted protein [Physcomitrella patens]
Length = 1397
Score = 175 bits (443), Expect = 6e-42
Identities = 93/150 (62%), Positives = 111/150 (74%)
Frame = +2
Query: 2 PKIKLKEEHVCSVRHDKSKIYTPEVDRRKLLSELHNLKSMLPKVVVKGIPSVERAIIXXX 181
PKIKLK ++ V DK + P+ D+ KL LH+L +MLPKV+VKGIPSVERA+I
Sbjct: 1176 PKIKLKHVNIRIVDRDKLIVIPPDQDKGKLYFYLHSLCNMLPKVIVKGIPSVERAVINKE 1235
Query: 182 XXXXXXXXXYSLLVEGTNLLGVMGTQGIDGRKTTSNHVIEVQQTLGIEAARKCIVNEIQY 361
Y+LLVEGTNL VMG G++G+ T SNHVIE +QTLGIEAAR I++EIQY
Sbjct: 1236 KGV------YNLLVEGTNLKAVMGISGVNGKLTKSNHVIEAEQTLGIEAARNVIIDEIQY 1289
Query: 362 TMRSHGMSIDLRHMMLLADLMTYKGEVLGI 451
TM SHGM+ID RHMMLLAD+MTYKGEVLGI
Sbjct: 1290 TMGSHGMTIDARHMMLLADVMTYKGEVLGI 1319
>ref|XP_002974416.1| hypothetical protein SELMODRAFT_442419 [Selaginella moellendorffii]
gi|300158014|gb|EFJ24638.1| hypothetical protein
SELMODRAFT_442419 [Selaginella moellendorffii]
Length = 1348
Score = 174 bits (442), Expect = 8e-42
Identities = 95/153 (62%), Positives = 115/153 (75%), Gaps = 4/153 (2%)
Frame = +2
Query: 2 PKIK---LKEEHVCSVRHDKS-KIYTPEVDRRKLLSELHNLKSMLPKVVVKGIPSVERAI 169
PKIK LKE+HV V D+S + TPE DR+K+L LH+L++MLPKV+VKGIP+VERA+
Sbjct: 1173 PKIKSMKLKEQHV-KVNDDRSISLTTPESDRKKMLFALHSLQNMLPKVIVKGIPTVERAV 1231
Query: 170 IXXXXXXXXXXXXYSLLVEGTNLLGVMGTQGIDGRKTTSNHVIEVQQTLGIEAARKCIVN 349
I Y+LLVEGTNL VMGT+G+DGR+TTSNH+ E + LGIEAAR I+
Sbjct: 1232 INQEKGK------YNLLVEGTNLKAVMGTEGVDGRETTSNHIFETVEVLGIEAARNGIIK 1285
Query: 350 EIQYTMRSHGMSIDLRHMMLLADLMTYKGEVLG 448
EIQYTM SHGMSID RHMMLLAD+MTY+GE G
Sbjct: 1286 EIQYTMGSHGMSIDQRHMMLLADVMTYRGEFWG 1318
>ref|XP_003570766.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like
[Brachypodium distachyon]
Length = 1400
Score = 173 bits (438), Expect = 2e-41
Identities = 87/147 (59%), Positives = 109/147 (74%)
Frame = +2
Query: 5 KIKLKEEHVCSVRHDKSKIYTPEVDRRKLLSELHNLKSMLPKVVVKGIPSVERAIIXXXX 184
++KL EHVC V K +I+ + LL ELHNLKSMLPKV+VKGIP+VERA++
Sbjct: 1173 ELKLTSEHVCVVDQAKLRIHAAGKGKSGLLLELHNLKSMLPKVIVKGIPTVERAVVNPVF 1232
Query: 185 XXXXXXXXYSLLVEGTNLLGVMGTQGIDGRKTTSNHVIEVQQTLGIEAARKCIVNEIQYT 364
Y+LLVEGTNLL V+GT G+D +KT SNH++EV QTLGIEAAR+ I++EI+YT
Sbjct: 1233 RHDKTFDRYNLLVEGTNLLAVLGTPGVDAKKTKSNHIMEVSQTLGIEAARRSIIDEIRYT 1292
Query: 365 MRSHGMSIDLRHMMLLADLMTYKGEVL 445
++ M IDLRHMMLLAD+MT KGEVL
Sbjct: 1293 FENNNMMIDLRHMMLLADVMTSKGEVL 1319
>gb|EXB53229.1| DNA-directed RNA polymerase III subunit RPC1 [Morus notabilis]
Length = 1179
Score = 171 bits (432), Expect = 1e-40
Identities = 90/151 (59%), Positives = 110/151 (72%), Gaps = 1/151 (0%)
Frame = +2
Query: 2 PKIKLKEEHVCSVRHDKSKIYTPEVDRRKLLSELHNLKSMLPKVVVKGIPSVERAIIXXX 181
P+IKLK+EH+ + K +I E +R KL L L ML ++VKGI +VERA+I
Sbjct: 950 PRIKLKKEHIRVLDFKKLEILPYESNRSKLYHHLQFLAKMLQNILVKGIKTVERAVISSE 1009
Query: 182 XXXXXXXXX-YSLLVEGTNLLGVMGTQGIDGRKTTSNHVIEVQQTLGIEAARKCIVNEIQ 358
Y LLVEGT LLGVMGT+G+DGR T +NH+IEVQQTLGIEAAR CI++EI+
Sbjct: 1010 KDKKTDISKKYKLLVEGTGLLGVMGTEGVDGRNTKTNHIIEVQQTLGIEAARTCIIDEIE 1069
Query: 359 YTMRSHGMSIDLRHMMLLADLMTYKGEVLGI 451
YTM+SHGMSID RHMMLLAD+MT +GEVLGI
Sbjct: 1070 YTMKSHGMSIDTRHMMLLADVMTSRGEVLGI 1100