BLASTX nr result
ID: Zingiber24_contig00032894
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00032894
(731 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006369512.1| hypothetical protein POPTR_0001s24310g [Popu... 125 2e-26
gb|EOY34118.1| Glycine-rich RNA-binding protein 2 [Theobroma cacao] 121 3e-25
ref|XP_004295934.1| PREDICTED: glycine-rich RNA-binding protein ... 119 1e-24
ref|XP_003632106.1| PREDICTED: glycine-rich RNA-binding protein ... 116 7e-24
ref|XP_006424767.1| hypothetical protein CICLE_v10029787mg [Citr... 116 9e-24
gb|EEC72267.1| hypothetical protein OsI_05421 [Oryza sativa Indi... 116 9e-24
ref|NP_001045556.2| Os01g0974600 [Oryza sativa Japonica Group] g... 116 9e-24
dbj|BAD87838.1| hypothetical protein [Oryza sativa Japonica Group] 116 9e-24
ref|XP_003565182.1| PREDICTED: glycine-rich RNA-binding protein ... 113 6e-23
ref|XP_006350171.1| PREDICTED: glycine-rich RNA-binding protein ... 113 7e-23
ref|XP_004962752.1| PREDICTED: glycine-rich RNA-binding protein ... 112 1e-22
ref|XP_004236595.1| PREDICTED: glycine-rich RNA-binding protein ... 112 2e-22
ref|XP_006488273.1| PREDICTED: glycine-rich RNA-binding protein ... 111 2e-22
ref|XP_002457031.1| hypothetical protein SORBIDRAFT_03g047450 [S... 111 2e-22
ref|XP_002862718.1| hypothetical protein ARALYDRAFT_359421 [Arab... 111 3e-22
ref|NP_001236472.1| uncharacterized protein LOC100306540 [Glycin... 111 3e-22
ref|XP_006646744.1| PREDICTED: glycine-rich RNA-binding protein ... 110 4e-22
ref|XP_004986723.1| PREDICTED: glycine-rich RNA-binding protein ... 110 6e-22
gb|EMJ09112.1| hypothetical protein PRUPE_ppa019460mg [Prunus pe... 109 1e-21
ref|XP_003606655.1| Glycine-rich RNA-binding protein [Medicago t... 109 1e-21
>ref|XP_006369512.1| hypothetical protein POPTR_0001s24310g [Populus trichocarpa]
gi|550348075|gb|ERP66081.1| hypothetical protein
POPTR_0001s24310g [Populus trichocarpa]
Length = 103
Score = 125 bits (313), Expect = 2e-26
Identities = 63/97 (64%), Positives = 79/97 (81%), Gaps = 1/97 (1%)
Frame = -2
Query: 511 SQAFSFP-ARRLLVRFTSSKLFIGGLSFDTNETALRDAFAEHGEIIEVKVICDRMTSKSK 335
+++ S P ARRLL R S+KLF+GGLS+DTNET L+DAF ++GEIIEVKVIC R+ +SK
Sbjct: 5 NRSVSLPLARRLLARHLSTKLFVGGLSYDTNETVLKDAFGKYGEIIEVKVICHRVYGESK 64
Query: 334 GYGFVQFSSQEAATIALQKMHGESLDGRNIRVEYAEK 224
GYGFVQFSS+ AA+ AL++M G+ LD RNIRV YA K
Sbjct: 65 GYGFVQFSSEAAASTALKEMDGQLLDDRNIRVHYAHK 101
>gb|EOY34118.1| Glycine-rich RNA-binding protein 2 [Theobroma cacao]
Length = 106
Score = 121 bits (303), Expect = 3e-25
Identities = 58/89 (65%), Positives = 73/89 (82%)
Frame = -2
Query: 490 ARRLLVRFTSSKLFIGGLSFDTNETALRDAFAEHGEIIEVKVICDRMTSKSKGYGFVQFS 311
A L VR + SKLF+GGLS+DTNET L+DAF +HGEIIEV+VIC ++ KS+GYGFV+F+
Sbjct: 17 AGSLSVRNSCSKLFVGGLSYDTNETVLKDAFEKHGEIIEVRVICHHVSGKSRGYGFVRFA 76
Query: 310 SQEAATIALQKMHGESLDGRNIRVEYAEK 224
S+ AA AL++MH + LDGRNIRVEYA K
Sbjct: 77 SEAAANAALKEMHSQVLDGRNIRVEYAHK 105
>ref|XP_004295934.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
[Fragaria vesca subsp. vesca]
Length = 108
Score = 119 bits (298), Expect = 1e-24
Identities = 56/93 (60%), Positives = 75/93 (80%)
Frame = -2
Query: 502 FSFPARRLLVRFTSSKLFIGGLSFDTNETALRDAFAEHGEIIEVKVICDRMTSKSKGYGF 323
+S AR+ R +S+KLF+GGLS+DTNE L+DAF +HGEIIEVKVICD ++ KSKGYGF
Sbjct: 15 WSILARKSWARLSSTKLFVGGLSYDTNEPVLKDAFGKHGEIIEVKVICDHVSGKSKGYGF 74
Query: 322 VQFSSQEAATIALQKMHGESLDGRNIRVEYAEK 224
V+F+S+ A+ AL++M G+ LDGR IR+E+A K
Sbjct: 75 VKFTSETEASTALKEMDGQVLDGRQIRLEFAHK 107
>ref|XP_003632106.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
[Vitis vinifera] gi|296084274|emb|CBI24662.3| unnamed
protein product [Vitis vinifera]
Length = 108
Score = 116 bits (291), Expect = 7e-24
Identities = 60/90 (66%), Positives = 73/90 (81%), Gaps = 2/90 (2%)
Frame = -2
Query: 487 RRLLVRFTSSKLFIG--GLSFDTNETALRDAFAEHGEIIEVKVICDRMTSKSKGYGFVQF 314
R L+ R + KLFIG GLS+DTNET L+DAF ++GEIIEVKVICD ++ KSKGYGFVQF
Sbjct: 18 RWLVSRGSCRKLFIGDAGLSYDTNETILKDAFGQYGEIIEVKVICDHVSGKSKGYGFVQF 77
Query: 313 SSQEAATIALQKMHGESLDGRNIRVEYAEK 224
+S + A IAL++M G+SLDGRNIRV YA K
Sbjct: 78 TSDDDAHIALKEMDGQSLDGRNIRVTYAHK 107
>ref|XP_006424767.1| hypothetical protein CICLE_v10029787mg [Citrus clementina]
gi|568870157|ref|XP_006488276.1| PREDICTED: glycine-rich
RNA-binding protein 2, mitochondrial-like isoform X5
[Citrus sinensis] gi|557526701|gb|ESR38007.1|
hypothetical protein CICLE_v10029787mg [Citrus
clementina]
Length = 106
Score = 116 bits (290), Expect = 9e-24
Identities = 55/79 (69%), Positives = 68/79 (86%)
Frame = -2
Query: 460 SKLFIGGLSFDTNETALRDAFAEHGEIIEVKVICDRMTSKSKGYGFVQFSSQEAATIALQ 281
+KLFIGGLS+DTNET L+DAF +HGEIIEVKVICDR+T +S+GYGFV+F+S+ AA A++
Sbjct: 27 TKLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAAGEAIK 86
Query: 280 KMHGESLDGRNIRVEYAEK 224
+M G LDGRNIRV YA K
Sbjct: 87 EMDGLLLDGRNIRVNYAHK 105
>gb|EEC72267.1| hypothetical protein OsI_05421 [Oryza sativa Indica Group]
Length = 116
Score = 116 bits (290), Expect = 9e-24
Identities = 55/77 (71%), Positives = 66/77 (85%)
Frame = -2
Query: 460 SKLFIGGLSFDTNETALRDAFAEHGEIIEVKVICDRMTSKSKGYGFVQFSSQEAATIALQ 281
SKLFIGGLS+DTNETAL+DAF++HG II+VKVIC +T KSKGYGFV+F+S++ A AL
Sbjct: 37 SKLFIGGLSYDTNETALKDAFSQHGHIIQVKVICHPVTGKSKGYGFVKFASEDEAAAALH 96
Query: 280 KMHGESLDGRNIRVEYA 230
KM GE +DGRNIRV YA
Sbjct: 97 KMGGEVIDGRNIRVHYA 113
>ref|NP_001045556.2| Os01g0974600 [Oryza sativa Japonica Group]
gi|215768629|dbj|BAH00858.1| unnamed protein product
[Oryza sativa Japonica Group]
gi|222619969|gb|EEE56101.1| hypothetical protein
OsJ_04953 [Oryza sativa Japonica Group]
gi|255674125|dbj|BAF07470.2| Os01g0974600 [Oryza sativa
Japonica Group]
Length = 116
Score = 116 bits (290), Expect = 9e-24
Identities = 55/77 (71%), Positives = 66/77 (85%)
Frame = -2
Query: 460 SKLFIGGLSFDTNETALRDAFAEHGEIIEVKVICDRMTSKSKGYGFVQFSSQEAATIALQ 281
SKLFIGGLS+DTNETAL+DAF++HG II+VKVIC +T KSKGYGFV+F+S++ A AL
Sbjct: 37 SKLFIGGLSYDTNETALKDAFSQHGHIIQVKVICHPVTGKSKGYGFVKFASEDEAAAALH 96
Query: 280 KMHGESLDGRNIRVEYA 230
KM GE +DGRNIRV YA
Sbjct: 97 KMGGEVIDGRNIRVHYA 113
>dbj|BAD87838.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 203
Score = 116 bits (290), Expect = 9e-24
Identities = 55/77 (71%), Positives = 66/77 (85%)
Frame = -2
Query: 460 SKLFIGGLSFDTNETALRDAFAEHGEIIEVKVICDRMTSKSKGYGFVQFSSQEAATIALQ 281
SKLFIGGLS+DTNETAL+DAF++HG II+VKVIC +T KSKGYGFV+F+S++ A AL
Sbjct: 124 SKLFIGGLSYDTNETALKDAFSQHGHIIQVKVICHPVTGKSKGYGFVKFASEDEAAAALH 183
Query: 280 KMHGESLDGRNIRVEYA 230
KM GE +DGRNIRV YA
Sbjct: 184 KMGGEVIDGRNIRVHYA 200
>ref|XP_003565182.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
[Brachypodium distachyon]
Length = 109
Score = 113 bits (283), Expect = 6e-23
Identities = 59/94 (62%), Positives = 72/94 (76%), Gaps = 4/94 (4%)
Frame = -2
Query: 499 SFPARRLLVR---FTS-SKLFIGGLSFDTNETALRDAFAEHGEIIEVKVICDRMTSKSKG 332
+ P R LL R F+S SKLF+GGLS+DTNE AL+DAF++HG + EVKVIC +T +SKG
Sbjct: 13 TIPLRNLLNRSANFSSCSKLFVGGLSYDTNEIALKDAFSQHGTVTEVKVICHPVTGRSKG 72
Query: 331 YGFVQFSSQEAATIALQKMHGESLDGRNIRVEYA 230
YGFV+FSS+ A AL+KM E LDGRNIRV YA
Sbjct: 73 YGFVKFSSESEAAAALEKMSNELLDGRNIRVHYA 106
>ref|XP_006350171.1| PREDICTED: glycine-rich RNA-binding protein 4, mitochondrial-like
isoform X1 [Solanum tuberosum]
gi|565367009|ref|XP_006350172.1| PREDICTED: glycine-rich
RNA-binding protein 4, mitochondrial-like isoform X2
[Solanum tuberosum] gi|565367011|ref|XP_006350173.1|
PREDICTED: glycine-rich RNA-binding protein 4,
mitochondrial-like isoform X3 [Solanum tuberosum]
Length = 105
Score = 113 bits (282), Expect = 7e-23
Identities = 55/89 (61%), Positives = 69/89 (77%)
Frame = -2
Query: 490 ARRLLVRFTSSKLFIGGLSFDTNETALRDAFAEHGEIIEVKVICDRMTSKSKGYGFVQFS 311
AR + R + SKLFIGGL +DTNE L+ AF +HGE IEVKVICD + KSKGYGFV+F+
Sbjct: 16 ARFVTSRHSCSKLFIGGLCYDTNEPILKQAFEQHGETIEVKVICDHKSGKSKGYGFVKFT 75
Query: 310 SQEAATIALQKMHGESLDGRNIRVEYAEK 224
S+ AA+ AL++M G+ LDGRNIR+ YA K
Sbjct: 76 SETAASKALKEMDGQLLDGRNIRISYAHK 104
>ref|XP_004962752.1| PREDICTED: glycine-rich RNA-binding protein 3, mitochondrial-like
isoform X1 [Setaria italica]
Length = 121
Score = 112 bits (281), Expect = 1e-22
Identities = 52/77 (67%), Positives = 66/77 (85%)
Frame = -2
Query: 457 KLFIGGLSFDTNETALRDAFAEHGEIIEVKVICDRMTSKSKGYGFVQFSSQEAATIALQK 278
KLFIGGLS+DTNETAL+DAF++HG++I VKVIC T KSKG+GFV FSS++ A A+QK
Sbjct: 34 KLFIGGLSYDTNETALKDAFSQHGDVIAVKVICHPTTGKSKGFGFVTFSSEDEAAAAVQK 93
Query: 277 MHGESLDGRNIRVEYAE 227
M+GE LDGR IRV+Y++
Sbjct: 94 MNGEVLDGRTIRVQYSD 110
>ref|XP_004236595.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
[Solanum lycopersicum]
Length = 105
Score = 112 bits (279), Expect = 2e-22
Identities = 54/89 (60%), Positives = 69/89 (77%)
Frame = -2
Query: 490 ARRLLVRFTSSKLFIGGLSFDTNETALRDAFAEHGEIIEVKVICDRMTSKSKGYGFVQFS 311
AR + R + SKLFIGGL +DTNE L+ AF +HGE IEVKVICD + KSKGYGFV+F+
Sbjct: 16 ARFVTSRHSCSKLFIGGLCYDTNEPVLKQAFEQHGETIEVKVICDHKSGKSKGYGFVKFT 75
Query: 310 SQEAATIALQKMHGESLDGRNIRVEYAEK 224
S+ AA+ AL++M G+ LDGRNIR+ +A K
Sbjct: 76 SETAASKALKEMDGQLLDGRNIRISFAHK 104
>ref|XP_006488273.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
isoform X2 [Citrus sinensis]
gi|568870153|ref|XP_006488274.1| PREDICTED: glycine-rich
RNA-binding protein 2, mitochondrial-like isoform X3
[Citrus sinensis] gi|568870155|ref|XP_006488275.1|
PREDICTED: glycine-rich RNA-binding protein 2,
mitochondrial-like isoform X4 [Citrus sinensis]
Length = 107
Score = 111 bits (278), Expect = 2e-22
Identities = 55/80 (68%), Positives = 68/80 (85%), Gaps = 1/80 (1%)
Frame = -2
Query: 460 SKLFIGGLSFDTNETALRDAFAEHGEIIE-VKVICDRMTSKSKGYGFVQFSSQEAATIAL 284
+KLFIGGLS+DTNET L+DAF +HGEIIE VKVICDR+T +S+GYGFV+F+S+ AA A+
Sbjct: 27 TKLFIGGLSYDTNETVLKDAFGQHGEIIEAVKVICDRVTGQSRGYGFVKFASEAAAGEAI 86
Query: 283 QKMHGESLDGRNIRVEYAEK 224
++M G LDGRNIRV YA K
Sbjct: 87 KEMDGLLLDGRNIRVNYAHK 106
>ref|XP_002457031.1| hypothetical protein SORBIDRAFT_03g047450 [Sorghum bicolor]
gi|241929006|gb|EES02151.1| hypothetical protein
SORBIDRAFT_03g047450 [Sorghum bicolor]
Length = 146
Score = 111 bits (278), Expect = 2e-22
Identities = 52/79 (65%), Positives = 67/79 (84%)
Frame = -2
Query: 466 TSSKLFIGGLSFDTNETALRDAFAEHGEIIEVKVICDRMTSKSKGYGFVQFSSQEAATIA 287
+SS LFIGGLS+DTNETAL+DAF+++G++I V+VIC T KSKG+GFV+FSS+ A A
Sbjct: 57 SSSNLFIGGLSYDTNETALKDAFSQYGDVIAVRVICHPTTGKSKGFGFVKFSSENQAAAA 116
Query: 286 LQKMHGESLDGRNIRVEYA 230
LQK++G+ LDGRNIRV YA
Sbjct: 117 LQKLNGQVLDGRNIRVHYA 135
>ref|XP_002862718.1| hypothetical protein ARALYDRAFT_359421 [Arabidopsis lyrata subsp.
lyrata] gi|297308404|gb|EFH38976.1| hypothetical protein
ARALYDRAFT_359421 [Arabidopsis lyrata subsp. lyrata]
Length = 113
Score = 111 bits (277), Expect = 3e-22
Identities = 53/87 (60%), Positives = 68/87 (78%)
Frame = -2
Query: 487 RRLLVRFTSSKLFIGGLSFDTNETALRDAFAEHGEIIEVKVICDRMTSKSKGYGFVQFSS 308
R L +R + SKLF+GGLS+DTNE L++ F ++GE+IEVKVICD + KSKGYGFV F S
Sbjct: 17 RYLTIRGSCSKLFVGGLSYDTNEPVLKNEFEKYGEVIEVKVICDHKSGKSKGYGFVLFDS 76
Query: 307 QEAATIALQKMHGESLDGRNIRVEYAE 227
+EAA AL M+ + L+GRNIRVEYA+
Sbjct: 77 EEAAASALASMNNQLLEGRNIRVEYAQ 103
>ref|NP_001236472.1| uncharacterized protein LOC100306540 [Glycine max]
gi|571491190|ref|XP_006591823.1| PREDICTED:
uncharacterized protein LOC100306540 isoform X1 [Glycine
max] gi|571491192|ref|XP_006591824.1| PREDICTED:
uncharacterized protein LOC100306540 isoform X2 [Glycine
max] gi|255628821|gb|ACU14755.1| unknown [Glycine max]
Length = 146
Score = 111 bits (277), Expect = 3e-22
Identities = 54/93 (58%), Positives = 68/93 (73%)
Frame = -2
Query: 502 FSFPARRLLVRFTSSKLFIGGLSFDTNETALRDAFAEHGEIIEVKVICDRMTSKSKGYGF 323
F P + +S+KLF+ GLS+DTNE LRDAF +HGEIIEVKVICD +T KS+GYGF
Sbjct: 44 FHLPRFLCVRHHSSTKLFVTGLSYDTNEPILRDAFGQHGEIIEVKVICDHVTGKSRGYGF 103
Query: 322 VQFSSQEAATIALQKMHGESLDGRNIRVEYAEK 224
V+F S+ A A ++M+G+ LDGR IRV YA K
Sbjct: 104 VRFVSETTAAAARKEMNGQILDGRRIRVSYAHK 136
>ref|XP_006646744.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
[Oryza brachyantha]
Length = 113
Score = 110 bits (276), Expect = 4e-22
Identities = 52/77 (67%), Positives = 63/77 (81%)
Frame = -2
Query: 460 SKLFIGGLSFDTNETALRDAFAEHGEIIEVKVICDRMTSKSKGYGFVQFSSQEAATIALQ 281
SKLF+ GLS+DTNETAL+DAF+ HG II+VKVIC +T KSKGYGFV+F+S++ A AL
Sbjct: 34 SKLFVAGLSYDTNETALKDAFSHHGHIIQVKVICHPVTGKSKGYGFVKFASEDEAAAALH 93
Query: 280 KMHGESLDGRNIRVEYA 230
KM GE +DGR IRV YA
Sbjct: 94 KMSGEVIDGRTIRVHYA 110
>ref|XP_004986723.1| PREDICTED: glycine-rich RNA-binding protein 3, mitochondrial-like
[Setaria italica]
Length = 120
Score = 110 bits (274), Expect = 6e-22
Identities = 51/77 (66%), Positives = 65/77 (84%)
Frame = -2
Query: 457 KLFIGGLSFDTNETALRDAFAEHGEIIEVKVICDRMTSKSKGYGFVQFSSQEAATIALQK 278
KLFIGGL +DTNETAL+DAF++HG++I VKVIC T KSKG+GFV FSS++ AT A+QK
Sbjct: 33 KLFIGGLCYDTNETALKDAFSQHGDVIAVKVICHPTTGKSKGFGFVTFSSEDEATAAVQK 92
Query: 277 MHGESLDGRNIRVEYAE 227
M+GE L GR IRV+Y++
Sbjct: 93 MNGEVLHGRTIRVQYSD 109
>gb|EMJ09112.1| hypothetical protein PRUPE_ppa019460mg [Prunus persica]
Length = 106
Score = 109 bits (272), Expect = 1e-21
Identities = 51/88 (57%), Positives = 69/88 (78%)
Frame = -2
Query: 487 RRLLVRFTSSKLFIGGLSFDTNETALRDAFAEHGEIIEVKVICDRMTSKSKGYGFVQFSS 308
R R +S+ LF+GGLS+DTNE L++AF +HGEIIEVKVICD ++ KSKGYGFV+F+S
Sbjct: 18 RSFWARHSSTNLFVGGLSYDTNEPVLKEAFGKHGEIIEVKVICDHVSGKSKGYGFVKFTS 77
Query: 307 QEAATIALQKMHGESLDGRNIRVEYAEK 224
A+ AL++M G+ LDGR IR+E+A +
Sbjct: 78 GIEASTALKEMDGQLLDGRQIRLEFAHR 105
>ref|XP_003606655.1| Glycine-rich RNA-binding protein [Medicago truncatula]
gi|355507710|gb|AES88852.1| Glycine-rich RNA-binding
protein [Medicago truncatula]
Length = 112
Score = 109 bits (272), Expect = 1e-21
Identities = 55/93 (59%), Positives = 70/93 (75%), Gaps = 1/93 (1%)
Frame = -2
Query: 499 SFPARRLLVRFTSS-KLFIGGLSFDTNETALRDAFAEHGEIIEVKVICDRMTSKSKGYGF 323
+ P L VR SS KLFI GLS++TNET LRD F +HG+IIEVKVIC+ T +SKGYGF
Sbjct: 19 TLPQLLLCVRHHSSTKLFIAGLSYNTNETVLRDTFEQHGQIIEVKVICNHRTGESKGYGF 78
Query: 322 VQFSSQEAATIALQKMHGESLDGRNIRVEYAEK 224
V+F+S+ AA A +++HG+ +DGR IRV YA K
Sbjct: 79 VRFNSETAAATARKELHGQIVDGRRIRVGYAHK 111