BLASTX nr result
ID: Zingiber24_contig00032860
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00032860
(209 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EOX95336.1| RNA helicase family protein isoform 5 [Theobroma ... 137 1e-30
gb|EOX95334.1| Pre-mRNA-splicing factor ATP-dependent RNA helica... 137 1e-30
gb|EOX95332.1| RNA helicase family protein isoform 1 [Theobroma ... 137 1e-30
emb|CBI36976.3| unnamed protein product [Vitis vinifera] 137 1e-30
ref|XP_002278247.1| PREDICTED: probable pre-mRNA-splicing factor... 137 1e-30
ref|XP_003518717.1| PREDICTED: probable pre-mRNA-splicing factor... 136 3e-30
ref|XP_003591371.1| ATP-dependent RNA helicase-like protein [Med... 136 3e-30
gb|EXB55979.1| putative pre-mRNA-splicing factor ATP-dependent R... 136 3e-30
ref|XP_004495890.1| PREDICTED: probable pre-mRNA-splicing factor... 136 3e-30
ref|XP_002515245.1| ATP-dependent RNA helicase, putative [Ricinu... 136 3e-30
ref|NP_182247.1| putative pre-mRNA-splicing factor ATP-dependent... 135 4e-30
ref|NP_191790.1| RNA helicase family protein [Arabidopsis thalia... 135 6e-30
ref|XP_006290650.1| hypothetical protein CARUB_v10016742mg [Caps... 135 6e-30
ref|XP_003554559.1| PREDICTED: probable pre-mRNA-splicing factor... 135 6e-30
ref|XP_003521600.1| PREDICTED: probable pre-mRNA-splicing factor... 135 6e-30
ref|XP_002878448.1| hypothetical protein ARALYDRAFT_349295 [Arab... 135 6e-30
ref|XP_006845501.1| hypothetical protein AMTR_s00019p00154740 [A... 135 7e-30
gb|ESW35196.1| hypothetical protein PHAVU_001G214700g [Phaseolus... 134 1e-29
gb|EMJ22755.1| hypothetical protein PRUPE_ppa002008mg [Prunus pe... 134 1e-29
gb|EPS66757.1| hypothetical protein M569_08016, partial [Genlise... 134 2e-29
>gb|EOX95336.1| RNA helicase family protein isoform 5 [Theobroma cacao]
Length = 683
Score = 137 bits (345), Expect = 1e-30
Identities = 65/69 (94%), Positives = 68/69 (98%)
Frame = -2
Query: 208 RTMKAADNVRQQLVRIMARFNLKLCSTDFNSRDYYVNIRKSMLAGYFMQVAHLERTGHYL 29
R +KAADNVRQQLVRIMARFNLKLCSTDFNSRDYY+NIRK+MLAGYFMQVAHLERTGHYL
Sbjct: 537 RALKAADNVRQQLVRIMARFNLKLCSTDFNSRDYYINIRKAMLAGYFMQVAHLERTGHYL 596
Query: 28 TVKDNQVVH 2
TVKDNQVVH
Sbjct: 597 TVKDNQVVH 605
>gb|EOX95334.1| Pre-mRNA-splicing factor ATP-dependent RNA helicase isoform 3
[Theobroma cacao]
Length = 746
Score = 137 bits (345), Expect = 1e-30
Identities = 65/69 (94%), Positives = 68/69 (98%)
Frame = -2
Query: 208 RTMKAADNVRQQLVRIMARFNLKLCSTDFNSRDYYVNIRKSMLAGYFMQVAHLERTGHYL 29
R +KAADNVRQQLVRIMARFNLKLCSTDFNSRDYY+NIRK+MLAGYFMQVAHLERTGHYL
Sbjct: 579 RALKAADNVRQQLVRIMARFNLKLCSTDFNSRDYYINIRKAMLAGYFMQVAHLERTGHYL 638
Query: 28 TVKDNQVVH 2
TVKDNQVVH
Sbjct: 639 TVKDNQVVH 647
>gb|EOX95332.1| RNA helicase family protein isoform 1 [Theobroma cacao]
Length = 725
Score = 137 bits (345), Expect = 1e-30
Identities = 65/69 (94%), Positives = 68/69 (98%)
Frame = -2
Query: 208 RTMKAADNVRQQLVRIMARFNLKLCSTDFNSRDYYVNIRKSMLAGYFMQVAHLERTGHYL 29
R +KAADNVRQQLVRIMARFNLKLCSTDFNSRDYY+NIRK+MLAGYFMQVAHLERTGHYL
Sbjct: 579 RALKAADNVRQQLVRIMARFNLKLCSTDFNSRDYYINIRKAMLAGYFMQVAHLERTGHYL 638
Query: 28 TVKDNQVVH 2
TVKDNQVVH
Sbjct: 639 TVKDNQVVH 647
>emb|CBI36976.3| unnamed protein product [Vitis vinifera]
Length = 687
Score = 137 bits (345), Expect = 1e-30
Identities = 65/69 (94%), Positives = 68/69 (98%)
Frame = -2
Query: 208 RTMKAADNVRQQLVRIMARFNLKLCSTDFNSRDYYVNIRKSMLAGYFMQVAHLERTGHYL 29
R +KAADNVRQQLVRIMARFNLKLCSTDFNSRDYY+NIRK+MLAGYFMQVAHLERTGHYL
Sbjct: 541 RALKAADNVRQQLVRIMARFNLKLCSTDFNSRDYYINIRKAMLAGYFMQVAHLERTGHYL 600
Query: 28 TVKDNQVVH 2
TVKDNQVVH
Sbjct: 601 TVKDNQVVH 609
>ref|XP_002278247.1| PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA
helicase [Vitis vinifera] gi|147787427|emb|CAN64445.1|
hypothetical protein VITISV_036050 [Vitis vinifera]
Length = 728
Score = 137 bits (345), Expect = 1e-30
Identities = 65/69 (94%), Positives = 68/69 (98%)
Frame = -2
Query: 208 RTMKAADNVRQQLVRIMARFNLKLCSTDFNSRDYYVNIRKSMLAGYFMQVAHLERTGHYL 29
R +KAADNVRQQLVRIMARFNLKLCSTDFNSRDYY+NIRK+MLAGYFMQVAHLERTGHYL
Sbjct: 582 RALKAADNVRQQLVRIMARFNLKLCSTDFNSRDYYINIRKAMLAGYFMQVAHLERTGHYL 641
Query: 28 TVKDNQVVH 2
TVKDNQVVH
Sbjct: 642 TVKDNQVVH 650
>ref|XP_003518717.1| PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA
helicase-like [Glycine max]
Length = 722
Score = 136 bits (343), Expect = 3e-30
Identities = 65/69 (94%), Positives = 68/69 (98%)
Frame = -2
Query: 208 RTMKAADNVRQQLVRIMARFNLKLCSTDFNSRDYYVNIRKSMLAGYFMQVAHLERTGHYL 29
R +K+ADNVRQQLVRIMARFNLKLCSTDFNSRDYYVNIRK+MLAGYFMQVAHLERTGHYL
Sbjct: 576 RALKSADNVRQQLVRIMARFNLKLCSTDFNSRDYYVNIRKAMLAGYFMQVAHLERTGHYL 635
Query: 28 TVKDNQVVH 2
TVKDNQVVH
Sbjct: 636 TVKDNQVVH 644
>ref|XP_003591371.1| ATP-dependent RNA helicase-like protein [Medicago truncatula]
gi|355480419|gb|AES61622.1| ATP-dependent RNA
helicase-like protein [Medicago truncatula]
Length = 721
Score = 136 bits (343), Expect = 3e-30
Identities = 65/69 (94%), Positives = 68/69 (98%)
Frame = -2
Query: 208 RTMKAADNVRQQLVRIMARFNLKLCSTDFNSRDYYVNIRKSMLAGYFMQVAHLERTGHYL 29
R +K+ADNVRQQLVRIMARFNLKLCSTDFNSRDYYVNIRK+MLAGYFMQVAHLERTGHYL
Sbjct: 575 RALKSADNVRQQLVRIMARFNLKLCSTDFNSRDYYVNIRKAMLAGYFMQVAHLERTGHYL 634
Query: 28 TVKDNQVVH 2
TVKDNQVVH
Sbjct: 635 TVKDNQVVH 643
>gb|EXB55979.1| putative pre-mRNA-splicing factor ATP-dependent RNA helicase [Morus
notabilis]
Length = 922
Score = 136 bits (342), Expect = 3e-30
Identities = 64/69 (92%), Positives = 68/69 (98%)
Frame = -2
Query: 208 RTMKAADNVRQQLVRIMARFNLKLCSTDFNSRDYYVNIRKSMLAGYFMQVAHLERTGHYL 29
R +K+ADNVRQQLVRIMARFNLKLCSTDFNSRDYY+NIRK+MLAGYFMQVAHLERTGHYL
Sbjct: 776 RALKSADNVRQQLVRIMARFNLKLCSTDFNSRDYYINIRKAMLAGYFMQVAHLERTGHYL 835
Query: 28 TVKDNQVVH 2
TVKDNQVVH
Sbjct: 836 TVKDNQVVH 844
>ref|XP_004495890.1| PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA
helicase-like [Cicer arietinum]
Length = 721
Score = 136 bits (342), Expect = 3e-30
Identities = 64/69 (92%), Positives = 68/69 (98%)
Frame = -2
Query: 208 RTMKAADNVRQQLVRIMARFNLKLCSTDFNSRDYYVNIRKSMLAGYFMQVAHLERTGHYL 29
R +K+ADNVRQQLVRIMARFNLKLCSTDFNSRDYY+NIRK+MLAGYFMQVAHLERTGHYL
Sbjct: 575 RALKSADNVRQQLVRIMARFNLKLCSTDFNSRDYYINIRKAMLAGYFMQVAHLERTGHYL 634
Query: 28 TVKDNQVVH 2
TVKDNQVVH
Sbjct: 635 TVKDNQVVH 643
>ref|XP_002515245.1| ATP-dependent RNA helicase, putative [Ricinus communis]
gi|223545725|gb|EEF47229.1| ATP-dependent RNA helicase,
putative [Ricinus communis]
Length = 731
Score = 136 bits (342), Expect = 3e-30
Identities = 65/69 (94%), Positives = 67/69 (97%)
Frame = -2
Query: 208 RTMKAADNVRQQLVRIMARFNLKLCSTDFNSRDYYVNIRKSMLAGYFMQVAHLERTGHYL 29
R +KAADNVRQQLVRIM RFNLKLCSTDFNSRDYYVNIRK+MLAGYFMQVAHLERTGHYL
Sbjct: 585 RALKAADNVRQQLVRIMTRFNLKLCSTDFNSRDYYVNIRKAMLAGYFMQVAHLERTGHYL 644
Query: 28 TVKDNQVVH 2
TVKDNQVVH
Sbjct: 645 TVKDNQVVH 653
>ref|NP_182247.1| putative pre-mRNA-splicing factor ATP-dependent RNA helicase
[Arabidopsis thaliana]
gi|3913425|sp|O22899.1|DHX15_ARATH RecName:
Full=Probable pre-mRNA-splicing factor ATP-dependent RNA
helicase gi|2275203|gb|AAB63825.1| putative pre-mRNA
splicing factor RNA helicase [Arabidopsis thaliana]
gi|22135845|gb|AAM91108.1| At2g47250/T8I13.9
[Arabidopsis thaliana] gi|28416499|gb|AAO42780.1|
At2g47250/T8I13.9 [Arabidopsis thaliana]
gi|330255726|gb|AEC10820.1| putative pre-mRNA-splicing
factor ATP-dependent RNA helicase [Arabidopsis thaliana]
Length = 729
Score = 135 bits (341), Expect = 4e-30
Identities = 64/69 (92%), Positives = 68/69 (98%)
Frame = -2
Query: 208 RTMKAADNVRQQLVRIMARFNLKLCSTDFNSRDYYVNIRKSMLAGYFMQVAHLERTGHYL 29
R MK+ADNVRQQLVRIM+RFNLK+CSTDFNSRDYYVNIRK+MLAGYFMQVAHLERTGHYL
Sbjct: 583 RAMKSADNVRQQLVRIMSRFNLKMCSTDFNSRDYYVNIRKAMLAGYFMQVAHLERTGHYL 642
Query: 28 TVKDNQVVH 2
TVKDNQVVH
Sbjct: 643 TVKDNQVVH 651
>ref|NP_191790.1| RNA helicase family protein [Arabidopsis thaliana]
gi|7340702|emb|CAB82945.1| ATP-dependent RNA
helicase-like protein [Arabidopsis thaliana]
gi|21539575|gb|AAM53340.1| ATP-dependent RNA
helicase-like protein [Arabidopsis thaliana]
gi|34098783|gb|AAQ56774.1| At3g62310 [Arabidopsis
thaliana] gi|332646816|gb|AEE80337.1| RNA helicase
family protein [Arabidopsis thaliana]
Length = 726
Score = 135 bits (340), Expect = 6e-30
Identities = 63/69 (91%), Positives = 68/69 (98%)
Frame = -2
Query: 208 RTMKAADNVRQQLVRIMARFNLKLCSTDFNSRDYYVNIRKSMLAGYFMQVAHLERTGHYL 29
R MK+ADNVRQQLVRIM+RFNLK+CSTDFNSRDYY+NIRK+MLAGYFMQVAHLERTGHYL
Sbjct: 579 RAMKSADNVRQQLVRIMSRFNLKMCSTDFNSRDYYINIRKAMLAGYFMQVAHLERTGHYL 638
Query: 28 TVKDNQVVH 2
TVKDNQVVH
Sbjct: 639 TVKDNQVVH 647
>ref|XP_006290650.1| hypothetical protein CARUB_v10016742mg [Capsella rubella]
gi|482559357|gb|EOA23548.1| hypothetical protein
CARUB_v10016742mg [Capsella rubella]
Length = 725
Score = 135 bits (340), Expect = 6e-30
Identities = 63/69 (91%), Positives = 68/69 (98%)
Frame = -2
Query: 208 RTMKAADNVRQQLVRIMARFNLKLCSTDFNSRDYYVNIRKSMLAGYFMQVAHLERTGHYL 29
R MK+ADNVRQQLVRIM+RFNLK+CSTDFNSRDYY+NIRK+MLAGYFMQVAHLERTGHYL
Sbjct: 579 RAMKSADNVRQQLVRIMSRFNLKMCSTDFNSRDYYINIRKAMLAGYFMQVAHLERTGHYL 638
Query: 28 TVKDNQVVH 2
TVKDNQVVH
Sbjct: 639 TVKDNQVVH 647
>ref|XP_003554559.1| PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA
helicase-like isoform 1 [Glycine max]
Length = 721
Score = 135 bits (340), Expect = 6e-30
Identities = 64/69 (92%), Positives = 68/69 (98%)
Frame = -2
Query: 208 RTMKAADNVRQQLVRIMARFNLKLCSTDFNSRDYYVNIRKSMLAGYFMQVAHLERTGHYL 29
R +K+ADNVRQQLVRIM+RFNLKLCSTDFNSRDYYVNIRK+MLAGYFMQVAHLERTGHYL
Sbjct: 575 RALKSADNVRQQLVRIMSRFNLKLCSTDFNSRDYYVNIRKAMLAGYFMQVAHLERTGHYL 634
Query: 28 TVKDNQVVH 2
TVKDNQVVH
Sbjct: 635 TVKDNQVVH 643
>ref|XP_003521600.1| PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA
helicase-like [Glycine max]
Length = 720
Score = 135 bits (340), Expect = 6e-30
Identities = 64/69 (92%), Positives = 68/69 (98%)
Frame = -2
Query: 208 RTMKAADNVRQQLVRIMARFNLKLCSTDFNSRDYYVNIRKSMLAGYFMQVAHLERTGHYL 29
R +K+ADNVRQQLVRIM+RFNLKLCSTDFNSRDYYVNIRK+MLAGYFMQVAHLERTGHYL
Sbjct: 574 RALKSADNVRQQLVRIMSRFNLKLCSTDFNSRDYYVNIRKAMLAGYFMQVAHLERTGHYL 633
Query: 28 TVKDNQVVH 2
TVKDNQVVH
Sbjct: 634 TVKDNQVVH 642
>ref|XP_002878448.1| hypothetical protein ARALYDRAFT_349295 [Arabidopsis lyrata subsp.
lyrata] gi|297324286|gb|EFH54707.1| hypothetical protein
ARALYDRAFT_349295 [Arabidopsis lyrata subsp. lyrata]
Length = 686
Score = 135 bits (340), Expect = 6e-30
Identities = 63/69 (91%), Positives = 68/69 (98%)
Frame = -2
Query: 208 RTMKAADNVRQQLVRIMARFNLKLCSTDFNSRDYYVNIRKSMLAGYFMQVAHLERTGHYL 29
R MK+ADNVRQQLVRIM+RFNLK+CSTDFNSRDYY+NIRK+MLAGYFMQVAHLERTGHYL
Sbjct: 539 RAMKSADNVRQQLVRIMSRFNLKMCSTDFNSRDYYINIRKAMLAGYFMQVAHLERTGHYL 598
Query: 28 TVKDNQVVH 2
TVKDNQVVH
Sbjct: 599 TVKDNQVVH 607
>ref|XP_006845501.1| hypothetical protein AMTR_s00019p00154740 [Amborella trichopoda]
gi|548848073|gb|ERN07176.1| hypothetical protein
AMTR_s00019p00154740 [Amborella trichopoda]
Length = 714
Score = 135 bits (339), Expect = 7e-30
Identities = 65/69 (94%), Positives = 66/69 (95%)
Frame = -2
Query: 208 RTMKAADNVRQQLVRIMARFNLKLCSTDFNSRDYYVNIRKSMLAGYFMQVAHLERTGHYL 29
R MKAADNVRQQLVRIMARFNLKLCSTDFNSRDYY NIRK+ML GYFMQVAHLERTGHYL
Sbjct: 568 RAMKAADNVRQQLVRIMARFNLKLCSTDFNSRDYYPNIRKAMLTGYFMQVAHLERTGHYL 627
Query: 28 TVKDNQVVH 2
TVKDNQVVH
Sbjct: 628 TVKDNQVVH 636
>gb|ESW35196.1| hypothetical protein PHAVU_001G214700g [Phaseolus vulgaris]
Length = 724
Score = 134 bits (337), Expect = 1e-29
Identities = 64/69 (92%), Positives = 67/69 (97%)
Frame = -2
Query: 208 RTMKAADNVRQQLVRIMARFNLKLCSTDFNSRDYYVNIRKSMLAGYFMQVAHLERTGHYL 29
R +K+ADNVRQQLVRIMARFNLK CSTDFNSRDYYVNIRK+MLAGYFMQVAHLERTGHYL
Sbjct: 578 RALKSADNVRQQLVRIMARFNLKQCSTDFNSRDYYVNIRKAMLAGYFMQVAHLERTGHYL 637
Query: 28 TVKDNQVVH 2
TVKDNQVVH
Sbjct: 638 TVKDNQVVH 646
>gb|EMJ22755.1| hypothetical protein PRUPE_ppa002008mg [Prunus persica]
Length = 730
Score = 134 bits (337), Expect = 1e-29
Identities = 63/69 (91%), Positives = 68/69 (98%)
Frame = -2
Query: 208 RTMKAADNVRQQLVRIMARFNLKLCSTDFNSRDYYVNIRKSMLAGYFMQVAHLERTGHYL 29
R +K+ADNVRQQLVRIMARF+LKLCSTDFNSRDYY+NIRK+MLAGYFMQVAHLERTGHYL
Sbjct: 585 RALKSADNVRQQLVRIMARFSLKLCSTDFNSRDYYINIRKAMLAGYFMQVAHLERTGHYL 644
Query: 28 TVKDNQVVH 2
TVKDNQVVH
Sbjct: 645 TVKDNQVVH 653
>gb|EPS66757.1| hypothetical protein M569_08016, partial [Genlisea aurea]
Length = 720
Score = 134 bits (336), Expect = 2e-29
Identities = 63/69 (91%), Positives = 67/69 (97%)
Frame = -2
Query: 208 RTMKAADNVRQQLVRIMARFNLKLCSTDFNSRDYYVNIRKSMLAGYFMQVAHLERTGHYL 29
R +K+ADNVRQQL RIMARFNLKLCSTDFNSRDYY+NIRK+MLAGYFMQVAHLERTGHYL
Sbjct: 579 RALKSADNVRQQLARIMARFNLKLCSTDFNSRDYYLNIRKAMLAGYFMQVAHLERTGHYL 638
Query: 28 TVKDNQVVH 2
TVKDNQVVH
Sbjct: 639 TVKDNQVVH 647