BLASTX nr result
ID: Zingiber24_contig00032784
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00032784
(316 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI17313.3| unnamed protein product [Vitis vinifera] 84 2e-14
ref|XP_002266394.1| PREDICTED: high mobility group B protein 15-... 84 2e-14
emb|CAN83439.1| hypothetical protein VITISV_021289 [Vitis vinifera] 84 2e-14
ref|XP_003621009.1| High mobility group family [Medicago truncat... 81 1e-13
ref|XP_006373058.1| hypothetical protein POPTR_0017s08230g [Popu... 79 5e-13
gb|EOY05287.1| HMG box protein with ARID/BRIGHT DNA-binding doma... 79 5e-13
gb|EOY05286.1| HMG box protein with ARID/BRIGHT DNA-binding doma... 79 5e-13
ref|XP_006857566.1| hypothetical protein AMTR_s00061p00067260 [A... 79 6e-13
gb|EMJ25802.1| hypothetical protein PRUPE_ppa026976mg [Prunus pe... 79 8e-13
ref|XP_004499691.1| PREDICTED: high mobility group B protein 10-... 78 1e-12
ref|XP_004298068.1| PREDICTED: high mobility group B protein 15-... 78 1e-12
ref|XP_002518095.1| transcription factor, putative [Ricinus comm... 78 1e-12
ref|XP_006493048.1| PREDICTED: high mobility group B protein 15-... 76 4e-12
ref|XP_004497360.1| PREDICTED: high mobility group B protein 15-... 75 9e-12
gb|AFK33347.1| unknown [Medicago truncatula] 75 1e-11
ref|XP_002307758.1| hypothetical protein POPTR_0005s26800g [Popu... 75 1e-11
gb|AFK40606.1| unknown [Medicago truncatula] 74 2e-11
ref|XP_003598285.1| AT-rich interactive domain-containing protei... 74 2e-11
gb|ABK24816.1| unknown [Picea sitchensis] 74 2e-11
ref|XP_003592799.1| High mobility group protein B3 [Medicago tru... 74 3e-11
>emb|CBI17313.3| unnamed protein product [Vitis vinifera]
Length = 483
Score = 84.0 bits (206), Expect = 2e-14
Identities = 39/61 (63%), Positives = 46/61 (75%)
Frame = +1
Query: 133 ETVMVDHHYPEPLAKYEDVIADPKLFTETLEDFHSRVGTKLRVPTVGGKELDLHCLFVEV 312
ETV H YP PLAKYED+++ PKLF TLE H+ +GTK +P +GGKELDLH LFVEV
Sbjct: 38 ETVSNYHPYPPPLAKYEDIVSSPKLFMGTLEKLHAVMGTKFMIPIIGGKELDLHRLFVEV 97
Query: 313 T 315
T
Sbjct: 98 T 98
>ref|XP_002266394.1| PREDICTED: high mobility group B protein 15-like [Vitis vinifera]
Length = 482
Score = 84.0 bits (206), Expect = 2e-14
Identities = 39/61 (63%), Positives = 46/61 (75%)
Frame = +1
Query: 133 ETVMVDHHYPEPLAKYEDVIADPKLFTETLEDFHSRVGTKLRVPTVGGKELDLHCLFVEV 312
ETV H YP PLAKYED+++ PKLF TLE H+ +GTK +P +GGKELDLH LFVEV
Sbjct: 37 ETVSNYHPYPPPLAKYEDIVSSPKLFMGTLEKLHAVMGTKFMIPIIGGKELDLHRLFVEV 96
Query: 313 T 315
T
Sbjct: 97 T 97
>emb|CAN83439.1| hypothetical protein VITISV_021289 [Vitis vinifera]
Length = 461
Score = 84.0 bits (206), Expect = 2e-14
Identities = 39/61 (63%), Positives = 46/61 (75%)
Frame = +1
Query: 133 ETVMVDHHYPEPLAKYEDVIADPKLFTETLEDFHSRVGTKLRVPTVGGKELDLHCLFVEV 312
ETV H YP PLAKYED+++ PKLF TLE H+ +GTK +P +GGKELDLH LFVEV
Sbjct: 16 ETVSNYHPYPPPLAKYEDIVSSPKLFMGTLEKLHAVMGTKFMIPIIGGKELDLHRLFVEV 75
Query: 313 T 315
T
Sbjct: 76 T 76
>ref|XP_003621009.1| High mobility group family [Medicago truncatula]
gi|355496024|gb|AES77227.1| High mobility group family
[Medicago truncatula]
Length = 437
Score = 81.3 bits (199), Expect = 1e-13
Identities = 37/57 (64%), Positives = 45/57 (78%)
Frame = +1
Query: 145 VDHHYPEPLAKYEDVIADPKLFTETLEDFHSRVGTKLRVPTVGGKELDLHCLFVEVT 315
+ H YPEPLAKY+DV+A+PKLF TLE H+ +GTK VP +GGKELDL LF+EVT
Sbjct: 21 MSHSYPEPLAKYDDVVANPKLFMLTLEKLHASMGTKFMVPIIGGKELDLCRLFIEVT 77
>ref|XP_006373058.1| hypothetical protein POPTR_0017s08230g [Populus trichocarpa]
gi|550319757|gb|ERP50855.1| hypothetical protein
POPTR_0017s08230g [Populus trichocarpa]
Length = 467
Score = 79.3 bits (194), Expect = 5e-13
Identities = 39/61 (63%), Positives = 44/61 (72%)
Frame = +1
Query: 133 ETVMVDHHYPEPLAKYEDVIADPKLFTETLEDFHSRVGTKLRVPTVGGKELDLHCLFVEV 312
E VM YP P A YEDVI PKLF ETLE FH+ +GTK +P +GGKEL+LH LFVEV
Sbjct: 20 EPVMNYVQYPAPGATYEDVIVSPKLFMETLEKFHAAMGTKFMIPIIGGKELNLHRLFVEV 79
Query: 313 T 315
T
Sbjct: 80 T 80
>gb|EOY05287.1| HMG box protein with ARID/BRIGHT DNA-binding domain isoform 2
[Theobroma cacao]
Length = 468
Score = 79.3 bits (194), Expect = 5e-13
Identities = 36/53 (67%), Positives = 42/53 (79%)
Frame = +1
Query: 157 YPEPLAKYEDVIADPKLFTETLEDFHSRVGTKLRVPTVGGKELDLHCLFVEVT 315
YP PLA+YEDV A+PKLF TLE H+ +GTK +P +GGKELDLH LFVEVT
Sbjct: 24 YPPPLARYEDVAANPKLFMATLEKLHATMGTKFMIPIIGGKELDLHRLFVEVT 76
>gb|EOY05286.1| HMG box protein with ARID/BRIGHT DNA-binding domain isoform 1
[Theobroma cacao]
Length = 469
Score = 79.3 bits (194), Expect = 5e-13
Identities = 36/53 (67%), Positives = 42/53 (79%)
Frame = +1
Query: 157 YPEPLAKYEDVIADPKLFTETLEDFHSRVGTKLRVPTVGGKELDLHCLFVEVT 315
YP PLA+YEDV A+PKLF TLE H+ +GTK +P +GGKELDLH LFVEVT
Sbjct: 24 YPPPLARYEDVAANPKLFMATLEKLHATMGTKFMIPIIGGKELDLHRLFVEVT 76
>ref|XP_006857566.1| hypothetical protein AMTR_s00061p00067260 [Amborella trichopoda]
gi|548861662|gb|ERN19033.1| hypothetical protein
AMTR_s00061p00067260 [Amborella trichopoda]
Length = 339
Score = 79.0 bits (193), Expect = 6e-13
Identities = 37/54 (68%), Positives = 41/54 (75%)
Frame = +1
Query: 154 HYPEPLAKYEDVIADPKLFTETLEDFHSRVGTKLRVPTVGGKELDLHCLFVEVT 315
HYP PLAKYE V A+P LF ETLE H +GTK VPT+GGK LDLH LF+EVT
Sbjct: 38 HYPLPLAKYEQVAANPLLFMETLEKLHKSLGTKFMVPTIGGKALDLHRLFLEVT 91
>gb|EMJ25802.1| hypothetical protein PRUPE_ppa026976mg [Prunus persica]
Length = 354
Score = 78.6 bits (192), Expect = 8e-13
Identities = 35/53 (66%), Positives = 43/53 (81%)
Frame = +1
Query: 157 YPEPLAKYEDVIADPKLFTETLEDFHSRVGTKLRVPTVGGKELDLHCLFVEVT 315
YP PLAK+E+V+A+PKLF TLE H+ +GTK +P +GGKELDLH LFVEVT
Sbjct: 24 YPAPLAKHEEVVANPKLFMATLEKLHASMGTKFMIPIIGGKELDLHRLFVEVT 76
>ref|XP_004499691.1| PREDICTED: high mobility group B protein 10-like isoform X1 [Cicer
arietinum]
Length = 313
Score = 78.2 bits (191), Expect = 1e-12
Identities = 38/80 (47%), Positives = 51/80 (63%), Gaps = 1/80 (1%)
Frame = +1
Query: 79 MEENERGGEVAEKGKYDLETVMVDHH-YPEPLAKYEDVIADPKLFTETLEDFHSRVGTKL 255
M NE E + + E+ + + + YP P A+Y D+I DP LF + L+ FH GTKL
Sbjct: 1 MRNNENENENQNENENQCESEVTNKNPYPPPTAEYNDLIHDPNLFHQKLQSFHDSFGTKL 60
Query: 256 RVPTVGGKELDLHCLFVEVT 315
++PT+GGK LDLH LFVEVT
Sbjct: 61 KIPTIGGKPLDLHHLFVEVT 80
>ref|XP_004298068.1| PREDICTED: high mobility group B protein 15-like [Fragaria vesca
subsp. vesca]
Length = 396
Score = 78.2 bits (191), Expect = 1e-12
Identities = 35/53 (66%), Positives = 42/53 (79%)
Frame = +1
Query: 157 YPEPLAKYEDVIADPKLFTETLEDFHSRVGTKLRVPTVGGKELDLHCLFVEVT 315
YP PLAKYE+V A+PKLF TLE H+ +GTK +P +GG+ELDLH LFVEVT
Sbjct: 25 YPAPLAKYEEVAANPKLFISTLEKLHASMGTKFMIPIIGGRELDLHRLFVEVT 77
>ref|XP_002518095.1| transcription factor, putative [Ricinus communis]
gi|223542691|gb|EEF44228.1| transcription factor,
putative [Ricinus communis]
Length = 466
Score = 77.8 bits (190), Expect = 1e-12
Identities = 36/61 (59%), Positives = 44/61 (72%)
Frame = +1
Query: 133 ETVMVDHHYPEPLAKYEDVIADPKLFTETLEDFHSRVGTKLRVPTVGGKELDLHCLFVEV 312
+ VM YP P A+YEDV +DPKLF TLE H+ +GTK +P +GG+ELDLH LFVEV
Sbjct: 16 QLVMNYVQYPAPQARYEDVASDPKLFMSTLESLHAAMGTKFMIPIIGGRELDLHRLFVEV 75
Query: 313 T 315
T
Sbjct: 76 T 76
>ref|XP_006493048.1| PREDICTED: high mobility group B protein 15-like isoform X1 [Citrus
sinensis] gi|568880261|ref|XP_006493049.1| PREDICTED:
high mobility group B protein 15-like isoform X2 [Citrus
sinensis] gi|568880263|ref|XP_006493050.1| PREDICTED:
high mobility group B protein 15-like isoform X3 [Citrus
sinensis]
Length = 448
Score = 76.3 bits (186), Expect = 4e-12
Identities = 34/53 (64%), Positives = 40/53 (75%)
Frame = +1
Query: 157 YPEPLAKYEDVIADPKLFTETLEDFHSRVGTKLRVPTVGGKELDLHCLFVEVT 315
YP PLAKYED++ PKLF TLE H+ + TK +P +GGKELDLH LFVEVT
Sbjct: 24 YPPPLAKYEDIVVCPKLFMATLEKLHAAMSTKFMIPIIGGKELDLHRLFVEVT 76
>ref|XP_004497360.1| PREDICTED: high mobility group B protein 15-like isoform X1 [Cicer
arietinum] gi|502121541|ref|XP_004497361.1| PREDICTED:
high mobility group B protein 15-like isoform X2 [Cicer
arietinum] gi|502121543|ref|XP_004497362.1| PREDICTED:
high mobility group B protein 15-like isoform X3 [Cicer
arietinum] gi|502121545|ref|XP_004497363.1| PREDICTED:
high mobility group B protein 15-like isoform X4 [Cicer
arietinum] gi|502121547|ref|XP_004497364.1| PREDICTED:
high mobility group B protein 15-like isoform X5 [Cicer
arietinum]
Length = 423
Score = 75.1 bits (183), Expect = 9e-12
Identities = 34/61 (55%), Positives = 44/61 (72%)
Frame = +1
Query: 133 ETVMVDHHYPEPLAKYEDVIADPKLFTETLEDFHSRVGTKLRVPTVGGKELDLHCLFVEV 312
ET M YP P+A YE+V+ +PKLF +LE H+ +GTK +P +GG+ELDLH LFVEV
Sbjct: 16 ETAMSYGEYPSPMATYEEVVDNPKLFMLSLEKLHALMGTKFMIPVIGGRELDLHRLFVEV 75
Query: 313 T 315
T
Sbjct: 76 T 76
>gb|AFK33347.1| unknown [Medicago truncatula]
Length = 185
Score = 74.7 bits (182), Expect = 1e-11
Identities = 33/79 (41%), Positives = 50/79 (63%)
Frame = +1
Query: 79 MEENERGGEVAEKGKYDLETVMVDHHYPEPLAKYEDVIADPKLFTETLEDFHSRVGTKLR 258
+ +N+ + + + + E+ + YP P A Y D++ D LF + L+ FH +GTKL+
Sbjct: 3 INQNQNQNQNPNQNQCESESKSNTNPYPPPTAPYSDLVRDSNLFQQKLQSFHDSLGTKLK 62
Query: 259 VPTVGGKELDLHCLFVEVT 315
+PT+GGK LDLH LFVEVT
Sbjct: 63 IPTIGGKSLDLHHLFVEVT 81
>ref|XP_002307758.1| hypothetical protein POPTR_0005s26800g [Populus trichocarpa]
gi|222857207|gb|EEE94754.1| hypothetical protein
POPTR_0005s26800g [Populus trichocarpa]
Length = 329
Score = 74.7 bits (182), Expect = 1e-11
Identities = 34/65 (52%), Positives = 44/65 (67%)
Frame = +1
Query: 121 KYDLETVMVDHHYPEPLAKYEDVIADPKLFTETLEDFHSRVGTKLRVPTVGGKELDLHCL 300
K L+ M + HYP PLA +EDV+ DP +F +TL FH +GTK +P +GGKELDL L
Sbjct: 6 KRKLKAGMENKHYPAPLASHEDVVNDPSVFWDTLRRFHFVMGTKFMIPVIGGKELDLQVL 65
Query: 301 FVEVT 315
+VE T
Sbjct: 66 YVETT 70
>gb|AFK40606.1| unknown [Medicago truncatula]
Length = 234
Score = 74.3 bits (181), Expect = 2e-11
Identities = 33/79 (41%), Positives = 50/79 (63%)
Frame = +1
Query: 79 MEENERGGEVAEKGKYDLETVMVDHHYPEPLAKYEDVIADPKLFTETLEDFHSRVGTKLR 258
+ +N+ + + + + E+ + YP P A Y D++ D LF + L+ FH +GTKL+
Sbjct: 3 INQNQNQNQNPNQNQCESESKSNTNPYPPPTAPYSDLVRDSNLFQQKLQSFHDSLGTKLK 62
Query: 259 VPTVGGKELDLHCLFVEVT 315
+PT+GGK LDLH LFVEVT
Sbjct: 63 IPTIGGKPLDLHHLFVEVT 81
>ref|XP_003598285.1| AT-rich interactive domain-containing protein [Medicago truncatula]
gi|355487333|gb|AES68536.1| AT-rich interactive
domain-containing protein [Medicago truncatula]
Length = 274
Score = 74.3 bits (181), Expect = 2e-11
Identities = 33/79 (41%), Positives = 50/79 (63%)
Frame = +1
Query: 79 MEENERGGEVAEKGKYDLETVMVDHHYPEPLAKYEDVIADPKLFTETLEDFHSRVGTKLR 258
+ +N+ + + + + E+ + YP P A Y D++ D LF + L+ FH +GTKL+
Sbjct: 3 INQNQNQNQNPNQNQCESESKSNTNPYPPPTAPYSDLVRDSNLFQQKLQSFHDSLGTKLK 62
Query: 259 VPTVGGKELDLHCLFVEVT 315
+PT+GGK LDLH LFVEVT
Sbjct: 63 IPTIGGKPLDLHHLFVEVT 81
>gb|ABK24816.1| unknown [Picea sitchensis]
Length = 481
Score = 73.9 bits (180), Expect = 2e-11
Identities = 33/53 (62%), Positives = 41/53 (77%)
Frame = +1
Query: 157 YPEPLAKYEDVIADPKLFTETLEDFHSRVGTKLRVPTVGGKELDLHCLFVEVT 315
YP P+AK+E+V+A LF +TL FH+ VGTK VP +GGKELDLH L+VEVT
Sbjct: 56 YPSPVAKHEEVVAKGSLFLQTLGKFHATVGTKFMVPVIGGKELDLHLLYVEVT 108
>ref|XP_003592799.1| High mobility group protein B3 [Medicago truncatula]
gi|355481847|gb|AES63050.1| High mobility group protein
B3 [Medicago truncatula]
Length = 417
Score = 73.6 bits (179), Expect = 3e-11
Identities = 33/61 (54%), Positives = 43/61 (70%)
Frame = +1
Query: 133 ETVMVDHHYPEPLAKYEDVIADPKLFTETLEDFHSRVGTKLRVPTVGGKELDLHCLFVEV 312
ET + YP P+A YE+V+ +PKLF LE H+ +GTK +P +GG+ELDLH LFVEV
Sbjct: 16 ETALSHGEYPPPMATYEEVVDNPKLFILCLEKLHTLMGTKFMIPVIGGRELDLHRLFVEV 75
Query: 313 T 315
T
Sbjct: 76 T 76