BLASTX nr result
ID: Zingiber24_contig00032555
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00032555
(627 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAA69305.1| mitochondrial single-subunit DNA-dependent RNA p... 119 9e-25
ref|XP_002315996.2| DNA-directed RNA polymerase family protein [... 118 1e-24
gb|EOY01553.1| DNA-directed RNA polymerase isoform 1 [Theobroma ... 118 1e-24
emb|CAC80138.1| DNA-dependent RNA polymerase [Spinacia oleracea] 118 1e-24
gb|EMJ16117.1| hypothetical protein PRUPE_ppa000719mg [Prunus pe... 118 2e-24
ref|NP_177063.1| DNA-directed RNA polymerase 1, mitochondrial [A... 118 2e-24
ref|NP_001185355.1| DNA-directed RNA polymerase 1, mitochondrial... 118 2e-24
gb|EMJ26582.1| hypothetical protein PRUPE_ppa000780mg [Prunus pe... 117 2e-24
sp|Q8L6J5.2|RPO1B_TOBAC RecName: Full=DNA-directed RNA polymeras... 117 2e-24
ref|XP_002533595.1| DNA-directed RNA polymerase 2B, chloroplast/... 117 2e-24
emb|CAC82574.2| phage-type RNA polymerase [Nicotiana tabacum] 117 2e-24
emb|CAC95022.1| mitochondrial RNA polymerase [Nicotiana tabacum] 117 2e-24
ref|XP_004141596.1| PREDICTED: DNA-directed RNA polymerase 2, ch... 117 3e-24
emb|CAA69331.1| mitochondrial single-subunit DNA-dependent RNA p... 117 3e-24
ref|XP_003531932.1| PREDICTED: DNA-directed RNA polymerase 1B, m... 117 3e-24
emb|CBI27412.3| unnamed protein product [Vitis vinifera] 117 3e-24
ref|XP_002267464.1| PREDICTED: DNA-directed RNA polymerase 1, mi... 117 3e-24
gb|ESW28387.1| hypothetical protein PHAVU_003G282700g [Phaseolus... 116 5e-24
ref|XP_004304185.1| PREDICTED: DNA-directed RNA polymerase 2, ch... 116 5e-24
ref|XP_004491959.1| PREDICTED: DNA-directed RNA polymerase 2, ch... 116 6e-24
>emb|CAA69305.1| mitochondrial single-subunit DNA-dependent RNA polymerase
[Chenopodium album]
Length = 988
Score = 119 bits (297), Expect = 9e-25
Identities = 53/65 (81%), Positives = 62/65 (95%)
Frame = -2
Query: 626 WTHACNVDQMNVILREKFVELYQKPILENLLESFQQSFPTLNFPPLPERGDFNLRDVLDS 447
WTHAC+VD+MN ILREKFVELY++PILENLLESFQ+SFPTL FPPLPERGDF+LR+VL+S
Sbjct: 924 WTHACDVDKMNQILREKFVELYEQPILENLLESFQESFPTLQFPPLPERGDFDLREVLES 983
Query: 446 TFFFN 432
+FFN
Sbjct: 984 PYFFN 988
>ref|XP_002315996.2| DNA-directed RNA polymerase family protein [Populus trichocarpa]
gi|550329816|gb|EEF02167.2| DNA-directed RNA polymerase
family protein [Populus trichocarpa]
Length = 862
Score = 118 bits (296), Expect = 1e-24
Identities = 54/65 (83%), Positives = 59/65 (90%)
Frame = -2
Query: 626 WTHACNVDQMNVILREKFVELYQKPILENLLESFQQSFPTLNFPPLPERGDFNLRDVLDS 447
WTHAC+VD+MN ILREKFVELY+ PILENLLESFQ SFP L FPPLPERGDF+LRDVL S
Sbjct: 798 WTHACDVDEMNRILREKFVELYETPILENLLESFQSSFPNLKFPPLPERGDFDLRDVLQS 857
Query: 446 TFFFN 432
T+FFN
Sbjct: 858 TYFFN 862
>gb|EOY01553.1| DNA-directed RNA polymerase isoform 1 [Theobroma cacao]
gi|508709657|gb|EOY01554.1| DNA-directed RNA polymerase
isoform 1 [Theobroma cacao]
Length = 996
Score = 118 bits (296), Expect = 1e-24
Identities = 53/65 (81%), Positives = 62/65 (95%)
Frame = -2
Query: 626 WTHACNVDQMNVILREKFVELYQKPILENLLESFQQSFPTLNFPPLPERGDFNLRDVLDS 447
WTHAC+VD+MN ILREKFVELY+ PILENLLESFQ+SFP+LNFPPLPERGDF+LR+VL+S
Sbjct: 932 WTHACDVDEMNRILREKFVELYEAPILENLLESFQKSFPSLNFPPLPERGDFDLREVLES 991
Query: 446 TFFFN 432
+FFN
Sbjct: 992 PYFFN 996
>emb|CAC80138.1| DNA-dependent RNA polymerase [Spinacia oleracea]
Length = 1036
Score = 118 bits (296), Expect = 1e-24
Identities = 53/65 (81%), Positives = 61/65 (93%)
Frame = -2
Query: 626 WTHACNVDQMNVILREKFVELYQKPILENLLESFQQSFPTLNFPPLPERGDFNLRDVLDS 447
WTHAC+VDQM+ ILREKFVELY +PILENLLE+FQQS+PTL+FPPLP+RGDF LRDVLDS
Sbjct: 972 WTHACDVDQMSSILREKFVELYDQPILENLLETFQQSYPTLSFPPLPDRGDFELRDVLDS 1031
Query: 446 TFFFN 432
+FFN
Sbjct: 1032 PYFFN 1036
>gb|EMJ16117.1| hypothetical protein PRUPE_ppa000719mg [Prunus persica]
Length = 1024
Score = 118 bits (295), Expect = 2e-24
Identities = 53/65 (81%), Positives = 60/65 (92%)
Frame = -2
Query: 626 WTHACNVDQMNVILREKFVELYQKPILENLLESFQQSFPTLNFPPLPERGDFNLRDVLDS 447
WTHAC+VD+MN ILREKFV+LY+ PILENLLESFQQSFP L FPPLPERGDF+LRDVL+S
Sbjct: 960 WTHACDVDEMNKILREKFVQLYETPILENLLESFQQSFPALTFPPLPERGDFDLRDVLES 1019
Query: 446 TFFFN 432
+FFN
Sbjct: 1020 PYFFN 1024
>ref|NP_177063.1| DNA-directed RNA polymerase 1, mitochondrial [Arabidopsis thaliana]
gi|3914832|sp|P92969.1|RPOT1_ARATH RecName:
Full=DNA-directed RNA polymerase 1, mitochondrial; Flags:
Precursor gi|12323220|gb|AAG51592.1|AC011665_13
DNA-directed RNA polymerase [Arabidopsis thaliana]
gi|1742971|emb|CAA70583.1| mitochondrial singel subunit
DNA-directed RNA polymerase [Arabidopsis thaliana]
gi|2330566|emb|CAA70210.1| mitochondrial single-subunit
DNA-dependent RNA polymerase [Arabidopsis thaliana]
gi|332196752|gb|AEE34873.1| DNA-directed RNA polymerase
1, mitochondrial [Arabidopsis thaliana]
Length = 976
Score = 118 bits (295), Expect = 2e-24
Identities = 53/65 (81%), Positives = 61/65 (93%)
Frame = -2
Query: 626 WTHACNVDQMNVILREKFVELYQKPILENLLESFQQSFPTLNFPPLPERGDFNLRDVLDS 447
WTHAC+VD MN ILREKFVELY+KPILENLLESFQ+SFP ++FPPLPERGDF+LR VL+S
Sbjct: 912 WTHACDVDVMNTILREKFVELYEKPILENLLESFQKSFPDISFPPLPERGDFDLRKVLES 971
Query: 446 TFFFN 432
T+FFN
Sbjct: 972 TYFFN 976
>ref|NP_001185355.1| DNA-directed RNA polymerase 1, mitochondrial [Arabidopsis thaliana]
gi|332196753|gb|AEE34874.1| DNA-directed RNA polymerase
1, mitochondrial [Arabidopsis thaliana]
Length = 983
Score = 118 bits (295), Expect = 2e-24
Identities = 53/65 (81%), Positives = 61/65 (93%)
Frame = -2
Query: 626 WTHACNVDQMNVILREKFVELYQKPILENLLESFQQSFPTLNFPPLPERGDFNLRDVLDS 447
WTHAC+VD MN ILREKFVELY+KPILENLLESFQ+SFP ++FPPLPERGDF+LR VL+S
Sbjct: 919 WTHACDVDVMNTILREKFVELYEKPILENLLESFQKSFPDISFPPLPERGDFDLRKVLES 978
Query: 446 TFFFN 432
T+FFN
Sbjct: 979 TYFFN 983
>gb|EMJ26582.1| hypothetical protein PRUPE_ppa000780mg [Prunus persica]
Length = 1006
Score = 117 bits (294), Expect = 2e-24
Identities = 52/65 (80%), Positives = 60/65 (92%)
Frame = -2
Query: 626 WTHACNVDQMNVILREKFVELYQKPILENLLESFQQSFPTLNFPPLPERGDFNLRDVLDS 447
WTHAC++D+MN ILREKFVELY+ PILENLLE FQQSFPTL FPPLP+RGDF+LRDVL+S
Sbjct: 942 WTHACDIDEMNRILREKFVELYEAPILENLLEGFQQSFPTLTFPPLPDRGDFDLRDVLES 1001
Query: 446 TFFFN 432
+FFN
Sbjct: 1002 PYFFN 1006
>sp|Q8L6J5.2|RPO1B_TOBAC RecName: Full=DNA-directed RNA polymerase 1B, mitochondrial; AltName:
Full=NictaRpoT1-tom; AltName: Full=T7 bacteriophage-type
single subunit RNA polymerase 1B; Flags: Precursor
Length = 1002
Score = 117 bits (294), Expect = 2e-24
Identities = 54/65 (83%), Positives = 59/65 (90%)
Frame = -2
Query: 626 WTHACNVDQMNVILREKFVELYQKPILENLLESFQQSFPTLNFPPLPERGDFNLRDVLDS 447
WTHAC+VDQMN ILREKFVELY PILENLLESFQQSFP L FPPLPERGDF+LR+VL+S
Sbjct: 938 WTHACDVDQMNKILREKFVELYDAPILENLLESFQQSFPDLQFPPLPERGDFDLREVLES 997
Query: 446 TFFFN 432
+FFN
Sbjct: 998 PYFFN 1002
>ref|XP_002533595.1| DNA-directed RNA polymerase 2B, chloroplast/mitochondrial
precursor, putative [Ricinus communis]
gi|223526524|gb|EEF28786.1| DNA-directed RNA polymerase
2B, chloroplast/mitochondrial precursor, putative
[Ricinus communis]
Length = 589
Score = 117 bits (294), Expect = 2e-24
Identities = 53/65 (81%), Positives = 61/65 (93%)
Frame = -2
Query: 626 WTHACNVDQMNVILREKFVELYQKPILENLLESFQQSFPTLNFPPLPERGDFNLRDVLDS 447
WTHAC+VD+MN ILREKFVELY+ P+LENLLESFQQSFPTL+FPPLPERGDF+L+DVL S
Sbjct: 525 WTHACDVDKMNRILREKFVELYETPVLENLLESFQQSFPTLSFPPLPERGDFDLQDVLKS 584
Query: 446 TFFFN 432
+FFN
Sbjct: 585 PYFFN 589
>emb|CAC82574.2| phage-type RNA polymerase [Nicotiana tabacum]
Length = 1002
Score = 117 bits (294), Expect = 2e-24
Identities = 54/65 (83%), Positives = 59/65 (90%)
Frame = -2
Query: 626 WTHACNVDQMNVILREKFVELYQKPILENLLESFQQSFPTLNFPPLPERGDFNLRDVLDS 447
WTHAC+VDQMN ILREKFVELY PILENLLESFQQSFP L FPPLPERGDF+LR+VL+S
Sbjct: 938 WTHACDVDQMNKILREKFVELYDAPILENLLESFQQSFPDLQFPPLPERGDFDLREVLES 997
Query: 446 TFFFN 432
+FFN
Sbjct: 998 PYFFN 1002
>emb|CAC95022.1| mitochondrial RNA polymerase [Nicotiana tabacum]
Length = 715
Score = 117 bits (294), Expect = 2e-24
Identities = 54/65 (83%), Positives = 59/65 (90%)
Frame = -2
Query: 626 WTHACNVDQMNVILREKFVELYQKPILENLLESFQQSFPTLNFPPLPERGDFNLRDVLDS 447
WTHAC+VDQMN ILREKFVELY PILENLLESFQQSFP L FPPLPERGDF+LR+VL+S
Sbjct: 651 WTHACDVDQMNKILREKFVELYDAPILENLLESFQQSFPDLQFPPLPERGDFDLREVLES 710
Query: 446 TFFFN 432
+FFN
Sbjct: 711 PYFFN 715
>ref|XP_004141596.1| PREDICTED: DNA-directed RNA polymerase 2,
chloroplastic/mitochondrial-like [Cucumis sativus]
Length = 984
Score = 117 bits (293), Expect = 3e-24
Identities = 52/65 (80%), Positives = 61/65 (93%)
Frame = -2
Query: 626 WTHACNVDQMNVILREKFVELYQKPILENLLESFQQSFPTLNFPPLPERGDFNLRDVLDS 447
WTHAC+VD+MN ILREKFVELY+ PILENLLESF+QSFP L+FPPLPERG+FNL++VLDS
Sbjct: 920 WTHACDVDEMNRILREKFVELYETPILENLLESFEQSFPALDFPPLPERGEFNLKEVLDS 979
Query: 446 TFFFN 432
+FFN
Sbjct: 980 PYFFN 984
>emb|CAA69331.1| mitochondrial single-subunit DNA-dependent RNA polymerase
[Arabidopsis thaliana]
Length = 976
Score = 117 bits (293), Expect = 3e-24
Identities = 52/65 (80%), Positives = 61/65 (93%)
Frame = -2
Query: 626 WTHACNVDQMNVILREKFVELYQKPILENLLESFQQSFPTLNFPPLPERGDFNLRDVLDS 447
WTHAC+VD MN +LREKFVELY+KPILENLLESFQ+SFP ++FPPLPERGDF+LR VL+S
Sbjct: 912 WTHACDVDIMNTVLREKFVELYEKPILENLLESFQKSFPDISFPPLPERGDFDLRKVLES 971
Query: 446 TFFFN 432
T+FFN
Sbjct: 972 TYFFN 976
>ref|XP_003531932.1| PREDICTED: DNA-directed RNA polymerase 1B, mitochondrial-like
[Glycine max]
Length = 949
Score = 117 bits (292), Expect = 3e-24
Identities = 52/65 (80%), Positives = 61/65 (93%)
Frame = -2
Query: 626 WTHACNVDQMNVILREKFVELYQKPILENLLESFQQSFPTLNFPPLPERGDFNLRDVLDS 447
WTHAC+VD+MN ILREKFVELY PILENLLESFQ++FP LNFPPLPERGDF+L++VL+S
Sbjct: 885 WTHACDVDEMNRILREKFVELYDAPILENLLESFQKTFPALNFPPLPERGDFDLQEVLES 944
Query: 446 TFFFN 432
T+FFN
Sbjct: 945 TYFFN 949
>emb|CBI27412.3| unnamed protein product [Vitis vinifera]
Length = 810
Score = 117 bits (292), Expect = 3e-24
Identities = 53/65 (81%), Positives = 60/65 (92%)
Frame = -2
Query: 626 WTHACNVDQMNVILREKFVELYQKPILENLLESFQQSFPTLNFPPLPERGDFNLRDVLDS 447
WTHAC+VD+MN ILREKFVELY PILENLLE FQ+SFPTLNFPPLPERGDF+LR+VL+S
Sbjct: 746 WTHACDVDEMNRILREKFVELYGMPILENLLEGFQKSFPTLNFPPLPERGDFDLREVLES 805
Query: 446 TFFFN 432
+FFN
Sbjct: 806 PYFFN 810
>ref|XP_002267464.1| PREDICTED: DNA-directed RNA polymerase 1, mitochondrial [Vitis
vinifera]
Length = 978
Score = 117 bits (292), Expect = 3e-24
Identities = 53/65 (81%), Positives = 60/65 (92%)
Frame = -2
Query: 626 WTHACNVDQMNVILREKFVELYQKPILENLLESFQQSFPTLNFPPLPERGDFNLRDVLDS 447
WTHAC+VD+MN ILREKFVELY PILENLLE FQ+SFPTLNFPPLPERGDF+LR+VL+S
Sbjct: 914 WTHACDVDEMNRILREKFVELYGMPILENLLEGFQKSFPTLNFPPLPERGDFDLREVLES 973
Query: 446 TFFFN 432
+FFN
Sbjct: 974 PYFFN 978
>gb|ESW28387.1| hypothetical protein PHAVU_003G282700g [Phaseolus vulgaris]
Length = 959
Score = 116 bits (291), Expect = 5e-24
Identities = 52/65 (80%), Positives = 61/65 (93%)
Frame = -2
Query: 626 WTHACNVDQMNVILREKFVELYQKPILENLLESFQQSFPTLNFPPLPERGDFNLRDVLDS 447
WTHAC+VD+MN ILREKFVELY+ PILENL ESFQ++FPTLNFPPLP RGDF+LR+VL+S
Sbjct: 895 WTHACDVDEMNRILREKFVELYEAPILENLSESFQKNFPTLNFPPLPARGDFDLREVLES 954
Query: 446 TFFFN 432
T+FFN
Sbjct: 955 TYFFN 959
>ref|XP_004304185.1| PREDICTED: DNA-directed RNA polymerase 2,
chloroplastic/mitochondrial-like [Fragaria vesca subsp.
vesca]
Length = 1262
Score = 116 bits (291), Expect = 5e-24
Identities = 54/65 (83%), Positives = 58/65 (89%)
Frame = -2
Query: 626 WTHACNVDQMNVILREKFVELYQKPILENLLESFQQSFPTLNFPPLPERGDFNLRDVLDS 447
WTHAC+VD MN ILREKFVELY+ PILE LLESFQQSFPTL FPPLPERGDF LRDVL+S
Sbjct: 1198 WTHACDVDVMNRILREKFVELYETPILERLLESFQQSFPTLTFPPLPERGDFELRDVLES 1257
Query: 446 TFFFN 432
+FFN
Sbjct: 1258 PYFFN 1262
>ref|XP_004491959.1| PREDICTED: DNA-directed RNA polymerase 2,
chloroplastic/mitochondrial-like isoform X3 [Cicer
arietinum]
Length = 1053
Score = 116 bits (290), Expect = 6e-24
Identities = 52/65 (80%), Positives = 60/65 (92%)
Frame = -2
Query: 626 WTHACNVDQMNVILREKFVELYQKPILENLLESFQQSFPTLNFPPLPERGDFNLRDVLDS 447
WTHAC+VD MN ILREKFVELY+ PILENLLESFQ+SFP+L FPPLPERGDF+LR+VL+S
Sbjct: 989 WTHACDVDNMNKILREKFVELYETPILENLLESFQESFPSLQFPPLPERGDFDLREVLES 1048
Query: 446 TFFFN 432
+FFN
Sbjct: 1049 PYFFN 1053