BLASTX nr result

ID: Zingiber24_contig00032420 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00032420
         (388 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI35953.3| unnamed protein product [Vitis vinifera]               59   9e-07
ref|XP_002279880.2| PREDICTED: uncharacterized protein LOC100266...    56   6e-06
emb|CAN78642.1| hypothetical protein VITISV_031741 [Vitis vinifera]    56   6e-06

>emb|CBI35953.3| unnamed protein product [Vitis vinifera]
          Length = 325

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 39/110 (35%), Positives = 46/110 (41%), Gaps = 6/110 (5%)
 Frame = +1

Query: 76  SETEMADGVYPPSKTTP------RPGGHSFPPTKSQATGATRLAYRPHPXXXXXXXXXXX 237
           ++T M D VYP S   P        G +SFP TK+Q  GATR AYRP P           
Sbjct: 69  NQTAMTDRVYPKSTAHPPQPLNGSAGTNSFPATKAQLYGATRPAYRPQP-------QRRS 121

Query: 238 XXXXXXXXXXXXXXXXXXXXXXXXXGGIFYALYRPRRPAFSVTSFRVVAF 387
                                      IFY LYRP RP+F+VTS R+  F
Sbjct: 122 RSRCCSCCLWFTFVILSILVLAAIASAIFYVLYRPHRPSFAVTSLRISQF 171


>ref|XP_002279880.2| PREDICTED: uncharacterized protein LOC100266920 [Vitis vinifera]
          Length = 1753

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 38/106 (35%), Positives = 43/106 (40%), Gaps = 6/106 (5%)
 Frame = +1

Query: 88  MADGVYPPSKTTP------RPGGHSFPPTKSQATGATRLAYRPHPXXXXXXXXXXXXXXX 249
           M D VYP S   P        G +SFP TK+Q  GATR AYRP P               
Sbjct: 1   MTDRVYPKSTAHPPQPLNGSAGTNSFPATKAQLYGATRPAYRPQP-------QRRSRSRC 53

Query: 250 XXXXXXXXXXXXXXXXXXXXXGGIFYALYRPRRPAFSVTSFRVVAF 387
                                  IFY LYRP RP+F+VTS R+  F
Sbjct: 54  CSCCLWFTFVILSILVLAAIASAIFYVLYRPHRPSFAVTSLRISQF 99


>emb|CAN78642.1| hypothetical protein VITISV_031741 [Vitis vinifera]
          Length = 253

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 38/106 (35%), Positives = 43/106 (40%), Gaps = 6/106 (5%)
 Frame = +1

Query: 88  MADGVYPPSKTTP------RPGGHSFPPTKSQATGATRLAYRPHPXXXXXXXXXXXXXXX 249
           M D VYP S   P        G +SFP TK+Q  GATR AYRP P               
Sbjct: 1   MTDRVYPKSTAHPPQPLNGSAGTNSFPATKAQLYGATRPAYRPQP-------QRRSRSRC 53

Query: 250 XXXXXXXXXXXXXXXXXXXXXGGIFYALYRPRRPAFSVTSFRVVAF 387
                                  IFY LYRP RP+F+VTS R+  F
Sbjct: 54  CSCCLWFTFVILSILVLAAIASAIFYVLYRPHRPSFAVTSLRISQF 99


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