BLASTX nr result

ID: Zingiber24_contig00032408 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00032408
         (565 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AGB52036.1| putative zinc finger transcription factor, partia...    65   9e-09
ref|XP_002277632.2| PREDICTED: zinc finger CCCH domain-containin...    62   1e-07
emb|CBI15944.3| unnamed protein product [Vitis vinifera]               62   1e-07
emb|CAN78824.1| hypothetical protein VITISV_006556 [Vitis vinifera]    62   1e-07
ref|XP_006488540.1| PREDICTED: zinc finger CCCH domain-containin...    59   1e-06
ref|XP_006488539.1| PREDICTED: zinc finger CCCH domain-containin...    59   1e-06
ref|XP_006425080.1| hypothetical protein CICLE_v10027883mg [Citr...    59   1e-06
ref|XP_006425079.1| hypothetical protein CICLE_v10027883mg [Citr...    59   1e-06
ref|XP_002525655.1| transcription factor, putative [Ricinus comm...    57   2e-06
gb|ADL36657.1| C3HL domain class transcription factor [Malus dom...    56   5e-06
gb|ESW14199.1| hypothetical protein PHAVU_008G260900g [Phaseolus...    56   7e-06

>gb|AGB52036.1| putative zinc finger transcription factor, partial [Elaeis
           guineensis]
          Length = 605

 Score = 65.5 bits (158), Expect = 9e-09
 Identities = 40/88 (45%), Positives = 50/88 (56%), Gaps = 14/88 (15%)
 Frame = +3

Query: 3   NKLRKSVSFAHRGNQGTPN--GVSTAT-VAAGDNEPDLSWVHSLVKDGPVATGGQIGAGY 173
           NKLRKS S   R NQG     G + AT V  G +EPDLSWV SLVKDGP A  G+ G   
Sbjct: 517 NKLRKSASLNFRNNQGGSGFGGAAPATAVPGGLDEPDLSWVQSLVKDGPAAPIGRRGLEQ 576

Query: 174 QQNGYQ-----------DIYAPWAEEHM 224
           Q+ GY+           ++++PW E+ M
Sbjct: 577 QRKGYKLNGGGGDFHGSELFSPWEEKIM 604


>ref|XP_002277632.2| PREDICTED: zinc finger CCCH domain-containing protein 66-like
           isoform 1 [Vitis vinifera]
          Length = 693

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 35/77 (45%), Positives = 43/77 (55%), Gaps = 5/77 (6%)
 Frame = +3

Query: 3   NKLRKSVSFAHRGNQGTPNGVSTATVAAGDNEPDLSWVHSLVKDGPVATGGQIGAGYQ-- 176
           NKLRKS SF  R N G+      A+V A  +EPD+SWV SLVK+ P A  GQ G   Q  
Sbjct: 608 NKLRKSASFGFRSN-GSSYAAQAASVPAAADEPDVSWVQSLVKEAPSARPGQFGYEEQHQ 666

Query: 177 ---QNGYQDIYAPWAEE 218
               +G  +I  PW E+
Sbjct: 667 YHLNSGGSEILPPWVEQ 683


>emb|CBI15944.3| unnamed protein product [Vitis vinifera]
          Length = 752

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 35/77 (45%), Positives = 43/77 (55%), Gaps = 5/77 (6%)
 Frame = +3

Query: 3   NKLRKSVSFAHRGNQGTPNGVSTATVAAGDNEPDLSWVHSLVKDGPVATGGQIGAGYQ-- 176
           NKLRKS SF  R N G+      A+V A  +EPD+SWV SLVK+ P A  GQ G   Q  
Sbjct: 667 NKLRKSASFGFRSN-GSSYAAQAASVPAAADEPDVSWVQSLVKEAPSARPGQFGYEEQHQ 725

Query: 177 ---QNGYQDIYAPWAEE 218
               +G  +I  PW E+
Sbjct: 726 YHLNSGGSEILPPWVEQ 742


>emb|CAN78824.1| hypothetical protein VITISV_006556 [Vitis vinifera]
          Length = 893

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 35/77 (45%), Positives = 43/77 (55%), Gaps = 5/77 (6%)
 Frame = +3

Query: 3    NKLRKSVSFAHRGNQGTPNGVSTATVAAGDNEPDLSWVHSLVKDGPVATGGQIGAGYQ-- 176
            NKLRKS SF  R N G+      A+V A  +EPD+SWV SLVK+ P A  GQ G   Q  
Sbjct: 808  NKLRKSASFGFRSN-GSSYAAQAASVPAAADEPDVSWVQSLVKEAPSARPGQFGYEEQHQ 866

Query: 177  ---QNGYQDIYAPWAEE 218
                +G  +I  PW E+
Sbjct: 867  YHLNSGGSEILPPWVEQ 883


>ref|XP_006488540.1| PREDICTED: zinc finger CCCH domain-containing protein 66-like
           isoform X2 [Citrus sinensis]
          Length = 705

 Score = 58.5 bits (140), Expect = 1e-06
 Identities = 34/76 (44%), Positives = 42/76 (55%), Gaps = 4/76 (5%)
 Frame = +3

Query: 3   NKLRKSVSFAHRGNQGTPNGVSTATVAAGDNEPDLSWVHSLVKDGPVATGGQIGAGYQQ- 179
           NKLRKS SF  R N G+     T+T A  D EPD+SWV SLV+D P    GQ G   QQ 
Sbjct: 621 NKLRKSASFGIRSNGGSVATSETSTPATAD-EPDVSWVQSLVRDSPSIMSGQFGFEEQQC 679

Query: 180 ---NGYQDIYAPWAEE 218
              +G  ++   W E+
Sbjct: 680 HLNSGGSEMLPAWVEQ 695


>ref|XP_006488539.1| PREDICTED: zinc finger CCCH domain-containing protein 66-like
           isoform X1 [Citrus sinensis]
          Length = 774

 Score = 58.5 bits (140), Expect = 1e-06
 Identities = 34/76 (44%), Positives = 42/76 (55%), Gaps = 4/76 (5%)
 Frame = +3

Query: 3   NKLRKSVSFAHRGNQGTPNGVSTATVAAGDNEPDLSWVHSLVKDGPVATGGQIGAGYQQ- 179
           NKLRKS SF  R N G+     T+T A  D EPD+SWV SLV+D P    GQ G   QQ 
Sbjct: 690 NKLRKSASFGIRSNGGSVATSETSTPATAD-EPDVSWVQSLVRDSPSIMSGQFGFEEQQC 748

Query: 180 ---NGYQDIYAPWAEE 218
              +G  ++   W E+
Sbjct: 749 HLNSGGSEMLPAWVEQ 764


>ref|XP_006425080.1| hypothetical protein CICLE_v10027883mg [Citrus clementina]
           gi|557527014|gb|ESR38320.1| hypothetical protein
           CICLE_v10027883mg [Citrus clementina]
          Length = 741

 Score = 58.5 bits (140), Expect = 1e-06
 Identities = 34/76 (44%), Positives = 42/76 (55%), Gaps = 4/76 (5%)
 Frame = +3

Query: 3   NKLRKSVSFAHRGNQGTPNGVSTATVAAGDNEPDLSWVHSLVKDGPVATGGQIGAGYQQ- 179
           NKLRKS SF  R N G+     T+T A  D EPD+SWV SLV+D P    GQ G   QQ 
Sbjct: 657 NKLRKSASFGIRSNGGSVATSETSTPATAD-EPDVSWVQSLVRDSPSIRSGQFGFEEQQC 715

Query: 180 ---NGYQDIYAPWAEE 218
              +G  ++   W E+
Sbjct: 716 HLNSGGSEMLPAWVEQ 731


>ref|XP_006425079.1| hypothetical protein CICLE_v10027883mg [Citrus clementina]
           gi|557527013|gb|ESR38319.1| hypothetical protein
           CICLE_v10027883mg [Citrus clementina]
          Length = 705

 Score = 58.5 bits (140), Expect = 1e-06
 Identities = 34/76 (44%), Positives = 42/76 (55%), Gaps = 4/76 (5%)
 Frame = +3

Query: 3   NKLRKSVSFAHRGNQGTPNGVSTATVAAGDNEPDLSWVHSLVKDGPVATGGQIGAGYQQ- 179
           NKLRKS SF  R N G+     T+T A  D EPD+SWV SLV+D P    GQ G   QQ 
Sbjct: 621 NKLRKSASFGIRSNGGSVATSETSTPATAD-EPDVSWVQSLVRDSPSIRSGQFGFEEQQC 679

Query: 180 ---NGYQDIYAPWAEE 218
              +G  ++   W E+
Sbjct: 680 HLNSGGSEMLPAWVEQ 695


>ref|XP_002525655.1| transcription factor, putative [Ricinus communis]
           gi|223535091|gb|EEF36773.1| transcription factor,
           putative [Ricinus communis]
          Length = 702

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 33/77 (42%), Positives = 42/77 (54%), Gaps = 5/77 (6%)
 Frame = +3

Query: 3   NKLRKSVSFAHRGNQGTPNGVSTATVAAGDNEPDLSWVHSLVKDGPVATGGQIGAGYQQ- 179
           NKLRKS SF  R N G   G +  ++ A  N PD+SWV SLVKD P  +  Q+G   QQ 
Sbjct: 618 NKLRKSASFGIRNNGGA--GAAATSLPATLNAPDVSWVQSLVKDAPSTSPRQLGFEEQQQ 675

Query: 180 ----NGYQDIYAPWAEE 218
                G  +I+  W E+
Sbjct: 676 CHLNTGNSEIFPAWVEQ 692


>gb|ADL36657.1| C3HL domain class transcription factor [Malus domestica]
          Length = 706

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 34/81 (41%), Positives = 46/81 (56%), Gaps = 9/81 (11%)
 Frame = +3

Query: 3   NKLRKSVSFAHRGNQGTPNGVSTATVAAGDNEPDLSWVHSLVKDGPVAT--GGQIGAGYQ 176
           NKLRKS SF  R N G+ +  +++ +    +EPD+SWV SLVKDGP A+   GQ G   Q
Sbjct: 617 NKLRKSASFGFRSN-GSSSPTASSMMPTNGDEPDVSWVQSLVKDGPQASQQRGQFGFEDQ 675

Query: 177 Q-------NGYQDIYAPWAEE 218
           Q       NG  ++   W E+
Sbjct: 676 QQQQCHPNNGGPEMLPAWVEQ 696


>gb|ESW14199.1| hypothetical protein PHAVU_008G260900g [Phaseolus vulgaris]
          Length = 689

 Score = 55.8 bits (133), Expect = 7e-06
 Identities = 32/72 (44%), Positives = 41/72 (56%)
 Frame = +3

Query: 3   NKLRKSVSFAHRGNQGTPNGVSTATVAAGDNEPDLSWVHSLVKDGPVATGGQIGAGYQQN 182
           NKLRKS SF  R +  +    ST   A  D+EPD+SWV+SLVKD P  +G +       N
Sbjct: 609 NKLRKSASFGFRSSNSSITVASTKMAANVDDEPDVSWVNSLVKDAPPESGVEDQPKQCHN 668

Query: 183 GYQDIYAPWAEE 218
           G + I A W E+
Sbjct: 669 GTETIPA-WMEQ 679


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