BLASTX nr result

ID: Zingiber24_contig00032329 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00032329
         (307 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAK07262.1| predicted protein [Hordeum vulgare subsp. vulgare]     60   3e-07
ref|XP_003560274.1| PREDICTED: uncharacterized protein LOC100833...    57   3e-06
tpg|DAA51153.1| TPA: growth-regulating factor 1 isoform 1 [Zea m...    56   6e-06
ref|XP_002466526.1| hypothetical protein SORBIDRAFT_01g009330 [S...    56   6e-06
gb|ACR38369.1| unknown [Zea mays] gi|414872598|tpg|DAA51155.1| T...    56   6e-06
gb|ACN29235.1| unknown [Zea mays]                                      56   6e-06
gb|ACN28456.1| unknown [Zea mays]                                      56   6e-06
ref|NP_001152097.1| LOC100285734 [Zea mays] gi|195652595|gb|ACG4...    56   6e-06

>dbj|BAK07262.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 608

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 43/107 (40%), Positives = 58/107 (54%), Gaps = 9/107 (8%)
 Frame = +2

Query: 2   RKHVEGQSGHAAKTTP--VVASSQPASALPGGPCSGTLKVA-----QQQSKSLQSNIKDP 160
           RKHVEGQ GHAAK  P  V A++QP  AL  G C G    A     QQ  KS  +N  DP
Sbjct: 250 RKHVEGQPGHAAKAMPATVAAAAQP-GALAAGGCGGATAGAAIGHEQQPMKSYAANAIDP 308

Query: 161 HAVQYN-GMPSSNEEQNSYAQNSKSLPG-PSLICQSPHSNFYPISKQ 295
            ++QYN  M S  +++    Q+S SL    S+  ++   + +P SK+
Sbjct: 309 CSLQYNREMVSKQQQECEQVQDSDSLSMLTSMSARNTAGSMFPFSKE 355


>ref|XP_003560274.1| PREDICTED: uncharacterized protein LOC100833132 [Brachypodium
           distachyon]
          Length = 577

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 39/108 (36%), Positives = 54/108 (50%), Gaps = 6/108 (5%)
 Frame = +2

Query: 2   RKHVEGQSGHAAK---TTPVVASSQP---ASALPGGPCSGTLKVAQQQSKSLQSNIKDPH 163
           RKHVEGQ G AAK    T   A++QP   A+   G   S T+   QQ  K+   N  DP 
Sbjct: 240 RKHVEGQPGQAAKAMSATVAAAAAQPSAVATVGEGATASLTISHQQQPVKNYALNTIDPC 299

Query: 164 AVQYNGMPSSNEEQNSYAQNSKSLPGPSLICQSPHSNFYPISKQQAIF 307
           ++QYN    + + ++  AQ+S SL   + +      N +P SKQ   F
Sbjct: 300 SLQYNSELVNKQNESEQAQDSDSLSMLTSMSARSTGNLFPFSKQHKPF 347


>tpg|DAA51153.1| TPA: growth-regulating factor 1 isoform 1 [Zea mays]
           gi|414872597|tpg|DAA51154.1| TPA: growth-regulating
           factor 1 isoform 2 [Zea mays]
          Length = 457

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 36/105 (34%), Positives = 55/105 (52%), Gaps = 7/105 (6%)
 Frame = +2

Query: 2   RKHVEGQSGHAAKTTPVVASSQPASALP------GGPCSG-TLKVAQQQSKSLQSNIKDP 160
           RKHVEGQ GHAAK    VA++  A+A P      G P +G T+   Q  +KS  +   DP
Sbjct: 116 RKHVEGQPGHAAKAMSAVAAAAAAAAQPAALAGAGAPAAGLTVNQHQLPAKSYATGATDP 175

Query: 161 HAVQYNGMPSSNEEQNSYAQNSKSLPGPSLICQSPHSNFYPISKQ 295
            ++QYN    + + ++   Q+S +L   + +      + +P SKQ
Sbjct: 176 CSLQYNRELVNKQNESENMQDSDNLSMLTSMNTGNTGSVFPFSKQ 220


>ref|XP_002466526.1| hypothetical protein SORBIDRAFT_01g009330 [Sorghum bicolor]
           gi|241920380|gb|EER93524.1| hypothetical protein
           SORBIDRAFT_01g009330 [Sorghum bicolor]
          Length = 453

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 37/107 (34%), Positives = 55/107 (51%), Gaps = 5/107 (4%)
 Frame = +2

Query: 2   RKHVEGQSGHAAKTTPVV---ASSQPASALPGGPCSGTLKVAQQQ--SKSLQSNIKDPHA 166
           RKHVEGQ GHAAK    V   A++QPA+    G  +  L V Q Q  +KS  +   DP +
Sbjct: 116 RKHVEGQPGHAAKAMSAVVAAAATQPAALAGAGATAAGLTVNQHQQPAKSYATGAADPCS 175

Query: 167 VQYNGMPSSNEEQNSYAQNSKSLPGPSLICQSPHSNFYPISKQQAIF 307
           +QYN    + + ++   Q+S +L   + +      + +P SKQ   F
Sbjct: 176 LQYNRELVNKQNESENMQDSDNLSMLTSMTTGNTGSVFPFSKQNNPF 222


>gb|ACR38369.1| unknown [Zea mays] gi|414872598|tpg|DAA51155.1| TPA: hypothetical
           protein ZEAMMB73_866785 [Zea mays]
          Length = 350

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 36/105 (34%), Positives = 55/105 (52%), Gaps = 7/105 (6%)
 Frame = +2

Query: 2   RKHVEGQSGHAAKTTPVVASSQPASALP------GGPCSG-TLKVAQQQSKSLQSNIKDP 160
           RKHVEGQ GHAAK    VA++  A+A P      G P +G T+   Q  +KS  +   DP
Sbjct: 9   RKHVEGQPGHAAKAMSAVAAAAAAAAQPAALAGAGAPAAGLTVNQHQLPAKSYATGATDP 68

Query: 161 HAVQYNGMPSSNEEQNSYAQNSKSLPGPSLICQSPHSNFYPISKQ 295
            ++QYN    + + ++   Q+S +L   + +      + +P SKQ
Sbjct: 69  CSLQYNRELVNKQNESENMQDSDNLSMLTSMNTGNTGSVFPFSKQ 113


>gb|ACN29235.1| unknown [Zea mays]
          Length = 453

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 36/105 (34%), Positives = 55/105 (52%), Gaps = 7/105 (6%)
 Frame = +2

Query: 2   RKHVEGQSGHAAKTTPVVASSQPASALP------GGPCSG-TLKVAQQQSKSLQSNIKDP 160
           RKHVEGQ GHAAK    VA++  A+A P      G P +G T+   Q  +KS  +   DP
Sbjct: 112 RKHVEGQPGHAAKAMSAVAAAAAAAAQPAALAGAGAPAAGLTVNQHQLPAKSYATGATDP 171

Query: 161 HAVQYNGMPSSNEEQNSYAQNSKSLPGPSLICQSPHSNFYPISKQ 295
            ++QYN    + + ++   Q+S +L   + +      + +P SKQ
Sbjct: 172 CSLQYNRELVNKQNESENMQDSDNLSMLTSMNTGNTGSVFPFSKQ 216


>gb|ACN28456.1| unknown [Zea mays]
          Length = 494

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 36/105 (34%), Positives = 55/105 (52%), Gaps = 7/105 (6%)
 Frame = +2

Query: 2   RKHVEGQSGHAAKTTPVVASSQPASALP------GGPCSG-TLKVAQQQSKSLQSNIKDP 160
           RKHVEGQ GHAAK    VA++  A+A P      G P +G T+   Q  +KS  +   DP
Sbjct: 153 RKHVEGQPGHAAKAMSAVAAAAAAAAQPAALAGAGAPAAGLTVNQHQLPAKSYATGATDP 212

Query: 161 HAVQYNGMPSSNEEQNSYAQNSKSLPGPSLICQSPHSNFYPISKQ 295
            ++QYN    + + ++   Q+S +L   + +      + +P SKQ
Sbjct: 213 CSLQYNRELVNKQNESENMQDSDNLSMLTSMNTGNTGSVFPFSKQ 257


>ref|NP_001152097.1| LOC100285734 [Zea mays] gi|195652595|gb|ACG45765.1|
           growth-regulating factor 1 [Zea mays]
           gi|224029813|gb|ACN33982.1| unknown [Zea mays]
           gi|414872594|tpg|DAA51151.1| TPA: growth-regulating
           factor 1 [Zea mays]
          Length = 593

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 36/105 (34%), Positives = 55/105 (52%), Gaps = 7/105 (6%)
 Frame = +2

Query: 2   RKHVEGQSGHAAKTTPVVASSQPASALP------GGPCSG-TLKVAQQQSKSLQSNIKDP 160
           RKHVEGQ GHAAK    VA++  A+A P      G P +G T+   Q  +KS  +   DP
Sbjct: 252 RKHVEGQPGHAAKAMSAVAAAAAAAAQPAALAGAGAPAAGLTVNQHQLPAKSYATGATDP 311

Query: 161 HAVQYNGMPSSNEEQNSYAQNSKSLPGPSLICQSPHSNFYPISKQ 295
            ++QYN    + + ++   Q+S +L   + +      + +P SKQ
Sbjct: 312 CSLQYNRELVNKQNESENMQDSDNLSMLTSMNTGNTGSVFPFSKQ 356


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