BLASTX nr result
ID: Zingiber24_contig00032195
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00032195
(342 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_199615.1| plant organelle RNA recognition domain-containi... 67 2e-09
gb|AAU44577.1| hypothetical protein AT5G48040 [Arabidopsis thali... 67 2e-09
ref|XP_006843882.1| hypothetical protein AMTR_s00007p00266080 [A... 66 5e-09
ref|XP_002863847.1| hypothetical protein ARALYDRAFT_917650 [Arab... 66 5e-09
emb|CBI39469.3| unnamed protein product [Vitis vinifera] 64 2e-08
ref|XP_002267271.1| PREDICTED: uncharacterized protein LOC100263... 64 2e-08
ref|XP_006361373.1| PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE... 64 3e-08
ref|XP_006280492.1| hypothetical protein CARUB_v10026432mg, part... 62 8e-08
ref|XP_004250604.1| PREDICTED: uncharacterized protein LOC101246... 62 8e-08
ref|XP_002532674.1| conserved hypothetical protein [Ricinus comm... 62 1e-07
ref|XP_006395222.1| hypothetical protein EUTSA_v10005600mg [Eutr... 61 2e-07
ref|XP_006844748.1| hypothetical protein AMTR_s00016p00255910 [A... 61 2e-07
gb|EXB56455.1| hypothetical protein L484_009881 [Morus notabilis] 59 5e-07
ref|XP_004160225.1| PREDICTED: uncharacterized protein LOC101230... 59 7e-07
ref|XP_004138535.1| PREDICTED: uncharacterized protein LOC101209... 59 7e-07
ref|XP_004296716.1| PREDICTED: uncharacterized protein LOC101291... 58 1e-06
ref|XP_004296715.1| PREDICTED: uncharacterized protein LOC101291... 58 1e-06
ref|XP_006478869.1| PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE... 57 3e-06
ref|XP_006478866.1| PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE... 57 3e-06
ref|XP_006443124.1| hypothetical protein CICLE_v10024036mg [Citr... 57 3e-06
>ref|NP_199615.1| plant organelle RNA recognition domain-containing protein
[Arabidopsis thaliana] gi|10177755|dbj|BAB11068.1|
unnamed protein product [Arabidopsis thaliana]
gi|55740679|gb|AAV63932.1| hypothetical protein
At5g48040 [Arabidopsis thaliana]
gi|332008230|gb|AED95613.1| plant organelle RNA
recognition domain-containing protein [Arabidopsis
thaliana]
Length = 422
Score = 67.0 bits (162), Expect = 2e-09
Identities = 41/87 (47%), Positives = 46/87 (52%)
Frame = +3
Query: 60 RLPFLADQRATLVNVKLKWVKDRPLDSVVASEXXXXXXXXXXXXXSYHPRGRVPSFNLLK 239
R F QR LVNVKLKWVKDR LD+VV E S P R+P F LL
Sbjct: 21 RFDFFYQQRCGLVNVKLKWVKDRELDAVVVREKHLRAVCNLVSVISASPDLRLPIFKLLP 80
Query: 240 RCRQFGLPHRHGDIVAFMRRYPTIFRE 320
Q GLP + + AF+RRYP IF E
Sbjct: 81 HRGQLGLP-QELKLSAFIRRYPNIFVE 106
>gb|AAU44577.1| hypothetical protein AT5G48040 [Arabidopsis thaliana]
Length = 422
Score = 67.0 bits (162), Expect = 2e-09
Identities = 41/87 (47%), Positives = 46/87 (52%)
Frame = +3
Query: 60 RLPFLADQRATLVNVKLKWVKDRPLDSVVASEXXXXXXXXXXXXXSYHPRGRVPSFNLLK 239
R F QR LVNVKLKWVKDR LD+VV E S P R+P F LL
Sbjct: 21 RFDFFYQQRCGLVNVKLKWVKDRELDAVVVREKHLRAVCNLVSVISASPDLRLPIFKLLP 80
Query: 240 RCRQFGLPHRHGDIVAFMRRYPTIFRE 320
Q GLP + + AF+RRYP IF E
Sbjct: 81 HRGQLGLP-QELKLSAFIRRYPNIFVE 106
>ref|XP_006843882.1| hypothetical protein AMTR_s00007p00266080 [Amborella trichopoda]
gi|548846250|gb|ERN05557.1| hypothetical protein
AMTR_s00007p00266080 [Amborella trichopoda]
Length = 400
Score = 65.9 bits (159), Expect = 5e-09
Identities = 38/80 (47%), Positives = 45/80 (56%)
Frame = +3
Query: 81 QRATLVNVKLKWVKDRPLDSVVASEXXXXXXXXXXXXXSYHPRGRVPSFNLLKRCRQFGL 260
QR +LVN+KLKWVKD LD+VVA E H G +P + L KR RQ G+
Sbjct: 24 QRFSLVNIKLKWVKDPVLDTVVAMEKDLKAVCELKDMICRHADGCLPIYQLSKRRRQMGI 83
Query: 261 PHRHGDIVAFMRRYPTIFRE 320
R + FMRRYPTIF E
Sbjct: 84 EIR---VSRFMRRYPTIFHE 100
>ref|XP_002863847.1| hypothetical protein ARALYDRAFT_917650 [Arabidopsis lyrata subsp.
lyrata] gi|297309682|gb|EFH40106.1| hypothetical protein
ARALYDRAFT_917650 [Arabidopsis lyrata subsp. lyrata]
Length = 417
Score = 65.9 bits (159), Expect = 5e-09
Identities = 40/87 (45%), Positives = 47/87 (54%)
Frame = +3
Query: 60 RLPFLADQRATLVNVKLKWVKDRPLDSVVASEXXXXXXXXXXXXXSYHPRGRVPSFNLLK 239
R FL QR LVNVKLKWVKD+ LD+VV E S P ++P F LL
Sbjct: 21 RFDFLYQQRCGLVNVKLKWVKDKELDAVVVREKHLKAVCNLVSVISASPDLKLPIFKLLP 80
Query: 240 RCRQFGLPHRHGDIVAFMRRYPTIFRE 320
Q GLP + + AF+RRYP IF E
Sbjct: 81 HRGQLGLP-QDLKLSAFIRRYPNIFVE 106
>emb|CBI39469.3| unnamed protein product [Vitis vinifera]
Length = 377
Score = 63.9 bits (154), Expect = 2e-08
Identities = 36/84 (42%), Positives = 45/84 (53%)
Frame = +3
Query: 69 FLADQRATLVNVKLKWVKDRPLDSVVASEXXXXXXXXXXXXXSYHPRGRVPSFNLLKRCR 248
F+ Q+ +LVNVKLKWVKDR LD+VVA E S P P + L +
Sbjct: 23 FIYQQKFSLVNVKLKWVKDRALDAVVAGERNLRATCTLVSIISSDPHDGFPIYRLSRHRG 82
Query: 249 QFGLPHRHGDIVAFMRRYPTIFRE 320
Q GLPH + F+RR+P IF E
Sbjct: 83 QLGLPH-DIKLATFIRRFPNIFDE 105
>ref|XP_002267271.1| PREDICTED: uncharacterized protein LOC100263505 [Vitis vinifera]
Length = 428
Score = 63.9 bits (154), Expect = 2e-08
Identities = 36/84 (42%), Positives = 45/84 (53%)
Frame = +3
Query: 69 FLADQRATLVNVKLKWVKDRPLDSVVASEXXXXXXXXXXXXXSYHPRGRVPSFNLLKRCR 248
F+ Q+ +LVNVKLKWVKDR LD+VVA E S P P + L +
Sbjct: 23 FIYQQKFSLVNVKLKWVKDRALDAVVAGERNLRATCTLVSIISSDPHDGFPIYRLSRHRG 82
Query: 249 QFGLPHRHGDIVAFMRRYPTIFRE 320
Q GLPH + F+RR+P IF E
Sbjct: 83 QLGLPH-DIKLATFIRRFPNIFDE 105
>ref|XP_006361373.1| PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1-like isoform X1
[Solanum tuberosum] gi|565391327|ref|XP_006361374.1|
PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1-like
isoform X2 [Solanum tuberosum]
Length = 414
Score = 63.5 bits (153), Expect = 3e-08
Identities = 35/80 (43%), Positives = 45/80 (56%)
Frame = +3
Query: 81 QRATLVNVKLKWVKDRPLDSVVASEXXXXXXXXXXXXXSYHPRGRVPSFNLLKRCRQFGL 260
Q+ TLVNVKLKWVKD LDSVVA + +P ++L ++ RQ GL
Sbjct: 19 QKRTLVNVKLKWVKDSVLDSVVAKGTQLKAGTTLVSIIASQSTSGIPIYHLQRKHRQLGL 78
Query: 261 PHRHGDIVAFMRRYPTIFRE 320
PH + F+RRYP IF+E
Sbjct: 79 PH-DLKVSTFLRRYPNIFQE 97
>ref|XP_006280492.1| hypothetical protein CARUB_v10026432mg, partial [Capsella rubella]
gi|482549196|gb|EOA13390.1| hypothetical protein
CARUB_v10026432mg, partial [Capsella rubella]
Length = 434
Score = 62.0 bits (149), Expect = 8e-08
Identities = 37/80 (46%), Positives = 43/80 (53%)
Frame = +3
Query: 81 QRATLVNVKLKWVKDRPLDSVVASEXXXXXXXXXXXXXSYHPRGRVPSFNLLKRCRQFGL 260
QR LVNVKLKWVKD+ LD+VV E P R+P F LL Q GL
Sbjct: 40 QRCGLVNVKLKWVKDKELDAVVIREKHLKAVCNLVSVILSSPDSRLPIFKLLPHRGQLGL 99
Query: 261 PHRHGDIVAFMRRYPTIFRE 320
P + + AF+RRYP IF E
Sbjct: 100 P-QDVKVSAFVRRYPNIFVE 118
>ref|XP_004250604.1| PREDICTED: uncharacterized protein LOC101246785 [Solanum
lycopersicum]
Length = 764
Score = 62.0 bits (149), Expect = 8e-08
Identities = 34/80 (42%), Positives = 44/80 (55%)
Frame = +3
Query: 81 QRATLVNVKLKWVKDRPLDSVVASEXXXXXXXXXXXXXSYHPRGRVPSFNLLKRCRQFGL 260
Q+ TLVNVKLKWVKD LDSVV + +P ++L ++ RQ GL
Sbjct: 209 QKRTLVNVKLKWVKDSVLDSVVVGGTQLKAGTTLVSIIASQSTSGIPIYHLQRKHRQLGL 268
Query: 261 PHRHGDIVAFMRRYPTIFRE 320
PH + F+RRYP IF+E
Sbjct: 269 PH-DLKVSTFLRRYPNIFQE 287
>ref|XP_002532674.1| conserved hypothetical protein [Ricinus communis]
gi|223527587|gb|EEF29702.1| conserved hypothetical
protein [Ricinus communis]
Length = 404
Score = 61.6 bits (148), Expect = 1e-07
Identities = 38/88 (43%), Positives = 48/88 (54%)
Frame = +3
Query: 60 RLPFLADQRATLVNVKLKWVKDRPLDSVVASEXXXXXXXXXXXXXSYHPRGRVPSFNLLK 239
R F Q +LVNVKLKWVKDR LD++VA + S P +P ++L
Sbjct: 20 RRGFNYQQTFSLVNVKLKWVKDRALDTLVAGQTDLKATCLLTSIISSAPLCCLPIYHLTP 79
Query: 240 RCRQFGLPHRHGDIVAFMRRYPTIFRES 323
RQ LPH + F+RRYPTIF+ES
Sbjct: 80 HRRQLCLPH-DLKLSTFIRRYPTIFQES 106
>ref|XP_006395222.1| hypothetical protein EUTSA_v10005600mg [Eutrema salsugineum]
gi|557091861|gb|ESQ32508.1| hypothetical protein
EUTSA_v10005600mg [Eutrema salsugineum]
Length = 405
Score = 60.8 bits (146), Expect = 2e-07
Identities = 36/80 (45%), Positives = 44/80 (55%)
Frame = +3
Query: 81 QRATLVNVKLKWVKDRPLDSVVASEXXXXXXXXXXXXXSYHPRGRVPSFNLLKRCRQFGL 260
Q+ LVNVKLKWVKD+ LD+VV E S P R+P F+L Q GL
Sbjct: 26 QKCGLVNVKLKWVKDKELDAVVVREKHLRAVCNLVSVISSAPDSRLPIFHLNTHRGQLGL 85
Query: 261 PHRHGDIVAFMRRYPTIFRE 320
P + + AF+RRYP IF E
Sbjct: 86 P-QDLKLAAFIRRYPNIFVE 104
>ref|XP_006844748.1| hypothetical protein AMTR_s00016p00255910 [Amborella trichopoda]
gi|548847219|gb|ERN06423.1| hypothetical protein
AMTR_s00016p00255910 [Amborella trichopoda]
Length = 396
Score = 60.8 bits (146), Expect = 2e-07
Identities = 37/85 (43%), Positives = 44/85 (51%)
Frame = +3
Query: 66 PFLADQRATLVNVKLKWVKDRPLDSVVASEXXXXXXXXXXXXXSYHPRGRVPSFNLLKRC 245
P QR +LVN+KLKWVKD LD+VVA E G +P + L KR
Sbjct: 15 PCYYQQRFSLVNIKLKWVKDPVLDTVVAMEKDLKAVCELKDMICRQADGCLPVYQLSKRR 74
Query: 246 RQFGLPHRHGDIVAFMRRYPTIFRE 320
RQ + R + FMRRYPTIF E
Sbjct: 75 RQMDIEIR---VSRFMRRYPTIFHE 96
>gb|EXB56455.1| hypothetical protein L484_009881 [Morus notabilis]
Length = 428
Score = 59.3 bits (142), Expect = 5e-07
Identities = 34/85 (40%), Positives = 47/85 (55%)
Frame = +3
Query: 69 FLADQRATLVNVKLKWVKDRPLDSVVASEXXXXXXXXXXXXXSYHPRGRVPSFNLLKRCR 248
F Q+ +LVNVKLKWVKD+ LD+ V E S P+ R+P ++L
Sbjct: 23 FSYQQKCSLVNVKLKWVKDKALDAAVIVEKDLKAACTLATIISSTPQRRLPIYHLSCHRG 82
Query: 249 QFGLPHRHGDIVAFMRRYPTIFRES 323
Q GLP + + F+RRYP++F ES
Sbjct: 83 QLGLP-KDLKLSTFIRRYPSVFLES 106
>ref|XP_004160225.1| PREDICTED: uncharacterized protein LOC101230715 [Cucumis sativus]
Length = 423
Score = 58.9 bits (141), Expect = 7e-07
Identities = 31/77 (40%), Positives = 46/77 (59%)
Frame = +3
Query: 93 LVNVKLKWVKDRPLDSVVASEXXXXXXXXXXXXXSYHPRGRVPSFNLLKRCRQFGLPHRH 272
LVN++LKWVKD+ LD+VV++E S P +P ++L + RQ G+P+
Sbjct: 32 LVNIRLKWVKDKDLDTVVSAEKDLKAVCFLVSIISSSPEHCLPVYHLRRHRRQLGIPN-D 90
Query: 273 GDIVAFMRRYPTIFRES 323
+ F+RRYP+IF ES
Sbjct: 91 VKMSTFIRRYPSIFHES 107
>ref|XP_004138535.1| PREDICTED: uncharacterized protein LOC101209849 [Cucumis sativus]
Length = 423
Score = 58.9 bits (141), Expect = 7e-07
Identities = 31/77 (40%), Positives = 46/77 (59%)
Frame = +3
Query: 93 LVNVKLKWVKDRPLDSVVASEXXXXXXXXXXXXXSYHPRGRVPSFNLLKRCRQFGLPHRH 272
LVN++LKWVKD+ LD+VV++E S P +P ++L + RQ G+P+
Sbjct: 32 LVNIRLKWVKDKDLDTVVSAEKDLKAVCFLVSIISSSPEHCLPVYHLRRHRRQLGIPN-D 90
Query: 273 GDIVAFMRRYPTIFRES 323
+ F+RRYP+IF ES
Sbjct: 91 VKMSTFIRRYPSIFHES 107
>ref|XP_004296716.1| PREDICTED: uncharacterized protein LOC101291913 isoform 2 [Fragaria
vesca subsp. vesca]
Length = 393
Score = 57.8 bits (138), Expect = 1e-06
Identities = 33/81 (40%), Positives = 44/81 (54%)
Frame = +3
Query: 81 QRATLVNVKLKWVKDRPLDSVVASEXXXXXXXXXXXXXSYHPRGRVPSFNLLKRCRQFGL 260
Q+ LVNVKLKWVKDR LD+VV +E S G +P ++L Q L
Sbjct: 25 QKRNLVNVKLKWVKDRALDAVVTAERDLKAACVLVSIISSSSHGCLPIYHLSCHRGQLNL 84
Query: 261 PHRHGDIVAFMRRYPTIFRES 323
P+ + F+RRYP++F ES
Sbjct: 85 PYEL-KVSTFIRRYPSVFLES 104
>ref|XP_004296715.1| PREDICTED: uncharacterized protein LOC101291913 isoform 1 [Fragaria
vesca subsp. vesca]
Length = 425
Score = 57.8 bits (138), Expect = 1e-06
Identities = 33/81 (40%), Positives = 44/81 (54%)
Frame = +3
Query: 81 QRATLVNVKLKWVKDRPLDSVVASEXXXXXXXXXXXXXSYHPRGRVPSFNLLKRCRQFGL 260
Q+ LVNVKLKWVKDR LD+VV +E S G +P ++L Q L
Sbjct: 25 QKRNLVNVKLKWVKDRALDAVVTAERDLKAACVLVSIISSSSHGCLPIYHLSCHRGQLNL 84
Query: 261 PHRHGDIVAFMRRYPTIFRES 323
P+ + F+RRYP++F ES
Sbjct: 85 PYEL-KVSTFIRRYPSVFLES 104
>ref|XP_006478869.1| PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1-like isoform X4
[Citrus sinensis]
Length = 417
Score = 56.6 bits (135), Expect = 3e-06
Identities = 36/88 (40%), Positives = 46/88 (52%)
Frame = +3
Query: 60 RLPFLADQRATLVNVKLKWVKDRPLDSVVASEXXXXXXXXXXXXXSYHPRGRVPSFNLLK 239
R F Q+ LVNVKLKW KD+ LD+VVA+E S VP ++L +
Sbjct: 20 RKGFSYQQKFGLVNVKLKWAKDKSLDAVVAAEKDLRAACFLVSIISSASHCFVPIYHLCR 79
Query: 240 RCRQFGLPHRHGDIVAFMRRYPTIFRES 323
Q GLP + + F+RRYP IF ES
Sbjct: 80 HRGQLGLP-QDLKLSTFIRRYPNIFCES 106
>ref|XP_006478866.1| PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1-like isoform X1
[Citrus sinensis] gi|568850329|ref|XP_006478867.1|
PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1-like
isoform X2 [Citrus sinensis]
gi|568850331|ref|XP_006478868.1| PREDICTED: protein ROOT
PRIMORDIUM DEFECTIVE 1-like isoform X3 [Citrus sinensis]
Length = 425
Score = 56.6 bits (135), Expect = 3e-06
Identities = 36/88 (40%), Positives = 46/88 (52%)
Frame = +3
Query: 60 RLPFLADQRATLVNVKLKWVKDRPLDSVVASEXXXXXXXXXXXXXSYHPRGRVPSFNLLK 239
R F Q+ LVNVKLKW KD+ LD+VVA+E S VP ++L +
Sbjct: 20 RKGFSYQQKFGLVNVKLKWAKDKSLDAVVAAEKDLRAACFLVSIISSASHCFVPIYHLCR 79
Query: 240 RCRQFGLPHRHGDIVAFMRRYPTIFRES 323
Q GLP + + F+RRYP IF ES
Sbjct: 80 HRGQLGLP-QDLKLSTFIRRYPNIFCES 106
>ref|XP_006443124.1| hypothetical protein CICLE_v10024036mg [Citrus clementina]
gi|557545386|gb|ESR56364.1| hypothetical protein
CICLE_v10024036mg [Citrus clementina]
Length = 479
Score = 56.6 bits (135), Expect = 3e-06
Identities = 36/88 (40%), Positives = 46/88 (52%)
Frame = +3
Query: 60 RLPFLADQRATLVNVKLKWVKDRPLDSVVASEXXXXXXXXXXXXXSYHPRGRVPSFNLLK 239
R F Q+ LVNVKLKW KD+ LD+VVA+E S VP ++L +
Sbjct: 20 RKGFSYQQKFGLVNVKLKWAKDKSLDAVVAAEKDLRAACFLVSIISSASHCFVPIYHLCR 79
Query: 240 RCRQFGLPHRHGDIVAFMRRYPTIFRES 323
Q GLP + + F+RRYP IF ES
Sbjct: 80 HRGQLGLP-QDLKLSTFIRRYPNIFCES 106