BLASTX nr result
ID: Zingiber24_contig00032188
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00032188
(1368 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI27412.3| unnamed protein product [Vitis vinifera] 771 0.0
ref|XP_002267464.1| PREDICTED: DNA-directed RNA polymerase 1, mi... 771 0.0
ref|XP_002461035.1| hypothetical protein SORBIDRAFT_02g039520 [S... 757 0.0
ref|XP_006660444.1| PREDICTED: DNA-directed RNA polymerase 1B, m... 755 0.0
ref|XP_006660443.1| PREDICTED: DNA-directed RNA polymerase 1B, m... 755 0.0
dbj|BAD23376.1| putative phage-type RNA polymerase [Oryza sativa... 751 0.0
ref|NP_001062659.1| Os09g0246200 [Oryza sativa Japonica Group] g... 751 0.0
gb|EEE69251.1| hypothetical protein OsJ_28503 [Oryza sativa Japo... 751 0.0
ref|XP_004956403.1| PREDICTED: DNA-directed RNA polymerase 1B, m... 749 0.0
ref|XP_003577161.1| PREDICTED: DNA-directed RNA polymerase 2, ch... 748 0.0
ref|XP_002278535.1| PREDICTED: DNA-directed RNA polymerase 2, ch... 744 0.0
ref|XP_006348633.1| PREDICTED: DNA-directed RNA polymerase 1, mi... 743 0.0
gb|AAF32492.1|AF091838_1 single-subunit RNA polymerase G [Tritic... 743 0.0
gb|EOY01555.1| DNA-directed RNA polymerase isoform 3 [Theobroma ... 742 0.0
gb|EOY01553.1| DNA-directed RNA polymerase isoform 1 [Theobroma ... 742 0.0
tpg|DAA63638.1| TPA: RNA polymerase T phage-like 1 [Zea mays] 742 0.0
gb|EMJ26582.1| hypothetical protein PRUPE_ppa000780mg [Prunus pe... 741 0.0
sp|Q8L6J5.2|RPO1B_TOBAC RecName: Full=DNA-directed RNA polymeras... 741 0.0
emb|CAC95022.1| mitochondrial RNA polymerase [Nicotiana tabacum] 741 0.0
emb|CAC82574.2| phage-type RNA polymerase [Nicotiana tabacum] 740 0.0
>emb|CBI27412.3| unnamed protein product [Vitis vinifera]
Length = 810
Score = 771 bits (1992), Expect = 0.0
Identities = 366/465 (78%), Positives = 414/465 (89%), Gaps = 10/465 (2%)
Frame = +1
Query: 1 KEPKKLTRRYGVIECDPVILQRLDKTARHMVIPYVPMLVPPINWTGFDKGAHLYLRSYVM 180
KE +K TRRYGVIECDP++ + L+KTARHMVIPY+PMLVPP+NWTG+DKGA+L+L SYVM
Sbjct: 205 KETQKGTRRYGVIECDPLVRKGLEKTARHMVIPYMPMLVPPLNWTGYDKGAYLFLPSYVM 264
Query: 181 RTHGARQQKQAIKKAPRKTMQTVFEALNTLGNTKWRVNKSVLSVVERIWSSGGRLADLVD 360
R HGARQQ++AIK+APRK ++ FEALNTLGNTKWR+NK VL V++RIW+SGGRLADLVD
Sbjct: 265 RIHGARQQREAIKRAPRKALEPAFEALNTLGNTKWRINKRVLGVIDRIWASGGRLADLVD 324
Query: 361 REDIPLPEKPNTEDEAEIXXXXXXXXXXXXENNERHSRRCDVELKLAVARKMKDEEGFYY 540
RED+PLPE+P+TEDEAEI EN+ERHS+RCD+ELKLAVARKMKDE+GF+Y
Sbjct: 325 REDVPLPEEPDTEDEAEIRKWKWKVRSVKKENSERHSQRCDIELKLAVARKMKDEDGFFY 384
Query: 541 PHNLDFRGRAYPMHPYLNHLGSDLCRGVLEFAEGRPLGKSGLHWLKIHLANLYAGGVDKL 720
PHNLDFRGRAYPMHPYLNHLGSDLCRG+LEFAEGRPLGKSGL WLKIHLAN+YAGGVDKL
Sbjct: 385 PHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLANVYAGGVDKL 444
Query: 721 SYDGRLAFTENHLEDIIDSADRPLEGRRWWLGAEDPFQCLAVCINLAEAVRSSSPNATVS 900
SY+GR+AFTENHLEDI DSADRPLEGRRWWL AEDPFQCLA CINL+EA+RSSSP T+S
Sbjct: 445 SYEGRVAFTENHLEDIFDSADRPLEGRRWWLSAEDPFQCLATCINLSEALRSSSPETTIS 504
Query: 901 HIPVHQDGSCNGLQHYAALGRDKLGAIAVNLVSGDKPADVYSEIAARVRDIMQRDAEEDP 1080
H+PVHQDGSCNGLQHYAALGRDKLGA AVNLV+G+KPADVYS IAARV DIMQRDA++DP
Sbjct: 505 HMPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLDIMQRDAQKDP 564
Query: 1081 AENPNALRARLLVNQVDRKLVKQTVMT----------XDQIKKRLKERNLVADDAEIFSA 1230
A PNALRARLL++QVDRKLVKQTVMT DQIK+RLKER +AD+ E+FSA
Sbjct: 565 ATEPNALRARLLISQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERCAIADEGEVFSA 624
Query: 1231 SCYAAKTTLTALGQMFESARKIMSWLGDCAKTIASQNHPVRWTTP 1365
SCYAAKTTLTALG+MFE+AR IMSWLGDCAK IAS+NHPVRW TP
Sbjct: 625 SCYAAKTTLTALGEMFEAARSIMSWLGDCAKVIASENHPVRWNTP 669
>ref|XP_002267464.1| PREDICTED: DNA-directed RNA polymerase 1, mitochondrial [Vitis
vinifera]
Length = 978
Score = 771 bits (1992), Expect = 0.0
Identities = 366/465 (78%), Positives = 414/465 (89%), Gaps = 10/465 (2%)
Frame = +1
Query: 1 KEPKKLTRRYGVIECDPVILQRLDKTARHMVIPYVPMLVPPINWTGFDKGAHLYLRSYVM 180
KE +K TRRYGVIECDP++ + L+KTARHMVIPY+PMLVPP+NWTG+DKGA+L+L SYVM
Sbjct: 373 KETQKGTRRYGVIECDPLVRKGLEKTARHMVIPYMPMLVPPLNWTGYDKGAYLFLPSYVM 432
Query: 181 RTHGARQQKQAIKKAPRKTMQTVFEALNTLGNTKWRVNKSVLSVVERIWSSGGRLADLVD 360
R HGARQQ++AIK+APRK ++ FEALNTLGNTKWR+NK VL V++RIW+SGGRLADLVD
Sbjct: 433 RIHGARQQREAIKRAPRKALEPAFEALNTLGNTKWRINKRVLGVIDRIWASGGRLADLVD 492
Query: 361 REDIPLPEKPNTEDEAEIXXXXXXXXXXXXENNERHSRRCDVELKLAVARKMKDEEGFYY 540
RED+PLPE+P+TEDEAEI EN+ERHS+RCD+ELKLAVARKMKDE+GF+Y
Sbjct: 493 REDVPLPEEPDTEDEAEIRKWKWKVRSVKKENSERHSQRCDIELKLAVARKMKDEDGFFY 552
Query: 541 PHNLDFRGRAYPMHPYLNHLGSDLCRGVLEFAEGRPLGKSGLHWLKIHLANLYAGGVDKL 720
PHNLDFRGRAYPMHPYLNHLGSDLCRG+LEFAEGRPLGKSGL WLKIHLAN+YAGGVDKL
Sbjct: 553 PHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLANVYAGGVDKL 612
Query: 721 SYDGRLAFTENHLEDIIDSADRPLEGRRWWLGAEDPFQCLAVCINLAEAVRSSSPNATVS 900
SY+GR+AFTENHLEDI DSADRPLEGRRWWL AEDPFQCLA CINL+EA+RSSSP T+S
Sbjct: 613 SYEGRVAFTENHLEDIFDSADRPLEGRRWWLSAEDPFQCLATCINLSEALRSSSPETTIS 672
Query: 901 HIPVHQDGSCNGLQHYAALGRDKLGAIAVNLVSGDKPADVYSEIAARVRDIMQRDAEEDP 1080
H+PVHQDGSCNGLQHYAALGRDKLGA AVNLV+G+KPADVYS IAARV DIMQRDA++DP
Sbjct: 673 HMPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLDIMQRDAQKDP 732
Query: 1081 AENPNALRARLLVNQVDRKLVKQTVMT----------XDQIKKRLKERNLVADDAEIFSA 1230
A PNALRARLL++QVDRKLVKQTVMT DQIK+RLKER +AD+ E+FSA
Sbjct: 733 ATEPNALRARLLISQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERCAIADEGEVFSA 792
Query: 1231 SCYAAKTTLTALGQMFESARKIMSWLGDCAKTIASQNHPVRWTTP 1365
SCYAAKTTLTALG+MFE+AR IMSWLGDCAK IAS+NHPVRW TP
Sbjct: 793 SCYAAKTTLTALGEMFEAARSIMSWLGDCAKVIASENHPVRWNTP 837
>ref|XP_002461035.1| hypothetical protein SORBIDRAFT_02g039520 [Sorghum bicolor]
gi|241924412|gb|EER97556.1| hypothetical protein
SORBIDRAFT_02g039520 [Sorghum bicolor]
Length = 976
Score = 757 bits (1955), Expect = 0.0
Identities = 359/465 (77%), Positives = 412/465 (88%), Gaps = 10/465 (2%)
Frame = +1
Query: 1 KEPKKLTRRYGVIECDPVILQRLDKTARHMVIPYVPMLVPPINWTGFDKGAHLYLRSYVM 180
KE +K +RRYGVI+CDP++ Q LD+TA+HMVIPY+PML+PPI WTG+DKGAHL+L SYVM
Sbjct: 371 KEQQKSSRRYGVIKCDPLVRQGLDRTAKHMVIPYMPMLIPPICWTGYDKGAHLFLPSYVM 430
Query: 181 RTHGARQQKQAIKKAPRKTMQTVFEALNTLGNTKWRVNKSVLSVVERIWSSGGRLADLVD 360
RTHGARQQ++A+K+APR+ MQ+VFEALNTLG+TKWRVNK VLS+V+RIWSSGGRLADLVD
Sbjct: 431 RTHGARQQREAVKRAPREQMQSVFEALNTLGSTKWRVNKRVLSIVDRIWSSGGRLADLVD 490
Query: 361 REDIPLPEKPNTEDEAEIXXXXXXXXXXXXENNERHSRRCDVELKLAVARKMKDEEGFYY 540
R D+PLPEKP+TEDE I EN+ERHS+RCDVELKLAVARKMKDEEGFYY
Sbjct: 491 RTDVPLPEKPDTEDETLIKNWKWHLRSVKKENSERHSQRCDVELKLAVARKMKDEEGFYY 550
Query: 541 PHNLDFRGRAYPMHPYLNHLGSDLCRGVLEFAEGRPLGKSGLHWLKIHLANLYAGGVDKL 720
PHNLDFRGRAYPMHPYLNHLGSDLCRG+LEFAEGRPLGKSGLHWLKIHLANLYAGGVDKL
Sbjct: 551 PHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLHWLKIHLANLYAGGVDKL 610
Query: 721 SYDGRLAFTENHLEDIIDSADRPLEGRRWWLGAEDPFQCLAVCINLAEAVRSSSPNATVS 900
SYDGR+AFTENHLE+I DSADRPLEG+RWWLGAEDPFQCLAVC+NL EA+RSSSP T+S
Sbjct: 611 SYDGRVAFTENHLEEIFDSADRPLEGKRWWLGAEDPFQCLAVCMNLTEALRSSSPETTIS 670
Query: 901 HIPVHQDGSCNGLQHYAALGRDKLGAIAVNLVSGDKPADVYSEIAARVRDIMQRDAEEDP 1080
HIPVHQDGSCNGLQHYAALGRDKLGAIAVNLV+G+KPADVY+ IA RV +IM+ DA++DP
Sbjct: 671 HIPVHQDGSCNGLQHYAALGRDKLGAIAVNLVAGEKPADVYTGIATRVLEIMRMDAQKDP 730
Query: 1081 AENPNALRARLLVNQVDRKLVKQTVMT----------XDQIKKRLKERNLVADDAEIFSA 1230
+ +P+ RARL+V+QVDRKLVKQTVMT DQIK+RLKER ++ D+AE+F A
Sbjct: 731 SIDPDVARARLIVDQVDRKLVKQTVMTSVYGVTYVGARDQIKRRLKERGVIPDEAELFGA 790
Query: 1231 SCYAAKTTLTALGQMFESARKIMSWLGDCAKTIASQNHPVRWTTP 1365
SCYAAK TLTALG+MF++AR IM+WLGDCAK IA +N PVRWTTP
Sbjct: 791 SCYAAKVTLTALGEMFQAARGIMNWLGDCAKVIACENEPVRWTTP 835
>ref|XP_006660444.1| PREDICTED: DNA-directed RNA polymerase 1B, mitochondrial-like isoform
X2 [Oryza brachyantha]
Length = 839
Score = 755 bits (1950), Expect = 0.0
Identities = 358/465 (76%), Positives = 413/465 (88%), Gaps = 10/465 (2%)
Frame = +1
Query: 1 KEPKKLTRRYGVIECDPVILQRLDKTARHMVIPYVPMLVPPINWTGFDKGAHLYLRSYVM 180
KE +K +RRYGVI+CDP++ Q LD+TA+HMVIPY+PML+PPI+WTG+DKGAHL+L SYVM
Sbjct: 234 KEQQKSSRRYGVIKCDPLVRQGLDRTAKHMVIPYMPMLIPPISWTGYDKGAHLFLPSYVM 293
Query: 181 RTHGARQQKQAIKKAPRKTMQTVFEALNTLGNTKWRVNKSVLSVVERIWSSGGRLADLVD 360
RTHGARQQ++A+K+APR+ MQ+VFEAL+TLG+TKWRVNK VLS+V+RIWSSGGRLADLVD
Sbjct: 294 RTHGARQQREAVKRAPREQMQSVFEALDTLGSTKWRVNKRVLSIVDRIWSSGGRLADLVD 353
Query: 361 REDIPLPEKPNTEDEAEIXXXXXXXXXXXXENNERHSRRCDVELKLAVARKMKDEEGFYY 540
R D+ LPEKP+TEDEA++ EN+ERHS+RCDVELKLAVARKMKDEEGFYY
Sbjct: 354 RSDVALPEKPDTEDEAKLKKWRWNLKAAKKENSERHSQRCDVELKLAVARKMKDEEGFYY 413
Query: 541 PHNLDFRGRAYPMHPYLNHLGSDLCRGVLEFAEGRPLGKSGLHWLKIHLANLYAGGVDKL 720
PHNLDFRGRAYPMHPYLNHLGSDLCRGVLEFAEGRPLGKSGL WLKIHLANLYAGGVDKL
Sbjct: 414 PHNLDFRGRAYPMHPYLNHLGSDLCRGVLEFAEGRPLGKSGLRWLKIHLANLYAGGVDKL 473
Query: 721 SYDGRLAFTENHLEDIIDSADRPLEGRRWWLGAEDPFQCLAVCINLAEAVRSSSPNATVS 900
SYDGR+AFTENHLEDI DSADRPLEG+RWWLGAEDPFQCLAVCINL EA+RS SP +S
Sbjct: 474 SYDGRIAFTENHLEDIFDSADRPLEGKRWWLGAEDPFQCLAVCINLTEALRSPSPETMIS 533
Query: 901 HIPVHQDGSCNGLQHYAALGRDKLGAIAVNLVSGDKPADVYSEIAARVRDIMQRDAEEDP 1080
HIPVHQDGSCNGLQHYAALGRDKLGAIAVNLV+G+KPADVY+ IA RV +IM+ DA +DP
Sbjct: 534 HIPVHQDGSCNGLQHYAALGRDKLGAIAVNLVAGEKPADVYTGIATRVLEIMRNDALKDP 593
Query: 1081 AENPNALRARLLVNQVDRKLVKQTVMT----------XDQIKKRLKERNLVADDAEIFSA 1230
A +P+A RAR+LV+QVDRKLVKQTVMT +QIK+RLKER+++ DD+E+FSA
Sbjct: 594 ATDPDAARARMLVDQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLKERDMIGDDSELFSA 653
Query: 1231 SCYAAKTTLTALGQMFESARKIMSWLGDCAKTIASQNHPVRWTTP 1365
SCYAAK TLTALG+MF++AR IM+WLGDCAK IA +N PV+WTTP
Sbjct: 654 SCYAAKVTLTALGEMFQAARSIMNWLGDCAKIIACENEPVKWTTP 698
>ref|XP_006660443.1| PREDICTED: DNA-directed RNA polymerase 1B, mitochondrial-like isoform
X1 [Oryza brachyantha]
Length = 703
Score = 755 bits (1950), Expect = 0.0
Identities = 358/465 (76%), Positives = 413/465 (88%), Gaps = 10/465 (2%)
Frame = +1
Query: 1 KEPKKLTRRYGVIECDPVILQRLDKTARHMVIPYVPMLVPPINWTGFDKGAHLYLRSYVM 180
KE +K +RRYGVI+CDP++ Q LD+TA+HMVIPY+PML+PPI+WTG+DKGAHL+L SYVM
Sbjct: 207 KEQQKSSRRYGVIKCDPLVRQGLDRTAKHMVIPYMPMLIPPISWTGYDKGAHLFLPSYVM 266
Query: 181 RTHGARQQKQAIKKAPRKTMQTVFEALNTLGNTKWRVNKSVLSVVERIWSSGGRLADLVD 360
RTHGARQQ++A+K+APR+ MQ+VFEAL+TLG+TKWRVNK VLS+V+RIWSSGGRLADLVD
Sbjct: 267 RTHGARQQREAVKRAPREQMQSVFEALDTLGSTKWRVNKRVLSIVDRIWSSGGRLADLVD 326
Query: 361 REDIPLPEKPNTEDEAEIXXXXXXXXXXXXENNERHSRRCDVELKLAVARKMKDEEGFYY 540
R D+ LPEKP+TEDEA++ EN+ERHS+RCDVELKLAVARKMKDEEGFYY
Sbjct: 327 RSDVALPEKPDTEDEAKLKKWRWNLKAAKKENSERHSQRCDVELKLAVARKMKDEEGFYY 386
Query: 541 PHNLDFRGRAYPMHPYLNHLGSDLCRGVLEFAEGRPLGKSGLHWLKIHLANLYAGGVDKL 720
PHNLDFRGRAYPMHPYLNHLGSDLCRGVLEFAEGRPLGKSGL WLKIHLANLYAGGVDKL
Sbjct: 387 PHNLDFRGRAYPMHPYLNHLGSDLCRGVLEFAEGRPLGKSGLRWLKIHLANLYAGGVDKL 446
Query: 721 SYDGRLAFTENHLEDIIDSADRPLEGRRWWLGAEDPFQCLAVCINLAEAVRSSSPNATVS 900
SYDGR+AFTENHLEDI DSADRPLEG+RWWLGAEDPFQCLAVCINL EA+RS SP +S
Sbjct: 447 SYDGRIAFTENHLEDIFDSADRPLEGKRWWLGAEDPFQCLAVCINLTEALRSPSPETMIS 506
Query: 901 HIPVHQDGSCNGLQHYAALGRDKLGAIAVNLVSGDKPADVYSEIAARVRDIMQRDAEEDP 1080
HIPVHQDGSCNGLQHYAALGRDKLGAIAVNLV+G+KPADVY+ IA RV +IM+ DA +DP
Sbjct: 507 HIPVHQDGSCNGLQHYAALGRDKLGAIAVNLVAGEKPADVYTGIATRVLEIMRNDALKDP 566
Query: 1081 AENPNALRARLLVNQVDRKLVKQTVMT----------XDQIKKRLKERNLVADDAEIFSA 1230
A +P+A RAR+LV+QVDRKLVKQTVMT +QIK+RLKER+++ DD+E+FSA
Sbjct: 567 ATDPDAARARMLVDQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLKERDMIGDDSELFSA 626
Query: 1231 SCYAAKTTLTALGQMFESARKIMSWLGDCAKTIASQNHPVRWTTP 1365
SCYAAK TLTALG+MF++AR IM+WLGDCAK IA +N PV+WTTP
Sbjct: 627 SCYAAKVTLTALGEMFQAARSIMNWLGDCAKIIACENEPVKWTTP 671
>dbj|BAD23376.1| putative phage-type RNA polymerase [Oryza sativa Japonica Group]
gi|48716846|dbj|BAD23544.1| putative phage-type RNA
polymerase [Oryza sativa Japonica Group]
gi|215694941|dbj|BAG90132.1| unnamed protein product
[Oryza sativa Japonica Group]
Length = 951
Score = 751 bits (1939), Expect = 0.0
Identities = 356/465 (76%), Positives = 411/465 (88%), Gaps = 10/465 (2%)
Frame = +1
Query: 1 KEPKKLTRRYGVIECDPVILQRLDKTARHMVIPYVPMLVPPINWTGFDKGAHLYLRSYVM 180
+E +K +RRYGVI+CDP++ Q LD+TA+HMVIPY+PML+PPI+WTG+DKGAHL+L SYVM
Sbjct: 412 REQQKSSRRYGVIKCDPLVRQGLDRTAKHMVIPYMPMLIPPISWTGYDKGAHLFLPSYVM 471
Query: 181 RTHGARQQKQAIKKAPRKTMQTVFEALNTLGNTKWRVNKSVLSVVERIWSSGGRLADLVD 360
RTHGARQQ+ A+++APR+ MQ+VFEALNTLG+TKWRVNK VLS+V+RIWSSGGRLADLVD
Sbjct: 472 RTHGARQQRDAVRRAPREQMQSVFEALNTLGSTKWRVNKRVLSIVDRIWSSGGRLADLVD 531
Query: 361 REDIPLPEKPNTEDEAEIXXXXXXXXXXXXENNERHSRRCDVELKLAVARKMKDEEGFYY 540
R D+ LPEKP+TEDE ++ EN+ERHS+RCDVELKLAVARKMKDE+GFYY
Sbjct: 532 RTDVALPEKPDTEDEDKLKKWRWTLRAAKKENSERHSQRCDVELKLAVARKMKDEDGFYY 591
Query: 541 PHNLDFRGRAYPMHPYLNHLGSDLCRGVLEFAEGRPLGKSGLHWLKIHLANLYAGGVDKL 720
PHNLDFRGRAYPMHPYLNHLGSDLCRGVLEFAEGRPLGKSGL WLKIHLANLYAGGVDKL
Sbjct: 592 PHNLDFRGRAYPMHPYLNHLGSDLCRGVLEFAEGRPLGKSGLRWLKIHLANLYAGGVDKL 651
Query: 721 SYDGRLAFTENHLEDIIDSADRPLEGRRWWLGAEDPFQCLAVCINLAEAVRSSSPNATVS 900
SYDGR+AFTENHLEDI DSADRPLEG+RWWLGAEDPFQCLAVCINL EA+RS SP +S
Sbjct: 652 SYDGRIAFTENHLEDIFDSADRPLEGKRWWLGAEDPFQCLAVCINLTEALRSPSPETMIS 711
Query: 901 HIPVHQDGSCNGLQHYAALGRDKLGAIAVNLVSGDKPADVYSEIAARVRDIMQRDAEEDP 1080
HIPVHQDGSCNGLQHYAALGRDKLGAIAVNLV+G+KPADVY+ IA RV +IM+ DA +DP
Sbjct: 712 HIPVHQDGSCNGLQHYAALGRDKLGAIAVNLVAGEKPADVYTGIATRVVEIMKNDALKDP 771
Query: 1081 AENPNALRARLLVNQVDRKLVKQTVMT----------XDQIKKRLKERNLVADDAEIFSA 1230
A +P+A RARLL++QVDRKLVKQTVMT +QIK+RLKER+++ DD+E+FSA
Sbjct: 772 ATDPDAARARLLLDQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLKERDMICDDSELFSA 831
Query: 1231 SCYAAKTTLTALGQMFESARKIMSWLGDCAKTIASQNHPVRWTTP 1365
SCYAAK TLTALG+MF++AR IM+WLGDCAK IA +N PVRWTTP
Sbjct: 832 SCYAAKVTLTALGEMFQAARSIMNWLGDCAKVIACENEPVRWTTP 876
>ref|NP_001062659.1| Os09g0246200 [Oryza sativa Japonica Group]
gi|30698494|dbj|BAC76604.1| RpoT1 [Oryza sativa Japonica
Group] gi|37360973|dbj|BAC98395.1| T7 bacteriophage-type
single subunit RNA polymerase [Oryza sativa Japonica
Group] gi|113630892|dbj|BAF24573.1| Os09g0246200 [Oryza
sativa Japonica Group]
Length = 1017
Score = 751 bits (1939), Expect = 0.0
Identities = 356/465 (76%), Positives = 411/465 (88%), Gaps = 10/465 (2%)
Frame = +1
Query: 1 KEPKKLTRRYGVIECDPVILQRLDKTARHMVIPYVPMLVPPINWTGFDKGAHLYLRSYVM 180
+E +K +RRYGVI+CDP++ Q LD+TA+HMVIPY+PML+PPI+WTG+DKGAHL+L SYVM
Sbjct: 412 REQQKSSRRYGVIKCDPLVRQGLDRTAKHMVIPYMPMLIPPISWTGYDKGAHLFLPSYVM 471
Query: 181 RTHGARQQKQAIKKAPRKTMQTVFEALNTLGNTKWRVNKSVLSVVERIWSSGGRLADLVD 360
RTHGARQQ+ A+++APR+ MQ+VFEALNTLG+TKWRVNK VLS+V+RIWSSGGRLADLVD
Sbjct: 472 RTHGARQQRDAVRRAPREQMQSVFEALNTLGSTKWRVNKRVLSIVDRIWSSGGRLADLVD 531
Query: 361 REDIPLPEKPNTEDEAEIXXXXXXXXXXXXENNERHSRRCDVELKLAVARKMKDEEGFYY 540
R D+ LPEKP+TEDE ++ EN+ERHS+RCDVELKLAVARKMKDE+GFYY
Sbjct: 532 RTDVALPEKPDTEDEDKLKKWRWTLRAAKKENSERHSQRCDVELKLAVARKMKDEDGFYY 591
Query: 541 PHNLDFRGRAYPMHPYLNHLGSDLCRGVLEFAEGRPLGKSGLHWLKIHLANLYAGGVDKL 720
PHNLDFRGRAYPMHPYLNHLGSDLCRGVLEFAEGRPLGKSGL WLKIHLANLYAGGVDKL
Sbjct: 592 PHNLDFRGRAYPMHPYLNHLGSDLCRGVLEFAEGRPLGKSGLRWLKIHLANLYAGGVDKL 651
Query: 721 SYDGRLAFTENHLEDIIDSADRPLEGRRWWLGAEDPFQCLAVCINLAEAVRSSSPNATVS 900
SYDGR+AFTENHLEDI DSADRPLEG+RWWLGAEDPFQCLAVCINL EA+RS SP +S
Sbjct: 652 SYDGRIAFTENHLEDIFDSADRPLEGKRWWLGAEDPFQCLAVCINLTEALRSPSPETMIS 711
Query: 901 HIPVHQDGSCNGLQHYAALGRDKLGAIAVNLVSGDKPADVYSEIAARVRDIMQRDAEEDP 1080
HIPVHQDGSCNGLQHYAALGRDKLGAIAVNLV+G+KPADVY+ IA RV +IM+ DA +DP
Sbjct: 712 HIPVHQDGSCNGLQHYAALGRDKLGAIAVNLVAGEKPADVYTGIATRVVEIMKNDALKDP 771
Query: 1081 AENPNALRARLLVNQVDRKLVKQTVMT----------XDQIKKRLKERNLVADDAEIFSA 1230
A +P+A RARLL++QVDRKLVKQTVMT +QIK+RLKER+++ DD+E+FSA
Sbjct: 772 ATDPDAARARLLLDQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLKERDMICDDSELFSA 831
Query: 1231 SCYAAKTTLTALGQMFESARKIMSWLGDCAKTIASQNHPVRWTTP 1365
SCYAAK TLTALG+MF++AR IM+WLGDCAK IA +N PVRWTTP
Sbjct: 832 SCYAAKVTLTALGEMFQAARSIMNWLGDCAKVIACENEPVRWTTP 876
>gb|EEE69251.1| hypothetical protein OsJ_28503 [Oryza sativa Japonica Group]
Length = 983
Score = 751 bits (1939), Expect = 0.0
Identities = 356/465 (76%), Positives = 411/465 (88%), Gaps = 10/465 (2%)
Frame = +1
Query: 1 KEPKKLTRRYGVIECDPVILQRLDKTARHMVIPYVPMLVPPINWTGFDKGAHLYLRSYVM 180
+E +K +RRYGVI+CDP++ Q LD+TA+HMVIPY+PML+PPI+WTG+DKGAHL+L SYVM
Sbjct: 378 REQQKSSRRYGVIKCDPLVRQGLDRTAKHMVIPYMPMLIPPISWTGYDKGAHLFLPSYVM 437
Query: 181 RTHGARQQKQAIKKAPRKTMQTVFEALNTLGNTKWRVNKSVLSVVERIWSSGGRLADLVD 360
RTHGARQQ+ A+++APR+ MQ+VFEALNTLG+TKWRVNK VLS+V+RIWSSGGRLADLVD
Sbjct: 438 RTHGARQQRDAVRRAPREQMQSVFEALNTLGSTKWRVNKRVLSIVDRIWSSGGRLADLVD 497
Query: 361 REDIPLPEKPNTEDEAEIXXXXXXXXXXXXENNERHSRRCDVELKLAVARKMKDEEGFYY 540
R D+ LPEKP+TEDE ++ EN+ERHS+RCDVELKLAVARKMKDE+GFYY
Sbjct: 498 RTDVALPEKPDTEDEDKLKKWRWTLRAAKKENSERHSQRCDVELKLAVARKMKDEDGFYY 557
Query: 541 PHNLDFRGRAYPMHPYLNHLGSDLCRGVLEFAEGRPLGKSGLHWLKIHLANLYAGGVDKL 720
PHNLDFRGRAYPMHPYLNHLGSDLCRGVLEFAEGRPLGKSGL WLKIHLANLYAGGVDKL
Sbjct: 558 PHNLDFRGRAYPMHPYLNHLGSDLCRGVLEFAEGRPLGKSGLRWLKIHLANLYAGGVDKL 617
Query: 721 SYDGRLAFTENHLEDIIDSADRPLEGRRWWLGAEDPFQCLAVCINLAEAVRSSSPNATVS 900
SYDGR+AFTENHLEDI DSADRPLEG+RWWLGAEDPFQCLAVCINL EA+RS SP +S
Sbjct: 618 SYDGRIAFTENHLEDIFDSADRPLEGKRWWLGAEDPFQCLAVCINLTEALRSPSPETMIS 677
Query: 901 HIPVHQDGSCNGLQHYAALGRDKLGAIAVNLVSGDKPADVYSEIAARVRDIMQRDAEEDP 1080
HIPVHQDGSCNGLQHYAALGRDKLGAIAVNLV+G+KPADVY+ IA RV +IM+ DA +DP
Sbjct: 678 HIPVHQDGSCNGLQHYAALGRDKLGAIAVNLVAGEKPADVYTGIATRVVEIMKNDALKDP 737
Query: 1081 AENPNALRARLLVNQVDRKLVKQTVMT----------XDQIKKRLKERNLVADDAEIFSA 1230
A +P+A RARLL++QVDRKLVKQTVMT +QIK+RLKER+++ DD+E+FSA
Sbjct: 738 ATDPDAARARLLLDQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLKERDMICDDSELFSA 797
Query: 1231 SCYAAKTTLTALGQMFESARKIMSWLGDCAKTIASQNHPVRWTTP 1365
SCYAAK TLTALG+MF++AR IM+WLGDCAK IA +N PVRWTTP
Sbjct: 798 SCYAAKVTLTALGEMFQAARSIMNWLGDCAKVIACENEPVRWTTP 842
>ref|XP_004956403.1| PREDICTED: DNA-directed RNA polymerase 1B, mitochondrial-like
[Setaria italica]
Length = 1005
Score = 749 bits (1933), Expect = 0.0
Identities = 354/465 (76%), Positives = 411/465 (88%), Gaps = 10/465 (2%)
Frame = +1
Query: 1 KEPKKLTRRYGVIECDPVILQRLDKTARHMVIPYVPMLVPPINWTGFDKGAHLYLRSYVM 180
KE +K +RRYGVI+CDP++ Q LD+TA+HMVIPY+PML+PPI WTG+DKGAHL+L SYVM
Sbjct: 400 KEQQKHSRRYGVIKCDPLVRQGLDRTAKHMVIPYMPMLIPPICWTGYDKGAHLFLPSYVM 459
Query: 181 RTHGARQQKQAIKKAPRKTMQTVFEALNTLGNTKWRVNKSVLSVVERIWSSGGRLADLVD 360
RTHGARQQ++A+K+APR+ MQ+VFEALNTLG+TKWRVNK VLS+++RIWSSGGRLADLVD
Sbjct: 460 RTHGARQQREAVKRAPREQMQSVFEALNTLGSTKWRVNKRVLSIIDRIWSSGGRLADLVD 519
Query: 361 REDIPLPEKPNTEDEAEIXXXXXXXXXXXXENNERHSRRCDVELKLAVARKMKDEEGFYY 540
R D+PLPEKP+TEDE + N+ERHS+RCDVELKLAVARKMKDEEGFYY
Sbjct: 520 RTDVPLPEKPDTEDETVLKKWRWHTRSVKKGNSERHSQRCDVELKLAVARKMKDEEGFYY 579
Query: 541 PHNLDFRGRAYPMHPYLNHLGSDLCRGVLEFAEGRPLGKSGLHWLKIHLANLYAGGVDKL 720
PHNLDFRGRAYPMHPYLNHLGSDLCRGVLEFAEGRPLG+SGL WLKIHLANLYAGGVDKL
Sbjct: 580 PHNLDFRGRAYPMHPYLNHLGSDLCRGVLEFAEGRPLGESGLRWLKIHLANLYAGGVDKL 639
Query: 721 SYDGRLAFTENHLEDIIDSADRPLEGRRWWLGAEDPFQCLAVCINLAEAVRSSSPNATVS 900
SY GR+AF ENHLE+I DSADRPLEG+RWWLGAEDPFQCLAVC+NL EA+RS SP AT+S
Sbjct: 640 SYAGRIAFAENHLEEIFDSADRPLEGKRWWLGAEDPFQCLAVCMNLTEALRSPSPEATIS 699
Query: 901 HIPVHQDGSCNGLQHYAALGRDKLGAIAVNLVSGDKPADVYSEIAARVRDIMQRDAEEDP 1080
HIPVHQDGSCNGLQHYAALGRDKLGAIAVNLV+G+KPADVYS IA RV +IM+RD+++DP
Sbjct: 700 HIPVHQDGSCNGLQHYAALGRDKLGAIAVNLVAGEKPADVYSGIATRVVEIMRRDSQKDP 759
Query: 1081 AENPNALRARLLVNQVDRKLVKQTVMT----------XDQIKKRLKERNLVADDAEIFSA 1230
+ +P+A RARL+++QVDRKLVKQTVMT +QIK+RLKER ++ADDAE+F A
Sbjct: 760 STDPDAARARLILDQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLKERGVIADDAELFGA 819
Query: 1231 SCYAAKTTLTALGQMFESARKIMSWLGDCAKTIASQNHPVRWTTP 1365
SCYAAK TLTALG+MF++AR IM+WLGDCAK IA +N PV+WTTP
Sbjct: 820 SCYAAKVTLTALGEMFQAARSIMNWLGDCAKVIACENEPVKWTTP 864
>ref|XP_003577161.1| PREDICTED: DNA-directed RNA polymerase 2,
chloroplastic/mitochondrial-like [Brachypodium
distachyon]
Length = 992
Score = 748 bits (1932), Expect = 0.0
Identities = 356/465 (76%), Positives = 411/465 (88%), Gaps = 10/465 (2%)
Frame = +1
Query: 1 KEPKKLTRRYGVIECDPVILQRLDKTARHMVIPYVPMLVPPINWTGFDKGAHLYLRSYVM 180
+E +K +RRYGVI+CDP+I Q LD+TA+HMVIPY+PML+PPI+WTG+DKGAHL+L SYVM
Sbjct: 387 REQQKSSRRYGVIKCDPLIRQGLDRTAKHMVIPYMPMLIPPISWTGYDKGAHLFLPSYVM 446
Query: 181 RTHGARQQKQAIKKAPRKTMQTVFEALNTLGNTKWRVNKSVLSVVERIWSSGGRLADLVD 360
RTHGARQQ++A+KKAP++ MQ +FEAL+TLG+TKWR+NK VLS+V+RIWSSGGRLADLVD
Sbjct: 447 RTHGARQQREAVKKAPKEQMQLIFEALDTLGSTKWRINKKVLSIVDRIWSSGGRLADLVD 506
Query: 361 REDIPLPEKPNTEDEAEIXXXXXXXXXXXXENNERHSRRCDVELKLAVARKMKDEEGFYY 540
R D+ LPEKP+TEDE E+ EN+ERHS+RCDVELKLAVARKMKDE GFYY
Sbjct: 507 RTDVALPEKPDTEDETELKKWRWNLRSVKKENSERHSQRCDVELKLAVARKMKDEVGFYY 566
Query: 541 PHNLDFRGRAYPMHPYLNHLGSDLCRGVLEFAEGRPLGKSGLHWLKIHLANLYAGGVDKL 720
PHNLDFRGRAYPMHPYLNHLGSDLCRGVLEF+EGRPLG SGL WLKIHLANLYAGGVDKL
Sbjct: 567 PHNLDFRGRAYPMHPYLNHLGSDLCRGVLEFSEGRPLGDSGLCWLKIHLANLYAGGVDKL 626
Query: 721 SYDGRLAFTENHLEDIIDSADRPLEGRRWWLGAEDPFQCLAVCINLAEAVRSSSPNATVS 900
SYDGR+AFTENHLEDI DSA+RPLEG+RWWLGAEDPFQCLAVC++L EA+RSSSP A +S
Sbjct: 627 SYDGRIAFTENHLEDIFDSANRPLEGKRWWLGAEDPFQCLAVCMDLTEALRSSSPEAMIS 686
Query: 901 HIPVHQDGSCNGLQHYAALGRDKLGAIAVNLVSGDKPADVYSEIAARVRDIMQRDAEEDP 1080
HIPVHQDGSCNGLQHYAALGRDKLGAIAVNLVSG+KPADVYS IA RV +IM+RDA++DP
Sbjct: 687 HIPVHQDGSCNGLQHYAALGRDKLGAIAVNLVSGEKPADVYSGIATRVVEIMRRDAQKDP 746
Query: 1081 AENPNALRARLLVNQVDRKLVKQTVMT----------XDQIKKRLKERNLVADDAEIFSA 1230
A +P+A RARLLV+QVDRKLVKQTVMT +QIK+RLKER ++ DD+E+F+A
Sbjct: 747 ALDPDAARARLLVDQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLKERGVIGDDSELFAA 806
Query: 1231 SCYAAKTTLTALGQMFESARKIMSWLGDCAKTIASQNHPVRWTTP 1365
SCYAAK TLTALG+MFE+AR IM+WLGDCAK IA +N PVRW TP
Sbjct: 807 SCYAAKVTLTALGEMFEAARSIMNWLGDCAKVIACENEPVRWMTP 851
>ref|XP_002278535.1| PREDICTED: DNA-directed RNA polymerase 2, chloroplastic/mitochondrial
[Vitis vinifera] gi|298204431|emb|CBI16911.3| unnamed
protein product [Vitis vinifera]
Length = 1035
Score = 744 bits (1921), Expect = 0.0
Identities = 350/465 (75%), Positives = 406/465 (87%), Gaps = 10/465 (2%)
Frame = +1
Query: 1 KEPKKLTRRYGVIECDPVILQRLDKTARHMVIPYVPMLVPPINWTGFDKGAHLYLRSYVM 180
+E KK+ RR+GVIECDP++ + L++TARHMVIPYVPMLVPP+ WTG+DKGAHL+L SYVM
Sbjct: 430 REAKKIGRRFGVIECDPLVKKGLERTARHMVIPYVPMLVPPLKWTGYDKGAHLFLPSYVM 489
Query: 181 RTHGARQQKQAIKKAPRKTMQTVFEALNTLGNTKWRVNKSVLSVVERIWSSGGRLADLVD 360
RTHGARQQ++A+K+APR ++ VFEALNTLGNTKWR+NK + VV+RIW+ GG LADLVD
Sbjct: 490 RTHGARQQREAVKRAPRNQLEPVFEALNTLGNTKWRINKRLFDVVDRIWAGGGCLADLVD 549
Query: 361 REDIPLPEKPNTEDEAEIXXXXXXXXXXXXENNERHSRRCDVELKLAVARKMKDEEGFYY 540
R D+PLPEKP+TEDEA++ N+ERHS+RCD+ELKLAVARKMKDE+GF+Y
Sbjct: 550 RNDVPLPEKPDTEDEAQLRKWKWKVKSVKKANSERHSQRCDIELKLAVARKMKDEDGFFY 609
Query: 541 PHNLDFRGRAYPMHPYLNHLGSDLCRGVLEFAEGRPLGKSGLHWLKIHLANLYAGGVDKL 720
PHNLDFRGRAYPMHPYLNHLGSDLCRG+LEFAEGRPLG SGLHWLKIHLANL+AGGVDKL
Sbjct: 610 PHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGSSGLHWLKIHLANLFAGGVDKL 669
Query: 721 SYDGRLAFTENHLEDIIDSADRPLEGRRWWLGAEDPFQCLAVCINLAEAVRSSSPNATVS 900
S++GR+ FTENHL+DI DSADRPLEG+RWWL AEDPFQ LA CINL+EA+RSSSP T+S
Sbjct: 670 SHEGRITFTENHLDDIFDSADRPLEGKRWWLNAEDPFQFLAACINLSEALRSSSPETTIS 729
Query: 901 HIPVHQDGSCNGLQHYAALGRDKLGAIAVNLVSGDKPADVYSEIAARVRDIMQRDAEEDP 1080
HIPVHQDGSCNGLQHYAALGRD+LGA AVNLV+G+KPADVYS IAARV DIM+RDAE+DP
Sbjct: 730 HIPVHQDGSCNGLQHYAALGRDQLGATAVNLVAGEKPADVYSGIAARVLDIMKRDAEKDP 789
Query: 1081 AENPNALRARLLVNQVDRKLVKQTVMT----------XDQIKKRLKERNLVADDAEIFSA 1230
A P+ALRAR+L+NQVDRKLVKQTVMT DQIK+RLKERN +ADD E+F A
Sbjct: 790 AIFPDALRARILINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERNAIADDVELFGA 849
Query: 1231 SCYAAKTTLTALGQMFESARKIMSWLGDCAKTIASQNHPVRWTTP 1365
+CYAAK TLTALG+MF++AR IMSWLGDCAK IAS+N PVRWTTP
Sbjct: 850 ACYAAKITLTALGEMFQAARSIMSWLGDCAKIIASENQPVRWTTP 894
>ref|XP_006348633.1| PREDICTED: DNA-directed RNA polymerase 1, mitochondrial-like [Solanum
tuberosum]
Length = 993
Score = 743 bits (1919), Expect = 0.0
Identities = 348/464 (75%), Positives = 406/464 (87%), Gaps = 10/464 (2%)
Frame = +1
Query: 4 EPKKLTRRYGVIECDPVILQRLDKTARHMVIPYVPMLVPPINWTGFDKGAHLYLRSYVMR 183
E K +RRYGVI+CDP++ + LDKTARHMVIPY+PMLVPP NW+G+D+GA+L+L SY+MR
Sbjct: 389 ETVKGSRRYGVIQCDPLVRKGLDKTARHMVIPYMPMLVPPQNWSGYDRGAYLFLPSYIMR 448
Query: 184 THGARQQKQAIKKAPRKTMQTVFEALNTLGNTKWRVNKSVLSVVERIWSSGGRLADLVDR 363
THGA+QQ++A+K+ P+K ++ VF+AL+TLGNTKWRVNK VL +++RIW+SGGRLADLVDR
Sbjct: 449 THGAKQQREAVKRVPKKQLEPVFQALDTLGNTKWRVNKRVLGILDRIWASGGRLADLVDR 508
Query: 364 EDIPLPEKPNTEDEAEIXXXXXXXXXXXXENNERHSRRCDVELKLAVARKMKDEEGFYYP 543
ED+PLPE+P+TEDE EI EN ERHS+RCD+ELKLAVARKMKDEEGFYYP
Sbjct: 509 EDVPLPEEPDTEDEEEIKKWKWKVKAAKKENCERHSQRCDIELKLAVARKMKDEEGFYYP 568
Query: 544 HNLDFRGRAYPMHPYLNHLGSDLCRGVLEFAEGRPLGKSGLHWLKIHLANLYAGGVDKLS 723
HNLDFRGRAYPMHPYLNHLGSDLCRG+LEF+EGRPLGKSGL WLKIHLAN+Y GGVDKLS
Sbjct: 569 HNLDFRGRAYPMHPYLNHLGSDLCRGILEFSEGRPLGKSGLRWLKIHLANVYGGGVDKLS 628
Query: 724 YDGRLAFTENHLEDIIDSADRPLEGRRWWLGAEDPFQCLAVCINLAEAVRSSSPNATVSH 903
Y+GR AF+ENH+EDI DSADRPLEGRRWWLGAEDPFQCLA CIN++EA+RS SP ++SH
Sbjct: 629 YEGRAAFSENHVEDIFDSADRPLEGRRWWLGAEDPFQCLATCINISEALRSPSPETSISH 688
Query: 904 IPVHQDGSCNGLQHYAALGRDKLGAIAVNLVSGDKPADVYSEIAARVRDIMQRDAEEDPA 1083
+P+HQDGSCNGLQHYAALGRDKLGA AVNLV+GDKPADVYS IAARV DIM+RDA++DPA
Sbjct: 689 MPIHQDGSCNGLQHYAALGRDKLGAAAVNLVAGDKPADVYSGIAARVLDIMKRDADKDPA 748
Query: 1084 ENPNALRARLLVNQVDRKLVKQTVMT----------XDQIKKRLKERNLVADDAEIFSAS 1233
+PN +RARLL+NQVDRKLVKQTVMT DQIK+RLKER + DD E+FSA+
Sbjct: 749 TDPNVMRARLLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGAIEDDNELFSAA 808
Query: 1234 CYAAKTTLTALGQMFESARKIMSWLGDCAKTIASQNHPVRWTTP 1365
CYAAKTTLTALG+MFE+AR IMSWLGDCAK IA +N PVRWTTP
Sbjct: 809 CYAAKTTLTALGEMFEAARSIMSWLGDCAKIIAMENQPVRWTTP 852
>gb|AAF32492.1|AF091838_1 single-subunit RNA polymerase G [Triticum aestivum]
Length = 1005
Score = 743 bits (1918), Expect = 0.0
Identities = 351/462 (75%), Positives = 409/462 (88%), Gaps = 10/462 (2%)
Frame = +1
Query: 10 KKLTRRYGVIECDPVILQRLDKTARHMVIPYVPMLVPPINWTGFDKGAHLYLRSYVMRTH 189
++ +RRYGVI+CDP++ Q LD+TA+HMVIPY+PML+PPINWTG+DKGAHL+L SYVMRTH
Sbjct: 403 QRKSRRYGVIKCDPLVRQGLDRTAKHMVIPYMPMLIPPINWTGYDKGAHLFLPSYVMRTH 462
Query: 190 GARQQKQAIKKAPRKTMQTVFEALNTLGNTKWRVNKSVLSVVERIWSSGGRLADLVDRED 369
GARQQ++A+KKAP++ MQT+FEAL+ LG+TKWRVNK VLS+V+RIWSSGGRLADLVDR D
Sbjct: 463 GARQQREAVKKAPKEQMQTIFEALDNLGSTKWRVNKEVLSIVDRIWSSGGRLADLVDRAD 522
Query: 370 IPLPEKPNTEDEAEIXXXXXXXXXXXXENNERHSRRCDVELKLAVARKMKDEEGFYYPHN 549
+ LPEKP+TEDEAE+ EN+ERHS+RCDVELKLAVARKMK+E GFYYPHN
Sbjct: 523 VSLPEKPDTEDEAELKKWRWSMRSAEKENSERHSQRCDVELKLAVARKMKEEAGFYYPHN 582
Query: 550 LDFRGRAYPMHPYLNHLGSDLCRGVLEFAEGRPLGKSGLHWLKIHLANLYAGGVDKLSYD 729
LDFRGRAYPMHPYLNHLGSDLCRGVLEF+EGRPLG+SGL WLKIHLANLY GGVDKLSYD
Sbjct: 583 LDFRGRAYPMHPYLNHLGSDLCRGVLEFSEGRPLGESGLRWLKIHLANLYGGGVDKLSYD 642
Query: 730 GRLAFTENHLEDIIDSADRPLEGRRWWLGAEDPFQCLAVCINLAEAVRSSSPNATVSHIP 909
GR+AFTENHL+DI DSA+RPLEG+RWWL AEDPFQCLAVC++L EA+RS SP +SHIP
Sbjct: 643 GRIAFTENHLDDIFDSANRPLEGKRWWLEAEDPFQCLAVCMDLNEALRSPSPETVISHIP 702
Query: 910 VHQDGSCNGLQHYAALGRDKLGAIAVNLVSGDKPADVYSEIAARVRDIMQRDAEEDPAEN 1089
VHQDGSCNGLQHYAALGRDKLGA+AVNLVSG+KPADVYS IAARV +IM+RDA++DPA++
Sbjct: 703 VHQDGSCNGLQHYAALGRDKLGAVAVNLVSGEKPADVYSGIAARVVEIMKRDAQKDPAKD 762
Query: 1090 PNALRARLLVNQVDRKLVKQTVMT----------XDQIKKRLKERNLVADDAEIFSASCY 1239
+A RARLLV+QVDRKLVKQTVMT +QIK+RLKER ++ADD+E+F ASCY
Sbjct: 763 ADAARARLLVDQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLKERGVIADDSELFGASCY 822
Query: 1240 AAKTTLTALGQMFESARKIMSWLGDCAKTIASQNHPVRWTTP 1365
AAK TLTALG+MFE+AR IM+WLGDCAK IA +N PVRWTTP
Sbjct: 823 AAKVTLTALGEMFEAARSIMTWLGDCAKVIACENEPVRWTTP 864
>gb|EOY01555.1| DNA-directed RNA polymerase isoform 3 [Theobroma cacao]
Length = 932
Score = 742 bits (1916), Expect = 0.0
Identities = 351/465 (75%), Positives = 407/465 (87%), Gaps = 10/465 (2%)
Frame = +1
Query: 1 KEPKKLTRRYGVIECDPVILQRLDKTARHMVIPYVPMLVPPINWTGFDKGAHLYLRSYVM 180
K+ K +RRYGVIECD ++ + L+KTARHMVIPY+PMLVPP NWTG+D+GA+L+L SYVM
Sbjct: 391 KDGNKGSRRYGVIECDLLVRKGLEKTARHMVIPYMPMLVPPQNWTGYDRGAYLFLPSYVM 450
Query: 181 RTHGARQQKQAIKKAPRKTMQTVFEALNTLGNTKWRVNKSVLSVVERIWSSGGRLADLVD 360
RTHGA+QQ++ +K+ PRK ++ +FEAL+TLGNTKWR+NK VL VV+R+W++GGR+A LVD
Sbjct: 451 RTHGAKQQRETVKRTPRKQLEPIFEALDTLGNTKWRINKRVLGVVDRLWANGGRVASLVD 510
Query: 361 REDIPLPEKPNTEDEAEIXXXXXXXXXXXXENNERHSRRCDVELKLAVARKMKDEEGFYY 540
RED+PLPEKP+TEDEAEI +NNERHS RCDVELKLAVARKM+DE+GFYY
Sbjct: 511 REDVPLPEKPDTEDEAEIQKWKWKVKAANKQNNERHSLRCDVELKLAVARKMRDEDGFYY 570
Query: 541 PHNLDFRGRAYPMHPYLNHLGSDLCRGVLEFAEGRPLGKSGLHWLKIHLANLYAGGVDKL 720
PHNLDFRGRAYPMHPYLNHLGSDLCRGVLEFAEGRPLGKSGL WLKIHLANLYAGGVDKL
Sbjct: 571 PHNLDFRGRAYPMHPYLNHLGSDLCRGVLEFAEGRPLGKSGLRWLKIHLANLYAGGVDKL 630
Query: 721 SYDGRLAFTENHLEDIIDSADRPLEGRRWWLGAEDPFQCLAVCINLAEAVRSSSPNATVS 900
SY+GR+AFTENHL+DI DSADRPLEGRRWWL AEDPFQCLA CINL+EA+RSSSP T+S
Sbjct: 631 SYEGRIAFTENHLDDIFDSADRPLEGRRWWLSAEDPFQCLAACINLSEALRSSSPETTIS 690
Query: 901 HIPVHQDGSCNGLQHYAALGRDKLGAIAVNLVSGDKPADVYSEIAARVRDIMQRDAEEDP 1080
H+PVHQDGSCNGLQHYAALGRDKLGA +VNLV+G+KPADVYS IAARV DIM+RDAE+DP
Sbjct: 691 HMPVHQDGSCNGLQHYAALGRDKLGAASVNLVAGEKPADVYSGIAARVVDIMRRDAEKDP 750
Query: 1081 AENPNALRARLLVNQVDRKLVKQTVMT----------XDQIKKRLKERNLVADDAEIFSA 1230
A NP+AL ARLL+NQVDRKLVKQTVMT DQIK+RLKER +ADD E+F A
Sbjct: 751 AINPHALHARLLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERCAIADDTEMFVA 810
Query: 1231 SCYAAKTTLTALGQMFESARKIMSWLGDCAKTIASQNHPVRWTTP 1365
SCYAA+TTLTALG+MF++AR IM+WLG+CAK I+S+N PVRW TP
Sbjct: 811 SCYAARTTLTALGEMFQAARSIMNWLGECAKVISSENQPVRWVTP 855
>gb|EOY01553.1| DNA-directed RNA polymerase isoform 1 [Theobroma cacao]
gi|508709657|gb|EOY01554.1| DNA-directed RNA polymerase
isoform 1 [Theobroma cacao]
Length = 996
Score = 742 bits (1916), Expect = 0.0
Identities = 351/465 (75%), Positives = 407/465 (87%), Gaps = 10/465 (2%)
Frame = +1
Query: 1 KEPKKLTRRYGVIECDPVILQRLDKTARHMVIPYVPMLVPPINWTGFDKGAHLYLRSYVM 180
K+ K +RRYGVIECD ++ + L+KTARHMVIPY+PMLVPP NWTG+D+GA+L+L SYVM
Sbjct: 391 KDGNKGSRRYGVIECDLLVRKGLEKTARHMVIPYMPMLVPPQNWTGYDRGAYLFLPSYVM 450
Query: 181 RTHGARQQKQAIKKAPRKTMQTVFEALNTLGNTKWRVNKSVLSVVERIWSSGGRLADLVD 360
RTHGA+QQ++ +K+ PRK ++ +FEAL+TLGNTKWR+NK VL VV+R+W++GGR+A LVD
Sbjct: 451 RTHGAKQQRETVKRTPRKQLEPIFEALDTLGNTKWRINKRVLGVVDRLWANGGRVASLVD 510
Query: 361 REDIPLPEKPNTEDEAEIXXXXXXXXXXXXENNERHSRRCDVELKLAVARKMKDEEGFYY 540
RED+PLPEKP+TEDEAEI +NNERHS RCDVELKLAVARKM+DE+GFYY
Sbjct: 511 REDVPLPEKPDTEDEAEIQKWKWKVKAANKQNNERHSLRCDVELKLAVARKMRDEDGFYY 570
Query: 541 PHNLDFRGRAYPMHPYLNHLGSDLCRGVLEFAEGRPLGKSGLHWLKIHLANLYAGGVDKL 720
PHNLDFRGRAYPMHPYLNHLGSDLCRGVLEFAEGRPLGKSGL WLKIHLANLYAGGVDKL
Sbjct: 571 PHNLDFRGRAYPMHPYLNHLGSDLCRGVLEFAEGRPLGKSGLRWLKIHLANLYAGGVDKL 630
Query: 721 SYDGRLAFTENHLEDIIDSADRPLEGRRWWLGAEDPFQCLAVCINLAEAVRSSSPNATVS 900
SY+GR+AFTENHL+DI DSADRPLEGRRWWL AEDPFQCLA CINL+EA+RSSSP T+S
Sbjct: 631 SYEGRIAFTENHLDDIFDSADRPLEGRRWWLSAEDPFQCLAACINLSEALRSSSPETTIS 690
Query: 901 HIPVHQDGSCNGLQHYAALGRDKLGAIAVNLVSGDKPADVYSEIAARVRDIMQRDAEEDP 1080
H+PVHQDGSCNGLQHYAALGRDKLGA +VNLV+G+KPADVYS IAARV DIM+RDAE+DP
Sbjct: 691 HMPVHQDGSCNGLQHYAALGRDKLGAASVNLVAGEKPADVYSGIAARVVDIMRRDAEKDP 750
Query: 1081 AENPNALRARLLVNQVDRKLVKQTVMT----------XDQIKKRLKERNLVADDAEIFSA 1230
A NP+AL ARLL+NQVDRKLVKQTVMT DQIK+RLKER +ADD E+F A
Sbjct: 751 AINPHALHARLLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERCAIADDTEMFVA 810
Query: 1231 SCYAAKTTLTALGQMFESARKIMSWLGDCAKTIASQNHPVRWTTP 1365
SCYAA+TTLTALG+MF++AR IM+WLG+CAK I+S+N PVRW TP
Sbjct: 811 SCYAARTTLTALGEMFQAARSIMNWLGECAKVISSENQPVRWVTP 855
>tpg|DAA63638.1| TPA: RNA polymerase T phage-like 1 [Zea mays]
Length = 975
Score = 742 bits (1915), Expect = 0.0
Identities = 351/465 (75%), Positives = 407/465 (87%), Gaps = 10/465 (2%)
Frame = +1
Query: 1 KEPKKLTRRYGVIECDPVILQRLDKTARHMVIPYVPMLVPPINWTGFDKGAHLYLRSYVM 180
KE +K +RRYGVI+CDP++ Q LD+TA+HMVIPY+PML+PPI WTG+DKGAHL+L SYVM
Sbjct: 370 KEQQKSSRRYGVIKCDPLVRQGLDRTAKHMVIPYMPMLIPPICWTGYDKGAHLFLPSYVM 429
Query: 181 RTHGARQQKQAIKKAPRKTMQTVFEALNTLGNTKWRVNKSVLSVVERIWSSGGRLADLVD 360
RTHGARQQ+ A+K+APR+ MQ VFEALNTLG+TKWRVNK VLS+V+RIWS+GGRLADLVD
Sbjct: 430 RTHGARQQRDAVKRAPREQMQFVFEALNTLGSTKWRVNKRVLSIVDRIWSNGGRLADLVD 489
Query: 361 REDIPLPEKPNTEDEAEIXXXXXXXXXXXXENNERHSRRCDVELKLAVARKMKDEEGFYY 540
R D+P+PEKP+TEDE + +N+ERHS+RCDVELKLAVARKMKDEEGFYY
Sbjct: 490 RTDVPVPEKPDTEDETLLKNWKWHLRAAKKKNSERHSQRCDVELKLAVARKMKDEEGFYY 549
Query: 541 PHNLDFRGRAYPMHPYLNHLGSDLCRGVLEFAEGRPLGKSGLHWLKIHLANLYAGGVDKL 720
PHNLDFRGRAYPMHPYLNHLGSDLCRGVLEFAEGRPLGKSGL WLKIHLANLYA GVDKL
Sbjct: 550 PHNLDFRGRAYPMHPYLNHLGSDLCRGVLEFAEGRPLGKSGLRWLKIHLANLYAAGVDKL 609
Query: 721 SYDGRLAFTENHLEDIIDSADRPLEGRRWWLGAEDPFQCLAVCINLAEAVRSSSPNATVS 900
SYDGR+AF ENHLE+I DSADRPLEGRRWWLGAEDPFQCLAVC+NL EA+RSSSP T+S
Sbjct: 610 SYDGRIAFAENHLEEIFDSADRPLEGRRWWLGAEDPFQCLAVCMNLTEALRSSSPETTIS 669
Query: 901 HIPVHQDGSCNGLQHYAALGRDKLGAIAVNLVSGDKPADVYSEIAARVRDIMQRDAEEDP 1080
HIPVHQDGSCNGLQHYAALG+DKLGAIAVNLV+G+KPADVY+ IA RV +IM+ DA++DP
Sbjct: 670 HIPVHQDGSCNGLQHYAALGKDKLGAIAVNLVAGEKPADVYTGIANRVMEIMRMDAQKDP 729
Query: 1081 AENPNALRARLLVNQVDRKLVKQTVMT----------XDQIKKRLKERNLVADDAEIFSA 1230
+ P+A RARL+V+QVDRKLVKQTVMT +QI++RLKER ++ +D+E+F A
Sbjct: 730 SVEPDAARARLIVDQVDRKLVKQTVMTSVYGVTYIGAREQIRRRLKERGVIPNDSELFGA 789
Query: 1231 SCYAAKTTLTALGQMFESARKIMSWLGDCAKTIASQNHPVRWTTP 1365
SCYAAK TLTALG+MF++AR IM+WLGDCAK IA +N PVRWTTP
Sbjct: 790 SCYAAKVTLTALGEMFQAARSIMNWLGDCAKVIACENEPVRWTTP 834
>gb|EMJ26582.1| hypothetical protein PRUPE_ppa000780mg [Prunus persica]
Length = 1006
Score = 741 bits (1913), Expect = 0.0
Identities = 347/465 (74%), Positives = 405/465 (87%), Gaps = 10/465 (2%)
Frame = +1
Query: 1 KEPKKLTRRYGVIECDPVILQRLDKTARHMVIPYVPMLVPPINWTGFDKGAHLYLRSYVM 180
++ +K +RRYGVIECDP++ + ++KTARHMV+PY+PMLVPPINWTG+D+GA+L+L SYVM
Sbjct: 401 RDTQKTSRRYGVIECDPIVRKGMEKTARHMVMPYMPMLVPPINWTGYDRGAYLFLPSYVM 460
Query: 181 RTHGARQQKQAIKKAPRKTMQTVFEALNTLGNTKWRVNKSVLSVVERIWSSGGRLADLVD 360
RTHGA+QQ++ +K+ PRK ++ VFEAL+TLG+TKWRVNK VL V++RIW+SGGRLADLVD
Sbjct: 461 RTHGAKQQREVVKRTPRKQLEPVFEALDTLGSTKWRVNKRVLGVIDRIWASGGRLADLVD 520
Query: 361 REDIPLPEKPNTEDEAEIXXXXXXXXXXXXENNERHSRRCDVELKLAVARKMKDEEGFYY 540
RED+PLPE+P+TEDEAEI EN+ERHS+RCD+ELKLA +RKMKDEEGFYY
Sbjct: 521 REDVPLPEEPDTEDEAEIRKWKWKLKAAKKENSERHSQRCDIELKLAASRKMKDEEGFYY 580
Query: 541 PHNLDFRGRAYPMHPYLNHLGSDLCRGVLEFAEGRPLGKSGLHWLKIHLANLYAGGVDKL 720
PHNLDFRGRAYPMHPYLNHLGSD+CRG+LEF+EGR LGKSGL WLKIHLANLYAGGVDKL
Sbjct: 581 PHNLDFRGRAYPMHPYLNHLGSDMCRGILEFSEGRHLGKSGLRWLKIHLANLYAGGVDKL 640
Query: 721 SYDGRLAFTENHLEDIIDSADRPLEGRRWWLGAEDPFQCLAVCINLAEAVRSSSPNATVS 900
S+D R AFTENH+++I DSADRPLEGRRWWLGAEDPFQCLA CINL EA+RS SP T+S
Sbjct: 641 SFDDRAAFTENHVDEIFDSADRPLEGRRWWLGAEDPFQCLAACINLCEALRSPSPETTIS 700
Query: 901 HIPVHQDGSCNGLQHYAALGRDKLGAIAVNLVSGDKPADVYSEIAARVRDIMQRDAEEDP 1080
++PVHQDGSCNGLQHYAALGRDKLGA AVNLV GDKPADVYS IAARV DIM+ DAE+DP
Sbjct: 701 YMPVHQDGSCNGLQHYAALGRDKLGAAAVNLVGGDKPADVYSGIAARVLDIMRNDAEKDP 760
Query: 1081 AENPNALRARLLVNQVDRKLVKQTVMT----------XDQIKKRLKERNLVADDAEIFSA 1230
A NPNAL ARLL+NQVDRKLVKQTVMT DQIK+RLKER +ADD +F+A
Sbjct: 761 ATNPNALHARLLINQVDRKLVKQTVMTSVYGVTYVGARDQIKRRLKERGSIADDTALFAA 820
Query: 1231 SCYAAKTTLTALGQMFESARKIMSWLGDCAKTIASQNHPVRWTTP 1365
+CYAA+TTLTALG+MFE+AR IMSWLG+CAK IAS+N PVRW TP
Sbjct: 821 ACYAARTTLTALGEMFEAARSIMSWLGECAKVIASENQPVRWITP 865
>sp|Q8L6J5.2|RPO1B_TOBAC RecName: Full=DNA-directed RNA polymerase 1B, mitochondrial; AltName:
Full=NictaRpoT1-tom; AltName: Full=T7 bacteriophage-type
single subunit RNA polymerase 1B; Flags: Precursor
Length = 1002
Score = 741 bits (1912), Expect = 0.0
Identities = 347/464 (74%), Positives = 404/464 (87%), Gaps = 10/464 (2%)
Frame = +1
Query: 4 EPKKLTRRYGVIECDPVILQRLDKTARHMVIPYVPMLVPPINWTGFDKGAHLYLRSYVMR 183
E K +RRYGVI+CDP++ + LDKTARHMVIPY+PMLVPP +W G+DKG +L+L SY+MR
Sbjct: 398 ETMKGSRRYGVIQCDPLVRKGLDKTARHMVIPYMPMLVPPQSWLGYDKGGYLFLPSYIMR 457
Query: 184 THGARQQKQAIKKAPRKTMQTVFEALNTLGNTKWRVNKSVLSVVERIWSSGGRLADLVDR 363
THGA+QQ++A+K+ P+K ++ VF+AL+TLGNTKWRVN+ VL +V+RIW+SGGRLADLVDR
Sbjct: 458 THGAKQQREAVKRVPKKQLEPVFQALDTLGNTKWRVNRKVLGIVDRIWASGGRLADLVDR 517
Query: 364 EDIPLPEKPNTEDEAEIXXXXXXXXXXXXENNERHSRRCDVELKLAVARKMKDEEGFYYP 543
ED+PLPE P+TEDEAEI EN ERHS+RCD+ELKLAVARKMKDE+GFYYP
Sbjct: 518 EDVPLPEAPDTEDEAEIRKWKWKVKGVKKENCERHSQRCDIELKLAVARKMKDEDGFYYP 577
Query: 544 HNLDFRGRAYPMHPYLNHLGSDLCRGVLEFAEGRPLGKSGLHWLKIHLANLYAGGVDKLS 723
HNLDFRGRAYPMHPYLNHLGSDLCRG+LEFAEGRPLG SGL WLKIHLAN+Y GGVDKLS
Sbjct: 578 HNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGTSGLRWLKIHLANVYGGGVDKLS 637
Query: 724 YDGRLAFTENHLEDIIDSADRPLEGRRWWLGAEDPFQCLAVCINLAEAVRSSSPNATVSH 903
Y+GR+AF+ENHLEDI DSA+RPLEG+RWWLGAEDPFQCLA CIN+AEA+RS SP +S+
Sbjct: 638 YEGRVAFSENHLEDIFDSAERPLEGKRWWLGAEDPFQCLATCINIAEALRSPSPETAISY 697
Query: 904 IPVHQDGSCNGLQHYAALGRDKLGAIAVNLVSGDKPADVYSEIAARVRDIMQRDAEEDPA 1083
+P+HQDGSCNGLQHYAALGRDKLGA AVNLV+GDKPADVYS IAARV DIM+RDA +DPA
Sbjct: 698 MPIHQDGSCNGLQHYAALGRDKLGAAAVNLVAGDKPADVYSGIAARVLDIMKRDAAKDPA 757
Query: 1084 ENPNALRARLLVNQVDRKLVKQTVMT----------XDQIKKRLKERNLVADDAEIFSAS 1233
+PN +RARLL+NQVDRKLVKQTVMT DQIKKRLKER ++ DD E+F+A+
Sbjct: 758 NDPNVMRARLLINQVDRKLVKQTVMTSVYGVTYIGARDQIKKRLKERGVIEDDNELFAAA 817
Query: 1234 CYAAKTTLTALGQMFESARKIMSWLGDCAKTIASQNHPVRWTTP 1365
CYAAKTTLTALG+MFE+AR IMSWLGDCAK IA +NHPVRWTTP
Sbjct: 818 CYAAKTTLTALGEMFEAARSIMSWLGDCAKIIAMENHPVRWTTP 861
>emb|CAC95022.1| mitochondrial RNA polymerase [Nicotiana tabacum]
Length = 715
Score = 741 bits (1912), Expect = 0.0
Identities = 347/464 (74%), Positives = 404/464 (87%), Gaps = 10/464 (2%)
Frame = +1
Query: 4 EPKKLTRRYGVIECDPVILQRLDKTARHMVIPYVPMLVPPINWTGFDKGAHLYLRSYVMR 183
E K +RRYGVI+CDP++ + LDKTARHMVIPY+PMLVPP +W G+DKG +L+L SY+MR
Sbjct: 111 ETMKGSRRYGVIQCDPLVRKGLDKTARHMVIPYMPMLVPPQSWLGYDKGGYLFLPSYIMR 170
Query: 184 THGARQQKQAIKKAPRKTMQTVFEALNTLGNTKWRVNKSVLSVVERIWSSGGRLADLVDR 363
THGA+QQ++A+K+ P+K ++ VF+AL+TLGNTKWRVN+ VL +V+RIW+SGGRLADLVDR
Sbjct: 171 THGAKQQREAVKRVPKKQLEPVFQALDTLGNTKWRVNRKVLGIVDRIWASGGRLADLVDR 230
Query: 364 EDIPLPEKPNTEDEAEIXXXXXXXXXXXXENNERHSRRCDVELKLAVARKMKDEEGFYYP 543
ED+PLPE P+TEDEAEI EN ERHS+RCD+ELKLAVARKMKDE+GFYYP
Sbjct: 231 EDVPLPEAPDTEDEAEIRKWKWKVKGVKKENCERHSQRCDIELKLAVARKMKDEDGFYYP 290
Query: 544 HNLDFRGRAYPMHPYLNHLGSDLCRGVLEFAEGRPLGKSGLHWLKIHLANLYAGGVDKLS 723
HNLDFRGRAYPMHPYLNHLGSDLCRG+LEFAEGRPLG SGL WLKIHLAN+Y GGVDKLS
Sbjct: 291 HNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGTSGLRWLKIHLANVYGGGVDKLS 350
Query: 724 YDGRLAFTENHLEDIIDSADRPLEGRRWWLGAEDPFQCLAVCINLAEAVRSSSPNATVSH 903
Y+GR+AF+ENHLEDI DSA+RPLEG+RWWLGAEDPFQCLA CIN+AEA+RS SP +S+
Sbjct: 351 YEGRVAFSENHLEDIFDSAERPLEGKRWWLGAEDPFQCLATCINIAEALRSPSPETAISY 410
Query: 904 IPVHQDGSCNGLQHYAALGRDKLGAIAVNLVSGDKPADVYSEIAARVRDIMQRDAEEDPA 1083
+P+HQDGSCNGLQHYAALGRDKLGA AVNLV+GDKPADVYS IAARV DIM+RDA +DPA
Sbjct: 411 MPIHQDGSCNGLQHYAALGRDKLGAAAVNLVAGDKPADVYSGIAARVLDIMKRDAAKDPA 470
Query: 1084 ENPNALRARLLVNQVDRKLVKQTVMT----------XDQIKKRLKERNLVADDAEIFSAS 1233
+PN +RARLL+NQVDRKLVKQTVMT DQIKKRLKER ++ DD E+F+A+
Sbjct: 471 NDPNVMRARLLINQVDRKLVKQTVMTSVYGVTYIGARDQIKKRLKERGVIEDDNELFAAA 530
Query: 1234 CYAAKTTLTALGQMFESARKIMSWLGDCAKTIASQNHPVRWTTP 1365
CYAAKTTLTALG+MFE+AR IMSWLGDCAK IA +NHPVRWTTP
Sbjct: 531 CYAAKTTLTALGEMFEAARSIMSWLGDCAKIIAMENHPVRWTTP 574
>emb|CAC82574.2| phage-type RNA polymerase [Nicotiana tabacum]
Length = 1002
Score = 740 bits (1910), Expect = 0.0
Identities = 347/464 (74%), Positives = 403/464 (86%), Gaps = 10/464 (2%)
Frame = +1
Query: 4 EPKKLTRRYGVIECDPVILQRLDKTARHMVIPYVPMLVPPINWTGFDKGAHLYLRSYVMR 183
E K +RRYGVI+CDP++ + LDKTARHMVIPY+PMLVPP +W G+DKG +L+L SY+MR
Sbjct: 398 ETMKGSRRYGVIQCDPLVRKGLDKTARHMVIPYMPMLVPPQSWLGYDKGGYLFLPSYIMR 457
Query: 184 THGARQQKQAIKKAPRKTMQTVFEALNTLGNTKWRVNKSVLSVVERIWSSGGRLADLVDR 363
THGA+QQ++A+K+ P+K ++ VF+AL+TLGNTKWRVN+ VL +V RIW+SGGRLADLVDR
Sbjct: 458 THGAKQQREAVKRVPKKQLEPVFQALDTLGNTKWRVNRKVLGIVNRIWASGGRLADLVDR 517
Query: 364 EDIPLPEKPNTEDEAEIXXXXXXXXXXXXENNERHSRRCDVELKLAVARKMKDEEGFYYP 543
ED+PLPE P+TEDEAEI EN ERHS+RCD+ELKLAVARKMKDE+GFYYP
Sbjct: 518 EDVPLPEAPDTEDEAEIRKWKWKVKGVKKENCERHSQRCDIELKLAVARKMKDEDGFYYP 577
Query: 544 HNLDFRGRAYPMHPYLNHLGSDLCRGVLEFAEGRPLGKSGLHWLKIHLANLYAGGVDKLS 723
HNLDFRGRAYPMHPYLNHLGSDLCRG+LEFAEGRPLG SGL WLKIHLAN+Y GGVDKLS
Sbjct: 578 HNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGTSGLRWLKIHLANVYGGGVDKLS 637
Query: 724 YDGRLAFTENHLEDIIDSADRPLEGRRWWLGAEDPFQCLAVCINLAEAVRSSSPNATVSH 903
Y+GR+AF+ENHLEDI DSA+RPLEG+RWWLGAEDPFQCLA CIN+AEA+RS SP +S+
Sbjct: 638 YEGRVAFSENHLEDIFDSAERPLEGKRWWLGAEDPFQCLATCINIAEALRSPSPETAISY 697
Query: 904 IPVHQDGSCNGLQHYAALGRDKLGAIAVNLVSGDKPADVYSEIAARVRDIMQRDAEEDPA 1083
+P+HQDGSCNGLQHYAALGRDKLGA AVNLV+GDKPADVYS IAARV DIM+RDA +DPA
Sbjct: 698 MPIHQDGSCNGLQHYAALGRDKLGAAAVNLVAGDKPADVYSGIAARVLDIMKRDAAKDPA 757
Query: 1084 ENPNALRARLLVNQVDRKLVKQTVMT----------XDQIKKRLKERNLVADDAEIFSAS 1233
+PN +RARLL+NQVDRKLVKQTVMT DQIKKRLKER ++ DD E+F+A+
Sbjct: 758 NDPNVMRARLLINQVDRKLVKQTVMTSVYGVTYIGARDQIKKRLKERGVIEDDNELFAAA 817
Query: 1234 CYAAKTTLTALGQMFESARKIMSWLGDCAKTIASQNHPVRWTTP 1365
CYAAKTTLTALG+MFE+AR IMSWLGDCAK IA +NHPVRWTTP
Sbjct: 818 CYAAKTTLTALGEMFEAARSIMSWLGDCAKIIAMENHPVRWTTP 861