BLASTX nr result

ID: Zingiber24_contig00032107 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00032107
         (448 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003579664.1| PREDICTED: uncharacterized protein LOC100825...    57   3e-06
ref|NP_001173921.1| Os04g0403901 [Oryza sativa Japonica Group] g...    55   7e-06
emb|CAE05359.3| OJ000315_02.4 [Oryza sativa Japonica Group]            55   7e-06
dbj|BAJ98948.1| predicted protein [Hordeum vulgare subsp. vulgar...    55   1e-05

>ref|XP_003579664.1| PREDICTED: uncharacterized protein LOC100825877 [Brachypodium
           distachyon]
          Length = 115

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 35/90 (38%), Positives = 41/90 (45%), Gaps = 7/90 (7%)
 Frame = -3

Query: 410 ASTFVAGGEAGGYKEGSHRRMGQQVAPQSSWSAG-APKCVCAPPTHAGSFKCRLHRAKL- 237
           +S+    G A   K       G   AP  +   G APKCVCAPPTHAGSFKCRLHR    
Sbjct: 20  SSSTTPTGAAASPKTKRRGWPGSASAPSGAGGHGPAPKCVCAPPTHAGSFKCRLHRTSSH 79

Query: 236 -----CRVQSAPPLRKATPDQHLPAPDAKN 162
                    S+PP        H  AP + +
Sbjct: 80  GGGHGSHPSSSPPSPANAAPPHPAAPSSSS 109


>ref|NP_001173921.1| Os04g0403901 [Oryza sativa Japonica Group]
           gi|38346149|emb|CAE02024.2| OSJNBb0118P14.9 [Oryza
           sativa Japonica Group] gi|116309449|emb|CAH66521.1|
           H0502B11.1 [Oryza sativa Indica Group]
           gi|255675427|dbj|BAH92649.1| Os04g0403901 [Oryza sativa
           Japonica Group]
          Length = 108

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 38/93 (40%), Positives = 45/93 (48%), Gaps = 20/93 (21%)
 Frame = -3

Query: 413 MASTFV--AGGEAGGYKEGSHRR----MGQQVAPQS--SWSAGA------------PKCV 294
           MAS +V  AG E   +  G H       G   +P+   SWS+ A            PKCV
Sbjct: 1   MASNYVDTAGEEGRFHGHGHHSSGTTPTGAAASPKMRRSWSSAASASSGGGGHGSGPKCV 60

Query: 293 CAPPTHAGSFKCRLHRAKLCRVQSAPPLRKATP 195
           CAP THAGSFKCRLHR+      S+ P   A P
Sbjct: 61  CAPATHAGSFKCRLHRSSSHGHPSSSPTAAAAP 93


>emb|CAE05359.3| OJ000315_02.4 [Oryza sativa Japonica Group]
          Length = 175

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 38/93 (40%), Positives = 45/93 (48%), Gaps = 20/93 (21%)
 Frame = -3

Query: 413 MASTFV--AGGEAGGYKEGSHRR----MGQQVAPQS--SWSAGA------------PKCV 294
           MAS +V  AG E   +  G H       G   +P+   SWS+ A            PKCV
Sbjct: 68  MASNYVDTAGEEGRFHGHGHHSSGTTPTGAAASPKMRRSWSSAASASSGGGGHGSGPKCV 127

Query: 293 CAPPTHAGSFKCRLHRAKLCRVQSAPPLRKATP 195
           CAP THAGSFKCRLHR+      S+ P   A P
Sbjct: 128 CAPATHAGSFKCRLHRSSSHGHPSSSPTAAAAP 160


>dbj|BAJ98948.1| predicted protein [Hordeum vulgare subsp. vulgare]
           gi|326531978|dbj|BAK01365.1| predicted protein [Hordeum
           vulgare subsp. vulgare]
          Length = 119

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 32/76 (42%), Positives = 36/76 (47%)
 Frame = -3

Query: 389 GEAGGYKEGSHRRMGQQVAPQSSWSAGAPKCVCAPPTHAGSFKCRLHRAKLCRVQSAPPL 210
           GEA   K    R  G   AP  +    A KCVCAP THAGSFKCR HR            
Sbjct: 29  GEAASPKNTRRRWPGSASAPSGAGHGPASKCVCAPATHAGSFKCRFHRTNSQGHGHGQGS 88

Query: 209 RKATPDQHLPAPDAKN 162
           R ++P    P+P A N
Sbjct: 89  RPSSP----PSPAAAN 100


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