BLASTX nr result
ID: Zingiber24_contig00032103
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00032103
(636 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAB37529.1| putative protein [Arabidopsis thaliana] gi|72707... 51 9e-08
ref|NP_195502.2| protein EMBRYO SAC DEVELOPMENT ARREST 40 [Arabi... 51 1e-07
dbj|BAC41972.1| unknown protein [Arabidopsis thaliana] gi|290290... 51 1e-07
ref|XP_003517133.1| PREDICTED: uncharacterized protein LOC100794... 51 3e-07
ref|NP_849514.1| protein EMBRYO SAC DEVELOPMENT ARREST 40 [Arabi... 51 7e-07
ref|XP_006357754.1| PREDICTED: uncharacterized protein LOC102587... 48 1e-06
ref|XP_004231968.1| PREDICTED: uncharacterized protein LOC101250... 48 3e-06
ref|XP_006357753.1| PREDICTED: uncharacterized protein LOC102587... 47 3e-06
ref|XP_002262605.2| PREDICTED: uncharacterized protein LOC100245... 57 3e-06
emb|CBI18619.3| unnamed protein product [Vitis vinifera] 57 3e-06
>emb|CAB37529.1| putative protein [Arabidopsis thaliana] gi|7270772|emb|CAB80454.1|
putative protein [Arabidopsis thaliana]
Length = 720
Score = 51.2 bits (121), Expect(3) = 9e-08
Identities = 28/58 (48%), Positives = 32/58 (55%)
Frame = +2
Query: 347 SRCRICSQSPKVS*GTPVFKAECSHTFHCHFPCITADVKSHNHLSCLCVALPSSRNPS 520
S+C IC QS K GT +F AECSHTF HFPC+ + N LS V S R S
Sbjct: 148 SKCGICLQSAKAGRGTAIFTAECSHTF--HFPCVASRAGDRNLLSDCPVCGASWRETS 203
Score = 30.0 bits (66), Expect(3) = 9e-08
Identities = 15/34 (44%), Positives = 22/34 (64%), Gaps = 3/34 (8%)
Frame = +1
Query: 163 STPLSPRSPSKFALFKN---FSKVPFFSLNRSNS 255
STP SP+SP+ F+L K+ F+KV + N +S
Sbjct: 111 STPSSPKSPASFSLLKSKLCFTKVRILNRNNQSS 144
Score = 20.4 bits (41), Expect(3) = 9e-08
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = +3
Query: 3 RSCAKLGFLSDGKRHSNPSTPR 68
R+ + L FLS S PS+P+
Sbjct: 96 RNRSPLSFLSVSSSSSTPSSPK 117
>ref|NP_195502.2| protein EMBRYO SAC DEVELOPMENT ARREST 40 [Arabidopsis thaliana]
gi|332661449|gb|AEE86849.1| zinc finger (C3HC4-type RING
finger) family protein [Arabidopsis thaliana]
Length = 739
Score = 51.2 bits (121), Expect(3) = 1e-07
Identities = 28/58 (48%), Positives = 32/58 (55%)
Frame = +2
Query: 347 SRCRICSQSPKVS*GTPVFKAECSHTFHCHFPCITADVKSHNHLSCLCVALPSSRNPS 520
S+C IC QS K GT +F AECSHTF HFPC+ + N LS V S R S
Sbjct: 167 SKCGICLQSAKAGRGTAIFTAECSHTF--HFPCVASRAGDRNLLSDCPVCGASWRETS 222
Score = 29.6 bits (65), Expect(3) = 1e-07
Identities = 17/33 (51%), Positives = 23/33 (69%), Gaps = 3/33 (9%)
Frame = +1
Query: 163 STPLSPRSPSKFALFKN---FSKVPFFSLNRSN 252
STP SP+SP+ F+L K+ F+KV LNR+N
Sbjct: 111 STPSSPKSPASFSLLKSKLCFTKVRI--LNRNN 141
Score = 20.4 bits (41), Expect(3) = 1e-07
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = +3
Query: 3 RSCAKLGFLSDGKRHSNPSTPR 68
R+ + L FLS S PS+P+
Sbjct: 96 RNRSPLSFLSVSSSSSTPSSPK 117
>dbj|BAC41972.1| unknown protein [Arabidopsis thaliana] gi|29029038|gb|AAO64898.1|
At4g37890 [Arabidopsis thaliana]
Length = 739
Score = 51.2 bits (121), Expect(3) = 1e-07
Identities = 28/58 (48%), Positives = 32/58 (55%)
Frame = +2
Query: 347 SRCRICSQSPKVS*GTPVFKAECSHTFHCHFPCITADVKSHNHLSCLCVALPSSRNPS 520
S+C IC QS K GT +F AECSHTF HFPC+ + N LS V S R S
Sbjct: 167 SKCGICLQSAKAGRGTAIFTAECSHTF--HFPCVASRAGDRNLLSDCPVCGASWRETS 222
Score = 29.6 bits (65), Expect(3) = 1e-07
Identities = 17/33 (51%), Positives = 23/33 (69%), Gaps = 3/33 (9%)
Frame = +1
Query: 163 STPLSPRSPSKFALFKN---FSKVPFFSLNRSN 252
STP SP+SP+ F+L K+ F+KV LNR+N
Sbjct: 111 STPSSPKSPASFSLLKSKLCFTKVRI--LNRNN 141
Score = 20.4 bits (41), Expect(3) = 1e-07
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = +3
Query: 3 RSCAKLGFLSDGKRHSNPSTPR 68
R+ + L FLS S PS+P+
Sbjct: 96 RNRSPLSFLSVSSSSSTPSSPK 117
>ref|XP_003517133.1| PREDICTED: uncharacterized protein LOC100794888 [Glycine max]
Length = 680
Score = 50.8 bits (120), Expect(2) = 3e-07
Identities = 26/46 (56%), Positives = 30/46 (65%)
Frame = +2
Query: 347 SRCRICSQSPKVS*GTPVFKAECSHTFHCHFPCITADVKSHNHLSC 484
SRC IC QS + GT +F AECSHTF HFPCI VK H ++C
Sbjct: 124 SRCGICMQSVRSGQGTAIFTAECSHTF--HFPCI---VKKHPIVTC 164
Score = 30.0 bits (66), Expect(2) = 3e-07
Identities = 22/71 (30%), Positives = 33/71 (46%), Gaps = 10/71 (14%)
Frame = +1
Query: 43 GTVIRPRRGSC*RQSFASPS-----HCS-----RYYRRSRNTALFHRKAFSTPLSPRSPS 192
G P R C Q ++PS CS + +++ LFH S P SP+SPS
Sbjct: 54 GFFSNPSRPRCESQPSSTPSLRCQTTCSVPNSPKLQCKTKTPRLFHN---SNPSSPKSPS 110
Query: 193 KFALFKNFSKV 225
F+L K+ ++
Sbjct: 111 SFSLLKSTLRI 121
>ref|NP_849514.1| protein EMBRYO SAC DEVELOPMENT ARREST 40 [Arabidopsis thaliana]
gi|332661450|gb|AEE86850.1| zinc finger (C3HC4-type RING
finger) family protein [Arabidopsis thaliana]
Length = 711
Score = 51.2 bits (121), Expect(3) = 7e-07
Identities = 28/58 (48%), Positives = 32/58 (55%)
Frame = +2
Query: 347 SRCRICSQSPKVS*GTPVFKAECSHTFHCHFPCITADVKSHNHLSCLCVALPSSRNPS 520
S+C IC QS K GT +F AECSHTF HFPC+ + N LS V S R S
Sbjct: 139 SKCGICLQSAKAGRGTAIFTAECSHTF--HFPCVASRAGDRNLLSDCPVCGASWRETS 194
Score = 26.9 bits (58), Expect(3) = 7e-07
Identities = 15/31 (48%), Positives = 21/31 (67%)
Frame = +1
Query: 163 STPLSPRSPSKFALFKNFSKVPFFSLNRSNS 255
STP SP+SP+ F+L K SK+ F + S+S
Sbjct: 111 STPSSPKSPASFSLLK--SKLCFTKSSISSS 139
Score = 20.4 bits (41), Expect(3) = 7e-07
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = +3
Query: 3 RSCAKLGFLSDGKRHSNPSTPR 68
R+ + L FLS S PS+P+
Sbjct: 96 RNRSPLSFLSVSSSSSTPSSPK 117
>ref|XP_006357754.1| PREDICTED: uncharacterized protein LOC102587194 isoform X2 [Solanum
tuberosum]
Length = 711
Score = 47.8 bits (112), Expect(2) = 1e-06
Identities = 24/52 (46%), Positives = 31/52 (59%)
Frame = +2
Query: 329 SLFF**SRCRICSQSPKVS*GTPVFKAECSHTFHCHFPCITADVKSHNHLSC 484
SL F ++C C Q+ K GT +F AECSH+F HFPCI A ++ L C
Sbjct: 109 SLRFPKTKCGTCLQTVKTGQGTAIFTAECSHSF--HFPCIAALLRKQTALVC 158
Score = 30.8 bits (68), Expect(2) = 1e-06
Identities = 15/35 (42%), Positives = 23/35 (65%)
Frame = +1
Query: 124 RSRNTALFHRKAFSTPLSPRSPSKFALFKNFSKVP 228
+++N+ F + STP SPRSPS F+L K+ + P
Sbjct: 81 KTKNSPRFFNR--STPSSPRSPSTFSLLKSSLRFP 113
>ref|XP_004231968.1| PREDICTED: uncharacterized protein LOC101250463 [Solanum
lycopersicum]
Length = 718
Score = 47.8 bits (112), Expect(2) = 3e-06
Identities = 24/52 (46%), Positives = 31/52 (59%)
Frame = +2
Query: 329 SLFF**SRCRICSQSPKVS*GTPVFKAECSHTFHCHFPCITADVKSHNHLSC 484
SL F ++C C Q+ K GT +F AECSH+F HFPCI A ++ L C
Sbjct: 112 SLRFSKTKCGTCLQTVKTGQGTAIFTAECSHSF--HFPCIAALLRKQTALVC 161
Score = 29.6 bits (65), Expect(2) = 3e-06
Identities = 17/36 (47%), Positives = 24/36 (66%), Gaps = 3/36 (8%)
Frame = +1
Query: 124 RSRNTALFHRKAFSTPLSPRSPSKFALFKN---FSK 222
+++N+ F + STP SPRSPS F+L K+ FSK
Sbjct: 84 KTKNSPRFFNR--STPSSPRSPSTFSLLKSSLRFSK 117
>ref|XP_006357753.1| PREDICTED: uncharacterized protein LOC102587194 isoform X1 [Solanum
tuberosum]
Length = 712
Score = 46.6 bits (109), Expect(2) = 3e-06
Identities = 21/46 (45%), Positives = 28/46 (60%)
Frame = +2
Query: 347 SRCRICSQSPKVS*GTPVFKAECSHTFHCHFPCITADVKSHNHLSC 484
++C C Q+ K GT +F AECSH+F HFPCI A ++ L C
Sbjct: 116 TKCGTCLQTVKTGQGTAIFTAECSHSF--HFPCIAALLRKQTALVC 159
Score = 30.8 bits (68), Expect(2) = 3e-06
Identities = 15/35 (42%), Positives = 23/35 (65%)
Frame = +1
Query: 124 RSRNTALFHRKAFSTPLSPRSPSKFALFKNFSKVP 228
+++N+ F + STP SPRSPS F+L K+ + P
Sbjct: 81 KTKNSPRFFNR--STPSSPRSPSTFSLLKSSLRFP 113
>ref|XP_002262605.2| PREDICTED: uncharacterized protein LOC100245763 [Vitis vinifera]
Length = 725
Score = 57.4 bits (137), Expect = 3e-06
Identities = 27/46 (58%), Positives = 29/46 (63%)
Frame = +2
Query: 347 SRCRICSQSPKVS*GTPVFKAECSHTFHCHFPCITADVKSHNHLSC 484
SRC IC QS K GT +F AECSH F HFPCI A V+ H L C
Sbjct: 119 SRCGICIQSVKTGQGTAIFTAECSHAF--HFPCIAAHVRKHGSLVC 162
>emb|CBI18619.3| unnamed protein product [Vitis vinifera]
Length = 656
Score = 57.4 bits (137), Expect = 3e-06
Identities = 27/46 (58%), Positives = 29/46 (63%)
Frame = +2
Query: 347 SRCRICSQSPKVS*GTPVFKAECSHTFHCHFPCITADVKSHNHLSC 484
SRC IC QS K GT +F AECSH F HFPCI A V+ H L C
Sbjct: 119 SRCGICIQSVKTGQGTAIFTAECSHAF--HFPCIAAHVRKHGSLVC 162