BLASTX nr result

ID: Zingiber24_contig00032012 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00032012
         (201 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002298262.2| hypothetical protein POPTR_0001s22260g [Popu...    57   3e-06
gb|EXB38416.1| Protein IQ-DOMAIN 1 [Morus notabilis]                   55   7e-06

>ref|XP_002298262.2| hypothetical protein POPTR_0001s22260g [Populus trichocarpa]
           gi|550347885|gb|EEE83067.2| hypothetical protein
           POPTR_0001s22260g [Populus trichocarpa]
          Length = 437

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 33/61 (54%), Positives = 41/61 (67%), Gaps = 4/61 (6%)
 Frame = +2

Query: 2   AIGSRSYSNPKERTSQLESQAR-RLSLPNSGLGVGKQA---SYKVAINQSANKKPLKDAQ 169
           AI +RS+SNPKERT+QL+ QAR RLSLPNSG G G Q    S        +++KP+KD  
Sbjct: 360 AIVTRSHSNPKERTTQLDKQARKRLSLPNSGGGTGAQVARHSRNATRGAPSSQKPIKDRS 419

Query: 170 K 172
           K
Sbjct: 420 K 420


>gb|EXB38416.1| Protein IQ-DOMAIN 1 [Morus notabilis]
          Length = 436

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 34/69 (49%), Positives = 50/69 (72%), Gaps = 6/69 (8%)
 Frame = +2

Query: 2   AIGSRSYSNPKERTSQLESQA-RRLSLPNSGLGVGKQAS---YKVAINQSAN-KKPLKDA 166
           ++ SRS+SNPKER++Q + QA +RLSLPNSG+G G QA+   Y+ A   + N +KP+K+ 
Sbjct: 356 SVTSRSHSNPKERSTQTDKQAKKRLSLPNSGVGSGVQAARQVYRSAAKGTPNSQKPVKER 415

Query: 167 QK-SEREDN 190
            K + RED+
Sbjct: 416 SKPNGREDS 424


Top