BLASTX nr result
ID: Zingiber24_contig00032002
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00032002
(601 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002266865.1| PREDICTED: RING-H2 finger protein ATL80-like... 125 7e-27
ref|XP_006342165.1| PREDICTED: RING-H2 finger protein ATL80-like... 121 2e-25
ref|XP_002274304.1| PREDICTED: RING-H2 finger protein ATL80 [Vit... 120 4e-25
emb|CAN59779.1| hypothetical protein VITISV_024654 [Vitis vinifera] 120 4e-25
ref|XP_004238452.1| PREDICTED: RING-H2 finger protein ATL80-like... 119 6e-25
ref|XP_006435418.1| hypothetical protein CICLE_v10004041mg [Citr... 117 2e-24
ref|XP_002276539.1| PREDICTED: RING-H2 finger protein ATL80 [Vit... 117 2e-24
gb|ESW28255.1| hypothetical protein PHAVU_003G271400g [Phaseolus... 116 5e-24
gb|ADI71977.1| E3 ubiquitin ligase [Capsicum annuum] 115 7e-24
ref|NP_001130972.1| uncharacterized LOC100192077 [Zea mays] gi|1... 102 8e-24
gb|ADW66128.1| RING-H2 finger protein RHA3b [Solanum nigrum] 115 9e-24
gb|EOY15342.1| RING/U-box superfamily protein, putative [Theobro... 114 3e-23
gb|EMT16971.1| RING-H2 finger protein ATL1B [Aegilops tauschii] 114 3e-23
dbj|BAK04827.1| predicted protein [Hordeum vulgare subsp. vulgare] 113 5e-23
ref|XP_006660955.1| PREDICTED: RING-H2 finger protein ATL80-like... 112 6e-23
ref|XP_002510714.1| protein with unknown function [Ricinus commu... 112 6e-23
gb|EXB56281.1| RING-H2 finger protein ATL80 [Morus notabilis] 112 8e-23
ref|XP_006342531.1| PREDICTED: RING-H2 finger protein ATL80-like... 112 1e-22
ref|XP_003537694.1| PREDICTED: RING-H2 finger protein ATL8-like ... 112 1e-22
ref|NP_001063886.1| Os09g0554200 [Oryza sativa Japonica Group] g... 112 1e-22
>ref|XP_002266865.1| PREDICTED: RING-H2 finger protein ATL80-like [Vitis vinifera]
Length = 153
Score = 125 bits (315), Expect = 7e-27
Identities = 56/78 (71%), Positives = 61/78 (78%)
Frame = +2
Query: 188 PPCKGLKKKALGDLPKVAYAASADAKPAECPICLAEFVGGDEIRILPQCGHGFHVGCVDT 367
P KGLKKK L LPKV YAA P +C ICL EFVGGDEIR+LPQCGHGFHVGC+DT
Sbjct: 72 PANKGLKKKILRSLPKVTYAAETAGNPTDCAICLTEFVGGDEIRVLPQCGHGFHVGCIDT 131
Query: 368 WLMSRSSCPFCRRVLVVA 421
WL S SSCP CR++LVVA
Sbjct: 132 WLGSHSSCPSCRQILVVA 149
>ref|XP_006342165.1| PREDICTED: RING-H2 finger protein ATL80-like [Solanum tuberosum]
Length = 180
Score = 121 bits (303), Expect = 2e-25
Identities = 60/102 (58%), Positives = 69/102 (67%), Gaps = 15/102 (14%)
Frame = +2
Query: 188 PPCKGLKKKALGDLPKVAYAASADAKPAECPICLAEFVGGDEIRILPQCGHGFHVGCVDT 367
P KGLKKK L LPK +Y+A AK +EC ICLAEFV GDEIR+LPQCGHGFHVGC+DT
Sbjct: 67 PANKGLKKKVLKSLPKFSYSAEHAAKFSECAICLAEFVVGDEIRVLPQCGHGFHVGCIDT 126
Query: 368 WLMSRSSCPFCRRVLVV---------------AAPAAQPSPR 448
WL S SSCP CR++LVV +AP A+P R
Sbjct: 127 WLGSHSSCPSCRQILVVTRCHKCGELPVASSSSAPVAEPESR 168
>ref|XP_002274304.1| PREDICTED: RING-H2 finger protein ATL80 [Vitis vinifera]
Length = 184
Score = 120 bits (300), Expect = 4e-25
Identities = 54/78 (69%), Positives = 59/78 (75%)
Frame = +2
Query: 188 PPCKGLKKKALGDLPKVAYAASADAKPAECPICLAEFVGGDEIRILPQCGHGFHVGCVDT 367
P KGLKKK L LPKV YAA +C ICL EFVGGDEIR+LPQCGHGFHVGC+DT
Sbjct: 72 PANKGLKKKILRSLPKVTYAAETAGNLTDCAICLTEFVGGDEIRVLPQCGHGFHVGCIDT 131
Query: 368 WLMSRSSCPFCRRVLVVA 421
WL S SCP CR++LVVA
Sbjct: 132 WLGSHCSCPSCRQILVVA 149
>emb|CAN59779.1| hypothetical protein VITISV_024654 [Vitis vinifera]
Length = 312
Score = 120 bits (300), Expect = 4e-25
Identities = 54/78 (69%), Positives = 59/78 (75%)
Frame = +2
Query: 188 PPCKGLKKKALGDLPKVAYAASADAKPAECPICLAEFVGGDEIRILPQCGHGFHVGCVDT 367
P KGLKKK L LPKV YAA +C ICL EFVGGDEIR+LPQCGHGFHVGC+DT
Sbjct: 72 PANKGLKKKILRSLPKVTYAAETAGNLTDCAICLTEFVGGDEIRVLPQCGHGFHVGCIDT 131
Query: 368 WLMSRSSCPFCRRVLVVA 421
WL S SCP CR++LVVA
Sbjct: 132 WLGSHCSCPSCRQILVVA 149
>ref|XP_004238452.1| PREDICTED: RING-H2 finger protein ATL80-like [Solanum lycopersicum]
Length = 183
Score = 119 bits (298), Expect = 6e-25
Identities = 59/103 (57%), Positives = 68/103 (66%), Gaps = 16/103 (15%)
Frame = +2
Query: 188 PPCKGLKKKALGDLPKVAYAASADAKPAECPICLAEFVGGDEIRILPQCGHGFHVGCVDT 367
P KGLKKK L LPK +Y+A AK +EC ICLAEF GDEIR+LPQCGHGFHVGC+DT
Sbjct: 69 PANKGLKKKVLKSLPKFSYSAEHAAKFSECAICLAEFAVGDEIRVLPQCGHGFHVGCIDT 128
Query: 368 WLMSRSSCPFCRRVLVV----------------AAPAAQPSPR 448
WL S SSCP CR++LVV +AP A+P R
Sbjct: 129 WLGSHSSCPSCRQILVVTRCHKCGELPVASSSSSAPVAEPESR 171
>ref|XP_006435418.1| hypothetical protein CICLE_v10004041mg [Citrus clementina]
gi|568839917|ref|XP_006473922.1| PREDICTED: RING-H2
finger protein ATL80-like [Citrus sinensis]
gi|557537540|gb|ESR48658.1| hypothetical protein
CICLE_v10004041mg [Citrus clementina]
Length = 198
Score = 117 bits (294), Expect = 2e-24
Identities = 59/101 (58%), Positives = 70/101 (69%), Gaps = 4/101 (3%)
Frame = +2
Query: 131 RLRRGG----DPRGASLRADLXAPPCKGLKKKALGDLPKVAYAASADAKPAECPICLAEF 298
RL GG +P G S R +P KGLKKK L LPK + + + AK ++C ICL EF
Sbjct: 57 RLSGGGAAATNPSGTSTR---NSPANKGLKKKILRTLPKQTFTSESVAKFSDCAICLTEF 113
Query: 299 VGGDEIRILPQCGHGFHVGCVDTWLMSRSSCPFCRRVLVVA 421
V GDEIR+LPQCGHGFHV C+DTWL S SSCP CR++LVVA
Sbjct: 114 VNGDEIRVLPQCGHGFHVACIDTWLGSHSSCPSCRQILVVA 154
>ref|XP_002276539.1| PREDICTED: RING-H2 finger protein ATL80 [Vitis vinifera]
gi|296082570|emb|CBI21575.3| unnamed protein product
[Vitis vinifera]
Length = 182
Score = 117 bits (293), Expect = 2e-24
Identities = 65/112 (58%), Positives = 71/112 (63%), Gaps = 1/112 (0%)
Frame = +2
Query: 86 LRCATGDPAIGSVRSRLRRGGDPRGASLRADLXAPPC-KGLKKKALGDLPKVAYAASADA 262
L C G I R R G GA RA P KGLKKK L LPK+ + A+
Sbjct: 39 LICVVG--LIAVARCAWLRRGSAGGA--RASATQPAANKGLKKKILQSLPKLTHDATVSG 94
Query: 263 KPAECPICLAEFVGGDEIRILPQCGHGFHVGCVDTWLMSRSSCPFCRRVLVV 418
K AEC ICLAEFV GDEIR+LPQCGHGFHV CVDTWL S SSCP CR++LVV
Sbjct: 95 KFAECAICLAEFVEGDEIRVLPQCGHGFHVLCVDTWLSSHSSCPSCRQILVV 146
>gb|ESW28255.1| hypothetical protein PHAVU_003G271400g [Phaseolus vulgaris]
Length = 199
Score = 116 bits (290), Expect = 5e-24
Identities = 53/80 (66%), Positives = 58/80 (72%), Gaps = 1/80 (1%)
Frame = +2
Query: 185 APPCKGLKKKALGDLPKVAYAASAD-AKPAECPICLAEFVGGDEIRILPQCGHGFHVGCV 361
AP KGLKK+ + LPK YA D K +ECPICL EF GGDE+R+LPQCGHGFHV CV
Sbjct: 67 APANKGLKKRVVNSLPKFTYAGEGDRCKWSECPICLTEFAGGDEVRVLPQCGHGFHVACV 126
Query: 362 DTWLMSRSSCPFCRRVLVVA 421
DTWL S SSCP CR VVA
Sbjct: 127 DTWLSSHSSCPSCRAPFVVA 146
>gb|ADI71977.1| E3 ubiquitin ligase [Capsicum annuum]
Length = 197
Score = 115 bits (289), Expect = 7e-24
Identities = 62/111 (55%), Positives = 68/111 (61%)
Frame = +2
Query: 86 LRCATGDPAIGSVRSRLRRGGDPRGASLRADLXAPPCKGLKKKALGDLPKVAYAASADAK 265
L C G A+ R G G S A AP KGLKKK L LPK Y A K
Sbjct: 46 LICVLGLVAVARCNWIRRISGSIAGNSAFAS--APANKGLKKKVLKSLPKFNYGAEHADK 103
Query: 266 PAECPICLAEFVGGDEIRILPQCGHGFHVGCVDTWLMSRSSCPFCRRVLVV 418
+EC ICLAEF G+EIR+LPQCGHGFHVGC+DTWL S SSCP CR +LVV
Sbjct: 104 FSECAICLAEFAVGEEIRVLPQCGHGFHVGCIDTWLGSHSSCPSCRSILVV 154
>ref|NP_001130972.1| uncharacterized LOC100192077 [Zea mays] gi|194690596|gb|ACF79382.1|
unknown [Zea mays] gi|414864563|tpg|DAA43120.1| TPA:
putative RING zinc finger domain superfamily protein
[Zea mays]
Length = 188
Score = 102 bits (253), Expect(2) = 8e-24
Identities = 48/92 (52%), Positives = 62/92 (67%), Gaps = 8/92 (8%)
Frame = +2
Query: 197 KGLKKKALGDLPKVAYAASADAKP--------AECPICLAEFVGGDEIRILPQCGHGFHV 352
+GL+KKAL LP +AY + A+ AEC ICL+EF +E+R+LPQCGH FHV
Sbjct: 69 RGLRKKALRALPSLAYEDAVAARAGDGAAEVLAECAICLSEFAPREEVRVLPQCGHAFHV 128
Query: 353 GCVDTWLMSRSSCPFCRRVLVVAAPAAQPSPR 448
C+DTWL + SSCP CRRVLVV A++ P+
Sbjct: 129 ACIDTWLAAHSSCPSCRRVLVVGDAASKRPPQ 160
Score = 34.7 bits (78), Expect(2) = 8e-24
Identities = 19/32 (59%), Positives = 20/32 (62%), Gaps = 3/32 (9%)
Frame = +3
Query: 63 AARILQANS---DVLPATQPSDPFAVDSDVVV 149
A R+LQ NS LPA P P AVDSDVVV
Sbjct: 5 ARRLLQTNSVQYPTLPAADPPSPLAVDSDVVV 36
>gb|ADW66128.1| RING-H2 finger protein RHA3b [Solanum nigrum]
Length = 142
Score = 115 bits (288), Expect = 9e-24
Identities = 52/78 (66%), Positives = 60/78 (76%)
Frame = +2
Query: 188 PPCKGLKKKALGDLPKVAYAASADAKPAECPICLAEFVGGDEIRILPQCGHGFHVGCVDT 367
P KGLKKK L LPK +Y + AK +EC ICL EFV GDEIR+LPQCGHGFHVGC+DT
Sbjct: 27 PANKGLKKKVLRSLPKFSYTSERSAKFSECAICLMEFVVGDEIRVLPQCGHGFHVGCIDT 86
Query: 368 WLMSRSSCPFCRRVLVVA 421
WL S SSCP CR++ VV+
Sbjct: 87 WLGSHSSCPSCRQIPVVS 104
>gb|EOY15342.1| RING/U-box superfamily protein, putative [Theobroma cacao]
Length = 193
Score = 114 bits (284), Expect = 3e-23
Identities = 58/113 (51%), Positives = 68/113 (60%), Gaps = 1/113 (0%)
Frame = +2
Query: 86 LRCATGDPAIGSVRSRLRRGGDPRGASLRADLXAPPC-KGLKKKALGDLPKVAYAASADA 262
L C G A+ R G PP KGLKKK L LPK ++A + A
Sbjct: 45 LICVLGLIAVARCAWLRRLSGSSASNPADTPRPTPPANKGLKKKILKSLPKATFSAESSA 104
Query: 263 KPAECPICLAEFVGGDEIRILPQCGHGFHVGCVDTWLMSRSSCPFCRRVLVVA 421
K ++C ICLAEF GDEIR+LPQCGHGFHV C+D WL S SSCP CR++LVVA
Sbjct: 105 KFSDCAICLAEFEVGDEIRVLPQCGHGFHVACIDMWLGSHSSCPSCRQILVVA 157
>gb|EMT16971.1| RING-H2 finger protein ATL1B [Aegilops tauschii]
Length = 170
Score = 114 bits (284), Expect = 3e-23
Identities = 56/97 (57%), Positives = 65/97 (67%), Gaps = 10/97 (10%)
Frame = +2
Query: 185 APPCKGLKKKALGDLPKVAY-------AASADAKPAECPICLAEFVGGDEIRILPQCGHG 343
A PCKG+KKKAL LP V++ A + + AEC ICLAEF GDE+R+LP CGHG
Sbjct: 53 AAPCKGIKKKALQALPTVSWRPQQSTEADEEEGERAECAICLAEFAPGDEVRVLPTCGHG 112
Query: 344 FHVGCVDTWLMSRSSCPFCRRVLVVAA---PAAQPSP 445
FH CVD WL+S S+CP CRR LVVAA PA SP
Sbjct: 113 FHAACVDVWLLSNSTCPSCRRALVVAAAQLPAVTESP 149
>dbj|BAK04827.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 245
Score = 113 bits (282), Expect = 5e-23
Identities = 67/137 (48%), Positives = 78/137 (56%), Gaps = 17/137 (12%)
Frame = +2
Query: 86 LRCATGDPAI-GSVRSRLRRGGDPRGASLRADLXAPPCKGLKKKALGDLPKVAYAASADA 262
L C G A+ G RSR GG A A A P KGLKK+AL LP++AY + A
Sbjct: 87 LLCVVGLAAVTGCARSRRGAGG----ARSAAPDAAAPSKGLKKRALMALPRLAYEDAVAA 142
Query: 263 KPA------------ECPICLAEFVGGDEIRILPQCGHGFHVGCVDTWLMSRSSCPFCRR 406
+ A EC ICL+EF +EIR+LPQCGHGFHV CVD WL + SSCP CRR
Sbjct: 143 RGAMAGEEREGVLLSECAICLSEFADKEEIRVLPQCGHGFHVACVDAWLRAHSSCPSCRR 202
Query: 407 VLVV----AAPAAQPSP 445
V+VV AAP P P
Sbjct: 203 VVVVVVADAAPRGMPPP 219
>ref|XP_006660955.1| PREDICTED: RING-H2 finger protein ATL80-like [Oryza brachyantha]
Length = 206
Score = 112 bits (281), Expect = 6e-23
Identities = 54/89 (60%), Positives = 62/89 (69%), Gaps = 2/89 (2%)
Frame = +2
Query: 185 APPCKGLKKKALGDLPKVAYAASADAKPA--ECPICLAEFVGGDEIRILPQCGHGFHVGC 358
AP KGLKKKAL LP V++ A + + EC ICLAEF GDE+R+LP CGHGFH C
Sbjct: 81 APASKGLKKKALQSLPTVSFGAGEEEEEERPECAICLAEFARGDEVRVLPPCGHGFHAAC 140
Query: 359 VDTWLMSRSSCPFCRRVLVVAAPAAQPSP 445
VD WL+S S+CP CRR LVV AP PSP
Sbjct: 141 VDVWLLSSSTCPSCRRALVVVAP---PSP 166
>ref|XP_002510714.1| protein with unknown function [Ricinus communis]
gi|223551415|gb|EEF52901.1| protein with unknown
function [Ricinus communis]
Length = 194
Score = 112 bits (281), Expect = 6e-23
Identities = 52/88 (59%), Positives = 63/88 (71%)
Frame = +2
Query: 158 GASLRADLXAPPCKGLKKKALGDLPKVAYAASADAKPAECPICLAEFVGGDEIRILPQCG 337
GA + + + KGLKKK L LPK ++A + K +C ICLAEF GDEIR+LPQCG
Sbjct: 75 GAPAQPPVPSAANKGLKKKILRSLPKQTFSADSTPKFYDCAICLAEFAPGDEIRVLPQCG 134
Query: 338 HGFHVGCVDTWLMSRSSCPFCRRVLVVA 421
HGFHV C+DTWL S SSCP CR++LVVA
Sbjct: 135 HGFHVSCIDTWLGSHSSCPSCRQILVVA 162
>gb|EXB56281.1| RING-H2 finger protein ATL80 [Morus notabilis]
Length = 186
Score = 112 bits (280), Expect = 8e-23
Identities = 54/93 (58%), Positives = 62/93 (66%)
Frame = +2
Query: 143 GGDPRGASLRADLXAPPCKGLKKKALGDLPKVAYAASADAKPAECPICLAEFVGGDEIRI 322
G AS PP KGLKKK L LPK+++ A K ++C ICLAEF GDEIR
Sbjct: 61 GSSAASASSSRPPPPPPNKGLKKKILRSLPKLSFTADLAPKFSDCAICLAEFAIGDEIRE 120
Query: 323 LPQCGHGFHVGCVDTWLMSRSSCPFCRRVLVVA 421
LPQCGH FHV C+DTWL S SSCP CR++LVVA
Sbjct: 121 LPQCGHAFHVACIDTWLGSHSSCPSCRQILVVA 153
>ref|XP_006342531.1| PREDICTED: RING-H2 finger protein ATL80-like [Solanum tuberosum]
Length = 192
Score = 112 bits (279), Expect = 1e-22
Identities = 52/88 (59%), Positives = 61/88 (69%)
Frame = +2
Query: 158 GASLRADLXAPPCKGLKKKALGDLPKVAYAASADAKPAECPICLAEFVGGDEIRILPQCG 337
G + D P KGLKKK L LPK +Y + +EC ICL EFV GDEIR+LPQCG
Sbjct: 67 GGNSDDDPLPPANKGLKKKVLKSLPKFSYTPERSVQFSECAICLMEFVIGDEIRVLPQCG 126
Query: 338 HGFHVGCVDTWLMSRSSCPFCRRVLVVA 421
HGFHVGC+DTWL S SSCP CR++ VV+
Sbjct: 127 HGFHVGCIDTWLGSHSSCPSCRQIPVVS 154
>ref|XP_003537694.1| PREDICTED: RING-H2 finger protein ATL8-like [Glycine max]
Length = 226
Score = 112 bits (279), Expect = 1e-22
Identities = 64/115 (55%), Positives = 70/115 (60%), Gaps = 3/115 (2%)
Frame = +2
Query: 86 LRCATGDPAIGSVRSRLRRGGDPRGASLRADLXAPPCKGLKKKALGDLPKVAYAASADAK 265
L C G A+ R R G G S R L KGLKKK L LPK AY S +K
Sbjct: 44 LICVVGLVAVA--RCAWLRRGSGAGNSPRQALAN---KGLKKKVLQSLPKFAYVDSNPSK 98
Query: 266 ---PAECPICLAEFVGGDEIRILPQCGHGFHVGCVDTWLMSRSSCPFCRRVLVVA 421
+EC ICLAEF GDEIR+LPQCGHGFHV C+DTWL S SSCP CR+VL VA
Sbjct: 99 WLATSECAICLAEFAAGDEIRVLPQCGHGFHVPCIDTWLGSHSSCPSCRQVLAVA 153
>ref|NP_001063886.1| Os09g0554200 [Oryza sativa Japonica Group]
gi|113632119|dbj|BAF25800.1| Os09g0554200 [Oryza sativa
Japonica Group] gi|125564648|gb|EAZ10028.1| hypothetical
protein OsI_32332 [Oryza sativa Indica Group]
gi|215766157|dbj|BAG98385.1| unnamed protein product
[Oryza sativa Japonica Group]
Length = 201
Score = 112 bits (279), Expect = 1e-22
Identities = 58/112 (51%), Positives = 73/112 (65%), Gaps = 6/112 (5%)
Frame = +2
Query: 128 SRLRRGGDPRGASLRADLXAPP--CKGLKKKALGDLPKVAYAASADAKPAE----CPICL 289
+R R +P ++ A+ PP CKGLK+KAL LP V++A +A A+ E C ICL
Sbjct: 51 ARCSRLCNPSSFAVEAEEAMPPAPCKGLKRKALLSLPTVSFAEAAAAEEEEERPECAICL 110
Query: 290 AEFVGGDEIRILPQCGHGFHVGCVDTWLMSRSSCPFCRRVLVVAAPAAQPSP 445
AEF GDE+R+LP CGHGFH CVD WL+S S+CP CRR +VV A PSP
Sbjct: 111 AEFARGDEVRVLPPCGHGFHAACVDVWLVSTSTCPSCRRAIVV---LAAPSP 159