BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00031911
         (1904 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001058413.2| Os06g0688100 [Oryza sativa Japonica Group] g...   587   e-165
gb|EEC81212.1| hypothetical protein OsI_24246 [Oryza sativa Indi...   587   e-165
ref|XP_006656405.1| PREDICTED: RNA polymerase I-specific transcr...   583   e-164
ref|XP_003563455.1| PREDICTED: RNA polymerase I-specific transcr...   566   e-158
ref|XP_006656406.1| PREDICTED: RNA polymerase I-specific transcr...   561   e-157
ref|XP_004966190.1| PREDICTED: RNA polymerase I-specific transcr...   543   e-151
ref|XP_004966189.1| PREDICTED: RNA polymerase I-specific transcr...   528   e-147
gb|AFW69236.1| hypothetical protein ZEAMMB73_457339 [Zea mays]        513   e-142
gb|AFW69235.1| hypothetical protein ZEAMMB73_457339 [Zea mays]        471   e-130
ref|XP_002437492.1| hypothetical protein SORBIDRAFT_10g028030 [S...   470   e-129
gb|EMT22842.1| hypothetical protein F775_01666 [Aegilops tauschii]    459   e-126
emb|CBI37506.3| unnamed protein product [Vitis vinifera]              459   e-126
ref|XP_004155826.1| PREDICTED: RNA polymerase I-specific transcr...   455   e-125
ref|XP_004133864.1| PREDICTED: RNA polymerase I-specific transcr...   455   e-125
ref|XP_002263973.2| PREDICTED: RNA polymerase I-specific transcr...   452   e-124
gb|EXB36892.1| hypothetical protein L484_016497 [Morus notabilis]     449   e-123
ref|XP_006483466.1| PREDICTED: RNA polymerase I-specific transcr...   449   e-123
ref|XP_003534228.1| PREDICTED: RNA polymerase I-specific transcr...   447   e-123
ref|XP_003547884.1| PREDICTED: RNA polymerase I-specific transcr...   447   e-123
ref|XP_006483559.1| PREDICTED: RNA polymerase I-specific transcr...   446   e-122

>ref|NP_001058413.2| Os06g0688100 [Oryza sativa Japonica Group]
            gi|52076695|dbj|BAD45608.1| putative RNA polymerase I
            transcription factor RRN3 [Oryza sativa Japonica Group]
            gi|52077031|dbj|BAD46064.1| putative RNA polymerase I
            transcription factor RRN3 [Oryza sativa Japonica Group]
            gi|215704896|dbj|BAG94924.1| unnamed protein product
            [Oryza sativa Japonica Group] gi|222636116|gb|EEE66248.1|
            hypothetical protein OsJ_22429 [Oryza sativa Japonica
            Group] gi|255677342|dbj|BAF20327.2| Os06g0688100 [Oryza
            sativa Japonica Group]
          Length = 622

 Score =  587 bits (1514), Expect = e-165
 Identities = 311/554 (56%), Positives = 399/554 (72%), Gaps = 3/554 (0%)
 Frame = +2

Query: 137  MGVEPQGNGFSVDGAEEGFISDSEAFASVINVLDGVRMAPSLVAQVDKEQYYYLVSVVNP 316
            MG E + +   V  AEE  ISDS+AF  V +VL  VRM P  V   DKE+Y  L+S+V+ 
Sbjct: 1    MGAELRRDDMEV--AEED-ISDSQAFRFVEHVLQSVRMDPFQVDLRDKEEYDSLLSIVDS 57

Query: 317  GRKIGPVDEALTVTALKALTRAVFKIDIMYHGALLNNIFLTSIWDYDLETRNAFLELITT 496
             +K    DEAL VT LKAL+ AV KIDIMYH ALLNNIF  SIW  + +TR+A L LIT 
Sbjct: 58   SKKRSYDDEALLVTTLKALSEAVSKIDIMYHHALLNNIFTMSIWYLNSDTRDALLSLITR 117

Query: 497  MATLPDKFLENCLHVLLCNFRPPNWLKAPFCHSKRWLMRKKEVHSELHLALHCITTLVPL 676
            +A + D+FL  CL +L+ NF PP  L A F    RWL RKKE++S+LH +L  I+  VPL
Sbjct: 118  LAAVADQFLRECLQMLVNNFTPPGSLTA-FIGQPRWLARKKEIYSQLHESLRMISDTVPL 176

Query: 677  APVRLKCLIEKLMSRVTEDKYIMVTYVEGLLGLEKNEIGKFLGSTVMAKVVDLLTDLDVN 856
            AP  LK +I++ M ++ ++K  MV++VE +LGL+ + +G  +G+ ++AKVVDLLT+LDVN
Sbjct: 177  APRMLKDIIDRSMPKLFDNKAKMVSFVECMLGLDNDRMGDLIGALLLAKVVDLLTELDVN 236

Query: 857  IPWEDILQEEQNKSVFVIELGDSNQDDEHSSIKQNGVLKC---NVFADKLDGLMVVVCEH 1027
            I WEDILQ+E NK +F +EL D  +D++  S+ Q G       N  A+KLDGLMVV CEH
Sbjct: 237  ITWEDILQDEHNKGIFDMELEDLGEDED--SLGQEGTKALFGGNACAEKLDGLMVVFCEH 294

Query: 1028 LKSCADTGCLLEGFDRLSEIFRRAVLKLHKSKFTQFLIFYACSLDPDTCGLKFAILLTDI 1207
            LKSC + G L + FD L  IFR +VL++HKSKF QF++FYACSLDP+ CGL+FA+ L+DI
Sbjct: 295  LKSCKEHGRLPQEFDILKTIFRASVLRVHKSKFAQFIMFYACSLDPEICGLEFALFLSDI 354

Query: 1208 FVSKDEDPDSRMKAVAYLASYLSRAKFISSSLVTSILQRLVDWCFEYCQLQESREKMISP 1387
            F+ K+ED  SRM AV+Y+ SYLSRA+FIS+  V  IL+RLVDWC +YC LQ +      P
Sbjct: 355  FIKKEEDSISRMSAVSYVGSYLSRARFISADTVVGILKRLVDWCVDYCDLQNNIRITTKP 414

Query: 1388 QADRIFYSGCQAVMYILCFRLRSISDVPHLKQLLFHLPLDSILCHPTLDPLKVCLPLIVQ 1567
               +IFY+ CQAVMYILCFRLRSI D P+LK  LF++P   IL HP L+PLKVCLP IV 
Sbjct: 415  INHQIFYASCQAVMYILCFRLRSIMDYPNLKAQLFNMPFGYILTHP-LEPLKVCLPSIVD 473

Query: 1568 EFLRQASAARLFKKPMPYFYDNSLESEFSKAFGGIQRLDMFFPFDPYLLKESDRFMRPNF 1747
            EFLRQA AARLF   +   ++++LES+ SK FGG+ RLDMFFPFDPYLLKESDR+MRPNF
Sbjct: 474  EFLRQAKAARLFNASVHSEFEDALESDLSKTFGGMNRLDMFFPFDPYLLKESDRYMRPNF 533

Query: 1748 EFWDNVRTTYSNFD 1789
            E+W  V+TTY+N++
Sbjct: 534  EYWSMVKTTYNNYN 547


>gb|EEC81212.1| hypothetical protein OsI_24246 [Oryza sativa Indica Group]
          Length = 622

 Score =  587 bits (1512), Expect = e-165
 Identities = 311/554 (56%), Positives = 399/554 (72%), Gaps = 3/554 (0%)
 Frame = +2

Query: 137  MGVEPQGNGFSVDGAEEGFISDSEAFASVINVLDGVRMAPSLVAQVDKEQYYYLVSVVNP 316
            MG E + +   V  AEE  ISDS+AF  V +VL  VRM P  V   DKE+Y  L+S+V+ 
Sbjct: 1    MGAELRRDDMEV--AEED-ISDSQAFRFVEHVLQSVRMDPFQVDLRDKEEYDSLLSIVDS 57

Query: 317  GRKIGPVDEALTVTALKALTRAVFKIDIMYHGALLNNIFLTSIWDYDLETRNAFLELITT 496
             +K    DEAL VT LKAL+ AV KIDIMYH ALLNNIF  SIW  + +TR+A L LIT 
Sbjct: 58   SKKRSYDDEALLVTTLKALSEAVSKIDIMYHHALLNNIFTMSIWYLNSDTRDALLSLITR 117

Query: 497  MATLPDKFLENCLHVLLCNFRPPNWLKAPFCHSKRWLMRKKEVHSELHLALHCITTLVPL 676
            +A + D+FL  CL +L+ NF PP  L A F    RWL RKKE++S+LH +L  I+  VPL
Sbjct: 118  LAAVADQFLRECLQMLVNNFTPPGSLTA-FIGQPRWLARKKEIYSQLHESLRMISDTVPL 176

Query: 677  APVRLKCLIEKLMSRVTEDKYIMVTYVEGLLGLEKNEIGKFLGSTVMAKVVDLLTDLDVN 856
            AP  LK +I++ M ++ ++K  MV++VE +LGL+ + +G  +G+ ++AKVVDLLT+LDVN
Sbjct: 177  APRMLKDIIDRSMPKLFDNKAKMVSFVECMLGLDNDRMGDLIGALLLAKVVDLLTELDVN 236

Query: 857  IPWEDILQEEQNKSVFVIELGDSNQDDEHSSIKQNGVLKC---NVFADKLDGLMVVVCEH 1027
            I WEDILQ+E NK +F +EL D  +D++  S+ Q G       N  A+KLDGLMVV CEH
Sbjct: 237  ITWEDILQDEHNKGIFDMELEDLGEDED--SLGQEGTKALFGGNACAEKLDGLMVVFCEH 294

Query: 1028 LKSCADTGCLLEGFDRLSEIFRRAVLKLHKSKFTQFLIFYACSLDPDTCGLKFAILLTDI 1207
            LKSC + G L + FD L  IFR +VL++HKSKF QF++FYACSLDP+ CGL+FA+ L+DI
Sbjct: 295  LKSCKEHGRLPQEFDILKTIFRASVLRVHKSKFAQFIMFYACSLDPEICGLEFALFLSDI 354

Query: 1208 FVSKDEDPDSRMKAVAYLASYLSRAKFISSSLVTSILQRLVDWCFEYCQLQESREKMISP 1387
            F+ K+ED  SRM AV+Y+ SYLSRA+FIS+  V  IL+RLVDWC +YC LQ +      P
Sbjct: 355  FIKKEEDSISRMSAVSYVGSYLSRARFISADTVVGILKRLVDWCVDYCDLQNNIGITTKP 414

Query: 1388 QADRIFYSGCQAVMYILCFRLRSISDVPHLKQLLFHLPLDSILCHPTLDPLKVCLPLIVQ 1567
               +IFY+ CQAVMYILCFRLRSI D P+LK  LF++P   IL HP L+PLKVCLP IV 
Sbjct: 415  INHQIFYASCQAVMYILCFRLRSIMDYPNLKAQLFNMPFGYILTHP-LEPLKVCLPSIVD 473

Query: 1568 EFLRQASAARLFKKPMPYFYDNSLESEFSKAFGGIQRLDMFFPFDPYLLKESDRFMRPNF 1747
            EFLRQA AARLF   +   ++++LES+ SK FGG+ RLDMFFPFDPYLLKESDR+MRPNF
Sbjct: 474  EFLRQAKAARLFNASVHSEFEDALESDLSKTFGGMNRLDMFFPFDPYLLKESDRYMRPNF 533

Query: 1748 EFWDNVRTTYSNFD 1789
            E+W  V+TTY+N++
Sbjct: 534  EYWSMVKTTYNNYN 547


>ref|XP_006656405.1| PREDICTED: RNA polymerase I-specific transcription initiation factor
            RRN3-like isoform X1 [Oryza brachyantha]
          Length = 622

 Score =  583 bits (1503), Expect = e-164
 Identities = 303/554 (54%), Positives = 399/554 (72%), Gaps = 3/554 (0%)
 Frame = +2

Query: 137  MGVEPQGNGFSVDGAEEGFISDSEAFASVINVLDGVRMAPSLVAQVDKEQYYYLVSVVNP 316
            MG E + +   V+  EEG +SDS+AF  V +VL  VRM P LV   DK+QY  L+ +V+ 
Sbjct: 1    MGAELRPDDMEVE--EEG-VSDSQAFRFVEHVLQSVRMDPVLVDLKDKDQYDSLLKIVDS 57

Query: 317  GRKIGPVDEALTVTALKALTRAVFKIDIMYHGALLNNIFLTSIWDYDLETRNAFLELITT 496
             +K    DEAL V  LKAL+ AV KIDI YH  LL+NIF  ++W    +TR+A LELIT 
Sbjct: 58   SKKRSFDDEALLVPTLKALSEAVSKIDITYHHELLSNIFTMTLWYMQRDTRDALLELITR 117

Query: 497  MATLPDKFLENCLHVLLCNFRPPNWLKAPFCHSKRWLMRKKEVHSELHLALHCITTLVPL 676
            +A + D+FL  CL +L+ NF PP  L A F    RW  RKKE++S+LH +L  I+  +PL
Sbjct: 118  LAAVADQFLRECLQMLVNNFTPPGPLTA-FIGQPRWHARKKEIYSQLHESLRVISDTIPL 176

Query: 677  APVRLKCLIEKLMSRVTEDKYIMVTYVEGLLGLEKNEIGKFLGSTVMAKVVDLLTDLDVN 856
            AP  LK +I++ M ++ ++K   +++VE +LGL+ + +G  +GS ++AKVVDLLT+LDVN
Sbjct: 177  APRMLKDIIDRSMPKLFDNKAKTISFVECILGLDNDRMGDLIGSLLLAKVVDLLTELDVN 236

Query: 857  IPWEDILQEEQNKSVFVIELGDSNQDDEHSSIKQNGVLKC---NVFADKLDGLMVVVCEH 1027
            I WEDILQEE +K +F +EL D   DD+  S+ Q G       N  A+KLDGLMVV CEH
Sbjct: 237  ITWEDILQEEHHKGIFDMELEDL--DDDEDSLGQEGTKALFGGNACAEKLDGLMVVFCEH 294

Query: 1028 LKSCADTGCLLEGFDRLSEIFRRAVLKLHKSKFTQFLIFYACSLDPDTCGLKFAILLTDI 1207
            LK+C++ G LL+ FD L  IFR +VL +HKSKF QF++FYACSLDP+ CG++F++ LTDI
Sbjct: 295  LKACSEHGRLLKEFDILKTIFRTSVLTVHKSKFAQFIVFYACSLDPEICGIEFSLFLTDI 354

Query: 1208 FVSKDEDPDSRMKAVAYLASYLSRAKFISSSLVTSILQRLVDWCFEYCQLQESREKMISP 1387
            F+ K+ED  SRM AV+Y+ SYLSRA+FIS+  V ++L+RLVDWC +YC LQ ++  +  P
Sbjct: 355  FIKKEEDLLSRMSAVSYVGSYLSRARFISADTVVAVLKRLVDWCVDYCDLQNNKGIITKP 414

Query: 1388 QADRIFYSGCQAVMYILCFRLRSISDVPHLKQLLFHLPLDSILCHPTLDPLKVCLPLIVQ 1567
               +IFY+ CQAVMYILCFRLRSI D P+LK  LF++P   IL HP L+PLKVCLP+IV 
Sbjct: 415  INHQIFYASCQAVMYILCFRLRSIMDYPNLKSQLFNMPFGYILTHP-LEPLKVCLPVIVD 473

Query: 1568 EFLRQASAARLFKKPMPYFYDNSLESEFSKAFGGIQRLDMFFPFDPYLLKESDRFMRPNF 1747
            EFLRQA AARLF   M   ++++LES+ S+ FGGI RLDMFFPFDPYLLKESDR++RPNF
Sbjct: 474  EFLRQAKAARLFNASMSSAFEDALESDLSRTFGGIDRLDMFFPFDPYLLKESDRYIRPNF 533

Query: 1748 EFWDNVRTTYSNFD 1789
            EFW  V+TTYSN++
Sbjct: 534  EFWSRVKTTYSNYN 547


>ref|XP_003563455.1| PREDICTED: RNA polymerase I-specific transcription initiation factor
            RRN3-like [Brachypodium distachyon]
          Length = 622

 Score =  566 bits (1459), Expect = e-158
 Identities = 292/536 (54%), Positives = 386/536 (72%), Gaps = 3/536 (0%)
 Frame = +2

Query: 194  ISDSEAFASVINVLDGVRMAPSLVAQVDKEQYYYLVSVVNPGRKIGPVDEALTVTALKAL 373
            ISD+ AF  V +VL  V M P LV   D+EQY  L+++++  +K    DEAL VT LKAL
Sbjct: 17   ISDTAAFRMVEHVLQSVSMDPFLVDPSDREQYDILLNILDAVKKRSLDDEALLVTTLKAL 76

Query: 374  TRAVFKIDIMYHGALLNNIFLTSIWDYDLETRNAFLELITTMATLPDKFLENCLHVLLCN 553
            + AV KID+MYH  LLNNIF   IW +  +TR+A+L+LIT +A + DK+L  CL V++ N
Sbjct: 77   SEAVSKIDMMYHYILLNNIFGMCIWFFQRDTRDAYLDLITRLAAVADKYLRECLQVVVNN 136

Query: 554  FRPPNWLKAPFCHSKRWLMRKKEVHSELHLALHCITTLVPLAPVRLKCLIEKLMSRVTED 733
            F PP  L  P+    RW+ RKKE++ +LH  L  I+  VPLAP  LK +I++ M ++ ++
Sbjct: 137  FTPPGPL-VPYMEQPRWIARKKEIYFQLHECLKTISDTVPLAPRMLKDIIDRSMPKLFDN 195

Query: 734  KYIMVTYVEGLLGLEKNEIGKFLGSTVMAKVVDLLTDLDVNIPWEDILQEEQNKSVFVIE 913
            K  MV++VE ++GL+ + +G  +G+ ++AKVVDLLT+LDVNI  EDI QEE NK +F +E
Sbjct: 196  KAKMVSFVECMMGLDTDRMGDLIGALLLAKVVDLLTELDVNITLEDINQEEHNKGIFDME 255

Query: 914  LGDSNQDDEHSSIKQNG---VLKCNVFADKLDGLMVVVCEHLKSCADTGCLLEGFDRLSE 1084
            L D ++D++     Q G   +L  N  A+KLDGLMVVVCEHLKSCA+ G L + FD L  
Sbjct: 256  LEDLDEDED--GFGQEGTKVLLGGNACAEKLDGLMVVVCEHLKSCAEHGYLTKEFDTLKT 313

Query: 1085 IFRRAVLKLHKSKFTQFLIFYACSLDPDTCGLKFAILLTDIFVSKDEDPDSRMKAVAYLA 1264
            IFR ++L++HKSKF QF++FYACSLDP+ CGL+FAI LTD F  K+EDP SRM AV+Y+ 
Sbjct: 314  IFRASLLRVHKSKFAQFIMFYACSLDPEICGLEFAIFLTDTFTKKEEDPISRMSAVSYVG 373

Query: 1265 SYLSRAKFISSSLVTSILQRLVDWCFEYCQLQESREKMISPQADRIFYSGCQAVMYILCF 1444
            SYLSRA+FIS+  V  IL+RLV+WC EYC LQ  R  +  P   +IFY+ CQAVMY+LCF
Sbjct: 374  SYLSRARFISADTVVGILKRLVEWCVEYCDLQNKRGTIAKPN-HQIFYATCQAVMYVLCF 432

Query: 1445 RLRSISDVPHLKQLLFHLPLDSILCHPTLDPLKVCLPLIVQEFLRQASAARLFKKPMPYF 1624
            RLRSI D P+LK  LFH+P   +L HP L+PLKVCLP IV EFLRQA  A LF   +   
Sbjct: 433  RLRSIMDYPNLKSELFHMPFGFLLTHP-LEPLKVCLPSIVNEFLRQAKPAGLFTAFVDPA 491

Query: 1625 YDNSLESEFSKAFGGIQRLDMFFPFDPYLLKESDRFMRPNFEFWDNVRTTYSNFDG 1792
            +++++ES+ S+ FGG+ RLD+FFPFDPYLLKESDR++RPNFE+W  V+TTYSN +G
Sbjct: 492  FEDAIESDLSRTFGGVNRLDVFFPFDPYLLKESDRYIRPNFEYWSMVKTTYSNDNG 547


>ref|XP_006656406.1| PREDICTED: RNA polymerase I-specific transcription initiation factor
            RRN3-like isoform X2 [Oryza brachyantha]
          Length = 597

 Score =  561 bits (1446), Expect = e-157
 Identities = 285/515 (55%), Positives = 375/515 (72%), Gaps = 3/515 (0%)
 Frame = +2

Query: 254  PSLVAQVDKEQYYYLVSVVNPGRKIGPVDEALTVTALKALTRAVFKIDIMYHGALLNNIF 433
            P LV   DK+QY  L+ +V+  +K    DEAL V  LKAL+ AV KIDI YH  LL+NIF
Sbjct: 12   PVLVDLKDKDQYDSLLKIVDSSKKRSFDDEALLVPTLKALSEAVSKIDITYHHELLSNIF 71

Query: 434  LTSIWDYDLETRNAFLELITTMATLPDKFLENCLHVLLCNFRPPNWLKAPFCHSKRWLMR 613
              ++W    +TR+A LELIT +A + D+FL  CL +L+ NF PP  L A F    RW  R
Sbjct: 72   TMTLWYMQRDTRDALLELITRLAAVADQFLRECLQMLVNNFTPPGPLTA-FIGQPRWHAR 130

Query: 614  KKEVHSELHLALHCITTLVPLAPVRLKCLIEKLMSRVTEDKYIMVTYVEGLLGLEKNEIG 793
            KKE++S+LH +L  I+  +PLAP  LK +I++ M ++ ++K   +++VE +LGL+ + +G
Sbjct: 131  KKEIYSQLHESLRVISDTIPLAPRMLKDIIDRSMPKLFDNKAKTISFVECILGLDNDRMG 190

Query: 794  KFLGSTVMAKVVDLLTDLDVNIPWEDILQEEQNKSVFVIELGDSNQDDEHSSIKQNGVLK 973
              +GS ++AKVVDLLT+LDVNI WEDILQEE +K +F +EL D   DD+  S+ Q G   
Sbjct: 191  DLIGSLLLAKVVDLLTELDVNITWEDILQEEHHKGIFDMELEDL--DDDEDSLGQEGTKA 248

Query: 974  C---NVFADKLDGLMVVVCEHLKSCADTGCLLEGFDRLSEIFRRAVLKLHKSKFTQFLIF 1144
                N  A+KLDGLMVV CEHLK+C++ G LL+ FD L  IFR +VL +HKSKF QF++F
Sbjct: 249  LFGGNACAEKLDGLMVVFCEHLKACSEHGRLLKEFDILKTIFRTSVLTVHKSKFAQFIVF 308

Query: 1145 YACSLDPDTCGLKFAILLTDIFVSKDEDPDSRMKAVAYLASYLSRAKFISSSLVTSILQR 1324
            YACSLDP+ CG++F++ LTDIF+ K+ED  SRM AV+Y+ SYLSRA+FIS+  V ++L+R
Sbjct: 309  YACSLDPEICGIEFSLFLTDIFIKKEEDLLSRMSAVSYVGSYLSRARFISADTVVAVLKR 368

Query: 1325 LVDWCFEYCQLQESREKMISPQADRIFYSGCQAVMYILCFRLRSISDVPHLKQLLFHLPL 1504
            LVDWC +YC LQ ++  +  P   +IFY+ CQAVMYILCFRLRSI D P+LK  LF++P 
Sbjct: 369  LVDWCVDYCDLQNNKGIITKPINHQIFYASCQAVMYILCFRLRSIMDYPNLKSQLFNMPF 428

Query: 1505 DSILCHPTLDPLKVCLPLIVQEFLRQASAARLFKKPMPYFYDNSLESEFSKAFGGIQRLD 1684
              IL HP L+PLKVCLP+IV EFLRQA AARLF   M   ++++LES+ S+ FGGI RLD
Sbjct: 429  GYILTHP-LEPLKVCLPVIVDEFLRQAKAARLFNASMSSAFEDALESDLSRTFGGIDRLD 487

Query: 1685 MFFPFDPYLLKESDRFMRPNFEFWDNVRTTYSNFD 1789
            MFFPFDPYLLKESDR++RPNFEFW  V+TTYSN++
Sbjct: 488  MFFPFDPYLLKESDRYIRPNFEFWSRVKTTYSNYN 522


>ref|XP_004966190.1| PREDICTED: RNA polymerase I-specific transcription initiation factor
            RRN3-like isoform X2 [Setaria italica]
          Length = 618

 Score =  543 bits (1398), Expect = e-151
 Identities = 283/533 (53%), Positives = 378/533 (70%), Gaps = 4/533 (0%)
 Frame = +2

Query: 197  SDSEAFASVINVLDGVRMAPSLVAQVDKEQYYYLVSVVNPGRKIGPVDEALTVTALKALT 376
            SDS  F  V +VL  VRM P L+   DK+ Y +L+  V+P +K    + A+ VT LKAL+
Sbjct: 15   SDSHMFRQVQHVLQSVRMDPFLIDLRDKDHYDFLLLAVDPTKKRSKDEMAVLVTILKALS 74

Query: 377  RAVFKIDIMYHGALLNNIFLTSIWDYDLETRNAFLELITTMATLPDKFLENCLHVLLCNF 556
             AV KID+MYH ALL+NIF T IW  DL+TR+A L LIT +A + D++L  CL +L+ NF
Sbjct: 75   EAVSKIDVMYHHALLHNIFTTCIWYLDLDTRDALLHLITRLAAVADQYLRECLQMLVNNF 134

Query: 557  RPPNWLKAPFCHSKRWLMRKKEVHSELHLALHCITTLVPLAPVRLKCLIEKLMSRVTEDK 736
             PP     P     R L +KKE++S+LH  L  I+  VPLA   LK ++ + M ++ ++K
Sbjct: 135  TPPGPY-VPLMEQPRMLAKKKEIYSQLHETLKMISDTVPLASRMLKDVLNRSMPKLFDNK 193

Query: 737  YIMVTYVEGLLGLEKNEIGKFLGSTVMAKVVDLLTDLDVNIPWEDILQEEQNKSVFVIEL 916
              M+++VE +LGL+ + +G  +G+T+  KVVDLLT+LDVNI WEDILQEE NK +F +EL
Sbjct: 194  AKMLSFVECMLGLDTDRLGDLIGTTLFEKVVDLLTELDVNITWEDILQEEHNKGIFDMEL 253

Query: 917  GDSNQDDEHSSIKQNGVL-KCNVFADKLDGLMVVVCEHLKSCADTGCLLEGFDRLSEIFR 1093
             D + DD++   +    L   NV A+KLDGLMVVVCEHLKSC +   L + F  L  IFR
Sbjct: 254  EDLDDDDDNFGQEGTKALFGGNVCAEKLDGLMVVVCEHLKSC-NRDRLFKEFGILKTIFR 312

Query: 1094 RAVLKLHKSKFTQFLIFYACSLDPDTCGLKFAILLTDIFVSKDEDPDSRMKAVAYLASYL 1273
            ++VLK+HKSKF QF++FYACSLDP+ CG+ FA+ LTDIF  K++DP +RM AV+Y+ SYL
Sbjct: 313  KSVLKVHKSKFAQFIMFYACSLDPEICGVDFALFLTDIFTKKEDDPIARMSAVSYVGSYL 372

Query: 1274 SRAKFISSSLVTSILQRLVDWCFEYCQLQE---SREKMISPQADRIFYSGCQAVMYILCF 1444
            SRA+FIS+  V ++L+RLV+WC +Y +      ++ K   P+  +IFY+ CQAVMY+LCF
Sbjct: 373  SRARFISADTVVAVLKRLVEWCIDYIKRDRDPVNQAKATKPKDHQIFYASCQAVMYVLCF 432

Query: 1445 RLRSISDVPHLKQLLFHLPLDSILCHPTLDPLKVCLPLIVQEFLRQASAARLFKKPMPYF 1624
            RLRSI D P+LK  LF +P++SIL   TL+PLKVCLP IV EFLRQ+ AARLF   +   
Sbjct: 433  RLRSIMDYPNLKSQLFQMPIESILM-DTLEPLKVCLPSIVNEFLRQSRAARLFNASVDLP 491

Query: 1625 YDNSLESEFSKAFGGIQRLDMFFPFDPYLLKESDRFMRPNFEFWDNVRTTYSN 1783
             ++ +ES+ SKAFGG  RLDMFFPFDPYLL+ESDR++RPNFEFW  V+TTYS+
Sbjct: 492  LEDIVESDLSKAFGGPNRLDMFFPFDPYLLRESDRYIRPNFEFWSLVKTTYSD 544


>ref|XP_004966189.1| PREDICTED: RNA polymerase I-specific transcription initiation factor
            RRN3-like isoform X1 [Setaria italica]
          Length = 644

 Score =  528 bits (1361), Expect = e-147
 Identities = 283/559 (50%), Positives = 378/559 (67%), Gaps = 30/559 (5%)
 Frame = +2

Query: 197  SDSEAFASVINVLDGVRMAPSLVAQVDKEQYYYLVSVVNPGRKIGPVDEALTVTALKALT 376
            SDS  F  V +VL  VRM P L+   DK+ Y +L+  V+P +K    + A+ VT LKAL+
Sbjct: 15   SDSHMFRQVQHVLQSVRMDPFLIDLRDKDHYDFLLLAVDPTKKRSKDEMAVLVTILKALS 74

Query: 377  RAVFKIDIMYHGALLNNIFLTSIWDYDLETRNAFLELITTMATLPDKFLENCLHVLLCNF 556
             AV KID+MYH ALL+NIF T IW  DL+TR+A L LIT +A + D++L  CL +L+ NF
Sbjct: 75   EAVSKIDVMYHHALLHNIFTTCIWYLDLDTRDALLHLITRLAAVADQYLRECLQMLVNNF 134

Query: 557  RPPNWLKAPFCHSKRWLMRKKEVHSELHLALHCITTLVPLAPVRLKCLIEKLMSRVTEDK 736
             PP     P     R L +KKE++S+LH  L  I+  VPLA   LK ++ + M ++ ++K
Sbjct: 135  TPPGPY-VPLMEQPRMLAKKKEIYSQLHETLKMISDTVPLASRMLKDVLNRSMPKLFDNK 193

Query: 737  YIMVTYVEGLLGLEKNEIGKFLGSTVMAKVVDLLTDLDVNIPWEDILQEEQNKSVFVIEL 916
              M+++VE +LGL+ + +G  +G+T+  KVVDLLT+LDVNI WEDILQEE NK +F +EL
Sbjct: 194  AKMLSFVECMLGLDTDRLGDLIGTTLFEKVVDLLTELDVNITWEDILQEEHNKGIFDMEL 253

Query: 917  GDSNQDDEHSSIKQNGVL-KCNVFADKLDGLMVVVCEHLKSCADTGCLLEGFDRLSEIFR 1093
             D + DD++   +    L   NV A+KLDGLMVVVCEHLKSC +   L + F  L  IFR
Sbjct: 254  EDLDDDDDNFGQEGTKALFGGNVCAEKLDGLMVVVCEHLKSC-NRDRLFKEFGILKTIFR 312

Query: 1094 RAVLKLHKSKFTQFLIFYACSLDPDTCGLKFAILLTDIFVSKDEDPDSRMKAVAYLASYL 1273
            ++VLK+HKSKF QF++FYACSLDP+ CG+ FA+ LTDIF  K++DP +RM AV+Y+ SYL
Sbjct: 313  KSVLKVHKSKFAQFIMFYACSLDPEICGVDFALFLTDIFTKKEDDPIARMSAVSYVGSYL 372

Query: 1274 SRAKFISSSLVTSILQR--------------------------LVDWCFEYCQLQE---S 1366
            SRA+FIS+  V ++L+R                          LV+WC +Y +      +
Sbjct: 373  SRARFISADTVVAVLKRWLHSEHRLCMFYAFIHLRFMFYLLHRLVEWCIDYIKRDRDPVN 432

Query: 1367 REKMISPQADRIFYSGCQAVMYILCFRLRSISDVPHLKQLLFHLPLDSILCHPTLDPLKV 1546
            + K   P+  +IFY+ CQAVMY+LCFRLRSI D P+LK  LF +P++SIL   TL+PLKV
Sbjct: 433  QAKATKPKDHQIFYASCQAVMYVLCFRLRSIMDYPNLKSQLFQMPIESILMD-TLEPLKV 491

Query: 1547 CLPLIVQEFLRQASAARLFKKPMPYFYDNSLESEFSKAFGGIQRLDMFFPFDPYLLKESD 1726
            CLP IV EFLRQ+ AARLF   +    ++ +ES+ SKAFGG  RLDMFFPFDPYLL+ESD
Sbjct: 492  CLPSIVNEFLRQSRAARLFNASVDLPLEDIVESDLSKAFGGPNRLDMFFPFDPYLLRESD 551

Query: 1727 RFMRPNFEFWDNVRTTYSN 1783
            R++RPNFEFW  V+TTYS+
Sbjct: 552  RYIRPNFEFWSLVKTTYSD 570


>gb|AFW69236.1| hypothetical protein ZEAMMB73_457339 [Zea mays]
          Length = 620

 Score =  513 bits (1320), Expect = e-142
 Identities = 282/581 (48%), Positives = 389/581 (66%), Gaps = 10/581 (1%)
 Frame = +2

Query: 176  GAEEGF------ISDSEAFASVINVLDGVRMAPSLVAQVDKEQYYYLVSVVNPGRKIGPV 337
            GAE+G+        DSE F  V  VL  VRM P L+   DK+ Y Y++ +++P +K    
Sbjct: 2    GAEQGYEDMQGTFRDSEVFEFVGKVLQSVRMDPFLIDIRDKDYYDYMLGIIDPTKKRSTD 61

Query: 338  DEALTVTALKALTRAVFKIDIMYHGALLNNIFLTSIWDYDLETRNAFLELITTMATLPDK 517
            DEA+ VT L+AL++AV KID +YH ALL+NIF   +W    +TR  FL+LIT +A + D+
Sbjct: 62   DEAMFVTILRALSQAVSKIDTVYHHALLHNIFTMCVWHLHSDTRVVFLDLITRLAAVADQ 121

Query: 518  FLENCLHVLLCNFRPPNWLKAPFCHSKRWLMRKKEVHSELHLALHCITTLVPLAPVRLKC 697
            +L  CL +L+ NF PP  L   +    RWL +K++++S+L  +L  I+  VPLAP  LK 
Sbjct: 122  YLRECLQMLVNNFTPPGPL-IRYIEEPRWLPKKEKIYSQLQESLKMISDTVPLAPRMLKD 180

Query: 698  LIEKLMSRVTEDKYIMVTYVEGLLGLEKNEIGKFLGSTVMAKVVDLLTDLDVNIPWEDIL 877
            +I++ M ++ + K  MV++V+ +LGL+   +   +GS+++ KVV LLT+LDVNI WEDIL
Sbjct: 181  IIDRSMPKLFDSKAKMVSFVKCMLGLDA-VVWDIIGSSLLEKVVYLLTELDVNITWEDIL 239

Query: 878  QEEQNKSVFVIELGDSNQDDEHSSIKQNGV-LKCNVFADKLDGLMVVVCEHLKS-CADTG 1051
            Q+E NK +F +EL D  +D+++   +   V    N+ A+KLDGLMVVVCEHLKS   +  
Sbjct: 240  QDEHNKGIFDMELEDLAEDEDNLGQEGTKVHFGGNMCAEKLDGLMVVVCEHLKSRVEEPE 299

Query: 1052 CLLEGFDRLSEIFRRAVLKLHKSKFTQFLIFYACSLDPDTCGLKFAILLTDIFVSKDEDP 1231
             L++ F  L  IF+  VL++HKSKF QF++FYACSL P+  G  FA  LTDIF+ KD++ 
Sbjct: 300  RLIKEFVTLKAIFKSHVLRVHKSKFAQFIMFYACSLHPEI-GDGFANFLTDIFIDKDKNE 358

Query: 1232 DS--RMKAVAYLASYLSRAKFISSSLVTSILQRLVDWCFEYCQLQESREKMISPQADRIF 1405
            D+  R+ AV+Y+ SYLSRA+FIS ++V S+L+RLVDWC  YC  Q       +P   ++F
Sbjct: 359  DAITRVSAVSYVGSYLSRARFISVNIVVSVLKRLVDWCDYYCGHQLDNGVTANPIKHQLF 418

Query: 1406 YSGCQAVMYILCFRLRSISDVPHLKQLLFHLPLDSILCHPTLDPLKVCLPLIVQEFLRQA 1585
            Y+ CQAVMY+LCFRLRSI D P+LKQ LF + +  IL HP L PLKVCLP IV EFLRQA
Sbjct: 419  YASCQAVMYVLCFRLRSIMDYPNLKQQLFRMRIRDILVHP-LQPLKVCLPSIVNEFLRQA 477

Query: 1586 SAARLFKKPMPYFYDNSLESEFSKAFGGIQRLDMFFPFDPYLLKESDRFMRPNFEFWDNV 1765
            +AA LF  P    +++++ES+ SKAFGG+ RLDMFFPFDPYLLKESDR++RPNFEFW  V
Sbjct: 478  TAASLFHAPAISMHEDAVESDLSKAFGGLNRLDMFFPFDPYLLKESDRYIRPNFEFWSLV 537

Query: 1766 RTTYSNFDGXXXXXXXXXXXXPNFPDDAGGYEVHNDIDFDN 1888
            +TTYSN +             P    + G  + H +IDF++
Sbjct: 538  KTTYSNDNSDEDDEELGDIDAPGM--NVGSLDDHFEIDFNS 576


>gb|AFW69235.1| hypothetical protein ZEAMMB73_457339 [Zea mays]
          Length = 592

 Score =  471 bits (1213), Expect = e-130
 Identities = 266/579 (45%), Positives = 366/579 (63%), Gaps = 8/579 (1%)
 Frame = +2

Query: 176  GAEEGF------ISDSEAFASVINVLDGVRMAPSLVAQVDKEQYYYLVSVVNPGRKIGPV 337
            GAE+G+        DSE F  V  VL  VRM P L+   DK+ Y Y++ +++P +K    
Sbjct: 2    GAEQGYEDMQGTFRDSEVFEFVGKVLQSVRMDPFLIDIRDKDYYDYMLGIIDPTKKRSTD 61

Query: 338  DEALTVTALKALTRAVFKIDIMYHGALLNNIFLTSIWDYDLETRNAFLELITTMATLPDK 517
            DEA+ VT L+AL++AV KID +YH ALL+NIF   +W    +TR  FL+LIT +A + D+
Sbjct: 62   DEAMFVTILRALSQAVSKIDTVYHHALLHNIFTMCVWHLHSDTRVVFLDLITRLAAVADQ 121

Query: 518  FLENCLHVLLCNFRPPNWLKAPFCHSKRWLMRKKEVHSELHLALHCITTLVPLAPVRLKC 697
            +L  CL +L+ NF PP  L   +    RWL +K++++S+L  +L  I+  VPLAP  LK 
Sbjct: 122  YLRECLQMLVNNFTPPGPL-IRYIEEPRWLPKKEKIYSQLQESLKMISDTVPLAPRMLKD 180

Query: 698  LIEKLMSRVTEDKYIMVTYVEGLLGLEKNEIGKFLGSTVMAKVVDLLTDLDVNIPWEDIL 877
            +I++ M ++ + K  MV++V+ +LGL+   +   +GS+++ KVV LLT+LDVNI WEDIL
Sbjct: 181  IIDRSMPKLFDSKAKMVSFVKCMLGLDA-VVWDIIGSSLLEKVVYLLTELDVNITWEDIL 239

Query: 878  QEEQNKSVFVIELGDSNQDDEHSSIKQNGV-LKCNVFADKLDGLMVVVCEHLKS-CADTG 1051
            Q+E NK +F +EL D  +D+++   +   V    N+ A+KLDGLMVVVCEHLKS   +  
Sbjct: 240  QDEHNKGIFDMELEDLAEDEDNLGQEGTKVHFGGNMCAEKLDGLMVVVCEHLKSRVEEPE 299

Query: 1052 CLLEGFDRLSEIFRRAVLKLHKSKFTQFLIFYACSLDPDTCGLKFAILLTDIFVSKDEDP 1231
             L++ F  L  IF+  VL++HKSKF QF++FYACSL P+  G  FA  LTDIF+ KD++ 
Sbjct: 300  RLIKEFVTLKAIFKSHVLRVHKSKFAQFIMFYACSLHPEI-GDGFANFLTDIFIDKDKNE 358

Query: 1232 DSRMKAVAYLASYLSRAKFISSSLVTSILQRLVDWCFEYCQLQESREKMISPQADRIFYS 1411
            D+                          + RLVDWC  YC  Q       +P   ++FY+
Sbjct: 359  DA--------------------------ITRLVDWCDYYCGHQLDNGVTANPIKHQLFYA 392

Query: 1412 GCQAVMYILCFRLRSISDVPHLKQLLFHLPLDSILCHPTLDPLKVCLPLIVQEFLRQASA 1591
             CQAVMY+LCFRLRSI D P+LKQ LF + +  IL HP L PLKVCLP IV EFLRQA+A
Sbjct: 393  SCQAVMYVLCFRLRSIMDYPNLKQQLFRMRIRDILVHP-LQPLKVCLPSIVNEFLRQATA 451

Query: 1592 ARLFKKPMPYFYDNSLESEFSKAFGGIQRLDMFFPFDPYLLKESDRFMRPNFEFWDNVRT 1771
            A LF  P    +++++ES+ SKAFGG+ RLDMFFPFDPYLLKESDR++RPNFEFW  V+T
Sbjct: 452  ASLFHAPAISMHEDAVESDLSKAFGGLNRLDMFFPFDPYLLKESDRYIRPNFEFWSLVKT 511

Query: 1772 TYSNFDGXXXXXXXXXXXXPNFPDDAGGYEVHNDIDFDN 1888
            TYSN +             P    + G  + H +IDF++
Sbjct: 512  TYSNDNSDEDDEELGDIDAPGM--NVGSLDDHFEIDFNS 548


>ref|XP_002437492.1| hypothetical protein SORBIDRAFT_10g028030 [Sorghum bicolor]
            gi|241915715|gb|EER88859.1| hypothetical protein
            SORBIDRAFT_10g028030 [Sorghum bicolor]
          Length = 593

 Score =  470 bits (1209), Expect = e-129
 Identities = 262/579 (45%), Positives = 365/579 (63%), Gaps = 8/579 (1%)
 Frame = +2

Query: 176  GAEEGF------ISDSEAFASVINVLDGVRMAPSLVAQVDKEQYYYLVSVVNPGRKIGPV 337
            GAE+G+      + DS+ F  ++ VL  VRM P L+    K QY +L+ +V+P +K    
Sbjct: 2    GAEQGYDDMEVTLRDSDVFNYIVEVLQNVRMDPFLIDLRYKSQYDFLLDLVDPTKKRTSD 61

Query: 338  DEALTVTALKALTRAVFKIDIMYHGALLNNIFLTSIWDYDLETRNAFLELITTMATLPDK 517
            +EA+  T L+AL+ AV  ID MYH ALL+NIF   +W  +  TR   L+LIT +A + D+
Sbjct: 62   EEAMFATTLEALSEAVSTIDTMYHHALLHNIFTMCVWYLNSYTRVVLLDLITRLAAVADQ 121

Query: 518  FLENCLHVLLCNFRPPNWLKAPFCHSKRWLMRKKEVHSELHLALHCITTLVPLAPVRLKC 697
            +L  CL +L+ NF PP  L   +    RWL +K+E++S+L  +L  I+  VPLAP  LK 
Sbjct: 122  YLRECLQMLVNNFTPPGPL-IRYIEEPRWLAKKEEIYSQLQESLKKISDTVPLAPRMLKD 180

Query: 698  LIEKLMSRVTEDKYIMVTYVEGLLGLEKNEIGKFLGSTVMAKVVDLLTDLDVNIPWEDIL 877
            +I++ M ++ + K  MV++VE +LGL+  +    +G +++ KVV LLT+LDVNI WEDIL
Sbjct: 181  IIDRSMPKLFDSKAKMVSFVECMLGLDA-DTWDIIGPSLLEKVVYLLTELDVNITWEDIL 239

Query: 878  QEEQNKSVFVIELGDSNQDDEHSSIKQNGVL-KCNVFADKLDGLMVVVCEHLKSCADTGC 1054
            Q+E NK +F +EL D ++D+++   +   VL   NV A+KLDGLMVVVC+HLKS A+   
Sbjct: 240  QDEHNKGIFDMELEDLDEDEDNLGQEGTKVLFGGNVCAEKLDGLMVVVCKHLKSRAEEPD 299

Query: 1055 LL-EGFDRLSEIFRRAVLKLHKSKFTQFLIFYACSLDPDTCGLKFAILLTDIFVSKDEDP 1231
             L + FD L  IF+  V+++HKSKF QF++FYACSL P  CG  FA  L DIF+ KD+  
Sbjct: 300  RLNKEFDTLKAIFKSHVIRVHKSKFAQFIMFYACSLYPKICGEGFAFFLVDIFIDKDKKE 359

Query: 1232 DSRMKAVAYLASYLSRAKFISSSLVTSILQRLVDWCFEYCQLQESREKMISPQADRIFYS 1411
            D+                          + RLV+WC +YC  Q  +    +P   ++FY+
Sbjct: 360  DA--------------------------ITRLVEWCGDYCGSQLDKGVTANPIKHQLFYA 393

Query: 1412 GCQAVMYILCFRLRSISDVPHLKQLLFHLPLDSILCHPTLDPLKVCLPLIVQEFLRQASA 1591
             CQAVMY+LCFRLRSI D P+LK  LF + + +IL HP L+PLKVCLP IV EFLRQA +
Sbjct: 394  SCQAVMYVLCFRLRSIMDYPNLKLQLFQMRIQNILAHP-LEPLKVCLPSIVNEFLRQARS 452

Query: 1592 ARLFKKPMPYFYDNSLESEFSKAFGGIQRLDMFFPFDPYLLKESDRFMRPNFEFWDNVRT 1771
            A LF   +   +++++ES+ SKAFGG+ RLDMFFPFDPYLLKESDR++RPNFEFW  V+T
Sbjct: 453  ASLFHASVNSTHEDAVESDLSKAFGGLNRLDMFFPFDPYLLKESDRYIRPNFEFWSLVKT 512

Query: 1772 TYSNFDGXXXXXXXXXXXXPNFPDDAGGYEVHNDIDFDN 1888
            TYSN +             P    + G  + H +IDF+N
Sbjct: 513  TYSNNNSDEDNDELADIDAPGM--NVGSLDDHFEIDFNN 549


>gb|EMT22842.1| hypothetical protein F775_01666 [Aegilops tauschii]
          Length = 604

 Score =  459 bits (1182), Expect = e-126
 Identities = 267/533 (50%), Positives = 345/533 (64%), Gaps = 3/533 (0%)
 Frame = +2

Query: 194  ISDSEAFASVINVLDGVRMAPSLVAQVDKEQYYYLVSVVNPGRKIGPVDEALTVTALKAL 373
            I DS AF  V +VL  VRM P LV   D +QY  +VS ++  +K  P +EAL VT LKAL
Sbjct: 18   IRDSVAFRFVEHVLQSVRMDPLLVDPYDMDQYNKMVSTLDTSKKKTPDEEALYVTTLKAL 77

Query: 374  TRAVFKIDIMYHGALLNNIFLTSIWDYDLETRNAFLELITTMATLPDKFLENCLHVLLCN 553
            + AV KIDI YH  LLNN                        A + D++L  CL +L+ N
Sbjct: 78   SEAVSKIDITYHHLLLNN------------------------AAVADQYLRECLQMLVNN 113

Query: 554  FRPPNWLKAPFCHSKRWLM-RKKEVHSELHLALHCITTLVPLAPVRLKCLIEKLMSRVTE 730
            F PP   +       RW + RKK++   L  +L  I+  VPLAP  L+ +I++ M ++ +
Sbjct: 114  FTPPLVQRNEL---PRWAVSRKKDIFFHLCESLKTISDTVPLAPRILRDIIDRSMPKLFD 170

Query: 731  DKYIMVTYVEGLLGLEKNEIGKFLGSTVMAKVVDLLTDLDVNIPWEDILQEEQNKSVFVI 910
            +K  MV++VE +LGL+ + +G  +G+T++AKVVDLLT+LDVNI WEDI+Q E NK +F +
Sbjct: 171  NKAKMVSFVECMLGLDTDRMGDLIGATLLAKVVDLLTELDVNITWEDIIQGEHNKGIFEM 230

Query: 911  ELGDSNQDDEHSSIKQNGVL-KCNVFADKLDGLMVVVCEHLKSCADTGCLLEGFDRLSEI 1087
            EL D N+D++        VL   N  A+KLD LMVVVCEHLKSCA+ G L + FD L  I
Sbjct: 231  ELEDLNEDEDGLGQAGTKVLFGGNACAEKLDSLMVVVCEHLKSCAERGYLDKEFDILKAI 290

Query: 1088 FRRAVLKLHKSKFTQFLIFYACSLDPDTCGLKFAILLTDIFVSKDEDPDSRMKAVAYLAS 1267
            FR +VL++H+SKF QF++FYACSLDP  CGL+FA  LT+IF++K+EDP SRM AV+Y+ S
Sbjct: 291  FRASVLRVHRSKFCQFIMFYACSLDPKICGLEFAFFLTEIFLNKEEDPISRMSAVSYVGS 350

Query: 1268 YLSRAKFISSSLVTSILQRLVDWCFEYCQLQESREKMISP-QADRIFYSGCQAVMYILCF 1444
            YLSRA+FIS+  V +IL++      E  QL    +    P     IF     AVMY+LCF
Sbjct: 351  YLSRARFISADTVLAILKKT-----EGPQLIRIIKYFTGPVSVGSIFGITFSAVMYVLCF 405

Query: 1445 RLRSISDVPHLKQLLFHLPLDSILCHPTLDPLKVCLPLIVQEFLRQASAARLFKKPMPYF 1624
            RLRSI D P+LK  LF L    IL H  L+PLKVCLP IV EFLRQA  A LF   M   
Sbjct: 406  RLRSIMDYPNLKAQLFQLSFGFILNH-RLEPLKVCLPSIVNEFLRQAKDAGLFAASMYSA 464

Query: 1625 YDNSLESEFSKAFGGIQRLDMFFPFDPYLLKESDRFMRPNFEFWDNVRTTYSN 1783
             ++++ES+ S+AFGGI RLD FFPFDPYLLKESDR++RPNFEFW  V+TTYSN
Sbjct: 465  AEDAIESDLSRAFGGINRLDTFFPFDPYLLKESDRYIRPNFEFWSMVKTTYSN 517


>emb|CBI37506.3| unnamed protein product [Vitis vinifera]
          Length = 607

 Score =  459 bits (1182), Expect = e-126
 Identities = 254/558 (45%), Positives = 354/558 (63%), Gaps = 9/558 (1%)
 Frame = +2

Query: 137  MGVEPQGNGFSVDGAEEGFISDSEAFASVINVLDGVRMAPSLVAQVDKEQYYYLVSVVNP 316
            MGVE   +       EE   SDSE    V + L  V +        D + Y  L+ V++ 
Sbjct: 1    MGVELATDRAGFHEMEEVNFSDSELVYHVRHALQSVPLG-------DSDSYDQLIGVLHH 53

Query: 317  GRKIGPVDEALTVTALKALTRAVFKIDIMYHGALLNNIFLTSIWDYDLETRNAFLELITT 496
              ++ P + AL VT+LKAL+ AV  ID+++H +LL++IF  S+W+Y  +  +A LELI +
Sbjct: 54   KERLAPDEVALLVTSLKALSGAVSCIDMVHHKSLLSSIFGMSLWNYGPDVMDALLELILS 113

Query: 497  MATLPDKFLENCLHVLLCNFRPPNWLKAPFCHSKRWLMRKKEVHSELHLALHCITTLVPL 676
            +A     +L+  L +L+ NF PP  L   F    R L RK +V S +H  L  I  LVPL
Sbjct: 114  LAASSGNYLDCSLDMLVSNFMPPYSL-LDFLKQPRGLARKDQVLSRVHSTLKDIADLVPL 172

Query: 677  APVRLKCLIEKLMSRVTEDKYIMVTYVEGLLGLEKNEIGKFLGSTVMAKVVDLLTDLDVN 856
            AP RL  ++ + M  V   + +++ YVE +L LE   I + +G+ ++  ++D L DLDV 
Sbjct: 173  APSRLVPIVIQRMPNVFTKEPLIMIYVENMLRLEGGAIRELVGNMMLVALMDRLVDLDVE 232

Query: 857  IPWEDILQEEQNKSVFVIELGDSNQDDE---------HSSIKQNGVLKCNVFADKLDGLM 1009
            I WE++LQ++ +K +F +EL D  +  +         H        L  N+ A+KLD LM
Sbjct: 233  IAWEEVLQDDCSKGIFEMELEDMEEPADDVENDGGELHRGSLSRKSLGGNLIAEKLDSLM 292

Query: 1010 VVVCEHLKSCADTGCLLEGFDRLSEIFRRAVLKLHKSKFTQFLIFYACSLDPDTCGLKFA 1189
            V+  EHL+SC   G L+E F+ L   F+  VL   KSKF QF++FYAC+LDP+ CG++FA
Sbjct: 293  VLTFEHLESCEAGGRLIEVFETLVLSFQTTVLNAFKSKFAQFVMFYACALDPENCGVRFA 352

Query: 1190 ILLTDIFVSKDEDPDSRMKAVAYLASYLSRAKFISSSLVTSILQRLVDWCFEYCQLQESR 1369
             +L D FV     P +RM AVAYLASYLSR KF+++S V +IL+RLV WC EYC++ +  
Sbjct: 353  RVLADFFVCSTFPPLNRMSAVAYLASYLSRGKFLTASFVANILERLVVWCLEYCKIHDGD 412

Query: 1370 EKMISPQADRIFYSGCQAVMYILCFRLRSISDVPHLKQLLFHLPLDSILCHPTLDPLKVC 1549
               I+P+A ++FYSGCQA+MY+LCFR+RS+ +VPHL+  L  LPL++IL HP L PLKVC
Sbjct: 413  ---INPKAHQVFYSGCQAIMYVLCFRMRSMMNVPHLRSQLLLLPLETILKHP-LSPLKVC 468

Query: 1550 LPLIVQEFLRQASAARLFKKPMPYFYDNSLESEFSKAFGGIQRLDMFFPFDPYLLKESDR 1729
            LP IV+EFLRQA AARLF     + + + LESE S+AFGGI+RLDMFFPFDP LLK+ DR
Sbjct: 469  LPSIVEEFLRQAKAARLFTVSETFIFSDLLESELSRAFGGIERLDMFFPFDPCLLKKCDR 528

Query: 1730 FMRPNFEFWDNVRTTYSN 1783
            F+RPNF +W  +RTTY +
Sbjct: 529  FIRPNFVYWSMIRTTYDD 546


>ref|XP_004155826.1| PREDICTED: RNA polymerase I-specific transcription initiation factor
            RRN3-like [Cucumis sativus]
          Length = 625

 Score =  455 bits (1171), Expect = e-125
 Identities = 255/561 (45%), Positives = 359/561 (63%), Gaps = 14/561 (2%)
 Frame = +2

Query: 137  MGVEPQGNGFSVDGAEEGFISDSEAFASVINVLDGVRMAPSLVAQVDKEQYYYLVSVVNP 316
            MG E + N   +   E+  ++D++       ++D +R   S V+  D + Y  LV V++ 
Sbjct: 1    MGAELENNQAQLHAMEDVNLTDAQ-------LVDFIRGFLSSVSLGDIDGYNQLVGVIHH 53

Query: 317  GRKIGPVDEALTVTALKALTRAVFKIDIMYHGALLNNIFLTSIWDYDLETRNAFLELITT 496
              ++ P + AL VT LKAL+ AV  IDI+ H +LL  IF  S+WDY     +A +ELI +
Sbjct: 54   RDRLSPDEVALLVTCLKALSGAVSCIDIILHESLLAAIFKMSLWDYGSNVMDALIELIIS 113

Query: 497  MATLPDKFLENCLHVLLCNFRPPN----WLKAPFCHSKRWLMRKKEVHSELHLALHCITT 664
            +A    K++++CL +L+ NF PPN     LK P       L RK+EV S +H AL  I+ 
Sbjct: 114  LAVSNGKYVDSCLDMLVNNFMPPNSYMDLLKKP-----HGLTRKEEVLSRVHTALKDISD 168

Query: 665  LVPLAPVRLKCLIEKLMSRVTEDKYIMVTYVEGLLGLEKNEIGKFLGSTVMAKVVDLLTD 844
            LVPLAP+RL+  +   M RV  ++ +   YVE +L LEK  + +F+G  ++  +VD L D
Sbjct: 169  LVPLAPLRLEQKVVHKMQRVFFNESLTTIYVENMLRLEKGALSEFVGRKILTALVDKLLD 228

Query: 845  LDVNIPWEDILQEEQNKSVFVIELGDSNQDDEHSSIKQNGV----------LKCNVFADK 994
            LDV I W+DILQ++ +K +F +EL D   DD    I ++            L  NV A+ 
Sbjct: 229  LDVEIGWDDILQDDFSKGIFEMELEDD--DDTTDDINEDSSELPRELSRRSLGGNVIAET 286

Query: 995  LDGLMVVVCEHLKSCADTGCLLEGFDRLSEIFRRAVLKLHKSKFTQFLIFYACSLDPDTC 1174
            LD L+V+  EHL+SC   G L E FD L   F+R VL  +KSKF QF++FYACSLDP+ C
Sbjct: 287  LDSLIVLTFEHLESCERDGRLNEVFDILLLSFQRTVLTAYKSKFAQFIVFYACSLDPEVC 346

Query: 1175 GLKFAILLTDIFVSKDEDPDSRMKAVAYLASYLSRAKFISSSLVTSILQRLVDWCFEYCQ 1354
            G +FAI L D+FVS ++ P  RM AV+YLAS+LSR KF+++SLVT+IL+RLVDWC EY  
Sbjct: 347  GARFAISLADMFVSCNDPPLIRMSAVSYLASFLSRGKFLTTSLVTTILKRLVDWCLEY-- 404

Query: 1355 LQESREKMISPQADRIFYSGCQAVMYILCFRLRSISDVPHLKQLLFHLPLDSILCHPTLD 1534
              ++     +P+A ++FYSGCQA+MY+LCFR+RSI ++P LK  L  +P+  +L H  L 
Sbjct: 405  -GKTLNVDPNPKAHKVFYSGCQAIMYVLCFRMRSILEIPRLKSQLLLMPIGPLLTH-RLS 462

Query: 1535 PLKVCLPLIVQEFLRQASAARLFKKPMPYFYDNSLESEFSKAFGGIQRLDMFFPFDPYLL 1714
            PLKVCLP IV+EFLRQA  A LF     + ++  LES++S++FGG++RLDMFFPFDP LL
Sbjct: 463  PLKVCLPSIVEEFLRQAKVANLFTPSENFIFNGLLESDYSRSFGGLERLDMFFPFDPCLL 522

Query: 1715 KESDRFMRPNFEFWDNVRTTY 1777
            K+ DR++RP+F +W  VR TY
Sbjct: 523  KKCDRYLRPHFVYWSMVRPTY 543


>ref|XP_004133864.1| PREDICTED: RNA polymerase I-specific transcription initiation factor
            RRN3-like [Cucumis sativus]
          Length = 626

 Score =  455 bits (1171), Expect = e-125
 Identities = 255/561 (45%), Positives = 359/561 (63%), Gaps = 14/561 (2%)
 Frame = +2

Query: 137  MGVEPQGNGFSVDGAEEGFISDSEAFASVINVLDGVRMAPSLVAQVDKEQYYYLVSVVNP 316
            MG E + N   +   E+  ++D++       ++D +R   S V+  D + Y  LV V++ 
Sbjct: 1    MGAELENNQAQLHAMEDVNLTDAQ-------LVDFIRGFLSSVSLGDIDGYNQLVGVIHH 53

Query: 317  GRKIGPVDEALTVTALKALTRAVFKIDIMYHGALLNNIFLTSIWDYDLETRNAFLELITT 496
              ++ P + AL VT LKAL+ AV  IDI+ H +LL  IF  S+WDY     +A +ELI +
Sbjct: 54   RDRLSPDEVALLVTCLKALSGAVSCIDIILHESLLAAIFKMSLWDYGSNVMDALIELIIS 113

Query: 497  MATLPDKFLENCLHVLLCNFRPPN----WLKAPFCHSKRWLMRKKEVHSELHLALHCITT 664
            +A    K++++CL +L+ NF PPN     LK P       L RK+EV S +H AL  I+ 
Sbjct: 114  LAVSNGKYVDSCLDMLVNNFMPPNSYMDLLKKP-----HGLTRKEEVLSRVHTALKDISD 168

Query: 665  LVPLAPVRLKCLIEKLMSRVTEDKYIMVTYVEGLLGLEKNEIGKFLGSTVMAKVVDLLTD 844
            LVPLAP+RL+  +   M RV  ++ +   YVE +L LEK  + +F+G  ++  +VD L D
Sbjct: 169  LVPLAPLRLEQKVVHKMQRVFFNESLTTIYVENMLRLEKGALSEFVGRKILTALVDKLLD 228

Query: 845  LDVNIPWEDILQEEQNKSVFVIELGDSNQDDEHSSIKQNGV----------LKCNVFADK 994
            LDV I W+DILQ++ +K +F +EL D   DD    I ++            L  NV A+ 
Sbjct: 229  LDVEIGWDDILQDDFSKGIFEMELEDD--DDTTDDINEDSSELPRELSRRSLGGNVIAET 286

Query: 995  LDGLMVVVCEHLKSCADTGCLLEGFDRLSEIFRRAVLKLHKSKFTQFLIFYACSLDPDTC 1174
            LD L+V+  EHL+SC   G L E FD L   F+R VL  +KSKF QF++FYACSLDP+ C
Sbjct: 287  LDSLIVLTFEHLESCERDGRLNEVFDILLLSFQRTVLTAYKSKFAQFIVFYACSLDPEVC 346

Query: 1175 GLKFAILLTDIFVSKDEDPDSRMKAVAYLASYLSRAKFISSSLVTSILQRLVDWCFEYCQ 1354
            G +FAI L D+FVS ++ P  RM AV+YLAS+LSR KF+++SLVT+IL+RLVDWC EY  
Sbjct: 347  GARFAISLADMFVSCNDPPLIRMSAVSYLASFLSRGKFLTTSLVTTILKRLVDWCLEY-- 404

Query: 1355 LQESREKMISPQADRIFYSGCQAVMYILCFRLRSISDVPHLKQLLFHLPLDSILCHPTLD 1534
              ++     +P+A ++FYSGCQA+MY+LCFR+RSI ++P LK  L  +P+  +L H  L 
Sbjct: 405  -GKTLNVDPNPKAHKVFYSGCQAIMYVLCFRMRSILEIPRLKSQLLLMPIGPLLTH-RLS 462

Query: 1535 PLKVCLPLIVQEFLRQASAARLFKKPMPYFYDNSLESEFSKAFGGIQRLDMFFPFDPYLL 1714
            PLKVCLP IV+EFLRQA  A LF     + ++  LES++S++FGG++RLDMFFPFDP LL
Sbjct: 463  PLKVCLPSIVEEFLRQAKVANLFTPSENFIFNGLLESDYSRSFGGLERLDMFFPFDPCLL 522

Query: 1715 KESDRFMRPNFEFWDNVRTTY 1777
            K+ DR++RP+F +W  VR TY
Sbjct: 523  KKCDRYLRPHFVYWSMVRPTY 543


>ref|XP_002263973.2| PREDICTED: RNA polymerase I-specific transcription initiation factor
            RRN3-like [Vitis vinifera]
          Length = 636

 Score =  452 bits (1162), Expect = e-124
 Identities = 254/567 (44%), Positives = 353/567 (62%), Gaps = 18/567 (3%)
 Frame = +2

Query: 137  MGVEPQGNGFSVDGAEEGFISDSEAFASVINVLDGVRMAPSLVAQVDKEQYYYLVSVVNP 316
            MGVE   +       EE   SDSE    V + L  V +        D + Y  L+ V++ 
Sbjct: 1    MGVELATDRAGFHEMEEVNFSDSELVYHVRHALQSVPLG-------DSDSYDQLIGVLHH 53

Query: 317  GRKIGPVDEALTVTALKALTRAVFKIDIMYHGALLNNIFLTSIWDYDLETRNAFLELITT 496
              ++ P + AL VT+LKAL+ AV  ID+++H +LL++IF  S+W+Y  +  +A LELI +
Sbjct: 54   KERLAPDEVALLVTSLKALSGAVSCIDMVHHKSLLSSIFGMSLWNYGPDVMDALLELILS 113

Query: 497  MATLPDKFLENCLHVLLCNFRPPNWLKAPFCHSKRWLMRKKEVHSELHLALHCITTLVPL 676
            +A     +L+  L +L+ NF PP  L   F    R L RK +V S +H  L  I  LVPL
Sbjct: 114  LAASSGNYLDCSLDMLVSNFMPPYSL-LDFLKQPRGLARKDQVLSRVHSTLKDIADLVPL 172

Query: 677  APVRLKCLIEKLM---------SRVTEDKYIMVTYVEGLLGLEKNEIGKFLGSTVMAKVV 829
            AP RL  ++ + M         S +    + +  YVE +L LE   I + +G+ ++  ++
Sbjct: 173  APSRLVPIVIQRMPNVFTKEPVSSICSTLFRIQIYVENMLRLEGGAIRELVGNMMLVALM 232

Query: 830  DLLTDLDVNIPWEDILQEEQNKSVFVIELGDSNQDDE---------HSSIKQNGVLKCNV 982
            D L DLDV I WE++LQ++ +K +F +EL D  +  +         H        L  N+
Sbjct: 233  DRLVDLDVEIAWEEVLQDDCSKGIFEMELEDMEEPADDVENDGGELHRGSLSRKSLGGNL 292

Query: 983  FADKLDGLMVVVCEHLKSCADTGCLLEGFDRLSEIFRRAVLKLHKSKFTQFLIFYACSLD 1162
             A+KLD LMV+  EHL+SC   G L+E F+ L   F+  VL   KSKF QF++FYAC+LD
Sbjct: 293  IAEKLDSLMVLTFEHLESCEAGGRLIEVFETLVLSFQTTVLNAFKSKFAQFVMFYACALD 352

Query: 1163 PDTCGLKFAILLTDIFVSKDEDPDSRMKAVAYLASYLSRAKFISSSLVTSILQRLVDWCF 1342
            P+ CG++FA +L D FV     P +RM AVAYLASYLSR KF+++S V +IL+RLV WC 
Sbjct: 353  PENCGVRFARVLADFFVCSTFPPLNRMSAVAYLASYLSRGKFLTASFVANILERLVVWCL 412

Query: 1343 EYCQLQESREKMISPQADRIFYSGCQAVMYILCFRLRSISDVPHLKQLLFHLPLDSILCH 1522
            EYC++ +     I+P+A ++FYSGCQA+MY+LCFR+RS+ +VPHL+  L  LPL++IL H
Sbjct: 413  EYCKIHDGD---INPKAHQVFYSGCQAIMYVLCFRMRSMMNVPHLRSQLLLLPLETILKH 469

Query: 1523 PTLDPLKVCLPLIVQEFLRQASAARLFKKPMPYFYDNSLESEFSKAFGGIQRLDMFFPFD 1702
            P L PLKVCLP IV+EFLRQA AARLF     + + + LESE S+AFGGI+RLDMFFPFD
Sbjct: 470  P-LSPLKVCLPSIVEEFLRQAKAARLFTVSETFIFSDLLESELSRAFGGIERLDMFFPFD 528

Query: 1703 PYLLKESDRFMRPNFEFWDNVRTTYSN 1783
            P LLK+ DRF+RPNF +W  +RTTY +
Sbjct: 529  PCLLKKCDRFIRPNFVYWSMIRTTYDD 555


>gb|EXB36892.1| hypothetical protein L484_016497 [Morus notabilis]
          Length = 616

 Score =  449 bits (1156), Expect = e-123
 Identities = 248/549 (45%), Positives = 352/549 (64%), Gaps = 8/549 (1%)
 Frame = +2

Query: 161  GFSVDGAEEGFISDSEAFASVINVLDGVRMAPSLVAQVDKEQYYYLVSVVNPGRKIGPVD 340
            G  +   E GF    +A  +  +++  VR A + V+  D ++Y  LV+V++    + P +
Sbjct: 2    GVELRNGEAGFHELDDADFTDYDLVYHVRDALTSVSMGDSDKYNELVAVMHHRGPLAPDE 61

Query: 341  EALTVTALKALTRAVFKIDIMYHGALLNNIFLTSIWDYDLETRNAFLELITTMATLPDKF 520
             AL VT+LKAL+ AV  ID + H +LL++IF  ++W+Y  +  +A LELI ++A     +
Sbjct: 62   VALLVTSLKALSGAVSYIDSVLHESLLSSIFSMNMWNYRPDVMDALLELIISLAASNGTY 121

Query: 521  LENCLHVLLCNFRPPNWLKAPFCHSKRWLMRKKEVHSELHLALHCITTLVPLAPVRLKCL 700
            +++CL +L+ NF PPN+         R + RK +V S +H +L  +  LVPL+P+RL  +
Sbjct: 122  IDSCLDMLVGNFTPPNYF-TDMLKQPRGIARKDQVLSRVHSSLKVLADLVPLSPMRLLPI 180

Query: 701  IEKLMSRVTEDKYIMVTYVEGLLGLEKNEIGKFLGSTVMAKVVDLLTDLDVNIPWEDILQ 880
            I +        + I+V YVE +L LE    G+ +GS +++ +VDLL DLDV I W+DILQ
Sbjct: 181  IIQRKPHYCSKEIILVIYVENMLKLESGIFGELVGSAMLSGLVDLLLDLDVEIGWDDILQ 240

Query: 881  EEQNKSVFVIELGDSNQDDEHSSIKQNGV--------LKCNVFADKLDGLMVVVCEHLKS 1036
            +E  K +F +EL D ++D +   +    +        L  N+FA KLD LMV++ EHL+S
Sbjct: 241  DESAKGIFSMELEDVDEDIDDELMDGGELPRELSRKSLVGNLFARKLDSLMVLIFEHLES 300

Query: 1037 CADTGCLLEGFDRLSEIFRRAVLKLHKSKFTQFLIFYACSLDPDTCGLKFAILLTDIFVS 1216
            C     L+E F+ L + F++ VL  +KSKF+QF++FYAC+LDP+ CG++FA +L D F+S
Sbjct: 301  CEVGRRLVEVFETLLQPFQKTVLTAYKSKFSQFVMFYACALDPENCGVRFANMLGDTFIS 360

Query: 1217 KDEDPDSRMKAVAYLASYLSRAKFISSSLVTSILQRLVDWCFEYCQLQESREKMISPQAD 1396
                P  RM AVAYLASYLSR KF+S+SL+   L+RLVDWC +YC +QE     I+P+A 
Sbjct: 361  NSHPPLLRMSAVAYLASYLSRGKFLSTSLIADTLKRLVDWCLDYCTIQEGE---INPKAH 417

Query: 1397 RIFYSGCQAVMYILCFRLRSISDVPHLKQLLFHLPLDSILCHPTLDPLKVCLPLIVQEFL 1576
            RIFYSGCQA+MY LCFR+RSI  VP  K  L  +P++ IL H  L PLKVCLP IV EFL
Sbjct: 418  RIFYSGCQAIMYALCFRMRSIMGVPWFKSQLL-MPINLILSH-KLSPLKVCLPSIVTEFL 475

Query: 1577 RQASAARLFKKPMPYFYDNSLESEFSKAFGGIQRLDMFFPFDPYLLKESDRFMRPNFEFW 1756
            RQ+ AA LF     + +D+ LESE SK FGG++RLDMFFPFDP LLK  D F+RP + +W
Sbjct: 476  RQSKAAGLFITSERFNFDDYLESELSKGFGGMERLDMFFPFDPCLLKRCDSFIRPYYVYW 535

Query: 1757 DNVRTTYSN 1783
              VR TY +
Sbjct: 536  SMVRPTYDD 544


>ref|XP_006483466.1| PREDICTED: RNA polymerase I-specific transcription initiation factor
            RRN3-like isoform X1 [Citrus sinensis]
          Length = 628

 Score =  449 bits (1156), Expect = e-123
 Identities = 254/563 (45%), Positives = 360/563 (63%), Gaps = 16/563 (2%)
 Frame = +2

Query: 137  MGVEPQGNGFSVDGAEEGFISDSEAFASVINVLDGVRMAPSLVAQVDKEQYYYLVSVVNP 316
            MGVE       +D AE   + D     S + ++  VR A + V   D + Y  LV+V++ 
Sbjct: 1    MGVE-----LPIDHAESHEMEDVNI--SDLELVYHVREALTSVQSGDNDNYNQLVAVMHL 53

Query: 317  GRKIGPVDEALTVTALKALTRAVFKIDIMYHGALLNNIFLTSIWDYDLETRNAFLELITT 496
              ++ P + AL  T+LKAL+ AV  IDI +H +LL +IF  S+W+YD +  +A   LI +
Sbjct: 54   SGRLDPDNRALLETSLKALSGAVSYIDISHHESLLVSIFGMSMWNYDPDVMDALKGLIIS 113

Query: 497  MATLPDKFLENCLHVLLCNFRPPNW----LKAPFCHSKRWLMRKKEVHSELHLALHCITT 664
            +A    K++++CL +L+ NF PP++    LK P       L RK +V S +H AL  I  
Sbjct: 114  LAASNGKYVDSCLTMLVSNFTPPSYFLDKLKEP-----HGLERKHQVLSRVHAALKSIFD 168

Query: 665  LVPLAPVRLKCLIEKLMSRVT---EDKYIMVTYVEGLLGLEKNEIGKFLGSTVMAKVVDL 835
            LVPLAP RL  ++ + M  V    E   ++V Y E +L LE + +G+ + ST++  VVD 
Sbjct: 169  LVPLAPTRLLPIVVQRMPTVHNKHERLKMIVVYTENMLKLESSAMGELVRSTLLMAVVDR 228

Query: 836  LTDLDVNIPWEDILQEEQNKSVFVIELGDSNQ---------DDEHSSIKQNGVLKCNVFA 988
            L DLD+ I W+DIL ++ +K +F +EL D  +         D+  S       L  N+ A
Sbjct: 229  LIDLDMEIGWDDILHDDFSKGIFEMELEDVEEAADDAEQVGDELPSGSLSRKSLSGNLIA 288

Query: 989  DKLDGLMVVVCEHLKSCADTGCLLEGFDRLSEIFRRAVLKLHKSKFTQFLIFYACSLDPD 1168
            + LD LMV+  EHL+SC  TG L+E F+ L + F+  VL  +KSKF QF++FYAC+LDP+
Sbjct: 289  ELLDSLMVLTFEHLESCEGTGRLIEVFEILLQSFQITVLNAYKSKFAQFVMFYACALDPE 348

Query: 1169 TCGLKFAILLTDIFVSKDEDPDSRMKAVAYLASYLSRAKFISSSLVTSILQRLVDWCFEY 1348
             CGL+FA +L D+FVS    P +RM AV+YLAS+LSRA+F+S   + S+L+RLVDWC EY
Sbjct: 349  NCGLRFATMLADVFVSGLYPPLTRMSAVSYLASFLSRARFLSPCFIVSLLKRLVDWCLEY 408

Query: 1349 CQLQESREKMISPQADRIFYSGCQAVMYILCFRLRSISDVPHLKQLLFHLPLDSILCHPT 1528
            C +       I+P+A R+FYSGCQA+MY+LCFR+RSI D+P LK  L  +PL+++L H  
Sbjct: 409  CNILGGD---INPKAHRVFYSGCQAIMYVLCFRMRSIMDIPRLKSQLLLMPLETVLKH-D 464

Query: 1529 LDPLKVCLPLIVQEFLRQASAARLFKKPMPYFYDNSLESEFSKAFGGIQRLDMFFPFDPY 1708
            L+PLKVCLP +V EFL+Q+ AARLF     + +++ LESE S+AFGG++RLDMFFPFDP 
Sbjct: 465  LNPLKVCLPSVVSEFLQQSKAARLFTVSETFVFNDLLESELSRAFGGLERLDMFFPFDPC 524

Query: 1709 LLKESDRFMRPNFEFWDNVRTTY 1777
            LLK+SD F+RPNF +W  V+T Y
Sbjct: 525  LLKKSDSFIRPNFVYWSMVKTAY 547


>ref|XP_003534228.1| PREDICTED: RNA polymerase I-specific transcription initiation factor
            RRN3-like [Glycine max]
          Length = 628

 Score =  447 bits (1151), Expect = e-123
 Identities = 248/548 (45%), Positives = 357/548 (65%), Gaps = 16/548 (2%)
 Frame = +2

Query: 194  ISDSEAFASVIN-------VLDGVRMAPSLVAQVDKEQYYYLVSVVNPGRKIGPVDEALT 352
            +SD E F+ + N       ++   R     V   D+E Y  LV  ++P + + P + A+ 
Sbjct: 6    VSDKEEFSQMENNDFSDSQLVHHFRGVLVAVTTGDRENYDELVGYLHPKKHLNPDEVAIL 65

Query: 353  VTALKALTRAVFKIDIMYHGALLNNIFLTSIWDYDLETRNAFLELITTMATLPDKFLENC 532
            VT LKAL+ AV  ID ++H +LL  +   S+W+  ++  +A LELI ++A    K+++ C
Sbjct: 66   VTTLKALSGAVSYIDSVHHESLLFAVSRMSLWNCGIDIMDALLELIISLAVSNGKYIDWC 125

Query: 533  LHVLLCNFRPPNWLKAPFCHSKRWLMRKKEVHSELHLALHCITTLVPLAPVRLKCLIEKL 712
            L +L+ NF PP +L       +  + RK +V S +H AL  I  LVPLAP+RL  ++ + 
Sbjct: 126  LEMLVKNFVPPFYLLDSL-RQENGIDRKNKVLSRVHAALKEIADLVPLAPLRLSPIVIQK 184

Query: 713  MSRVTEDKYIMVTYVEGLLGLEKNEIGKFLGSTVMAKVVDLLTDLDVNIPWEDILQEEQN 892
            M  V   +  +V YVE +L LE   +G+ +GST++  +VD L +LDV I W+ ILQE+  
Sbjct: 185  MPSVFSKETEIVMYVENMLRLESGALGETVGSTMLPALVDRLLELDVEIGWDGILQEDA- 243

Query: 893  KSVFVIELGDSNQ---DDEH------SSIKQNGVLKCNVFADKLDGLMVVVCEHLKSCAD 1045
            K +F +EL D  +   +DE+      S +     L+ N+  +KLD LMV+   HL+SC +
Sbjct: 244  KGIFEMELEDVTEFTDEDENCDSMLSSELLNRKNLQGNLVVEKLDSLMVLAFLHLESCQN 303

Query: 1046 TGCLLEGFDRLSEIFRRAVLKLHKSKFTQFLIFYACSLDPDTCGLKFAILLTDIFVSKDE 1225
            +G L E F+ L   F+R VL  +KSKFTQF++FYAC+LDP+ CG+KFA++L D+F     
Sbjct: 304  SGRLAEVFNTLLASFQRTVLNAYKSKFTQFVMFYACALDPEGCGVKFAMVLADMFGGDAN 363

Query: 1226 DPDSRMKAVAYLASYLSRAKFISSSLVTSILQRLVDWCFEYCQLQESREKMISPQADRIF 1405
             P +RM AVAYLASYL+RAKF+S++LVTSI+Q LVDWC+ YC+    R+  ++P+A ++F
Sbjct: 364  PPITRMSAVAYLASYLTRAKFLSAALVTSIIQSLVDWCYAYCKF---RDFDMNPRAHQVF 420

Query: 1406 YSGCQAVMYILCFRLRSISDVPHLKQLLFHLPLDSILCHPTLDPLKVCLPLIVQEFLRQA 1585
            YSGCQA+MYI+CFR+RS+ DVP LK  L ++P+++IL H  L PLKVCLP +V EFLRQA
Sbjct: 421  YSGCQAIMYIMCFRMRSLMDVPRLKLQLLNMPMEAILKH-KLSPLKVCLPTVVVEFLRQA 479

Query: 1586 SAARLFKKPMPYFYDNSLESEFSKAFGGIQRLDMFFPFDPYLLKESDRFMRPNFEFWDNV 1765
             AA+LF     + +D+ LES+ SKAFGG+ RLDMFFPFDP LLK S+ ++RP+F  W  V
Sbjct: 480  KAAQLFMASESFVFDDMLESDLSKAFGGMDRLDMFFPFDPCLLKRSESYIRPHFVRWSKV 539

Query: 1766 RTTYSNFD 1789
            RTTY + D
Sbjct: 540  RTTYDDDD 547


>ref|XP_003547884.1| PREDICTED: RNA polymerase I-specific transcription initiation factor
            RRN3-like isoform X1 [Glycine max]
            gi|571527491|ref|XP_006599254.1| PREDICTED: RNA
            polymerase I-specific transcription initiation factor
            RRN3-like isoform X2 [Glycine max]
          Length = 627

 Score =  447 bits (1150), Expect = e-123
 Identities = 246/540 (45%), Positives = 356/540 (65%), Gaps = 9/540 (1%)
 Frame = +2

Query: 197  SDSEAFASVINVLDGVRMAPSLVAQVDKEQYYYLVSVVNPGRKIGPVDEALTVTALKALT 376
            +D  + + ++    GV +A   V   D+E Y  LV  ++P + + P + A+ VT LKAL+
Sbjct: 17   NDDFSDSQLVRHFRGVLVA---VTTGDRENYDELVGYLHPKKNLNPDEVAILVTTLKALS 73

Query: 377  RAVFKIDIMYHGALLNNIFLTSIWDYDLETRNAFLELITTMATLPDKFLENCLHVLLCNF 556
             AV  ID ++H +LL  +   S+W+Y ++  +A LELI ++A    K+++ CL +L+ +F
Sbjct: 74   GAVSYIDSVHHESLLFAVSRMSLWNYGIDIMDALLELIISLAASNGKYIDWCLEMLVKHF 133

Query: 557  RPPNWLKAPFCHSKRWLMRKKEVHSELHLALHCITTLVPLAPVRLKCLIEKLMSRVTEDK 736
             PP +L       +  + RK +V S +H AL  I  LVPLAP+RL  ++ + M  V   +
Sbjct: 134  VPPFYLLDSL-RQENGIDRKNKVLSRVHAALKEIADLVPLAPLRLSPIVIQKMPSVFSKE 192

Query: 737  YIMVTYVEGLLGLEKNEIGKFLGSTVMAKVVDLLTDLDVNIPWEDILQEEQNKSVFVIEL 916
              +V YVE +L LE   IG+ +GS ++  +VD L +LDV I W+ ILQE+  K +F +EL
Sbjct: 193  TEIVMYVENMLRLESGAIGETVGSIMLPALVDRLLELDVEIGWDGILQEDA-KGIFEMEL 251

Query: 917  GDSNQ---DDEH------SSIKQNGVLKCNVFADKLDGLMVVVCEHLKSCADTGCLLEGF 1069
             D  +   +DE+      S +     L+ N+  +KLD LMV+   HL+SC  +G L E F
Sbjct: 252  EDVTEFADEDENCDSMPPSELLNRKNLQGNLVVEKLDSLMVLAFLHLESCQSSGRLTEVF 311

Query: 1070 DRLSEIFRRAVLKLHKSKFTQFLIFYACSLDPDTCGLKFAILLTDIFVSKDEDPDSRMKA 1249
            D L   F+R VL  +KSKFTQ+++FYAC+LDP+ CG+KFA++L D+F      P +RM A
Sbjct: 312  DTLLASFQRTVLNAYKSKFTQYVMFYACALDPEGCGVKFAMVLADMFGCDVNPPITRMSA 371

Query: 1250 VAYLASYLSRAKFISSSLVTSILQRLVDWCFEYCQLQESREKMISPQADRIFYSGCQAVM 1429
             AYLASYL+RAKF+S++LVT+I+Q LVDWC+ YC+L   R+  ++P+A ++FYSGCQA+M
Sbjct: 372  AAYLASYLTRAKFLSAALVTNIIQSLVDWCYAYCKL---RDFDMNPRAHQVFYSGCQAIM 428

Query: 1430 YILCFRLRSISDVPHLKQLLFHLPLDSILCHPTLDPLKVCLPLIVQEFLRQASAARLFKK 1609
            YILCFR+RS+ D+P LK  L ++P+++IL H  L PLKVCLP +V EFLRQA AA+LF  
Sbjct: 429  YILCFRMRSLMDIPRLKLQLLNMPMEAILKH-KLSPLKVCLPTVVVEFLRQAKAAQLFMA 487

Query: 1610 PMPYFYDNSLESEFSKAFGGIQRLDMFFPFDPYLLKESDRFMRPNFEFWDNVRTTYSNFD 1789
               + +D+ LES+ SKAFGGI RLDMFFPFDP LLK+S+ ++RP+F  W  VRTTY + D
Sbjct: 488  SESFVFDDMLESDLSKAFGGIDRLDMFFPFDPCLLKKSESYIRPHFVRWSKVRTTYDDDD 547


>ref|XP_006483559.1| PREDICTED: RNA polymerase I-specific transcription initiation factor
            rrn3-like isoform X1 [Citrus sinensis]
          Length = 628

 Score =  446 bits (1147), Expect = e-122
 Identities = 244/528 (46%), Positives = 346/528 (65%), Gaps = 16/528 (3%)
 Frame = +2

Query: 242  VRMAPSLVAQVDKEQYYYLVSVVNPGRKIGPVDEALTVTALKALTRAVFKIDIMYHGALL 421
            VR A + V   D + Y  LV+V++   ++ P + AL  T+LKAL+ AV  IDI +H +LL
Sbjct: 29   VREALTSVQSGDNDNYNQLVAVMHLSGRLDPDNRALLETSLKALSGAVSYIDISHHESLL 88

Query: 422  NNIFLTSIWDYDLETRNAFLELITTMATLPDKFLENCLHVLLCNFRPPNW----LKAPFC 589
             +IF  S+W+YD +  +A   LI ++A    K++++CL +L+ NF PP++    LK P  
Sbjct: 89   VSIFGMSMWNYDPDIMDALKGLIISLAASSGKYVDSCLTMLVGNFTPPSYFLDKLKEP-- 146

Query: 590  HSKRWLMRKKEVHSELHLALHCITTLVPLAPVRLKCLIEKLMSRVT---EDKYIMVTYVE 760
                 L RK +V S +H AL  I  LVPLAP+RL  ++ + M  V    E   ++V Y E
Sbjct: 147  ---HGLERKHQVLSRVHAALKSIFDLVPLAPMRLLPIVVQRMPTVHNKHERLKLIVVYTE 203

Query: 761  GLLGLEKNEIGKFLGSTVMAKVVDLLTDLDVNIPWEDILQEEQNKSVFVIELGDSNQ--- 931
             +L LE + +G+ + ST++  VVD L DLD+ I W+DIL ++ +K +F +EL D  +   
Sbjct: 204  NMLKLESSAMGELVRSTLLMAVVDRLIDLDMEIGWDDILHDDFSKGIFEMELEDVEEAAD 263

Query: 932  ------DDEHSSIKQNGVLKCNVFADKLDGLMVVVCEHLKSCADTGCLLEGFDRLSEIFR 1093
                  D+  S       L  N+ A+ LD L+V+  EHL+SC  TG L+E F+ L + F+
Sbjct: 264  DAEQVGDELPSGSISRKSLSGNLIAELLDSLLVLTFEHLESCEGTGRLIEVFEILLQSFQ 323

Query: 1094 RAVLKLHKSKFTQFLIFYACSLDPDTCGLKFAILLTDIFVSKDEDPDSRMKAVAYLASYL 1273
              VL  +KSKF QF++FYAC+LDP+ CGL+FA +L D+FVS    P +RM +V+YLASYL
Sbjct: 324  ITVLNAYKSKFAQFVMFYACALDPENCGLRFATMLADVFVSGLYPPLTRMSSVSYLASYL 383

Query: 1274 SRAKFISSSLVTSILQRLVDWCFEYCQLQESREKMISPQADRIFYSGCQAVMYILCFRLR 1453
            SRA+F+S   + S+L+RLVDWC EYC +       I+P+A R+FYSGCQA+MY+LCFR+R
Sbjct: 384  SRARFLSPCFIVSLLKRLVDWCLEYCNIPGGN---INPKAHRVFYSGCQAIMYVLCFRMR 440

Query: 1454 SISDVPHLKQLLFHLPLDSILCHPTLDPLKVCLPLIVQEFLRQASAARLFKKPMPYFYDN 1633
            SI DVP LK  L  +PL+++L H  L+PLKVCLP +V EFL+Q+ AARLF     + +++
Sbjct: 441  SIMDVPRLKSQLLLMPLETVLKH-NLNPLKVCLPSVVSEFLQQSKAARLFTVSETFIFND 499

Query: 1634 SLESEFSKAFGGIQRLDMFFPFDPYLLKESDRFMRPNFEFWDNVRTTY 1777
             LESE S+ FGG++RLDMFFPFDP LLK+SD F+RPNF +W  V+T Y
Sbjct: 500  LLESELSRDFGGLERLDMFFPFDPCLLKKSDSFIRPNFIYWSMVKTAY 547