BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00031816
         (277 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI29513.3| unnamed protein product [Vitis vinifera]               90   3e-16
ref|XP_002263286.2| PREDICTED: DNA mismatch repair protein Msh3-...    90   4e-16
emb|CBI31781.3| unnamed protein product [Vitis vinifera]               90   4e-16
emb|CBI37346.3| unnamed protein product [Vitis vinifera]               90   4e-16
ref|XP_004496581.1| PREDICTED: DNA mismatch repair protein MSH3-...    88   1e-15
ref|XP_006283020.1| hypothetical protein CARUB_v10004012mg [Caps...    87   2e-15
ref|XP_006413297.1| hypothetical protein EUTSA_v10024274mg [Eutr...    87   2e-15
gb|EMJ20105.1| hypothetical protein PRUPE_ppa000560mg [Prunus pe...    86   4e-15
ref|XP_002510803.1| DNA mismatch repair protein MSH3, putative [...    85   9e-15
ref|XP_002322465.2| hypothetical protein POPTR_0015s13240g [Popu...    85   1e-14
ref|XP_004168537.1| PREDICTED: DNA mismatch repair protein MSH3-...    85   1e-14
ref|XP_004140847.1| PREDICTED: DNA mismatch repair protein MSH3-...    85   1e-14
ref|XP_006353313.1| PREDICTED: DNA mismatch repair protein MSH3-...    84   1e-14
gb|EOY23170.1| DNA mismatch repair protein MSH3 isoform 2, parti...    83   3e-14
gb|EOY23169.1| DNA mismatch repair protein MSH3 isoform 1 [Theob...    83   3e-14
ref|XP_004234387.1| PREDICTED: DNA mismatch repair protein MSH3-...    83   3e-14
ref|XP_002867605.1| hypothetical protein ARALYDRAFT_492273 [Arab...    83   3e-14
gb|ADT92190.1| DNA mismatch repair protein [Zea mays]                  83   4e-14
gb|ESW15390.1| hypothetical protein PHAVU_007G069100g [Phaseolus...    81   1e-13
gb|ESW15389.1| hypothetical protein PHAVU_007G069100g [Phaseolus...    81   1e-13

>emb|CBI29513.3| unnamed protein product [Vitis vinifera]
          Length = 470

 Score = 90.1 bits (222), Expect = 3e-16
 Identities = 49/98 (50%), Positives = 67/98 (68%), Gaps = 6/98 (6%)
 Frame = +2

Query: 2   RGLSALYTRSTIEAAEDMXXXXXXXXXXXXXNFLACVVEKELVPDHE------GKFCVKV 163
           RGLSALYT++T+EAAED+             N+L CVVEK +  ++       G F V++
Sbjct: 214 RGLSALYTKATLEAAEDVGGGEEECGSYN--NYLVCVVEKGISVENSKDCGVGGGFDVRI 271

Query: 164 ALVAVDVSTGDVVHGEFDDNSIRTGLEAMLISLSPNEM 277
            +VAV VSTGDVVHGEF+DN +R GLEA+++S+SP E+
Sbjct: 272 GIVAVKVSTGDVVHGEFNDNFMRAGLEAVILSMSPAEL 309


>ref|XP_002263286.2| PREDICTED: DNA mismatch repair protein Msh3-like [Vitis vinifera]
          Length = 1137

 Score = 89.7 bits (221), Expect = 4e-16
 Identities = 48/98 (48%), Positives = 68/98 (69%), Gaps = 6/98 (6%)
 Frame = +2

Query: 2   RGLSALYTRSTIEAAEDMXXXXXXXXXXXXXNFLACVVEKELVPDHE------GKFCVKV 163
           RGLSALYT++T+EAAE++             N+L CVVEK +  ++       G F V++
Sbjct: 212 RGLSALYTKATLEAAEEVGGGEEECGSYN--NYLVCVVEKGISVENSKDCGVGGGFDVRI 269

Query: 164 ALVAVDVSTGDVVHGEFDDNSIRTGLEAMLISLSPNEM 277
            +VAV+VSTGDVVHGEF+DN +R GLEA+++S+SP E+
Sbjct: 270 GIVAVEVSTGDVVHGEFNDNFMRAGLEAVILSMSPAEL 307


>emb|CBI31781.3| unnamed protein product [Vitis vinifera]
          Length = 903

 Score = 89.7 bits (221), Expect = 4e-16
 Identities = 48/98 (48%), Positives = 68/98 (69%), Gaps = 6/98 (6%)
 Frame = +2

Query: 2   RGLSALYTRSTIEAAEDMXXXXXXXXXXXXXNFLACVVEKELVPDHE------GKFCVKV 163
           RGLSALYT++T+EAAE++             N+L CVVEK +  ++       G F V++
Sbjct: 80  RGLSALYTKATLEAAEEVGGGEEECGSYN--NYLVCVVEKGISVENSKDCGVGGGFDVRI 137

Query: 164 ALVAVDVSTGDVVHGEFDDNSIRTGLEAMLISLSPNEM 277
            +VAV+VSTGDVVHGEF+DN +R GLEA+++S+SP E+
Sbjct: 138 GIVAVEVSTGDVVHGEFNDNFMRAGLEAVILSMSPAEL 175


>emb|CBI37346.3| unnamed protein product [Vitis vinifera]
          Length = 490

 Score = 89.7 bits (221), Expect = 4e-16
 Identities = 48/98 (48%), Positives = 68/98 (69%), Gaps = 6/98 (6%)
 Frame = +2

Query: 2   RGLSALYTRSTIEAAEDMXXXXXXXXXXXXXNFLACVVEKELVPDHE------GKFCVKV 163
           RGLSALYT++T+EAAED+             N+L CVVEK +  ++       G F V++
Sbjct: 212 RGLSALYTKATLEAAEDVGGGEEECGSYN--NYLVCVVEKGISVENSKDCGVGGGFDVRI 269

Query: 164 ALVAVDVSTGDVVHGEFDDNSIRTGLEAMLISLSPNEM 277
            +VAV+VSTGDVVHG+F+DN +R GLEA+++S+SP E+
Sbjct: 270 GIVAVEVSTGDVVHGKFNDNFMRAGLEAVILSMSPAEL 307


>ref|XP_004496581.1| PREDICTED: DNA mismatch repair protein MSH3-like isoform X1 [Cicer
           arietinum]
          Length = 1076

 Score = 87.8 bits (216), Expect = 1e-15
 Identities = 46/97 (47%), Positives = 68/97 (70%), Gaps = 5/97 (5%)
 Frame = +2

Query: 2   RGLSALYTRSTIEAAEDMXXXXXXXXXXXXXNFLACVVEKELVPDH-----EGKFCVKVA 166
           RGLSALYT++T+EAA+D+             N+L CVVEK ++ +      EG F V++ 
Sbjct: 201 RGLSALYTKATLEAAQDLGGEEDECGTRS--NYLLCVVEKSILGEKSSCGVEGGFDVRIG 258

Query: 167 LVAVDVSTGDVVHGEFDDNSIRTGLEAMLISLSPNEM 277
           +V V++STGDVV+GEF+DN +R+ LEA+++SLSP E+
Sbjct: 259 IVGVEISTGDVVYGEFNDNFLRSELEAVVVSLSPAEL 295


>ref|XP_006283020.1| hypothetical protein CARUB_v10004012mg [Capsella rubella]
           gi|482551725|gb|EOA15918.1| hypothetical protein
           CARUB_v10004012mg [Capsella rubella]
          Length = 1182

 Score = 87.4 bits (215), Expect = 2e-15
 Identities = 47/98 (47%), Positives = 68/98 (69%), Gaps = 6/98 (6%)
 Frame = +2

Query: 2   RGLSALYTRSTIEAAEDMXXXXXXXXXXXXX-NFLACVVEKELVPDHEG-----KFCVKV 163
           RGLSALYT++T+EAAED+              NFL CVV++ + P+  G      F V+V
Sbjct: 292 RGLSALYTKATLEAAEDISGGCVGEEGFGAQSNFLVCVVDETVSPETIGCGLEMSFDVRV 351

Query: 164 ALVAVDVSTGDVVHGEFDDNSIRTGLEAMLISLSPNEM 277
            +V V++STG+VV+GEF+DNS+R+GLEA+++SL P E+
Sbjct: 352 GIVGVEISTGEVVYGEFNDNSMRSGLEAVILSLLPAEL 389


>ref|XP_006413297.1| hypothetical protein EUTSA_v10024274mg [Eutrema salsugineum]
           gi|557114467|gb|ESQ54750.1| hypothetical protein
           EUTSA_v10024274mg [Eutrema salsugineum]
          Length = 1088

 Score = 87.0 bits (214), Expect = 2e-15
 Identities = 47/97 (48%), Positives = 67/97 (69%), Gaps = 5/97 (5%)
 Frame = +2

Query: 2   RGLSALYTRSTIEAAEDMXXXXXXXXXXXXXNFLACVVEKELVPDHEG-----KFCVKVA 166
           RGLSALYT++T+EAAED+             NFL CVV++ +  +  G      F V+V 
Sbjct: 202 RGLSALYTKATLEAAEDISGGCEEGFGSQS-NFLVCVVDERVNTETLGCGLEVSFDVRVG 260

Query: 167 LVAVDVSTGDVVHGEFDDNSIRTGLEAMLISLSPNEM 277
           +V V++STG+VVHGEF+DN +R+GLEA+++SLSP E+
Sbjct: 261 IVGVEISTGEVVHGEFNDNFMRSGLEAVILSLSPAEL 297


>gb|EMJ20105.1| hypothetical protein PRUPE_ppa000560mg [Prunus persica]
          Length = 1096

 Score = 86.3 bits (212), Expect = 4e-15
 Identities = 47/97 (48%), Positives = 67/97 (69%), Gaps = 5/97 (5%)
 Frame = +2

Query: 2   RGLSALYTRSTIEAAEDMXXXXXXXXXXXXXNFLACVVEKELVPDH-----EGKFCVKVA 166
           RGLSALYT++T+EAAED+             N+LACVV+K +  ++     +    VK+ 
Sbjct: 224 RGLSALYTKATLEAAEDVGGKEEGCGGDS--NYLACVVDKSVALENVDGGVDSGIEVKIG 281

Query: 167 LVAVDVSTGDVVHGEFDDNSIRTGLEAMLISLSPNEM 277
           +VAV+ STGDVV+GEF+DN +R+GLEA ++SLSP E+
Sbjct: 282 IVAVEASTGDVVYGEFNDNCMRSGLEAAVLSLSPAEL 318


>ref|XP_002510803.1| DNA mismatch repair protein MSH3, putative [Ricinus communis]
           gi|223549918|gb|EEF51405.1| DNA mismatch repair protein
           MSH3, putative [Ricinus communis]
          Length = 1100

 Score = 85.1 bits (209), Expect = 9e-15
 Identities = 43/92 (46%), Positives = 63/92 (68%)
 Frame = +2

Query: 2   RGLSALYTRSTIEAAEDMXXXXXXXXXXXXXNFLACVVEKELVPDHEGKFCVKVALVAVD 181
           RGLSALYT++T+EAAED+             N+L CVV+K +    +  F  ++  VAV+
Sbjct: 209 RGLSALYTKATLEAAEDVGGREEGCCGES--NYLCCVVDKSIENGVDSGFDTRIGFVAVE 266

Query: 182 VSTGDVVHGEFDDNSIRTGLEAMLISLSPNEM 277
           +STGDVV+GEF+D  +R+GLEA+++SL P E+
Sbjct: 267 ISTGDVVYGEFNDGFLRSGLEAVVLSLMPAEL 298


>ref|XP_002322465.2| hypothetical protein POPTR_0015s13240g [Populus trichocarpa]
           gi|550322628|gb|EEF06592.2| hypothetical protein
           POPTR_0015s13240g [Populus trichocarpa]
          Length = 963

 Score = 84.7 bits (208), Expect = 1e-14
 Identities = 48/93 (51%), Positives = 66/93 (70%), Gaps = 1/93 (1%)
 Frame = +2

Query: 2   RGLSALYTRSTIEAAEDMXXXXXXXXXXXXXNFLACVVEKELVPDHEGK-FCVKVALVAV 178
           RGLSALYT++T+EAAE++             N+L CVVEK L    EG  F V+V +VAV
Sbjct: 63  RGLSALYTKATLEAAENVGGEEEECGGES--NYLCCVVEKGLDCGVEGGVFDVRVGVVAV 120

Query: 179 DVSTGDVVHGEFDDNSIRTGLEAMLISLSPNEM 277
           ++STGDVV+GEF+D  +R+GLEA ++SL+P E+
Sbjct: 121 EISTGDVVYGEFNDGFMRSGLEAFVLSLAPAEL 153


>ref|XP_004168537.1| PREDICTED: DNA mismatch repair protein MSH3-like [Cucumis sativus]
          Length = 966

 Score = 84.7 bits (208), Expect = 1e-14
 Identities = 45/97 (46%), Positives = 65/97 (67%), Gaps = 5/97 (5%)
 Frame = +2

Query: 2   RGLSALYTRSTIEAAEDMXXXXXXXXXXXXXNFLACVVEKELVPDH-----EGKFCVKVA 166
           RGLSALYT++T+EAA+D+             N+L C+VE  +   +     E    VK+ 
Sbjct: 231 RGLSALYTKATLEAAQDLGGAEEGCAGES--NYLFCLVENSMSVQNVDCRIENGVDVKIG 288

Query: 167 LVAVDVSTGDVVHGEFDDNSIRTGLEAMLISLSPNEM 277
           +VA+++STGDV++GE+DDN +R GLEAML+SLSP E+
Sbjct: 289 MVAMEISTGDVIYGEYDDNFMRNGLEAMLLSLSPAEL 325


>ref|XP_004140847.1| PREDICTED: DNA mismatch repair protein MSH3-like [Cucumis sativus]
          Length = 1094

 Score = 84.7 bits (208), Expect = 1e-14
 Identities = 45/97 (46%), Positives = 65/97 (67%), Gaps = 5/97 (5%)
 Frame = +2

Query: 2   RGLSALYTRSTIEAAEDMXXXXXXXXXXXXXNFLACVVEKELVPDH-----EGKFCVKVA 166
           RGLSALYT++T+EAA+D+             N+L C+VE  +   +     E    VK+ 
Sbjct: 214 RGLSALYTKATLEAAQDLGGAEEGCAGES--NYLFCLVENSMSVQNVDCRIENGVDVKIG 271

Query: 167 LVAVDVSTGDVVHGEFDDNSIRTGLEAMLISLSPNEM 277
           +VA+++STGDV++GE+DDN +R GLEAML+SLSP E+
Sbjct: 272 MVAMEISTGDVIYGEYDDNFMRNGLEAMLLSLSPAEL 308


>ref|XP_006353313.1| PREDICTED: DNA mismatch repair protein MSH3-like [Solanum
           tuberosum]
          Length = 1117

 Score = 84.3 bits (207), Expect = 1e-14
 Identities = 49/93 (52%), Positives = 65/93 (69%), Gaps = 1/93 (1%)
 Frame = +2

Query: 2   RGLSALYTRSTIEAAEDMXXXXXXXXXXXXXNFLACVVEKELVPDHEG-KFCVKVALVAV 178
           RGLSALYT++T+EAAED+             N+L CVVEK +  D EG    VK+ +V V
Sbjct: 221 RGLSALYTKATLEAAEDVGGGDEGCGSCN--NYLVCVVEKGI--DLEGCGIDVKLGVVGV 276

Query: 179 DVSTGDVVHGEFDDNSIRTGLEAMLISLSPNEM 277
           +VSTGDVV+GEF+DN +R GLEAM+++L P E+
Sbjct: 277 EVSTGDVVYGEFNDNFMRAGLEAMILNLLPAEL 309


>gb|EOY23170.1| DNA mismatch repair protein MSH3 isoform 2, partial [Theobroma
           cacao]
          Length = 861

 Score = 83.2 bits (204), Expect = 3e-14
 Identities = 47/96 (48%), Positives = 63/96 (65%), Gaps = 4/96 (4%)
 Frame = +2

Query: 2   RGLSALYTRSTIEAAEDMXXXXXXXXXXXXXNFLACVVEKELV----PDHEGKFCVKVAL 169
           RGLSALYT++T+EAAED+             N+L CVVEK L         G   V+V +
Sbjct: 220 RGLSALYTKATLEAAEDVGGKEEGCGGES--NYLVCVVEKGLEFSGSVSGSGAVDVRVGI 277

Query: 170 VAVDVSTGDVVHGEFDDNSIRTGLEAMLISLSPNEM 277
           V V++STGDVV+GEFDD  +R+GLEA++ SL+P E+
Sbjct: 278 VGVEISTGDVVYGEFDDGVMRSGLEAVVFSLAPAEL 313


>gb|EOY23169.1| DNA mismatch repair protein MSH3 isoform 1 [Theobroma cacao]
          Length = 1115

 Score = 83.2 bits (204), Expect = 3e-14
 Identities = 47/96 (48%), Positives = 63/96 (65%), Gaps = 4/96 (4%)
 Frame = +2

Query: 2   RGLSALYTRSTIEAAEDMXXXXXXXXXXXXXNFLACVVEKELV----PDHEGKFCVKVAL 169
           RGLSALYT++T+EAAED+             N+L CVVEK L         G   V+V +
Sbjct: 220 RGLSALYTKATLEAAEDVGGKEEGCGGES--NYLVCVVEKGLEFSGSVSGSGAVDVRVGI 277

Query: 170 VAVDVSTGDVVHGEFDDNSIRTGLEAMLISLSPNEM 277
           V V++STGDVV+GEFDD  +R+GLEA++ SL+P E+
Sbjct: 278 VGVEISTGDVVYGEFDDGVMRSGLEAVVFSLAPAEL 313


>ref|XP_004234387.1| PREDICTED: DNA mismatch repair protein MSH3-like [Solanum
           lycopersicum]
          Length = 1117

 Score = 83.2 bits (204), Expect = 3e-14
 Identities = 50/95 (52%), Positives = 66/95 (69%), Gaps = 3/95 (3%)
 Frame = +2

Query: 2   RGLSALYTRSTIEAAEDMXXXXXXXXXXXXXNFLACVVEKELVPDHEGKFC---VKVALV 172
           RGLSALYT++T+EA+ED+             N+L CVVEK  V D EG  C   VK+ +V
Sbjct: 221 RGLSALYTKATLEASEDVGGGDEGFGSCN--NYLVCVVEK--VIDLEG--CGNDVKLGVV 274

Query: 173 AVDVSTGDVVHGEFDDNSIRTGLEAMLISLSPNEM 277
            V+VSTGDVV+GEF+DN +R GLEAM+++L P E+
Sbjct: 275 GVEVSTGDVVYGEFNDNFMRAGLEAMILNLLPAEL 309


>ref|XP_002867605.1| hypothetical protein ARALYDRAFT_492273 [Arabidopsis lyrata subsp.
           lyrata] gi|297313441|gb|EFH43864.1| hypothetical protein
           ARALYDRAFT_492273 [Arabidopsis lyrata subsp. lyrata]
          Length = 1078

 Score = 83.2 bits (204), Expect = 3e-14
 Identities = 45/95 (47%), Positives = 66/95 (69%), Gaps = 3/95 (3%)
 Frame = +2

Query: 2   RGLSALYTRSTIEAAEDMXXXXXXXXXXXXX-NFLACVVEKELVPDH--EGKFCVKVALV 172
           RGLSALYT++T+EAAED+              NFL CVV++ +  +   E  F V+V +V
Sbjct: 204 RGLSALYTKATLEAAEDISGGGGGEEGFGAQSNFLVCVVDERVNTETGIEMSFDVRVGVV 263

Query: 173 AVDVSTGDVVHGEFDDNSIRTGLEAMLISLSPNEM 277
            V++STG+VV+GEF+DN +R+GLEA+++S SP E+
Sbjct: 264 GVEISTGEVVYGEFNDNFMRSGLEAVILSFSPAEL 298


>gb|ADT92190.1| DNA mismatch repair protein [Zea mays]
          Length = 981

 Score = 82.8 bits (203), Expect = 4e-14
 Identities = 44/92 (47%), Positives = 60/92 (65%)
 Frame = +2

Query: 2   RGLSALYTRSTIEAAEDMXXXXXXXXXXXXXNFLACVVEKELVPDHEGKFCVKVALVAVD 181
           RGLSA+YTR+TIEAA                ++L C+V+KE+         VKV LVA++
Sbjct: 197 RGLSAVYTRATIEAAAGELEGGGAAAPEEGSSYLVCIVDKEVEAAGREGLQVKVGLVAIE 256

Query: 182 VSTGDVVHGEFDDNSIRTGLEAMLISLSPNEM 277
           VSTG+VVHGEF D+  R+GLEA+L+ L+P E+
Sbjct: 257 VSTGEVVHGEFLDSDSRSGLEALLLGLAPVEV 288


>gb|ESW15390.1| hypothetical protein PHAVU_007G069100g [Phaseolus vulgaris]
          Length = 1075

 Score = 81.3 bits (199), Expect = 1e-13
 Identities = 46/97 (47%), Positives = 66/97 (68%), Gaps = 5/97 (5%)
 Frame = +2

Query: 2   RGLSALYTRSTIEAAEDMXXXXXXXXXXXXXNFLACVVEKELVPDH-----EGKFCVKVA 166
           RGLSALYT++T+EAA ++             N+L CVVEK +V +      EG   V+V 
Sbjct: 199 RGLSALYTKATLEAAPEIGGEGDGCGGES--NYLLCVVEKSVVGEKGNCGVEGGGDVRVG 256

Query: 167 LVAVDVSTGDVVHGEFDDNSIRTGLEAMLISLSPNEM 277
           +VAV++STGDVV+GEF D+ +R+ LEA+L++LSP E+
Sbjct: 257 IVAVEISTGDVVYGEFCDSFLRSALEAVLVNLSPAEL 293


>gb|ESW15389.1| hypothetical protein PHAVU_007G069100g [Phaseolus vulgaris]
          Length = 851

 Score = 81.3 bits (199), Expect = 1e-13
 Identities = 46/97 (47%), Positives = 66/97 (68%), Gaps = 5/97 (5%)
 Frame = +2

Query: 2   RGLSALYTRSTIEAAEDMXXXXXXXXXXXXXNFLACVVEKELVPDH-----EGKFCVKVA 166
           RGLSALYT++T+EAA ++             N+L CVVEK +V +      EG   V+V 
Sbjct: 199 RGLSALYTKATLEAAPEIGGEGDGCGGES--NYLLCVVEKSVVGEKGNCGVEGGGDVRVG 256

Query: 167 LVAVDVSTGDVVHGEFDDNSIRTGLEAMLISLSPNEM 277
           +VAV++STGDVV+GEF D+ +R+ LEA+L++LSP E+
Sbjct: 257 IVAVEISTGDVVYGEFCDSFLRSALEAVLVNLSPAEL 293