BLASTX nr result
ID: Zingiber24_contig00031815
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00031815
(1035 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
tpg|DAA62195.1| TPA: putative RING zinc finger domain superfamil... 71 8e-10
ref|NP_001148999.1| ubiquitin-protein ligase/ zinc ion binding p... 71 8e-10
tpg|DAA40463.1| TPA: putative RING zinc finger domain superfamil... 70 1e-09
tpg|DAA40459.1| TPA: putative RING zinc finger domain superfamil... 70 1e-09
gb|ACF86603.1| unknown [Zea mays] gi|195626322|gb|ACG34991.1| ub... 70 1e-09
ref|NP_001132715.1| uncharacterized protein LOC100194198 [Zea ma... 70 1e-09
ref|XP_002462621.1| hypothetical protein SORBIDRAFT_02g029150 [S... 69 2e-09
ref|XP_006660807.1| PREDICTED: E3 ubiquitin-protein ligase RNF4-... 68 5e-09
ref|XP_006844642.1| hypothetical protein AMTR_s00016p00232850 [A... 68 7e-09
ref|XP_004957275.1| PREDICTED: E3 ubiquitin-protein ligase RNF4-... 67 1e-08
ref|XP_003578378.1| PREDICTED: E3 ubiquitin-protein ligase compl... 66 3e-08
ref|NP_001063596.2| Os09g0504700 [Oryza sativa Japonica Group] g... 66 3e-08
ref|XP_004959982.1| PREDICTED: E3 ubiquitin-protein ligase RNF4-... 65 3e-08
gb|ABK23508.1| unknown [Picea sitchensis] gi|224284637|gb|ACN400... 64 1e-07
gb|ABK22217.1| unknown [Picea sitchensis] 63 2e-07
dbj|BAJ87005.1| predicted protein [Hordeum vulgare subsp. vulgar... 63 2e-07
gb|EEC72046.1| hypothetical protein OsI_04952 [Oryza sativa Indi... 62 4e-07
ref|NP_001045211.1| Os01g0919500 [Oryza sativa Japonica Group] g... 62 4e-07
gb|EMT00795.1| Putative histone acetyltransferase HAC-like prote... 61 6e-07
gb|EMS61457.1| putative histone acetyltransferase HAC-like 1 [Tr... 61 6e-07
>tpg|DAA62195.1| TPA: putative RING zinc finger domain superfamily protein, partial
[Zea mays]
Length = 102
Score = 70.9 bits (172), Expect = 8e-10
Identities = 29/47 (61%), Positives = 36/47 (76%)
Frame = +2
Query: 491 PIXXTCGHIFCNSCITNAIQVHHRCPTCRFSLSLNSIHRIYLPGASS 631
P TCGHIFC++CI AI+V +CPTCR L +NS+HRI+LP ASS
Sbjct: 56 PSTTTCGHIFCDTCIKQAIKVQKKCPTCRKGLKMNSVHRIFLPNASS 102
>ref|NP_001148999.1| ubiquitin-protein ligase/ zinc ion binding protein [Zea mays]
gi|195623858|gb|ACG33759.1| ubiquitin-protein ligase/
zinc ion binding protein [Zea mays]
gi|223974557|gb|ACN31466.1| unknown [Zea mays]
Length = 197
Score = 70.9 bits (172), Expect = 8e-10
Identities = 29/47 (61%), Positives = 36/47 (76%)
Frame = +2
Query: 491 PIXXTCGHIFCNSCITNAIQVHHRCPTCRFSLSLNSIHRIYLPGASS 631
P TCGHIFC++CI AI+V +CPTCR L +NS+HRI+LP ASS
Sbjct: 151 PSTTTCGHIFCDTCIKQAIKVQKKCPTCRKGLKMNSVHRIFLPNASS 197
>tpg|DAA40463.1| TPA: putative RING zinc finger domain superfamily protein [Zea
mays]
Length = 202
Score = 70.5 bits (171), Expect = 1e-09
Identities = 28/47 (59%), Positives = 35/47 (74%)
Frame = +2
Query: 491 PIXXTCGHIFCNSCITNAIQVHHRCPTCRFSLSLNSIHRIYLPGASS 631
P TCGH+FC++CI AI+V +CPTCR L +NS+HRIYLP SS
Sbjct: 156 PSTTTCGHVFCDTCIKQAIKVQKKCPTCRKGLKMNSVHRIYLPNGSS 202
>tpg|DAA40459.1| TPA: putative RING zinc finger domain superfamily protein [Zea
mays]
Length = 50
Score = 70.5 bits (171), Expect = 1e-09
Identities = 28/47 (59%), Positives = 35/47 (74%)
Frame = +2
Query: 491 PIXXTCGHIFCNSCITNAIQVHHRCPTCRFSLSLNSIHRIYLPGASS 631
P TCGH+FC++CI AI+V +CPTCR L +NS+HRIYLP SS
Sbjct: 4 PSTTTCGHVFCDTCIKQAIKVQKKCPTCRKGLKMNSVHRIYLPNGSS 50
>gb|ACF86603.1| unknown [Zea mays] gi|195626322|gb|ACG34991.1| ubiquitin-protein
ligase/ zinc ion binding protein [Zea mays]
gi|414589889|tpg|DAA40460.1| TPA: putative RING zinc
finger domain superfamily protein isoform 1 [Zea mays]
gi|414589890|tpg|DAA40461.1| TPA: putative RING zinc
finger domain superfamily protein isoform 2 [Zea mays]
gi|414589891|tpg|DAA40462.1| TPA: putative RING zinc
finger domain superfamily protein isoform 3 [Zea mays]
Length = 198
Score = 70.5 bits (171), Expect = 1e-09
Identities = 28/47 (59%), Positives = 35/47 (74%)
Frame = +2
Query: 491 PIXXTCGHIFCNSCITNAIQVHHRCPTCRFSLSLNSIHRIYLPGASS 631
P TCGH+FC++CI AI+V +CPTCR L +NS+HRIYLP SS
Sbjct: 152 PSTTTCGHVFCDTCIKQAIKVQKKCPTCRKGLKMNSVHRIYLPNGSS 198
>ref|NP_001132715.1| uncharacterized protein LOC100194198 [Zea mays]
gi|194695182|gb|ACF81675.1| unknown [Zea mays]
Length = 198
Score = 70.5 bits (171), Expect = 1e-09
Identities = 28/47 (59%), Positives = 35/47 (74%)
Frame = +2
Query: 491 PIXXTCGHIFCNSCITNAIQVHHRCPTCRFSLSLNSIHRIYLPGASS 631
P TCGH+FC++CI AI+V +CPTCR L +NS+HRIYLP SS
Sbjct: 152 PSTTTCGHVFCDTCIKQAIKVQKKCPTCRKGLKMNSVHRIYLPNGSS 198
>ref|XP_002462621.1| hypothetical protein SORBIDRAFT_02g029150 [Sorghum bicolor]
gi|241925998|gb|EER99142.1| hypothetical protein
SORBIDRAFT_02g029150 [Sorghum bicolor]
Length = 198
Score = 69.3 bits (168), Expect = 2e-09
Identities = 28/47 (59%), Positives = 35/47 (74%)
Frame = +2
Query: 491 PIXXTCGHIFCNSCITNAIQVHHRCPTCRFSLSLNSIHRIYLPGASS 631
P TCGH+FC++CI AI++ +CPTCR L +NS HRIYLP ASS
Sbjct: 152 PSTTTCGHVFCDTCIKQAIKIQKKCPTCRKGLKMNSAHRIYLPKASS 198
>ref|XP_006660807.1| PREDICTED: E3 ubiquitin-protein ligase RNF4-like [Oryza
brachyantha]
Length = 195
Score = 68.2 bits (165), Expect = 5e-09
Identities = 28/47 (59%), Positives = 33/47 (70%)
Frame = +2
Query: 491 PIXXTCGHIFCNSCITNAIQVHHRCPTCRFSLSLNSIHRIYLPGASS 631
P CGHIFC +CI AIQ+ +CPTCR SL N+ HRIYLPG+ S
Sbjct: 149 PSTTICGHIFCTNCIKQAIQIQKKCPTCRKSLRANNFHRIYLPGSDS 195
>ref|XP_006844642.1| hypothetical protein AMTR_s00016p00232850 [Amborella trichopoda]
gi|548847113|gb|ERN06317.1| hypothetical protein
AMTR_s00016p00232850 [Amborella trichopoda]
Length = 213
Score = 67.8 bits (164), Expect = 7e-09
Identities = 28/42 (66%), Positives = 33/42 (78%)
Frame = +2
Query: 506 CGHIFCNSCITNAIQVHHRCPTCRFSLSLNSIHRIYLPGASS 631
CGH+FC CIT+AIQ +CP CR LS N+IHRIYLPGA+S
Sbjct: 172 CGHLFCKPCITSAIQAQKKCPQCRRKLSNNNIHRIYLPGANS 213
>ref|XP_004957275.1| PREDICTED: E3 ubiquitin-protein ligase RNF4-like [Setaria italica]
Length = 195
Score = 67.0 bits (162), Expect = 1e-08
Identities = 28/47 (59%), Positives = 32/47 (68%)
Frame = +2
Query: 491 PIXXTCGHIFCNSCITNAIQVHHRCPTCRFSLSLNSIHRIYLPGASS 631
P CGHIFCN+CI AI+V RCPTCR L S+HRIYLP +S
Sbjct: 149 PATTPCGHIFCNTCIKQAIKVQKRCPTCRKGLRATSVHRIYLPSTAS 195
>ref|XP_003578378.1| PREDICTED: E3 ubiquitin-protein ligase complex slx8-rfp subunit
slx8-like [Brachypodium distachyon]
Length = 197
Score = 65.9 bits (159), Expect = 3e-08
Identities = 27/45 (60%), Positives = 32/45 (71%)
Frame = +2
Query: 491 PIXXTCGHIFCNSCITNAIQVHHRCPTCRFSLSLNSIHRIYLPGA 625
P CGHIFC SCI +IQV +CPTCR SL +N+ HRIYLP +
Sbjct: 149 PSTTICGHIFCTSCIKQSIQVQKKCPTCRKSLRMNNFHRIYLPNS 193
>ref|NP_001063596.2| Os09g0504700 [Oryza sativa Japonica Group]
gi|215678960|dbj|BAG96390.1| unnamed protein product
[Oryza sativa Japonica Group]
gi|215707233|dbj|BAG93693.1| unnamed protein product
[Oryza sativa Japonica Group]
gi|255679040|dbj|BAF25510.2| Os09g0504700 [Oryza sativa
Japonica Group]
Length = 191
Score = 65.9 bits (159), Expect = 3e-08
Identities = 27/47 (57%), Positives = 32/47 (68%)
Frame = +2
Query: 491 PIXXTCGHIFCNSCITNAIQVHHRCPTCRFSLSLNSIHRIYLPGASS 631
P CGHIFC +CI AIQ+ +CPTCR SL N+ HRIYLP + S
Sbjct: 145 PSTTICGHIFCTTCIKQAIQIQKKCPTCRKSLRANNFHRIYLPNSDS 191
>ref|XP_004959982.1| PREDICTED: E3 ubiquitin-protein ligase RNF4-like [Setaria italica]
Length = 194
Score = 65.5 bits (158), Expect = 3e-08
Identities = 26/47 (55%), Positives = 32/47 (68%)
Frame = +2
Query: 491 PIXXTCGHIFCNSCITNAIQVHHRCPTCRFSLSLNSIHRIYLPGASS 631
P CGHIFCN+CI AI++ +CPTCR L S+HRIYLP +S
Sbjct: 148 PATTPCGHIFCNTCIKQAIKIQKKCPTCRKGLRATSVHRIYLPSTAS 194
>gb|ABK23508.1| unknown [Picea sitchensis] gi|224284637|gb|ACN40051.1| unknown
[Picea sitchensis] gi|224285742|gb|ACN40586.1| unknown
[Picea sitchensis]
Length = 231
Score = 63.9 bits (154), Expect = 1e-07
Identities = 26/39 (66%), Positives = 31/39 (79%)
Frame = +2
Query: 506 CGHIFCNSCITNAIQVHHRCPTCRFSLSLNSIHRIYLPG 622
CGHIFC SCI +AIQ +CPTCR LS+ +IHRI+LPG
Sbjct: 190 CGHIFCRSCIMSAIQFQKKCPTCRRKLSMANIHRIFLPG 228
>gb|ABK22217.1| unknown [Picea sitchensis]
Length = 203
Score = 63.2 bits (152), Expect = 2e-07
Identities = 25/41 (60%), Positives = 32/41 (78%)
Frame = +2
Query: 506 CGHIFCNSCITNAIQVHHRCPTCRFSLSLNSIHRIYLPGAS 628
CGHIFC CITNAI + RCPTCR L+++SIHRIY+ ++
Sbjct: 162 CGHIFCKKCITNAIHLWKRCPTCRKKLTISSIHRIYISSST 202
>dbj|BAJ87005.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326525537|dbj|BAJ88815.1| predicted protein [Hordeum
vulgare subsp. vulgare] gi|326532854|dbj|BAJ89272.1|
predicted protein [Hordeum vulgare subsp. vulgare]
Length = 210
Score = 62.8 bits (151), Expect = 2e-07
Identities = 25/46 (54%), Positives = 30/46 (65%)
Frame = +2
Query: 491 PIXXTCGHIFCNSCITNAIQVHHRCPTCRFSLSLNSIHRIYLPGAS 628
P CGHIFC +CI AIQ +CPTCR L +N+ HRIYLP +
Sbjct: 164 PATTMCGHIFCTNCIKQAIQFQKKCPTCRKHLKMNNFHRIYLPNTA 209
>gb|EEC72046.1| hypothetical protein OsI_04952 [Oryza sativa Indica Group]
Length = 241
Score = 62.0 bits (149), Expect = 4e-07
Identities = 24/45 (53%), Positives = 30/45 (66%)
Frame = +2
Query: 491 PIXXTCGHIFCNSCITNAIQVHHRCPTCRFSLSLNSIHRIYLPGA 625
P CGHIFC CI +IQ +CPTCR L++N+ HR+YLP A
Sbjct: 196 PSSTICGHIFCKQCIKASIQAQKKCPTCRRKLTMNNFHRVYLPSA 240
>ref|NP_001045211.1| Os01g0919500 [Oryza sativa Japonica Group]
gi|57899845|dbj|BAD87629.1| unknown protein [Oryza
sativa Japonica Group] gi|113534742|dbj|BAF07125.1|
Os01g0919500 [Oryza sativa Japonica Group]
gi|215740758|dbj|BAG97414.1| unnamed protein product
[Oryza sativa Japonica Group]
gi|215765198|dbj|BAG86895.1| unnamed protein product
[Oryza sativa Japonica Group]
gi|222619766|gb|EEE55898.1| hypothetical protein
OsJ_04562 [Oryza sativa Japonica Group]
Length = 241
Score = 62.0 bits (149), Expect = 4e-07
Identities = 24/45 (53%), Positives = 30/45 (66%)
Frame = +2
Query: 491 PIXXTCGHIFCNSCITNAIQVHHRCPTCRFSLSLNSIHRIYLPGA 625
P CGHIFC CI +IQ +CPTCR L++N+ HR+YLP A
Sbjct: 196 PSSTICGHIFCKQCIKASIQAQKKCPTCRRKLTMNNFHRVYLPSA 240
>gb|EMT00795.1| Putative histone acetyltransferase HAC-like protein 1 [Aegilops
tauschii]
Length = 327
Score = 61.2 bits (147), Expect = 6e-07
Identities = 23/38 (60%), Positives = 29/38 (76%)
Frame = +2
Query: 506 CGHIFCNSCITNAIQVHHRCPTCRFSLSLNSIHRIYLP 619
CGHIFC CI +IQ +CPTCR +L++NS HR+YLP
Sbjct: 287 CGHIFCQKCIQASIQAQSKCPTCRRTLTMNSFHRVYLP 324
>gb|EMS61457.1| putative histone acetyltransferase HAC-like 1 [Triticum urartu]
Length = 289
Score = 61.2 bits (147), Expect = 6e-07
Identities = 23/38 (60%), Positives = 29/38 (76%)
Frame = +2
Query: 506 CGHIFCNSCITNAIQVHHRCPTCRFSLSLNSIHRIYLP 619
CGHIFC CI +IQ +CPTCR +L++NS HR+YLP
Sbjct: 249 CGHIFCQKCIQASIQAQSKCPTCRRTLTMNSFHRVYLP 286