BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00031772
         (1299 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002512787.1| pentatricopeptide repeat-containing protein,...   394   e-107
gb|EXB41428.1| hypothetical protein L484_007578 [Morus notabilis]     393   e-106
ref|XP_006468953.1| PREDICTED: pentatricopeptide repeat-containi...   387   e-105
ref|XP_006446854.1| hypothetical protein CICLE_v10018065mg [Citr...   387   e-105
ref|XP_002876985.1| pentatricopeptide repeat-containing protein ...   365   2e-98
ref|XP_004159154.1| PREDICTED: uncharacterized protein LOC101226...   365   2e-98
ref|XP_004145727.1| PREDICTED: uncharacterized protein LOC101212...   365   2e-98
ref|XP_006291116.1| hypothetical protein CARUB_v10017228mg [Caps...   362   2e-97
ref|NP_189297.1| pentatricopeptide repeat-containing protein [Ar...   361   3e-97
ref|XP_006395538.1| hypothetical protein EUTSA_v10004197mg [Eutr...   360   7e-97
ref|XP_006844721.1| hypothetical protein AMTR_s00016p00252780 [A...   358   4e-96
gb|EMJ18298.1| hypothetical protein PRUPE_ppa022877mg, partial [...   355   2e-95
ref|XP_003548483.1| PREDICTED: pentatricopeptide repeat-containi...   347   8e-93
ref|XP_003624556.1| Pentatricopeptide repeat-containing protein ...   343   7e-92
gb|ESW33780.1| hypothetical protein PHAVU_001G097900g [Phaseolus...   341   3e-91
ref|XP_003553320.1| PREDICTED: pentatricopeptide repeat-containi...   334   5e-89
gb|EPS63217.1| hypothetical protein M569_11569 [Genlisea aurea]       318   2e-84
ref|XP_002279137.1| PREDICTED: pentatricopeptide repeat-containi...   291   4e-76
ref|XP_002263755.1| PREDICTED: pentatricopeptide repeat-containi...   290   7e-76
ref|XP_004289184.1| PREDICTED: pentatricopeptide repeat-containi...   287   8e-75

>ref|XP_002512787.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223547798|gb|EEF49290.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 480

 Score =  394 bits (1012), Expect = e-107
 Identities = 202/383 (52%), Positives = 258/383 (67%)
 Frame = +2

Query: 149  KQSHARILRSGLSHDPSVLPSLLRIYSSHRSFDLAARLLASFPNPPTIAWNLLIRXXXXX 328
            K   A+I+R+ LS D  ++  LLR+  S++  D A  +     NP T  WN +IR     
Sbjct: 49   KLVQAKIIRNNLSDDQLLVRKLLRLCFSYQKVDYATLIFDQIQNPHTFTWNFMIRAYNYN 108

Query: 329  XXXXXXXXXFDQMLARGVLPDKFTFPFVVTACSIIANLDKGEEVHASAIKSGFSRDPFLQ 508
                     ++ M+  G  PDKFTFPFV+ AC   + LDKG+EVH  AIK+GF +D FL 
Sbjct: 109  GNSQQALLLYNLMICEGFSPDKFTFPFVIKACLDHSALDKGKEVHGFAIKTGFWKDTFLS 168

Query: 509  NCLIHFYFRCGKPVDARKVFDRMPVRSVVSWTALLSGLVASGEIEDARAVFEAMPARNVV 688
            N L+  YF+CG    ARK+FD+M VRSVVSWT  ++GLVA GE++ ARA F+ MP RNVV
Sbjct: 169  NTLMDLYFKCGDLDYARKLFDKMAVRSVVSWTTFVAGLVACGELDTARAAFDEMPMRNVV 228

Query: 689  SWTAMIDCYARNGRPDEAFGLFRRMQEEDVRPNNFTIVALLIACKDLGSLELCRRVHEFA 868
            SWTAMI+ Y +N RP EAF LF+RMQ  +VRPN FT+V LL AC +LGSLEL RR+HE+A
Sbjct: 229  SWTAMINGYVKNQRPQEAFELFQRMQLANVRPNGFTLVGLLRACTELGSLELGRRIHEYA 288

Query: 869  QKNGGLDKSVYIGTALVDTYSNCGSLEDAQRVFDQMPEKSLATWNSMITSLGVHGQGTRA 1048
             +N G    V++GTAL+D YS CGS+EDA++VF++M +KSLATWNSMITSLGVHG G  A
Sbjct: 289  LEN-GFKVGVFLGTALIDMYSKCGSIEDAKKVFEEMQKKSLATWNSMITSLGVHGFGKEA 347

Query: 1049 LALFKTMRRSNLQPDGITFVGVLSACLRKGLVAEGLRLFGAMVERYGIDPCGEHYACLVR 1228
            LALF  M  +N++PD ITFVGVL AC+    V  G R F  M E YGI P  EHY C++ 
Sbjct: 348  LALFAQMEEANVRPDAITFVGVLFACVNTNNVEAGYRYFKYMTEHYGITPMLEHYTCMIE 407

Query: 1229 LLDCADESDEVKEMVNDLVVKLD 1297
            L   A   +EV E+VN + +KL+
Sbjct: 408  LYTRAAMLNEVSELVNSMPMKLN 430


>gb|EXB41428.1| hypothetical protein L484_007578 [Morus notabilis]
          Length = 428

 Score =  393 bits (1009), Expect = e-106
 Identities = 205/381 (53%), Positives = 261/381 (68%), Gaps = 1/381 (0%)
 Frame = +2

Query: 149  KQSHARILRSGLSHDPSVLPSLLRIYSSHRSFDLAARLLA-SFPNPPTIAWNLLIRXXXX 325
            KQ HA+I+RSGLSHD  +L  +L+  S+  + D AA +     P P T  WNL+IR    
Sbjct: 39   KQIHAKIIRSGLSHDQLLLRKMLQFCSTSGNMDYAALVFRHQIPYPLTFTWNLMIRAYTL 98

Query: 326  XXXXXXXXXXFDQMLARGVLPDKFTFPFVVTACSIIANLDKGEEVHASAIKSGFSRDPFL 505
                      F  M +RG  PDKFTFPFV+ AC+  +    G+ VH  AIK+ FS D F+
Sbjct: 99   NASPRQALLLFTLMTSRGFPPDKFTFPFVIKACTASSAFRPGDAVHGLAIKARFSGDIFV 158

Query: 506  QNCLIHFYFRCGKPVDARKVFDRMPVRSVVSWTALLSGLVASGEIEDARAVFEAMPARNV 685
            QN L+ FYF+CG     RKVFD+M VR++VSWT +++GLV SG++  ARA+FE MPA+NV
Sbjct: 159  QNTLMDFYFKCGDAHSGRKVFDKMRVRNLVSWTTMVTGLVGSGDLRAARAIFEQMPAKNV 218

Query: 686  VSWTAMIDCYARNGRPDEAFGLFRRMQEEDVRPNNFTIVALLIACKDLGSLELCRRVHEF 865
            VSWT MID Y  + +P+EAF LFRRMQ ++V PN FT+V+LL AC +LGSL+L R VH+F
Sbjct: 219  VSWTIMIDGYVEDRQPEEAFKLFRRMQLDNVSPNEFTLVSLLKACTELGSLKLGRWVHDF 278

Query: 866  AQKNGGLDKSVYIGTALVDTYSNCGSLEDAQRVFDQMPEKSLATWNSMITSLGVHGQGTR 1045
            A KN G +  V+ GTAL+DTYS CGSLEDA+RVFD+M  KS+ATWNSMITSLGVHG G  
Sbjct: 279  ALKN-GFELDVFFGTALIDTYSKCGSLEDARRVFDKMQAKSIATWNSMITSLGVHGFGEE 337

Query: 1046 ALALFKTMRRSNLQPDGITFVGVLSACLRKGLVAEGLRLFGAMVERYGIDPCGEHYACLV 1225
            ALALF  M R N++PD ITFVG+LSACL+K  V++  + F  M +RY I P  EHY C++
Sbjct: 338  ALALFAEMERQNVRPDEITFVGILSACLQKNSVSDCRKYFEYMNKRYRILPIKEHYICMI 397

Query: 1226 RLLDCADESDEVKEMVNDLVV 1288
             L   A   DEV  +VN + V
Sbjct: 398  ELYSRAGMLDEVVRLVNAMPV 418


>ref|XP_006468953.1| PREDICTED: pentatricopeptide repeat-containing protein At3g26630,
            chloroplastic-like isoform X1 [Citrus sinensis]
            gi|568829286|ref|XP_006468954.1| PREDICTED:
            pentatricopeptide repeat-containing protein At3g26630,
            chloroplastic-like isoform X2 [Citrus sinensis]
            gi|568829288|ref|XP_006468955.1| PREDICTED:
            pentatricopeptide repeat-containing protein At3g26630,
            chloroplastic-like isoform X3 [Citrus sinensis]
          Length = 435

 Score =  387 bits (994), Expect = e-105
 Identities = 199/383 (51%), Positives = 255/383 (66%)
 Frame = +2

Query: 149  KQSHARILRSGLSHDPSVLPSLLRIYSSHRSFDLAARLLASFPNPPTIAWNLLIRXXXXX 328
            K  HA+I+R GLS+D  ++  LL + S +   D A  + +    P    WNL+IR     
Sbjct: 47   KLIHAKIIRHGLSNDQLLVRKLLDLCSFYGKTDHALLVFSQIQCPHVFTWNLMIRALTIN 106

Query: 329  XXXXXXXXXFDQMLARGVLPDKFTFPFVVTACSIIANLDKGEEVHASAIKSGFSRDPFLQ 508
                     ++ M+  G  PDKFTFPFV+ AC     ++KG+EVH  A+K+GFSRD F+Q
Sbjct: 107  GSSQQALLLYNLMICNGFRPDKFTFPFVIKACVASLAIEKGKEVHGLAVKAGFSRDMFVQ 166

Query: 509  NCLIHFYFRCGKPVDARKVFDRMPVRSVVSWTALLSGLVASGEIEDARAVFEAMPARNVV 688
            N L+  YF+CG     R VFD+M VRSVVSWT ++SGL ASG+++ AR VFE M  RNVV
Sbjct: 167  NTLMDLYFKCGDVDGGRMVFDKMRVRSVVSWTTMISGLAASGDLDAARRVFEQMQTRNVV 226

Query: 689  SWTAMIDCYARNGRPDEAFGLFRRMQEEDVRPNNFTIVALLIACKDLGSLELCRRVHEFA 868
            SWTAMI+ Y RN R  EAF LF+RM  ++VRPN FT+V+LL AC +L SL+L   +H+FA
Sbjct: 227  SWTAMINAYVRNERAQEAFELFQRMLLDNVRPNEFTLVSLLQACTELRSLKLGNWIHDFA 286

Query: 869  QKNGGLDKSVYIGTALVDTYSNCGSLEDAQRVFDQMPEKSLATWNSMITSLGVHGQGTRA 1048
             KNG +   VY+GTAL+D YS CGSLEDA++VFD+M  K+LATWNSMITSLGVHG G  A
Sbjct: 287  LKNGFV-LGVYLGTALIDMYSKCGSLEDARKVFDKMEIKNLATWNSMITSLGVHGHGEEA 345

Query: 1049 LALFKTMRRSNLQPDGITFVGVLSACLRKGLVAEGLRLFGAMVERYGIDPCGEHYACLVR 1228
            LALF  M  +N+ PD ITFVGVL AC+ +  V EG   F  M E YGI P  EHY CL+ 
Sbjct: 346  LALFAQMENANVHPDAITFVGVLCACVHENNVNEGYSYFRYMREHYGISPIEEHYTCLIE 405

Query: 1229 LLDCADESDEVKEMVNDLVVKLD 1297
            L +CA   DEV E++N ++  L+
Sbjct: 406  LYNCAKMKDEVSEVLNTILEDLN 428


>ref|XP_006446854.1| hypothetical protein CICLE_v10018065mg [Citrus clementina]
            gi|557549465|gb|ESR60094.1| hypothetical protein
            CICLE_v10018065mg [Citrus clementina]
          Length = 438

 Score =  387 bits (994), Expect = e-105
 Identities = 201/378 (53%), Positives = 252/378 (66%)
 Frame = +2

Query: 149  KQSHARILRSGLSHDPSVLPSLLRIYSSHRSFDLAARLLASFPNPPTIAWNLLIRXXXXX 328
            K  HA+I+R GLS+D  ++  LL + S +   D A  + +    P    WNL+IR     
Sbjct: 47   KLIHAKIIRHGLSNDQLLVRKLLDLCSFYGKTDHALLVFSQIQCPHVFTWNLMIRALTIN 106

Query: 329  XXXXXXXXXFDQMLARGVLPDKFTFPFVVTACSIIANLDKGEEVHASAIKSGFSRDPFLQ 508
                     ++ M+  G  PDKFTFPFV  AC     ++KG+EVH  A+K+GFSRD F+Q
Sbjct: 107  GSSRQALLLYNLMICNGFRPDKFTFPFVFKACITSLAIEKGKEVHGLAVKAGFSRDMFVQ 166

Query: 509  NCLIHFYFRCGKPVDARKVFDRMPVRSVVSWTALLSGLVASGEIEDARAVFEAMPARNVV 688
            N L+  YF+CG     RKVFD+M VRSVVSWT ++SGL ASG+++ AR VFE M  RNVV
Sbjct: 167  NTLMDLYFKCGDVNGGRKVFDKMRVRSVVSWTTMISGLAASGDLDAARRVFEQMQTRNVV 226

Query: 689  SWTAMIDCYARNGRPDEAFGLFRRMQEEDVRPNNFTIVALLIACKDLGSLELCRRVHEFA 868
            SWTAMI+ Y RN R  EAF LF+RM  ++VRPN FT+V+LL AC +LGSL+L   +H+FA
Sbjct: 227  SWTAMINAYVRNERAHEAFELFQRMLLDNVRPNEFTLVSLLQACTELGSLKLGNWIHDFA 286

Query: 869  QKNGGLDKSVYIGTALVDTYSNCGSLEDAQRVFDQMPEKSLATWNSMITSLGVHGQGTRA 1048
             KNG +   VY+GTAL+D YS CGSLEDA++VFD+M  K+LATWNSMITSLGVHG G  A
Sbjct: 287  LKNGFV-LGVYLGTALIDMYSKCGSLEDARKVFDKMEIKNLATWNSMITSLGVHGHGEEA 345

Query: 1049 LALFKTMRRSNLQPDGITFVGVLSACLRKGLVAEGLRLFGAMVERYGIDPCGEHYACLVR 1228
            LALF  M  +N+QPD ITFVGVL AC+    V EG R F  M E YGI P  EHY CL+ 
Sbjct: 346  LALFAQMENANVQPDAITFVGVLCACVHTNNVNEGYRYFRYMREHYGISPIEEHYTCLIE 405

Query: 1229 LLDCADESDEVKEMVNDL 1282
            L + A   DEV E +N +
Sbjct: 406  LYNRAKMKDEVSEELNTI 423



 Score = 90.5 bits (223), Expect = 1e-15
 Identities = 57/246 (23%), Positives = 102/246 (41%)
 Frame = +2

Query: 245 DLAARLLASFPNPPTIAWNLLIRXXXXXXXXXXXXXXFDQMLARGVLPDKFTFPFVVTAC 424
           D A R+         ++W  +I               F +ML   V P++FT   ++ AC
Sbjct: 211 DAARRVFEQMQTRNVVSWTAMINAYVRNERAHEAFELFQRMLLDNVRPNEFTLVSLLQAC 270

Query: 425 SIIANLDKGEEVHASAIKSGFSRDPFLQNCLIHFYFRCGKPVDARKVFDRMPVRSVVSWT 604
           + + +L  G  +H  A+K+GF    +L   LI  Y +CG                     
Sbjct: 271 TELGSLKLGNWIHDFALKNGFVLGVYLGTALIDMYSKCGS-------------------- 310

Query: 605 ALLSGLVASGEIEDARAVFEAMPARNVVSWTAMIDCYARNGRPDEAFGLFRRMQEEDVRP 784
                      +EDAR VF+ M  +N+ +W +MI     +G  +EA  LF +M+  +V+P
Sbjct: 311 -----------LEDARKVFDKMEIKNLATWNSMITSLGVHGHGEEALALFAQMENANVQP 359

Query: 785 NNFTIVALLIACKDLGSLELCRRVHEFAQKNGGLDKSVYIGTALVDTYSNCGSLEDAQRV 964
           +  T V +L AC    ++    R   + +++ G+       T L++ Y+     ++    
Sbjct: 360 DAITFVGVLCACVHTNNVNEGYRYFRYMREHYGISPIEEHYTCLIELYNRAKMKDEVSEE 419

Query: 965 FDQMPE 982
            + + E
Sbjct: 420 LNTISE 425


>ref|XP_002876985.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
            subsp. lyrata] gi|297322823|gb|EFH53244.1|
            pentatricopeptide repeat-containing protein [Arabidopsis
            lyrata subsp. lyrata]
          Length = 451

 Score =  365 bits (938), Expect = 2e-98
 Identities = 190/377 (50%), Positives = 248/377 (65%), Gaps = 1/377 (0%)
 Frame = +2

Query: 149  KQSHARILRSGLSHDPSVLPSLLRIYSSHRSFDLAARLLASFPNPPTIAWNLLIRXXXXX 328
            KQ H +I++  L++D  ++  L+ + SS      A+ +     +P T  WNL+IR     
Sbjct: 37   KQIHTKIIKHNLTNDQLLVRQLISVSSSFGETQYASLVFNQLQSPSTFTWNLMIRSLSLN 96

Query: 329  XXXXXXXXXFDQMLARGVLPDKFTFPFVVTACSIIANLDKGEEVHASAIKSGFSRDPFLQ 508
                     F  ML+     DKFTFPFV+ AC   ++L  G +VH  AIK+GF  D F Q
Sbjct: 97   HKPREALLLFILMLSHQPQFDKFTFPFVIKACLASSSLRLGTQVHGLAIKAGFFNDVFFQ 156

Query: 509  NCLIHFYFRCGKPVDARKVFDRMPVRSVVSWTALLSGLVASGEIEDARAVFEAMPARNVV 688
            N L+  YF+CGKP   RKVFD+MP RS+VSWT +L GLV++ +++ A  VF  MP RNVV
Sbjct: 157  NTLMDLYFKCGKPDCGRKVFDKMPGRSIVSWTTMLYGLVSNSQLDSAEIVFNQMPTRNVV 216

Query: 689  SWTAMIDCYARNGRPDEAFGLFRRMQEEDVRPNNFTIVALLIACKDLGSLELCRRVHEFA 868
            SWTAMI  Y +N RPDEAF LFRRMQ +DV+PN FTIV LL A   LGSL + R VH++A
Sbjct: 217  SWTAMITAYVKNRRPDEAFQLFRRMQVDDVKPNEFTIVNLLQASTQLGSLSMGRWVHDYA 276

Query: 869  QKNGGLDKSVYIGTALVDTYSNCGSLEDAQRVFDQMPEKSLATWNSMITSLGVHGQGTRA 1048
             KNG +    Y+GTAL+D YS CGSL+DA++VFD M  KSLATWNSMITSLGVHG G  A
Sbjct: 277  HKNGFV-LDCYLGTALIDMYSKCGSLQDARKVFDVMQSKSLATWNSMITSLGVHGCGEEA 335

Query: 1049 LALFKTM-RRSNLQPDGITFVGVLSACLRKGLVAEGLRLFGAMVERYGIDPCGEHYACLV 1225
            L LF+ M   ++++PD ITFVGVLSAC   G V +GLR F  M++ YGI P  EH AC++
Sbjct: 336  LYLFEEMEEEASVEPDAITFVGVLSACANTGNVKDGLRYFTRMIQVYGISPIREHNACMI 395

Query: 1226 RLLDCADESDEVKEMVN 1276
            +LL+ A E ++  + ++
Sbjct: 396  QLLEQALEMEKASDSMD 412


>ref|XP_004159154.1| PREDICTED: uncharacterized protein LOC101226880 [Cucumis sativus]
          Length = 1725

 Score =  365 bits (937), Expect = 2e-98
 Identities = 181/370 (48%), Positives = 247/370 (66%)
 Frame = +2

Query: 149  KQSHARILRSGLSHDPSVLPSLLRIYSSHRSFDLAARLLASFPNPPTIAWNLLIRXXXXX 328
            +Q HA+I+RSGLS+D  +   L+ +YS+H     A  L     NP T  WNL+IR     
Sbjct: 44   RQIHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNPCTFTWNLIIRANTIN 103

Query: 329  XXXXXXXXXFDQMLARGVLPDKFTFPFVVTACSIIANLDKGEEVHASAIKSGFSRDPFLQ 508
                     +  M+ +G+  DKFTFPFV+ AC+   ++D G+ VH S IK GFS D F+Q
Sbjct: 104  GLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSLIKYGFSGDVFVQ 163

Query: 509  NCLIHFYFRCGKPVDARKVFDRMPVRSVVSWTALLSGLVASGEIEDARAVFEAMPARNVV 688
            N LI FYF+CG    A KVF++M VR+VVSWT ++SGL++ G++++AR +F+ +P++NVV
Sbjct: 164  NNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQEARRIFDEIPSKNVV 223

Query: 689  SWTAMIDCYARNGRPDEAFGLFRRMQEEDVRPNNFTIVALLIACKDLGSLELCRRVHEFA 868
            SWTAMI+ Y RN +P+EA  LF+RMQ E++ PN +T+V+L+ AC ++G L L R +H++A
Sbjct: 224  SWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTEMGILTLGRGIHDYA 283

Query: 869  QKNGGLDKSVYIGTALVDTYSNCGSLEDAQRVFDQMPEKSLATWNSMITSLGVHGQGTRA 1048
             KN  ++  VY+GTAL+D YS CGS++DA  VF+ MP KSL TWNSMITSLGVHG G  A
Sbjct: 284  IKN-CIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKSLPTWNSMITSLGVHGLGQEA 342

Query: 1049 LALFKTMRRSNLQPDGITFVGVLSACLRKGLVAEGLRLFGAMVERYGIDPCGEHYACLVR 1228
            L LF  M R N++PD ITF+GVL AC+    V EG   F  M + YGI P  EHY C+  
Sbjct: 343  LNLFSEMERVNVKPDAITFIGVLCACVHIKNVKEGCAYFTRMTQHYGIAPIPEHYECMTE 402

Query: 1229 LLDCADESDE 1258
            L   ++  DE
Sbjct: 403  LYARSNNLDE 412



 Score =  187 bits (474), Expect = 1e-44
 Identities = 118/414 (28%), Positives = 195/414 (47%), Gaps = 79/414 (19%)
 Frame = +2

Query: 293  AWNLLIRXXXXXXXXXXXXXXFDQMLARGVLPDKFTFPFVVTACSIIANLDKGEEVHASA 472
            +WN +I               F  +   G++P + +FP  + +CS + +L  G   H  A
Sbjct: 1109 SWNSVIADLARGGDSVEALRAFSSLRKLGLIPTRSSFPCTIKSCSALCDLVSGRMSHQQA 1168

Query: 473  IKSGFSRDPFLQNCLIHFYFRCGKPVDARKVFDRMPVRSVVSWTALLSGLVASGEIEDAR 652
               GF  D F+ + LI  Y +CG+  DAR +FD +P+R+VVSWT++++G V + + ++A 
Sbjct: 1169 FVFGFETDLFVSSALIDMYSKCGQLKDARALFDEIPLRNVVSWTSMITGYVQNEQADNAL 1228

Query: 653  AVFE-------------AMPARNVVS---------------------------------- 691
             +F+              +P  +VV                                   
Sbjct: 1229 LLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSGKGITEGVHGFVVKKGFDGSIGV 1288

Query: 692  WTAMIDCYARNGRPDEAFGLFRRMQEED-------------------------------- 775
               ++D YA+ G+P  +  +F  M+E+D                                
Sbjct: 1289 GNTLMDAYAKCGQPLVSKKVFDWMEEKDDISWNSMIAVYAQSGLSGEALEVFHGMVRHVG 1348

Query: 776  VRPNNFTIVALLIACKDLGSLELCRRVHEFAQKNGGLDKSVYIGTALVDTYSNCGSLEDA 955
            VR N  T+ A+L+AC   G+L   + +H+   K   L+ +V +GT+++D Y  CG +E A
Sbjct: 1349 VRYNAVTLSAVLLACAHAGALRAGKCIHDQVIKM-DLEYNVCVGTSIIDMYCKCGRVEMA 1407

Query: 956  QRVFDQMPEKSLATWNSMITSLGVHGQGTRALALFKTMRRSNLQPDGITFVGVLSACLRK 1135
            ++ FD+M EK++ +W +M+   G+HG+   AL +F  M R+ ++P+ ITFV VL+AC   
Sbjct: 1408 KKTFDRMKEKNVKSWTAMVAGYGMHGRAKEALDIFYKMVRAGVKPNYITFVSVLAACSHA 1467

Query: 1136 GLVAEGLRLFGAMVERYGIDPCGEHYACLVRLLDCADESDEVKEMVNDLVVKLD 1297
            GLV EG   F AM  +Y I+P  EHY C+V L   A   +E   ++  + +K D
Sbjct: 1468 GLVEEGWHWFNAMKHKYDIEPGIEHYGCMVDLFGRAGCLNEAYNLIKRMKMKPD 1521



 Score = 85.5 bits (210), Expect = 4e-14
 Identities = 57/173 (32%), Positives = 88/173 (50%), Gaps = 11/173 (6%)
 Frame = +2

Query: 680  NVVSWTAMIDCYARNGRPDEAFGLFRRMQEEDVRPNNFTIVALLIACKDLGSLELCRRVH 859
            NV SW ++I   AR G   EA   F  +++  + P   +    + +C  L  L   R  H
Sbjct: 1106 NVHSWNSVIADLARGGDSVEALRAFSSLRKLGLIPTRSSFPCTIKSCSALCDLVSGRMSH 1165

Query: 860  EFAQKNGGLDKSVYIGTALVDTYSNCGSLEDAQRVFDQMPEKSLATWNSMITSLGVHGQG 1039
            + A   G  +  +++ +AL+D YS CG L+DA+ +FD++P +++ +W SMIT    + Q 
Sbjct: 1166 QQAFVFG-FETDLFVSSALIDMYSKCGQLKDARALFDEIPLRNVVSWTSMITGYVQNEQA 1224

Query: 1040 TRALALFKTMRR--------SNLQPDGITFVGVLSACLR---KGLVAEGLRLF 1165
              AL LFK            +N+  D +  V VLSAC R   KG + EG+  F
Sbjct: 1225 DNALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSGKG-ITEGVHGF 1276



 Score = 80.9 bits (198), Expect = 1e-12
 Identities = 70/323 (21%), Positives = 121/323 (37%), Gaps = 2/323 (0%)
 Frame = +2

Query: 158  HARILRSGLSHDPSVLPSLLRIYSSHRSFDLAARLLASFPNPPTIAWNLLIRXXXXXXXX 337
            H  +++ G      V  +L+  Y+      ++ ++         I+WN +I         
Sbjct: 1274 HGFVVKKGFDGSIGVGNTLMDAYAKCGQPLVSKKVFDWMEEKDDISWNSMIAVYAQSGLS 1333

Query: 338  XXXXXXFDQMLAR-GVLPDKFTFPFVVTACSIIANLDKGEEVHASAIKSGFSRDPFLQNC 514
                  F  M+   GV  +  T   V+ AC+    L  G+ +H   IK     +  +   
Sbjct: 1334 GEALEVFHGMVRHVGVRYNAVTLSAVLLACAHAGALRAGKCIHDQVIKMDLEYNVCVGTS 1393

Query: 515  LIHFYFRCGKPVDARKVFDRMPVRSVVSWTALLSGLVASGEIEDARAVFEAMPARNVVSW 694
            +I  Y +CG+                               +E A+  F+ M  +NV SW
Sbjct: 1394 IIDMYCKCGR-------------------------------VEMAKKTFDRMKEKNVKSW 1422

Query: 695  TAMIDCYARNGRPDEAFGLFRRMQEEDVRPNNFTIVALLIACKDLGSLELCRRVHEFAQK 874
            TAM+  Y  +GR  EA  +F +M    V+PN  T V++L AC   G +E         + 
Sbjct: 1423 TAMVAGYGMHGRAKEALDIFYKMVRAGVKPNYITFVSVLAACSHAGLVEEGWHWFNAMKH 1482

Query: 875  NGGLDKSVYIGTALVDTYSNCGSLEDAQRVFDQMPEK-SLATWNSMITSLGVHGQGTRAL 1051
               ++  +     +VD +   G L +A  +  +M  K     W S++ +  +H      L
Sbjct: 1483 KYDIEPGIEHYGCMVDLFGRAGCLNEAYNLIKRMKMKPDFVVWGSLLGACRIHKNVD--L 1540

Query: 1052 ALFKTMRRSNLQPDGITFVGVLS 1120
                  +   L PD   +  +LS
Sbjct: 1541 GEIAAQKLFELDPDNCGYYVLLS 1563


>ref|XP_004145727.1| PREDICTED: uncharacterized protein LOC101212001 [Cucumis sativus]
          Length = 2598

 Score =  365 bits (937), Expect = 2e-98
 Identities = 181/370 (48%), Positives = 247/370 (66%)
 Frame = +2

Query: 149  KQSHARILRSGLSHDPSVLPSLLRIYSSHRSFDLAARLLASFPNPPTIAWNLLIRXXXXX 328
            +Q HA+I+RSGLS+D  +   L+ +YS+H     A  L     NP T  WNL+IR     
Sbjct: 44   RQIHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNPCTFTWNLIIRANTIN 103

Query: 329  XXXXXXXXXFDQMLARGVLPDKFTFPFVVTACSIIANLDKGEEVHASAIKSGFSRDPFLQ 508
                     +  M+ +G+  DKFTFPFV+ AC+   ++D G+ VH S IK GFS D F+Q
Sbjct: 104  GLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSLIKYGFSGDVFVQ 163

Query: 509  NCLIHFYFRCGKPVDARKVFDRMPVRSVVSWTALLSGLVASGEIEDARAVFEAMPARNVV 688
            N LI FYF+CG    A KVF++M VR+VVSWT ++SGL++ G++++AR +F+ +P++NVV
Sbjct: 164  NNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQEARRIFDEIPSKNVV 223

Query: 689  SWTAMIDCYARNGRPDEAFGLFRRMQEEDVRPNNFTIVALLIACKDLGSLELCRRVHEFA 868
            SWTAMI+ Y RN +P+EA  LF+RMQ E++ PN +T+V+L+ AC ++G L L R +H++A
Sbjct: 224  SWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTEMGILTLGRGIHDYA 283

Query: 869  QKNGGLDKSVYIGTALVDTYSNCGSLEDAQRVFDQMPEKSLATWNSMITSLGVHGQGTRA 1048
             KN  ++  VY+GTAL+D YS CGS++DA  VF+ MP KSL TWNSMITSLGVHG G  A
Sbjct: 284  IKN-CIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKSLPTWNSMITSLGVHGLGQEA 342

Query: 1049 LALFKTMRRSNLQPDGITFVGVLSACLRKGLVAEGLRLFGAMVERYGIDPCGEHYACLVR 1228
            L LF  M R N++PD ITF+GVL AC+    V EG   F  M + YGI P  EHY C+  
Sbjct: 343  LNLFSEMERVNVKPDAITFIGVLCACVHIKNVKEGCAYFTRMTQHYGIAPIPEHYECMTE 402

Query: 1229 LLDCADESDE 1258
            L   ++  DE
Sbjct: 403  LYARSNNLDE 412



 Score =  187 bits (474), Expect = 1e-44
 Identities = 118/414 (28%), Positives = 195/414 (47%), Gaps = 79/414 (19%)
 Frame = +2

Query: 293  AWNLLIRXXXXXXXXXXXXXXFDQMLARGVLPDKFTFPFVVTACSIIANLDKGEEVHASA 472
            +WN +I               F  +   G++P + +FP  + +CS + +L  G   H  A
Sbjct: 1982 SWNSVIADLARGGDSVEALRAFSSLRKLGLIPTRSSFPCTIKSCSALCDLVSGRMSHQQA 2041

Query: 473  IKSGFSRDPFLQNCLIHFYFRCGKPVDARKVFDRMPVRSVVSWTALLSGLVASGEIEDAR 652
               GF  D F+ + LI  Y +CG+  DAR +FD +P+R+VVSWT++++G V + + ++A 
Sbjct: 2042 FVFGFETDLFVSSALIDMYSKCGQLKDARALFDEIPLRNVVSWTSMITGYVQNEQADNAL 2101

Query: 653  AVFE-------------AMPARNVVS---------------------------------- 691
             +F+              +P  +VV                                   
Sbjct: 2102 LLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSGKGITEGVHGFVVKKGFDGSIGV 2161

Query: 692  WTAMIDCYARNGRPDEAFGLFRRMQEED-------------------------------- 775
               ++D YA+ G+P  +  +F  M+E+D                                
Sbjct: 2162 GNTLMDAYAKCGQPLVSKKVFDWMEEKDDISWNSMIAVYAQSGLSGEALEVFHGMVRHVG 2221

Query: 776  VRPNNFTIVALLIACKDLGSLELCRRVHEFAQKNGGLDKSVYIGTALVDTYSNCGSLEDA 955
            VR N  T+ A+L+AC   G+L   + +H+   K   L+ +V +GT+++D Y  CG +E A
Sbjct: 2222 VRYNAVTLSAVLLACAHAGALRAGKCIHDQVIKM-DLEYNVCVGTSIIDMYCKCGRVEMA 2280

Query: 956  QRVFDQMPEKSLATWNSMITSLGVHGQGTRALALFKTMRRSNLQPDGITFVGVLSACLRK 1135
            ++ FD+M EK++ +W +M+   G+HG+   AL +F  M R+ ++P+ ITFV VL+AC   
Sbjct: 2281 KKTFDRMKEKNVKSWTAMVAGYGMHGRAKEALDIFYKMVRAGVKPNYITFVSVLAACSHA 2340

Query: 1136 GLVAEGLRLFGAMVERYGIDPCGEHYACLVRLLDCADESDEVKEMVNDLVVKLD 1297
            GLV EG   F AM  +Y I+P  EHY C+V L   A   +E   ++  + +K D
Sbjct: 2341 GLVEEGWHWFNAMKHKYDIEPGIEHYGCMVDLFGRAGCLNEAYNLIKRMKMKPD 2394



 Score = 92.0 bits (227), Expect = 5e-16
 Identities = 75/263 (28%), Positives = 123/263 (46%), Gaps = 13/263 (4%)
 Frame = +2

Query: 416  TACSIIANLDKGEEVHASAIKSGFSRDPFLQNCLIHFYFRCGKPVDARKVFDRMPVRSVV 595
            T  S    LDK E+   S   +  S  P +  C+++FY          + FD       +
Sbjct: 1907 TPMSTTTKLDKDEK--GSYPYACLSESPSIYVCVVNFY----------ECFDG------I 1948

Query: 596  SWTALLSGLVASGEIEDARAV--FEAMPARNVVSWTAMIDCYARNGRPDEAFGLFRRMQE 769
            ++ ++L G+ +  E     A   ++ +   NV SW ++I   AR G   EA   F  +++
Sbjct: 1949 TYNSILFGVPSGREDHSNLATWFYKYVDKSNVHSWNSVIADLARGGDSVEALRAFSSLRK 2008

Query: 770  EDVRPNNFTIVALLIACKDLGSLELCRRVHEFAQKNGGLDKSVYIGTALVDTYSNCGSLE 949
              + P   +    + +C  L  L   R  H+ A   G  +  +++ +AL+D YS CG L+
Sbjct: 2009 LGLIPTRSSFPCTIKSCSALCDLVSGRMSHQQAFVFG-FETDLFVSSALIDMYSKCGQLK 2067

Query: 950  DAQRVFDQMPEKSLATWNSMITSLGVHGQGTRALALFKTMRR--------SNLQPDGITF 1105
            DA+ +FD++P +++ +W SMIT    + Q   AL LFK            +N+  D +  
Sbjct: 2068 DARALFDEIPLRNVVSWTSMITGYVQNEQADNALLLFKDFLEEETEVEDGNNVPLDSVVM 2127

Query: 1106 VGVLSACLR---KGLVAEGLRLF 1165
            V VLSAC R   KG + EG+  F
Sbjct: 2128 VSVLSACSRVSGKG-ITEGVHGF 2149



 Score = 80.9 bits (198), Expect = 1e-12
 Identities = 70/323 (21%), Positives = 121/323 (37%), Gaps = 2/323 (0%)
 Frame = +2

Query: 158  HARILRSGLSHDPSVLPSLLRIYSSHRSFDLAARLLASFPNPPTIAWNLLIRXXXXXXXX 337
            H  +++ G      V  +L+  Y+      ++ ++         I+WN +I         
Sbjct: 2147 HGFVVKKGFDGSIGVGNTLMDAYAKCGQPLVSKKVFDWMEEKDDISWNSMIAVYAQSGLS 2206

Query: 338  XXXXXXFDQMLAR-GVLPDKFTFPFVVTACSIIANLDKGEEVHASAIKSGFSRDPFLQNC 514
                  F  M+   GV  +  T   V+ AC+    L  G+ +H   IK     +  +   
Sbjct: 2207 GEALEVFHGMVRHVGVRYNAVTLSAVLLACAHAGALRAGKCIHDQVIKMDLEYNVCVGTS 2266

Query: 515  LIHFYFRCGKPVDARKVFDRMPVRSVVSWTALLSGLVASGEIEDARAVFEAMPARNVVSW 694
            +I  Y +CG+                               +E A+  F+ M  +NV SW
Sbjct: 2267 IIDMYCKCGR-------------------------------VEMAKKTFDRMKEKNVKSW 2295

Query: 695  TAMIDCYARNGRPDEAFGLFRRMQEEDVRPNNFTIVALLIACKDLGSLELCRRVHEFAQK 874
            TAM+  Y  +GR  EA  +F +M    V+PN  T V++L AC   G +E         + 
Sbjct: 2296 TAMVAGYGMHGRAKEALDIFYKMVRAGVKPNYITFVSVLAACSHAGLVEEGWHWFNAMKH 2355

Query: 875  NGGLDKSVYIGTALVDTYSNCGSLEDAQRVFDQMPEK-SLATWNSMITSLGVHGQGTRAL 1051
               ++  +     +VD +   G L +A  +  +M  K     W S++ +  +H      L
Sbjct: 2356 KYDIEPGIEHYGCMVDLFGRAGCLNEAYNLIKRMKMKPDFVVWGSLLGACRIHKNVD--L 2413

Query: 1052 ALFKTMRRSNLQPDGITFVGVLS 1120
                  +   L PD   +  +LS
Sbjct: 2414 GEIAAQKLFELDPDNCGYYVLLS 2436


>ref|XP_006291116.1| hypothetical protein CARUB_v10017228mg [Capsella rubella]
            gi|482559823|gb|EOA24014.1| hypothetical protein
            CARUB_v10017228mg [Capsella rubella]
          Length = 454

 Score =  362 bits (929), Expect = 2e-97
 Identities = 192/379 (50%), Positives = 247/379 (65%), Gaps = 1/379 (0%)
 Frame = +2

Query: 149  KQSHARILRSGLSHDPSVLPSLLRIYSSHRSFDLAARLLASFPNPPTIAWNLLIRXXXXX 328
            KQ H RI++  L++D  ++  L+ + SS      A+ +     +P T  WNL+IR     
Sbjct: 37   KQIHTRIIKHNLTNDQLLVRQLISVSSSFGETKYASLVFNQLQSPSTFTWNLMIRSLSVN 96

Query: 329  XXXXXXXXXFDQMLARGVLPDKFTFPFVVTACSIIANLDKGEEVHASAIKSGFSRDPFLQ 508
                     F  ML      DKFTFPFV+ AC   ++L  G +VH  AIK+GF  D F Q
Sbjct: 97   HKPREALLLFILMLNHQSQFDKFTFPFVIKACLASSSLRLGTQVHGLAIKAGFFNDVFFQ 156

Query: 509  NCLIHFYFRCGKPVDARKVFDRMPVRSVVSWTALLSGLVASGEIEDARAVFEAMPARNVV 688
            N L+  YF+CGK    RKVFD+MP RS+VSWT LL GLV++ +++ A+ VF  MP RNVV
Sbjct: 157  NTLMDLYFKCGKLDLGRKVFDKMPGRSIVSWTTLLHGLVSNCQLDSAKIVFNQMPTRNVV 216

Query: 689  SWTAMIDCYARNGRPDEAFGLFRRMQEEDVRPNNFTIVALLIACKDLGSLELCRRVHEFA 868
            SWTAMI  Y +N RPDEAF LFRRMQ +DV+PN FTIV LL A   LGSL + R VH++A
Sbjct: 217  SWTAMITAYVKNRRPDEAFQLFRRMQVDDVKPNEFTIVNLLQASTQLGSLSMGRWVHDYA 276

Query: 869  QKNGGLDKSVYIGTALVDTYSNCGSLEDAQRVFDQMPEKSLATWNSMITSLGVHGQGTRA 1048
             KNG +    ++GTAL+D YS CGSL+DA++VFD M  KSLATWNSMITSLGVHG G  A
Sbjct: 277  HKNGFV-LDCFLGTALIDMYSKCGSLQDARKVFDVMQSKSLATWNSMITSLGVHGCGEEA 335

Query: 1049 LALFKTM-RRSNLQPDGITFVGVLSACLRKGLVAEGLRLFGAMVERYGIDPCGEHYACLV 1225
            L LF  M   ++++PD ITFVGVLSAC   G V +GL+ F  M++ YGI P  EH AC++
Sbjct: 336  LCLFDDMEEEASVEPDAITFVGVLSACANTGNVKDGLKYFTWMIQVYGISPIREHNACMI 395

Query: 1226 RLLDCADESDEVKEMVNDL 1282
            +LL+ A E  EV  +V+ +
Sbjct: 396  QLLEKALEEYEVSSLVDSM 414


>ref|NP_189297.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
            gi|75275188|sp|Q38959.1|PP257_ARATH RecName:
            Full=Pentatricopeptide repeat-containing protein
            At3g26630, chloroplastic; Flags: Precursor
            gi|1402883|emb|CAA66814.1| hypothetical protein
            [Arabidopsis thaliana] gi|1495263|emb|CAA66119.1| orf09
            [Arabidopsis thaliana] gi|11994298|dbj|BAB01728.1|
            unnamed protein product [Arabidopsis thaliana]
            gi|20466384|gb|AAM20509.1| unknown protein [Arabidopsis
            thaliana] gi|23198064|gb|AAN15559.1| unknown protein
            [Arabidopsis thaliana] gi|332643668|gb|AEE77189.1|
            pentatricopeptide repeat-containing protein [Arabidopsis
            thaliana]
          Length = 455

 Score =  361 bits (927), Expect = 3e-97
 Identities = 188/380 (49%), Positives = 249/380 (65%), Gaps = 2/380 (0%)
 Frame = +2

Query: 149  KQSHARILRSGLSHDPSVLPSLLRIYSSHRSFDLAARLLASFPNPPTIAWNLLIRXXXXX 328
            KQ H +I++  L++D  ++  L+ + SS      A+ +     +P T  WNL+IR     
Sbjct: 37   KQIHTKIIKHNLTNDQLLVRQLISVSSSFGETQYASLVFNQLQSPSTFTWNLMIRSLSVN 96

Query: 329  XXXXXXXXXFD-QMLARGVLPDKFTFPFVVTACSIIANLDKGEEVHASAIKSGFSRDPFL 505
                     F   M++     DKFTFPFV+ AC   +++  G +VH  AIK+GF  D F 
Sbjct: 97   HKPREALLLFILMMISHQSQFDKFTFPFVIKACLASSSIRLGTQVHGLAIKAGFFNDVFF 156

Query: 506  QNCLIHFYFRCGKPVDARKVFDRMPVRSVVSWTALLSGLVASGEIEDARAVFEAMPARNV 685
            QN L+  YF+CGKP   RKVFD+MP RS+VSWT +L GLV++ +++ A  VF  MP RNV
Sbjct: 157  QNTLMDLYFKCGKPDSGRKVFDKMPGRSIVSWTTMLYGLVSNSQLDSAEIVFNQMPMRNV 216

Query: 686  VSWTAMIDCYARNGRPDEAFGLFRRMQEEDVRPNNFTIVALLIACKDLGSLELCRRVHEF 865
            VSWTAMI  Y +N RPDEAF LFRRMQ +DV+PN FTIV LL A   LGSL + R VH++
Sbjct: 217  VSWTAMITAYVKNRRPDEAFQLFRRMQVDDVKPNEFTIVNLLQASTQLGSLSMGRWVHDY 276

Query: 866  AQKNGGLDKSVYIGTALVDTYSNCGSLEDAQRVFDQMPEKSLATWNSMITSLGVHGQGTR 1045
            A KNG +    ++GTAL+D YS CGSL+DA++VFD M  KSLATWNSMITSLGVHG G  
Sbjct: 277  AHKNGFV-LDCFLGTALIDMYSKCGSLQDARKVFDVMQGKSLATWNSMITSLGVHGCGEE 335

Query: 1046 ALALFKTM-RRSNLQPDGITFVGVLSACLRKGLVAEGLRLFGAMVERYGIDPCGEHYACL 1222
            AL+LF+ M   ++++PD ITFVGVLSAC   G V +GLR F  M++ YGI P  EH AC+
Sbjct: 336  ALSLFEEMEEEASVEPDAITFVGVLSACANTGNVKDGLRYFTRMIQVYGISPIREHNACM 395

Query: 1223 VRLLDCADESDEVKEMVNDL 1282
            ++LL+ A E ++   +V  +
Sbjct: 396  IQLLEQALEVEKASNLVESM 415


>ref|XP_006395538.1| hypothetical protein EUTSA_v10004197mg [Eutrema salsugineum]
            gi|557092177|gb|ESQ32824.1| hypothetical protein
            EUTSA_v10004197mg [Eutrema salsugineum]
          Length = 453

 Score =  360 bits (924), Expect = 7e-97
 Identities = 188/378 (49%), Positives = 246/378 (65%), Gaps = 2/378 (0%)
 Frame = +2

Query: 149  KQSHARILRSGLSHDPSVLPSLLRIYSSHRSFDLAARLLASFPNPPTIAWNLLIRXXXXX 328
            KQ HA+I+R  L++D  ++  L+ + SS      A+ + +   +P T  WNL+IR     
Sbjct: 37   KQIHAKIIRYNLTNDQLLVRQLISVSSSLGETRYASLVFSQLQSPSTFTWNLMIRSLSVN 96

Query: 329  XXXXXXXXXFDQMLARGVLPDKFTFPFVVTACSIIANLDKGEEVHASAIKSGFSRDPFLQ 508
                     F  ML+     DKFTFPFV+ AC   ++L  G +VH  AIKSGF  D F Q
Sbjct: 97   DKPREALLLFILMLSHQSQLDKFTFPFVIKACLASSSLRLGTQVHGLAIKSGFFSDVFFQ 156

Query: 509  NCLIHFYFRCGKPVDARKVFDRMPVRSVVSWTALLSGLVASGEIEDARAVFEAMPARNVV 688
            N L+  Y +CGKP   RKVFD+MP R++VSWT +L GLV++ +++ A  +F  MP RNVV
Sbjct: 157  NTLMDLYLKCGKPDCGRKVFDKMPGRTIVSWTTMLYGLVSNSQLDSAEIIFNQMPTRNVV 216

Query: 689  SWTAMIDCYARNGRPDEAFGLFRRMQEEDVRPNNFTIVALLIACKDLGSLELCRRVHEFA 868
            SWTAMI  Y +N RPDEAF LFRRMQ ++V+PN FTIV++L A   LGSL + R VH++A
Sbjct: 217  SWTAMITAYVKNCRPDEAFQLFRRMQVDEVKPNEFTIVSMLQASTQLGSLSMGRWVHDYA 276

Query: 869  QKNGGLDKSVYIGTALVDTYSNCGSLEDAQRVFDQMPEKSLATWNSMITSLGVHGQGTRA 1048
             KN G     ++GTAL+D YS CGSL+DA +VFD M  KSLATWNSMITSLGVHG G  A
Sbjct: 277  HKN-GFPLDCFLGTALIDMYSKCGSLQDAWKVFDAMQSKSLATWNSMITSLGVHGCGEEA 335

Query: 1049 LALFKTMRRSNLQPDGITFVGVLSACLRKGLVAEGLRLFGAMVERYGIDPCGEHYACLVR 1228
            L L+  M  + ++PD ITFVGVLSAC   G V +GLR F  M+  Y I+P  EH AC+++
Sbjct: 336  LDLYDQMEEAGVEPDAITFVGVLSACANIGNVKDGLRYFVRMIHVYSINPIQEHNACMIQ 395

Query: 1229 LLDCADES--DEVKEMVN 1276
            LL+ A E   D+V  +V+
Sbjct: 396  LLEQAREREVDKVSNLVD 413


>ref|XP_006844721.1| hypothetical protein AMTR_s00016p00252780 [Amborella trichopoda]
            gi|548847192|gb|ERN06396.1| hypothetical protein
            AMTR_s00016p00252780 [Amborella trichopoda]
          Length = 428

 Score =  358 bits (918), Expect = 4e-96
 Identities = 182/370 (49%), Positives = 238/370 (64%)
 Frame = +2

Query: 152  QSHARILRSGLSHDPSVLPSLLRIYSSHRSFDLAARLLASFPNPPTIAWNLLIRXXXXXX 331
            Q HA + R+GL  D  ++  L+ + S H+  D A  +     NP T  WN +IR      
Sbjct: 49   QIHAHLFRTGLHRDYILITKLINLCSIHQKIDHATLVFNQIENPLTFTWNTMIRAYFKSN 108

Query: 332  XXXXXXXXFDQMLARGVLPDKFTFPFVVTACSIIANLDKGEEVHASAIKSGFSRDPFLQN 511
                    ++ M+  G LPDKFT+PFV+ AC   ++L+KG+E+H  AIK+G   D FLQN
Sbjct: 109  YPEEAILMYNLMVIHGFLPDKFTYPFVIKACVAFSSLEKGKEIHGRAIKAGMVPDIFLQN 168

Query: 512  CLIHFYFRCGKPVDARKVFDRMPVRSVVSWTALLSGLVASGEIEDARAVFEAMPARNVVS 691
             L+  Y +C +   A K+FD+M V+SVVSWT +++GLV+ G++  AR VF+ MP RNVVS
Sbjct: 169  TLMELYMKCNEKTLAHKLFDKMSVKSVVSWTTMVAGLVSHGDMASARRVFDEMPERNVVS 228

Query: 692  WTAMIDCYARNGRPDEAFGLFRRMQEEDVRPNNFTIVALLIACKDLGSLELCRRVHEFAQ 871
            WTAMI  Y RN +P EA  LF  M   +VRPN FTIV+LL+ C  L SL L R VHEF  
Sbjct: 229  WTAMIHGYVRNNQPHEALELFILMLRANVRPNEFTIVSLLLVCTSLNSLRLGRWVHEFMA 288

Query: 872  KNGGLDKSVYIGTALVDTYSNCGSLEDAQRVFDQMPEKSLATWNSMITSLGVHGQGTRAL 1051
            K+ G + SVY+GTAL+D YSNCGS+ DA+ VFD M E+S+ATWNSMITSLGVHG+G  AL
Sbjct: 289  KS-GFELSVYLGTALIDMYSNCGSINDAKNVFDGMSERSVATWNSMITSLGVHGKGKEAL 347

Query: 1052 ALFKTMRRSNLQPDGITFVGVLSACLRKGLVAEGLRLFGAMVERYGIDPCGEHYACLVRL 1231
             +F  M +  ++PD ITFVGVL AC+  GLV EG   F +M   YGI P  EH  C+V L
Sbjct: 348  NVFGAMEKGKVRPDDITFVGVLCACVNMGLVEEGGVYFDSMYSVYGIVPTLEHCRCMVEL 407

Query: 1232 LDCADESDEV 1261
            ++    +D V
Sbjct: 408  VELGRNNDGV 417



 Score = 85.1 bits (209), Expect = 6e-14
 Identities = 69/294 (23%), Positives = 113/294 (38%), Gaps = 31/294 (10%)
 Frame = +2

Query: 149 KQSHARILRSGLSHDPSVLPSLLRIYS-------SHRSFD-------------------- 247
           K+ H R +++G+  D  +  +L+ +Y        +H+ FD                    
Sbjct: 149 KEIHGRAIKAGMVPDIFLQNTLMELYMKCNEKTLAHKLFDKMSVKSVVSWTTMVAGLVSH 208

Query: 248 ----LAARLLASFPNPPTIAWNLLIRXXXXXXXXXXXXXXFDQMLARGVLPDKFTFPFVV 415
                A R+    P    ++W  +I               F  ML   V P++FT   ++
Sbjct: 209 GDMASARRVFDEMPERNVVSWTAMIHGYVRNNQPHEALELFILMLRANVRPNEFTIVSLL 268

Query: 416 TACSIIANLDKGEEVHASAIKSGFSRDPFLQNCLIHFYFRCGKPVDARKVFDRMPVRSVV 595
             C+ + +L  G  VH    KSGF    +L   LI  Y  CG   DA+ VFD M  RSV 
Sbjct: 269 LVCTSLNSLRLGRWVHEFMAKSGFELSVYLGTALIDMYSNCGSINDAKNVFDGMSERSVA 328

Query: 596 SWTALLSGLVASGEIEDARAVFEAMPARNVVSWTAMIDCYARNGRPDEAFGLFRRMQEED 775
           +W ++++ L                                 +G+  EA  +F  M++  
Sbjct: 329 TWNSMITSL-------------------------------GVHGKGKEALNVFGAMEKGK 357

Query: 776 VRPNNFTIVALLIACKDLGSLELCRRVHEFAQKNGGLDKSVYIGTALVDTYSNC 937
           VRP++ T V +L AC ++G +E          + G    S+Y    +V T  +C
Sbjct: 358 VRPDDITFVGVLCACVNMGLVE----------EGGVYFDSMYSVYGIVPTLEHC 401


>gb|EMJ18298.1| hypothetical protein PRUPE_ppa022877mg, partial [Prunus persica]
          Length = 347

 Score =  355 bits (912), Expect = 2e-95
 Identities = 184/346 (53%), Positives = 233/346 (67%)
 Frame = +2

Query: 245  DLAARLLASFPNPPTIAWNLLIRXXXXXXXXXXXXXXFDQMLARGVLPDKFTFPFVVTAC 424
            D A  +      P T  WNL+I               +  M+ +G  PDKFTFPFV+ AC
Sbjct: 2    DYANLIFHQIQGPLTFTWNLMIMSYTINGCSQEALLLYSLMIHQGFPPDKFTFPFVIKAC 61

Query: 425  SIIANLDKGEEVHASAIKSGFSRDPFLQNCLIHFYFRCGKPVDARKVFDRMPVRSVVSWT 604
               +  ++G+ VH  +IK+ FSRD F+QN L+ FYF+CG+     +VF++M VR+VVSWT
Sbjct: 62   IASSAFEQGKVVHGLSIKNSFSRDMFVQNTLMDFYFKCGEIDCGCRVFEKMRVRNVVSWT 121

Query: 605  ALLSGLVASGEIEDARAVFEAMPARNVVSWTAMIDCYARNGRPDEAFGLFRRMQEEDVRP 784
             ++SGLVA GE+  ARAVFE MPA+NVVSWTAM++ Y RN +P+EAF LF RMQ  DVRP
Sbjct: 122  TMISGLVACGELHAARAVFERMPAKNVVSWTAMMNGYVRNQQPEEAFELFWRMQVGDVRP 181

Query: 785  NNFTIVALLIACKDLGSLELCRRVHEFAQKNGGLDKSVYIGTALVDTYSNCGSLEDAQRV 964
            N FT+V+LL AC  LGSL+L R +H+FA KN G    V++GTAL+DTYS CGSLEDA+RV
Sbjct: 182  NEFTLVSLLKACTLLGSLKLGRWIHDFALKN-GFKLDVFLGTALIDTYSKCGSLEDARRV 240

Query: 965  FDQMPEKSLATWNSMITSLGVHGQGTRALALFKTMRRSNLQPDGITFVGVLSACLRKGLV 1144
            FD+M  KSLATWN+MITSLGVHG G  ALALF  M + N++PD ITFVGVLSACL    +
Sbjct: 241  FDEMRIKSLATWNAMITSLGVHGFGEEALALFAEMEKVNVRPDAITFVGVLSACLHTNNL 300

Query: 1145 AEGLRLFGAMVERYGIDPCGEHYACLVRLLDCADESDEVKEMVNDL 1282
              G   F  M + YGI P  EHY C++ L   AD  DEV ++   +
Sbjct: 301  EAGCMYFKYMSKHYGITPILEHYTCMIELYSRADMLDEVCKLAQSM 346



 Score = 97.1 bits (240), Expect = 1e-17
 Identities = 61/243 (25%), Positives = 105/243 (43%)
 Frame = +2

Query: 251 AARLLASFPNPPTIAWNLLIRXXXXXXXXXXXXXXFDQMLARGVLPDKFTFPFVVTACSI 430
           A  +    P    ++W  ++               F +M    V P++FT   ++ AC++
Sbjct: 136 ARAVFERMPAKNVVSWTAMMNGYVRNQQPEEAFELFWRMQVGDVRPNEFTLVSLLKACTL 195

Query: 431 IANLDKGEEVHASAIKSGFSRDPFLQNCLIHFYFRCGKPVDARKVFDRMPVRSVVSWTAL 610
           + +L  G  +H  A+K+GF  D FL   LI  Y +CG                       
Sbjct: 196 LGSLKLGRWIHDFALKNGFKLDVFLGTALIDTYSKCGS---------------------- 233

Query: 611 LSGLVASGEIEDARAVFEAMPARNVVSWTAMIDCYARNGRPDEAFGLFRRMQEEDVRPNN 790
                    +EDAR VF+ M  +++ +W AMI     +G  +EA  LF  M++ +VRP+ 
Sbjct: 234 ---------LEDARRVFDEMRIKSLATWNAMITSLGVHGFGEEALALFAEMEKVNVRPDA 284

Query: 791 FTIVALLIACKDLGSLELCRRVHEFAQKNGGLDKSVYIGTALVDTYSNCGSLEDAQRVFD 970
            T V +L AC    +LE      ++  K+ G+   +   T +++ YS    L++  ++  
Sbjct: 285 ITFVGVLSACLHTNNLEAGCMYFKYMSKHYGITPILEHYTCMIELYSRADMLDEVCKLAQ 344

Query: 971 QMP 979
            MP
Sbjct: 345 SMP 347


>ref|XP_003548483.1| PREDICTED: pentatricopeptide repeat-containing protein At3g26630,
            chloroplastic-like isoform X1 [Glycine max]
            gi|571525647|ref|XP_006598987.1| PREDICTED:
            pentatricopeptide repeat-containing protein At3g26630,
            chloroplastic-like isoform X2 [Glycine max]
          Length = 483

 Score =  347 bits (889), Expect = 8e-93
 Identities = 177/371 (47%), Positives = 241/371 (64%), Gaps = 1/371 (0%)
 Frame = +2

Query: 149  KQSHARILRSGLSHDPSVLPSLLRIYSSHRSFDLAARLLASFPNPPTIAWNLLIRXXXXX 328
            KQ H +I+R GL++D  ++  L+++ SS+     A  +      P    WN++IR     
Sbjct: 42   KQVHGKIIRFGLTYDQLLMRKLIQLSSSYGKMKYATLVFDQLNAPDVFTWNVMIRAFTIG 101

Query: 329  XXXXXXXXXFDQMLARGVLPDKFTFPFVVTACSIIANLDKGEEVHASAIKSGFSRDPFLQ 508
                     F  ML +G  PDKFT+PFV+ AC   + LD G   HA AIK GF  D ++Q
Sbjct: 102  GSPKMALLLFKAMLCQGFAPDKFTYPFVINACMASSALDLGIVAHALAIKMGFWGDLYVQ 161

Query: 509  NCLIHFYFRCGKPVDARKVFDRMPVRSVVSWTALLSGLVASGEIEDARAVFEAMPARNVV 688
            N +++ YF+C    D RKVFD+M VR+V +WT ++SGLVA G+++ AR +FE MP++NVV
Sbjct: 162  NTMMNLYFKCENVDDGRKVFDKMRVRNVFAWTTVISGLVACGKLDTARELFEQMPSKNVV 221

Query: 689  SWTAMIDCYARNGRPDEAFGLFRRMQEED-VRPNNFTIVALLIACKDLGSLELCRRVHEF 865
            SWTAMID Y ++ +P EAF LF RMQ+ D VRPN +T+V+L+ AC ++GSL+L RRVH+F
Sbjct: 222  SWTAMIDGYVKHKQPIEAFNLFERMQQVDNVRPNEYTLVSLVRACTEMGSLKLGRRVHDF 281

Query: 866  AQKNGGLDKSVYIGTALVDTYSNCGSLEDAQRVFDQMPEKSLATWNSMITSLGVHGQGTR 1045
            A KN G +   ++GTAL+D YS CG L+DA+ VFD M  ++LATWN+MITSLGVHG    
Sbjct: 282  ALKN-GFELEPFLGTALIDMYSKCGYLDDARTVFDMMQVRTLATWNTMITSLGVHGYRDE 340

Query: 1046 ALALFKTMRRSNLQPDGITFVGVLSACLRKGLVAEGLRLFGAMVERYGIDPCGEHYACLV 1225
            AL+LF  M ++N  PD ITFVGVLSAC+    +    + F  M + YGI P  EHY C+V
Sbjct: 341  ALSLFDEMEKANEVPDAITFVGVLSACVYMNDLELAQKYFNLMTDHYGITPILEHYTCMV 400

Query: 1226 RLLDCADESDE 1258
             +   A E DE
Sbjct: 401  EIYTRAIELDE 411


>ref|XP_003624556.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
            gi|355499571|gb|AES80774.1| Pentatricopeptide
            repeat-containing protein [Medicago truncatula]
          Length = 476

 Score =  343 bits (881), Expect = 7e-92
 Identities = 177/384 (46%), Positives = 248/384 (64%), Gaps = 1/384 (0%)
 Frame = +2

Query: 149  KQSHARILRSGLSHDPSVLPSLLRIYSSHRSFDLAARLLASFPNPPTIAWNLLIRXXXXX 328
            KQ HARI+R  L+HD  ++  L +I SS+   D A+ +     +P    WN++IR     
Sbjct: 37   KQIHARIIRFRLTHDQLLIRKLCQISSSYGKIDYASLVFDQLNDPDIFTWNVMIRAYNTS 96

Query: 329  XXXXXXXXXFDQMLARGVLPDKFTFPFVVTACSIIANLDKGEEVHASAIKSGFSRDPFLQ 508
                     F  M+  G LPDKFT+PFV+ AC     +D G   H  AIK GF  D ++Q
Sbjct: 97   GLPQKSIFLFKDMICCGFLPDKFTYPFVINACIASGVIDFGRLTHGLAIKMGFWSDVYVQ 156

Query: 509  NCLIHFYFRCGKPVD-ARKVFDRMPVRSVVSWTALLSGLVASGEIEDARAVFEAMPARNV 685
            N +++ YF+ G  VD   KVFD+M VR+VVSWT +++GLVA G+++ AR VFE +P++NV
Sbjct: 157  NNMMNLYFKIGGDVDDGWKVFDKMRVRNVVSWTTVIAGLVACGKLDTAREVFERIPSKNV 216

Query: 686  VSWTAMIDCYARNGRPDEAFGLFRRMQEEDVRPNNFTIVALLIACKDLGSLELCRRVHEF 865
            VSWTAMI+ Y +N  P +AF LF RM  ++VRPN FT+V+L+ AC DLGSL+L RR+H+F
Sbjct: 217  VSWTAMINGYVKNDNPIKAFDLFERMLIDNVRPNEFTLVSLIKACTDLGSLKLGRRMHDF 276

Query: 866  AQKNGGLDKSVYIGTALVDTYSNCGSLEDAQRVFDQMPEKSLATWNSMITSLGVHGQGTR 1045
            A KN G +   ++GTALVD YS CGSL+ A +VF  M  ++LATWN+M+TS GVHG G  
Sbjct: 277  ALKN-GFELGPFLGTALVDMYSKCGSLDAAVKVFGLMEVRNLATWNTMLTSFGVHGFGNE 335

Query: 1046 ALALFKTMRRSNLQPDGITFVGVLSACLRKGLVAEGLRLFGAMVERYGIDPCGEHYACLV 1225
             L LFK M ++ + PD ITFVGVLSAC++   +  G + F  M E Y + P  EHY C+V
Sbjct: 336  VLDLFKEMEKAGVVPDAITFVGVLSACVQINDLELGQKYFSLMTEHYSLTPILEHYTCMV 395

Query: 1226 RLLDCADESDEVKEMVNDLVVKLD 1297
             L   A+E +E++ + + + + ++
Sbjct: 396  GLYTRANELNEIRTLGDTMSLSIE 419


>gb|ESW33780.1| hypothetical protein PHAVU_001G097900g [Phaseolus vulgaris]
          Length = 482

 Score =  341 bits (875), Expect = 3e-91
 Identities = 172/370 (46%), Positives = 241/370 (65%)
 Frame = +2

Query: 149  KQSHARILRSGLSHDPSVLPSLLRIYSSHRSFDLAARLLASFPNPPTIAWNLLIRXXXXX 328
            KQ H RI+R GL +D  ++ +L+++ SS+   + A  +      P T  WN++IR     
Sbjct: 41   KQVHGRIIRFGLIYDQLLMRNLIQLSSSYGKLNYATLVFDQLNAPDTFTWNVMIRANTIG 100

Query: 329  XXXXXXXXXFDQMLARGVLPDKFTFPFVVTACSIIANLDKGEEVHASAIKSGFSRDPFLQ 508
                     F  ML++G  PDKFT+PFV++AC     LD G   HA AIK GF  D ++Q
Sbjct: 101  GSPKMALLLFKAMLSQGFAPDKFTYPFVISACVASNALDLGRLTHALAIKMGFWSDLYVQ 160

Query: 509  NCLIHFYFRCGKPVDARKVFDRMPVRSVVSWTALLSGLVASGEIEDARAVFEAMPARNVV 688
              +++ YF+C +  D  KVFD+M VR+V +WT++++G VA G ++ AR +FE MP++NVV
Sbjct: 161  TNVMNLYFKCHEVDDGWKVFDKMRVRNVFAWTSVIAGFVACGSLDTARKLFEKMPSKNVV 220

Query: 689  SWTAMIDCYARNGRPDEAFGLFRRMQEEDVRPNNFTIVALLIACKDLGSLELCRRVHEFA 868
            SWTAMID Y ++ RP EAF LF RM  +DVRPN +T+V+L+ AC ++GSL+L RR+H+F 
Sbjct: 221  SWTAMIDGYVKHERPIEAFNLFERMLVDDVRPNEYTVVSLVRACTEMGSLKLGRRIHDFV 280

Query: 869  QKNGGLDKSVYIGTALVDTYSNCGSLEDAQRVFDQMPEKSLATWNSMITSLGVHGQGTRA 1048
             KN   D   ++GTAL+D YS CGSL++A++VFD M  ++LATWN+MITSLGVHG    A
Sbjct: 281  LKN-NFDLGPFLGTALIDMYSKCGSLDEARKVFDLMQVRTLATWNTMITSLGVHGFRDEA 339

Query: 1049 LALFKTMRRSNLQPDGITFVGVLSACLRKGLVAEGLRLFGAMVERYGIDPCGEHYACLVR 1228
            ++LF+ M ++N  PD ITFVGVLSAC+         + F  M + YGI P  EHY C+V 
Sbjct: 340  ISLFEEMVKANEVPDAITFVGVLSACIYVNDTQLAQKYFNLMTDHYGITPILEHYTCMVE 399

Query: 1229 LLDCADESDE 1258
            +   A E DE
Sbjct: 400  IYTRAVELDE 409


>ref|XP_003553320.1| PREDICTED: pentatricopeptide repeat-containing protein At3g26630,
            chloroplastic-like [Glycine max]
          Length = 474

 Score =  334 bits (856), Expect = 5e-89
 Identities = 167/371 (45%), Positives = 238/371 (64%)
 Frame = +2

Query: 149  KQSHARILRSGLSHDPSVLPSLLRIYSSHRSFDLAARLLASFPNPPTIAWNLLIRXXXXX 328
            KQ H +I+R GL++D  ++  L+++  S+     A  +      P    WN++IR     
Sbjct: 41   KQVHGKIIRYGLTYDQLLVRKLIQLSPSYGKMKYATLVFDQLNAPDVFTWNVMIRAYTIG 100

Query: 329  XXXXXXXXXFDQMLARGVLPDKFTFPFVVTACSIIANLDKGEEVHASAIKSGFSRDPFLQ 508
                     F  ML +G  PDKFT+P V+ AC     LD G   HA AIK GF  D ++Q
Sbjct: 101  GSPKMAFLLFKAMLYQGFAPDKFTYPCVINACMAYNALDVGRVAHALAIKMGFWGDLYVQ 160

Query: 509  NCLIHFYFRCGKPVDARKVFDRMPVRSVVSWTALLSGLVASGEIEDARAVFEAMPARNVV 688
            N +++ YF+C    D   VFD+M VR+V +WT +++G VA G+++ AR +FE MP++NVV
Sbjct: 161  NTMMNLYFKCENVDDGWNVFDKMCVRNVFAWTTVIAGFVACGKLDTARELFEQMPSKNVV 220

Query: 689  SWTAMIDCYARNGRPDEAFGLFRRMQEEDVRPNNFTIVALLIACKDLGSLELCRRVHEFA 868
            SWTA+ID Y ++ +P EAF LF RMQ ++VRPN +T+V+L+ AC ++GSL+L RRVH+FA
Sbjct: 221  SWTAIIDGYVKHKQPIEAFDLFERMQADNVRPNEYTLVSLVRACTEMGSLKLGRRVHDFA 280

Query: 869  QKNGGLDKSVYIGTALVDTYSNCGSLEDAQRVFDQMPEKSLATWNSMITSLGVHGQGTRA 1048
             KN G +   ++GTAL+D YS CG+L+DA+ VFD M  ++LATWN+MITSLGVHG    A
Sbjct: 281  LKN-GFELEPFLGTALIDMYSKCGNLDDARTVFDMMQMRTLATWNTMITSLGVHGYRDEA 339

Query: 1049 LALFKTMRRSNLQPDGITFVGVLSACLRKGLVAEGLRLFGAMVERYGIDPCGEHYACLVR 1228
            L++F+ M ++N  PD ITFVGVLSAC+    +    + F  M + YGI P  EHY C+V 
Sbjct: 340  LSIFEEMEKANEVPDAITFVGVLSACVYMNDLELAQKYFNLMTDHYGITPILEHYTCMVE 399

Query: 1229 LLDCADESDEV 1261
            +   A + DE+
Sbjct: 400  IHTRAIKLDEI 410


>gb|EPS63217.1| hypothetical protein M569_11569 [Genlisea aurea]
          Length = 417

 Score =  318 bits (816), Expect = 2e-84
 Identities = 170/366 (46%), Positives = 234/366 (63%), Gaps = 6/366 (1%)
 Frame = +2

Query: 149  KQSHARILRSGLSHDPS--VLPSLLRIYSSHRSFDLAARLLASFPNPPTIAWNLLIRXXX 322
            KQ H RI+RSGL    +  ++  L+R+ SS    D A  +L    +P + +WNLLIR   
Sbjct: 47   KQIHGRIIRSGLQQHQNQLIVARLIRLCSSFGKLDYAYLVLERIEDPTSFSWNLLIRAHT 106

Query: 323  XXXXXXXXXXXFDQMLARGVLPDKFTFPFVVTACSIIANLDKGEEVHASAIKSGFSRDPF 502
                       ++ M+ RGV  DKFTFPF + AC     ++K  E++  A+K G  RD +
Sbjct: 107  ENGRPVKAVLLYNLMIRRGVDADKFTFPFAMKACLASGFVEKARELYGFAVKRGMWRDVY 166

Query: 503  LQNCLIHFYFRCGKPVDARKVFDRMPV--RSVVSWTALLSGLVASGEIEDARAVFEAMPA 676
            L N L+  YF+ G   DA KVFD+MP   ++ VSWT  ++GL+  G ++ AR +F+ MP 
Sbjct: 167  LNNLLMAVYFKYGALDDALKVFDKMPRHNKTAVSWTTAIAGLLRRGRVDHARKLFDEMPR 226

Query: 677  RNVVSWTAMIDCYARNGRPDEAFGLFRRMQEEDVRPNNFTIVALLIACKDLGSLELCRRV 856
            RNVVS+TAMI+ YAR+ +P+ AF LF RMQ EDV PN +T+V L ++C  LG LEL  RV
Sbjct: 227  RNVVSFTAMINGYARSEKPERAFELFARMQREDVTPNEYTLVGLAMSCSRLGILELGHRV 286

Query: 857  HEFAQKNGGLDKSVYIGTALVDTYSNCGSLEDAQRVFDQMPEK-SLATWNSMITSLGVHG 1033
            HE+A  N G +   ++GTAL+D YS CGS + A+RVF+ M E+ S ATWN+MITSLG+HG
Sbjct: 287  HEYATGN-GFEIGPFLGTALIDMYSKCGSPDHAKRVFEGMEERSSAATWNAMITSLGIHG 345

Query: 1034 QGTRALALFKTMRR-SNLQPDGITFVGVLSACLRKGLVAEGLRLFGAMVERYGIDPCGEH 1210
             G  AL+LF+ M R +N++PD  T  GVL+ACL+   V +G++ F  M+ RYGI+P  EH
Sbjct: 346  NGEEALSLFEEMERTTNIEPDAFTLTGVLAACLQTNNVEKGIKYFYHMINRYGIEPVPEH 405

Query: 1211 YACLVR 1228
            Y  L R
Sbjct: 406  YTYLSR 411


>ref|XP_002279137.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
            chloroplastic-like [Vitis vinifera]
          Length = 628

 Score =  291 bits (745), Expect = 4e-76
 Identities = 155/382 (40%), Positives = 221/382 (57%)
 Frame = +2

Query: 152  QSHARILRSGLSHDPSVLPSLLRIYSSHRSFDLAARLLASFPNPPTIAWNLLIRXXXXXX 331
            Q HA + R GL H P +   L R Y+S    D +  L     NP    W  +I       
Sbjct: 48   QIHAVLFRHGLDHHPILNFKLQRSYASLGRLDYSVALFGRTQNPSVFFWTAIIHGHALRG 107

Query: 332  XXXXXXXXFDQMLARGVLPDKFTFPFVVTACSIIANLDKGEEVHASAIKSGFSRDPFLQN 511
                    + QML +GV P+ FTF  ++  C I    + G+ +H+ A+K GF  D +++ 
Sbjct: 108  LHEQALNFYAQMLTQGVEPNAFTFSSILKLCPI----EPGKALHSQAVKLGFDSDLYVRT 163

Query: 512  CLIHFYFRCGKPVDARKVFDRMPVRSVVSWTALLSGLVASGEIEDARAVFEAMPARNVVS 691
             L+  Y R G  V A+++FD MP +S+VS TA+L+     GE++ AR +F+ M  R+ V 
Sbjct: 164  GLLDVYARGGDVVSAQQLFDTMPEKSLVSLTAMLTCYAKHGELDAARVLFDGMEERDGVC 223

Query: 692  WTAMIDCYARNGRPDEAFGLFRRMQEEDVRPNNFTIVALLIACKDLGSLELCRRVHEFAQ 871
            W  MID Y +NG P+EA  LFRRM +   +PN  T++++L AC  LG+LE  R VH + +
Sbjct: 224  WNVMIDGYTQNGMPNEALVLFRRMLKAKAKPNEVTVLSVLSACGQLGALESGRWVHSYIE 283

Query: 872  KNGGLDKSVYIGTALVDTYSNCGSLEDAQRVFDQMPEKSLATWNSMITSLGVHGQGTRAL 1051
             NG +  +V++GTALVD YS CGSLEDA+ VFD++ +K +  WNSMI    +HG    AL
Sbjct: 284  NNG-IQFNVHVGTALVDMYSKCGSLEDARLVFDKIDDKDVVAWNSMIVGYAMHGFSQEAL 342

Query: 1052 ALFKTMRRSNLQPDGITFVGVLSACLRKGLVAEGLRLFGAMVERYGIDPCGEHYACLVRL 1231
             LFK+M R  L P  ITF+G+LSAC   G V EG  +F  M + YGI+P  EHY C+V L
Sbjct: 343  QLFKSMCRMGLHPTNITFIGILSACGHSGWVTEGWDIFNKMKDEYGIEPKIEHYGCMVNL 402

Query: 1232 LDCADESDEVKEMVNDLVVKLD 1297
            L  A   ++  E+V ++ ++ D
Sbjct: 403  LGRAGHVEQAYELVKNMNIEPD 424


>ref|XP_002263755.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66520-like
            [Vitis vinifera]
          Length = 624

 Score =  290 bits (743), Expect = 7e-76
 Identities = 153/385 (39%), Positives = 225/385 (58%), Gaps = 2/385 (0%)
 Frame = +2

Query: 149  KQSHARILRSGLSHDPSVLPSLLRIYSSHRSFDL--AARLLASFPNPPTIAWNLLIRXXX 322
            KQ H++I+R GLS D   +  +++  +  +S DL  A  +    P+P    +N + R   
Sbjct: 37   KQYHSQIIRLGLSADNDAMGRVIKFCAISKSGDLNYALEVFDKIPHPDAYIYNTIFRGYL 96

Query: 323  XXXXXXXXXXXFDQMLARGVLPDKFTFPFVVTACSIIANLDKGEEVHASAIKSGFSRDPF 502
                       + +ML + V P+KFT+P ++ AC I   +++G+++HA  +K GF  D F
Sbjct: 97   RWQLARNCIFMYSRMLHKSVSPNKFTYPPLIRACCIDYAIEEGKQIHAHVLKFGFGADGF 156

Query: 503  LQNCLIHFYFRCGKPVDARKVFDRMPVRSVVSWTALLSGLVASGEIEDARAVFEAMPARN 682
              N LIH Y        AR+VFD MP R VVSWT+L++G    G ++ AR VFE MP RN
Sbjct: 157  SLNNLIHMYVNFQSLEQARRVFDNMPQRDVVSWTSLITGYSQWGFVDKAREVFELMPERN 216

Query: 683  VVSWTAMIDCYARNGRPDEAFGLFRRMQEEDVRPNNFTIVALLIACKDLGSLELCRRVHE 862
             VSW AMI  Y ++ R  EAF LF RM+ E+V  + F   ++L AC  LG+LE  + +H 
Sbjct: 217  SVSWNAMIAAYVQSNRLHEAFALFDRMRLENVVLDKFVAASMLSACTGLGALEQGKWIHG 276

Query: 863  FAQKNGGLDKSVYIGTALVDTYSNCGSLEDAQRVFDQMPEKSLATWNSMITSLGVHGQGT 1042
            + +K+ G++    + T ++D Y  CG LE A  VF+++P+K +++WN MI  L +HG+G 
Sbjct: 277  YIEKS-GIELDSKLATTVIDMYCKCGCLEKASEVFNELPQKGISSWNCMIGGLAMHGKGE 335

Query: 1043 RALALFKTMRRSNLQPDGITFVGVLSACLRKGLVAEGLRLFGAMVERYGIDPCGEHYACL 1222
             A+ LFK M R  + PDGITFV VLSAC   GLV EG   F  M E  G+ P  EH+ C+
Sbjct: 336  AAIELFKEMEREMVAPDGITFVNVLSACAHSGLVEEGKHYFQYMTEVLGLKPGMEHFGCM 395

Query: 1223 VRLLDCADESDEVKEMVNDLVVKLD 1297
            V LL  A   +E ++++N++ V  D
Sbjct: 396  VDLLGRAGLLEEARKLINEMPVNPD 420


>ref|XP_004289184.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
            chloroplastic-like [Fragaria vesca subsp. vesca]
          Length = 619

 Score =  287 bits (734), Expect = 8e-75
 Identities = 154/382 (40%), Positives = 222/382 (58%)
 Frame = +2

Query: 152  QSHARILRSGLSHDPSVLPSLLRIYSSHRSFDLAARLLASFPNPPTIAWNLLIRXXXXXX 331
            Q+HA +LR  L H P++   L R Y+S    D +  L     NP    W+ +I       
Sbjct: 39   QTHALLLRHNLHHHPTLNFKLQRSYASFNRLDYSVALFRQTQNPSVFFWSSIINSHSKRG 98

Query: 332  XXXXXXXXFDQMLARGVLPDKFTFPFVVTACSIIANLDKGEEVHASAIKSGFSRDPFLQN 511
                    + QML  GV P+ FTF  +  +C I+     G+ +H  AIK GF  D +++ 
Sbjct: 99   LHHLALTFYTQMLTNGVEPNCFTFSALFKSCPIVT----GKVLHCHAIKFGFDSDLYVRT 154

Query: 512  CLIHFYFRCGKPVDARKVFDRMPVRSVVSWTALLSGLVASGEIEDARAVFEAMPARNVVS 691
             L+  Y R G  V AR++FD MP +S+VS TA+++     GE+++AR +F+ M  R+VV 
Sbjct: 155  GLVDVYARGGDVVGARELFDTMPEKSLVSLTAMITCYAKRGEVDEARVLFDGMEERDVVC 214

Query: 692  WTAMIDCYARNGRPDEAFGLFRRMQEEDVRPNNFTIVALLIACKDLGSLELCRRVHEFAQ 871
            W  MID YA++G P+EA  LFRRM  E V+P+  T+++LL AC  +G+LE  R VH + +
Sbjct: 215  WNVMIDAYAQHGMPNEALLLFRRMLVEKVKPDGVTVLSLLSACGQIGALESGRWVHSYVE 274

Query: 872  KNGGLDKSVYIGTALVDTYSNCGSLEDAQRVFDQMPEKSLATWNSMITSLGVHGQGTRAL 1051
             N G+   V +G+AL+D Y  CGS EDA+ VFD++  K +  WNSMI    +HG    AL
Sbjct: 275  SN-GIRIDVQVGSALIDMYCKCGSWEDARLVFDRIGGKDVVVWNSMIVGYAMHGFSREAL 333

Query: 1052 ALFKTMRRSNLQPDGITFVGVLSACLRKGLVAEGLRLFGAMVERYGIDPCGEHYACLVRL 1231
             LF  M R   +P  ITF+GVL+AC   GLV+EG   F +M ++YGI+P  EHY C+V L
Sbjct: 334  DLFSEMCRIGYRPTDITFIGVLNACAYAGLVSEGEAFFCSMKDQYGIEPKIEHYGCMVNL 393

Query: 1232 LDCADESDEVKEMVNDLVVKLD 1297
            L  A + +E  E V ++ ++ D
Sbjct: 394  LSRAGKVEEAYEFVKNMKIEPD 415