BLASTX nr result

ID: Zingiber24_contig00031744 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00031744
         (379 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006592185.1| PREDICTED: pumilio homolog 2-like isoform X2...    58   2e-06
ref|XP_003539618.1| PREDICTED: pumilio homolog 2-like isoform X1...    58   2e-06
ref|XP_006592187.1| PREDICTED: pumilio homolog 2-like isoform X3...    56   4e-06
ref|XP_003539627.1| PREDICTED: pumilio homolog 2-like isoform X1...    56   4e-06
ref|XP_003606712.1| Pumilio-like protein [Medicago truncatula] g...    56   6e-06
ref|XP_002278108.2| PREDICTED: pumilio homolog 1-like [Vitis vin...    55   1e-05
ref|XP_006590974.1| PREDICTED: pumilio homolog 2-like isoform X1...    55   1e-05
emb|CBI31647.3| unnamed protein product [Vitis vinifera]               55   1e-05

>ref|XP_006592185.1| PREDICTED: pumilio homolog 2-like isoform X2 [Glycine max]
          Length = 902

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 31/67 (46%), Positives = 38/67 (56%)
 Frame = +1

Query: 178 MLSNMGVHSLIGNXXXXXXXXXXXXXXXXXXXXXXXXASDRERELSIFRSGSAPPTVDGS 357
           MLS +G   ++G+                        A DREREL+IFRSGSAPPTVDGS
Sbjct: 1   MLSELGRRPMLGSNEGSFGDELEKEIGMLLREQRRQEADDRERELNIFRSGSAPPTVDGS 60

Query: 358 LAAVGGI 378
           L+AVGG+
Sbjct: 61  LSAVGGL 67


>ref|XP_003539618.1| PREDICTED: pumilio homolog 2-like isoform X1 [Glycine max]
          Length = 1033

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 31/67 (46%), Positives = 38/67 (56%)
 Frame = +1

Query: 178 MLSNMGVHSLIGNXXXXXXXXXXXXXXXXXXXXXXXXASDRERELSIFRSGSAPPTVDGS 357
           MLS +G   ++G+                        A DREREL+IFRSGSAPPTVDGS
Sbjct: 1   MLSELGRRPMLGSNEGSFGDELEKEIGMLLREQRRQEADDRERELNIFRSGSAPPTVDGS 60

Query: 358 LAAVGGI 378
           L+AVGG+
Sbjct: 61  LSAVGGL 67


>ref|XP_006592187.1| PREDICTED: pumilio homolog 2-like isoform X3 [Glycine max]
          Length = 926

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 30/67 (44%), Positives = 38/67 (56%)
 Frame = +1

Query: 178 MLSNMGVHSLIGNXXXXXXXXXXXXXXXXXXXXXXXXASDRERELSIFRSGSAPPTVDGS 357
           MLS +G   ++G+                        A DREREL+IFRSGSAPPTV+GS
Sbjct: 1   MLSELGRRPMLGSNEGSFGDELEKEIGMLLREQRRQEADDRERELNIFRSGSAPPTVEGS 60

Query: 358 LAAVGGI 378
           L+AVGG+
Sbjct: 61  LSAVGGL 67


>ref|XP_003539627.1| PREDICTED: pumilio homolog 2-like isoform X1 [Glycine max]
           gi|571492295|ref|XP_006592186.1| PREDICTED: pumilio
           homolog 2-like isoform X2 [Glycine max]
          Length = 1053

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 30/67 (44%), Positives = 38/67 (56%)
 Frame = +1

Query: 178 MLSNMGVHSLIGNXXXXXXXXXXXXXXXXXXXXXXXXASDRERELSIFRSGSAPPTVDGS 357
           MLS +G   ++G+                        A DREREL+IFRSGSAPPTV+GS
Sbjct: 1   MLSELGRRPMLGSNEGSFGDELEKEIGMLLREQRRQEADDRERELNIFRSGSAPPTVEGS 60

Query: 358 LAAVGGI 378
           L+AVGG+
Sbjct: 61  LSAVGGL 67


>ref|XP_003606712.1| Pumilio-like protein [Medicago truncatula]
           gi|355507767|gb|AES88909.1| Pumilio-like protein
           [Medicago truncatula]
          Length = 1025

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 31/67 (46%), Positives = 36/67 (53%)
 Frame = +1

Query: 178 MLSNMGVHSLIGNXXXXXXXXXXXXXXXXXXXXXXXXASDRERELSIFRSGSAPPTVDGS 357
           MLS +G   +IGN                          DREREL+IFRSGSAPPTV+GS
Sbjct: 1   MLSELGRRPVIGNNEGCFGDELEKEIGMLLREQRRQEGDDRERELNIFRSGSAPPTVEGS 60

Query: 358 LAAVGGI 378
           L AVGG+
Sbjct: 61  LNAVGGL 67


>ref|XP_002278108.2| PREDICTED: pumilio homolog 1-like [Vitis vinifera]
          Length = 1015

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 25/30 (83%), Positives = 30/30 (100%)
 Frame = +1

Query: 289 ASDRERELSIFRSGSAPPTVDGSLAAVGGI 378
           ASDRE+ELSI+RSGSAPPTV+GSL+AVGG+
Sbjct: 42  ASDREKELSIYRSGSAPPTVEGSLSAVGGL 71


>ref|XP_006590974.1| PREDICTED: pumilio homolog 2-like isoform X1 [Glycine max]
           gi|571488572|ref|XP_006590975.1| PREDICTED: pumilio
           homolog 2-like isoform X2 [Glycine max]
          Length = 1047

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 29/67 (43%), Positives = 38/67 (56%)
 Frame = +1

Query: 178 MLSNMGVHSLIGNXXXXXXXXXXXXXXXXXXXXXXXXASDRERELSIFRSGSAPPTVDGS 357
           MLS +G   ++G+                        A DREREL+I+RSGSAPPTV+GS
Sbjct: 1   MLSELGRRPMLGSNEGSFGDELEKEIGMLLREQRRQEADDRERELNIYRSGSAPPTVEGS 60

Query: 358 LAAVGGI 378
           L+AVGG+
Sbjct: 61  LSAVGGL 67


>emb|CBI31647.3| unnamed protein product [Vitis vinifera]
          Length = 874

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 25/30 (83%), Positives = 30/30 (100%)
 Frame = +1

Query: 289 ASDRERELSIFRSGSAPPTVDGSLAAVGGI 378
           ASDRE+ELSI+RSGSAPPTV+GSL+AVGG+
Sbjct: 25  ASDREKELSIYRSGSAPPTVEGSLSAVGGL 54


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