BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00031567
         (233 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EXB41949.1| hypothetical protein L484_002200 [Morus notabilis]      72   8e-11
ref|XP_002526706.1| pentatricopeptide repeat-containing protein,...    72   8e-11
ref|XP_002265522.1| PREDICTED: putative pentatricopeptide repeat...    72   1e-10
gb|EEE70282.1| hypothetical protein OsJ_30444 [Oryza sativa Japo...    70   4e-10
gb|EEC85107.1| hypothetical protein OsI_32492 [Oryza sativa Indi...    70   4e-10
ref|NP_001064003.1| Os09g0573000 [Oryza sativa Japonica Group] g...    70   4e-10
ref|XP_003539649.2| PREDICTED: putative pentatricopeptide repeat...    69   9e-10
ref|XP_002309169.1| pentatricopeptide repeat-containing family p...    67   3e-09
ref|XP_004517144.1| PREDICTED: pentatricopeptide repeat-containi...    65   7e-09
ref|XP_004495476.1| PREDICTED: pentatricopeptide repeat-containi...    65   7e-09
ref|XP_004495468.1| PREDICTED: pentatricopeptide repeat-containi...    65   7e-09
gb|EOY19146.1| Pentatricopeptide repeat (PPR) superfamily protei...    65   1e-08
ref|XP_006341113.1| PREDICTED: putative pentatricopeptide repeat...    64   2e-08
ref|XP_004246883.1| PREDICTED: putative pentatricopeptide repeat...    63   4e-08
ref|XP_003592711.1| Pentatricopeptide repeat-containing protein ...    63   5e-08
ref|XP_006429514.1| hypothetical protein CICLE_v10011209mg [Citr...    62   6e-08
ref|XP_003572219.1| PREDICTED: pentatricopeptide repeat-containi...    62   6e-08
gb|AEP33768.1| organelle transcript processing 82, partial [Nast...    62   6e-08
gb|AEP33757.1| organelle transcript processing 82, partial [Aeth...    62   6e-08
gb|AEP33766.1| organelle transcript processing 82, partial [Lepi...    62   8e-08

>gb|EXB41949.1| hypothetical protein L484_002200 [Morus notabilis]
          Length = 688

 Score = 72.0 bits (175), Expect = 8e-11
 Identities = 37/71 (52%), Positives = 50/71 (70%)
 Frame = +1

Query: 19  SMVARGYAPNNYTFPFLLRAAARLPDNSSSVGLSLHASLVRRGLDCLDPFIVTSLVSLYA 198
           SM  +G+ PN +TFPF+L+A ARL D    +GL +H  +V+ G DC D F+ TSL+SLYA
Sbjct: 104 SMRRQGFLPNGFTFPFVLKACARLSD--FQLGLRIHTHVVKVGFDC-DVFVKTSLLSLYA 160

Query: 199 STGSVDDAHKV 231
            TG +D AH+V
Sbjct: 161 QTGYLDRAHQV 171


>ref|XP_002526706.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223534006|gb|EEF35728.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 461

 Score = 72.0 bits (175), Expect = 8e-11
 Identities = 37/77 (48%), Positives = 54/77 (70%)
 Frame = +1

Query: 1   SLSPFRSMVARGYAPNNYTFPFLLRAAARLPDNSSSVGLSLHASLVRRGLDCLDPFIVTS 180
           S+  + SM  +G+ PNN+TFPF+++A ARL D    +G+ +H  +V+ G DC + F+ TS
Sbjct: 98  SIEFYYSMRKKGFLPNNFTFPFVIKACARLLD--FQLGIMMHTLVVKLGFDC-NLFVNTS 154

Query: 181 LVSLYASTGSVDDAHKV 231
           LVSLYA  GS+DDA K+
Sbjct: 155 LVSLYAKCGSIDDALKM 171


>ref|XP_002265522.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g08820-like [Vitis vinifera]
          Length = 686

 Score = 71.6 bits (174), Expect = 1e-10
 Identities = 36/70 (51%), Positives = 49/70 (70%)
 Frame = +1

Query: 22  MVARGYAPNNYTFPFLLRAAARLPDNSSSVGLSLHASLVRRGLDCLDPFIVTSLVSLYAS 201
           M + G+ PNN+TFPF+L+A ARL D    +G+ +H  +V+ G DC D F+ TSLV LYA 
Sbjct: 103 MRSEGFLPNNFTFPFVLKACARLLD--LQLGVKIHTLVVKGGFDC-DVFVKTSLVCLYAK 159

Query: 202 TGSVDDAHKV 231
            G ++DAHKV
Sbjct: 160 CGYLEDAHKV 169


>gb|EEE70282.1| hypothetical protein OsJ_30444 [Oryza sativa Japonica Group]
          Length = 1082

 Score = 69.7 bits (169), Expect = 4e-10
 Identities = 41/85 (48%), Positives = 56/85 (65%), Gaps = 8/85 (9%)
 Frame = +1

Query: 1   SLSPFRSMVARGYA-PNNYTFPFLLRAAARLPDNSSS-------VGLSLHASLVRRGLDC 156
           ++S +RSM++   + PNNYT+P LL A ARL D+ SS        G++LHASL RRGL+ 
Sbjct: 72  AISLYRSMLSHSRSHPNNYTYPPLLAACARLADSDSSSAAAAAAAGVALHASLFRRGLES 131

Query: 157 LDPFIVTSLVSLYASTGSVDDAHKV 231
            D FI  SL+SLYA+ G +  A +V
Sbjct: 132 PDRFIRASLLSLYAAAGDLPAARQV 156


>gb|EEC85107.1| hypothetical protein OsI_32492 [Oryza sativa Indica Group]
          Length = 1073

 Score = 69.7 bits (169), Expect = 4e-10
 Identities = 41/85 (48%), Positives = 56/85 (65%), Gaps = 8/85 (9%)
 Frame = +1

Query: 1   SLSPFRSMVARGYA-PNNYTFPFLLRAAARLPDNSSS-------VGLSLHASLVRRGLDC 156
           ++S +RSM++   + PNNYT+P LL A ARL D+ SS        G++LHASL RRGL+ 
Sbjct: 72  AISLYRSMLSHSRSHPNNYTYPPLLAACARLADSDSSSAAAAAAAGVALHASLFRRGLES 131

Query: 157 LDPFIVTSLVSLYASTGSVDDAHKV 231
            D FI  SL+SLYA+ G +  A +V
Sbjct: 132 PDRFIRASLLSLYAAAGDLTAARQV 156


>ref|NP_001064003.1| Os09g0573000 [Oryza sativa Japonica Group]
           gi|113632236|dbj|BAF25917.1| Os09g0573000 [Oryza sativa
           Japonica Group]
          Length = 555

 Score = 69.7 bits (169), Expect = 4e-10
 Identities = 41/85 (48%), Positives = 56/85 (65%), Gaps = 8/85 (9%)
 Frame = +1

Query: 1   SLSPFRSMVARGYA-PNNYTFPFLLRAAARLPDNSSS-------VGLSLHASLVRRGLDC 156
           ++S +RSM++   + PNNYT+P LL A ARL D+ SS        G++LHASL RRGL+ 
Sbjct: 72  AISLYRSMLSHSRSHPNNYTYPPLLAACARLADSDSSSAAAAAAAGVALHASLFRRGLES 131

Query: 157 LDPFIVTSLVSLYASTGSVDDAHKV 231
            D FI  SL+SLYA+ G +  A +V
Sbjct: 132 PDRFIRASLLSLYAAAGDLPAARQV 156


>ref|XP_003539649.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g08820-like isoform X1 [Glycine max]
           gi|571494895|ref|XP_006592973.1| PREDICTED: putative
           pentatricopeptide repeat-containing protein
           At3g08820-like isoform X2 [Glycine max]
          Length = 681

 Score = 68.6 bits (166), Expect = 9e-10
 Identities = 36/77 (46%), Positives = 52/77 (67%)
 Frame = +1

Query: 1   SLSPFRSMVARGYAPNNYTFPFLLRAAARLPDNSSSVGLSLHASLVRRGLDCLDPFIVTS 180
           ++S + SM   G+AP+N+TFPF+L+A  RLP +   VGLSLH+ +++ G D  D F+ T 
Sbjct: 90  AVSVYASMRQHGFAPDNFTFPFVLKACTRLP-HYFHVGLSLHSLVIKTGFD-WDVFVKTG 147

Query: 181 LVSLYASTGSVDDAHKV 231
           LV LY+  G + DA KV
Sbjct: 148 LVCLYSKNGFLTDARKV 164


>ref|XP_002309169.1| pentatricopeptide repeat-containing family protein [Populus
           trichocarpa] gi|222855145|gb|EEE92692.1|
           pentatricopeptide repeat-containing family protein
           [Populus trichocarpa]
          Length = 619

 Score = 66.6 bits (161), Expect = 3e-09
 Identities = 36/77 (46%), Positives = 51/77 (66%)
 Frame = +1

Query: 1   SLSPFRSMVARGYAPNNYTFPFLLRAAARLPDNSSSVGLSLHASLVRRGLDCLDPFIVTS 180
           S+  + SM   G +P+++TFPFLL+A ARL D  S +G+ LH  +V+ G +  D F+ TS
Sbjct: 92  SIEIYHSMRKEGLSPDSFTFPFLLKACARLLD--SKLGIKLHGLVVKAGCES-DAFVNTS 148

Query: 181 LVSLYASTGSVDDAHKV 231
           LVSLY   G +D+A KV
Sbjct: 149 LVSLYGKCGFIDNAFKV 165


>ref|XP_004517144.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g08305-like, partial [Cicer arietinum]
          Length = 391

 Score = 65.5 bits (158), Expect = 7e-09
 Identities = 37/77 (48%), Positives = 51/77 (66%)
 Frame = +1

Query: 1   SLSPFRSMVARGYAPNNYTFPFLLRAAARLPDNSSSVGLSLHASLVRRGLDCLDPFIVTS 180
           SLS F  M   G APN  T+PFL++A+ARL +  S  G+SLHA +++ G +  D FI  S
Sbjct: 28  SLSIFLKMQQLGVAPNYLTYPFLVKASARLSNQES--GVSLHAQIIKTGHES-DIFIQNS 84

Query: 181 LVSLYASTGSVDDAHKV 231
           L+ +YAS G++  AHKV
Sbjct: 85  LIHMYASCGNIIGAHKV 101


>ref|XP_004495476.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g08305-like [Cicer arietinum]
          Length = 557

 Score = 65.5 bits (158), Expect = 7e-09
 Identities = 37/77 (48%), Positives = 51/77 (66%)
 Frame = +1

Query: 1   SLSPFRSMVARGYAPNNYTFPFLLRAAARLPDNSSSVGLSLHASLVRRGLDCLDPFIVTS 180
           SLS F  M   G APN  T+PFL++A+ARL +  S  G+SLHA +++ G +  D FI  S
Sbjct: 98  SLSIFLKMQQLGVAPNYLTYPFLVKASARLSNQES--GVSLHAQIIKTGHES-DIFIQNS 154

Query: 181 LVSLYASTGSVDDAHKV 231
           L+ +YAS G++  AHKV
Sbjct: 155 LIHMYASCGNIIGAHKV 171


>ref|XP_004495468.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g08305-like isoform X1 [Cicer arietinum]
           gi|502116515|ref|XP_004495469.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At5g08305-like isoform X2 [Cicer arietinum]
           gi|502116517|ref|XP_004495470.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At5g08305-like isoform X3 [Cicer arietinum]
           gi|502116519|ref|XP_004495471.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At5g08305-like isoform X4 [Cicer arietinum]
          Length = 549

 Score = 65.5 bits (158), Expect = 7e-09
 Identities = 37/77 (48%), Positives = 51/77 (66%)
 Frame = +1

Query: 1   SLSPFRSMVARGYAPNNYTFPFLLRAAARLPDNSSSVGLSLHASLVRRGLDCLDPFIVTS 180
           SLS F  M   G APN  T+PFL++A+ARL +  S  G+SLHA +++ G +  D FI  S
Sbjct: 98  SLSIFLKMQQLGVAPNYLTYPFLVKASARLSNQES--GVSLHAQIIKTGHES-DIFIQNS 154

Query: 181 LVSLYASTGSVDDAHKV 231
           L+ +YAS G++  AHKV
Sbjct: 155 LIHMYASCGNIIGAHKV 171


>gb|EOY19146.1| Pentatricopeptide repeat (PPR) superfamily protein, putative
           isoform 1 [Theobroma cacao] gi|508727250|gb|EOY19147.1|
           Pentatricopeptide repeat (PPR) superfamily protein,
           putative isoform 1 [Theobroma cacao]
          Length = 688

 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 34/73 (46%), Positives = 50/73 (68%)
 Frame = +1

Query: 13  FRSMVARGYAPNNYTFPFLLRAAARLPDNSSSVGLSLHASLVRRGLDCLDPFIVTSLVSL 192
           + SM ++G+ PN++TFPF+L+A ARL D    +G+ +HA +V+ G DC D F+ T L+ L
Sbjct: 102 YASMRSQGFLPNSFTFPFVLKAYARLLD--LQLGIRIHALVVKLGFDC-DIFVKTGLLCL 158

Query: 193 YASTGSVDDAHKV 231
           YA  G +D A KV
Sbjct: 159 YAKCGCLDRAIKV 171


>ref|XP_006341113.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g08820-like [Solanum tuberosum]
          Length = 687

 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 33/77 (42%), Positives = 47/77 (61%)
 Frame = +1

Query: 1   SLSPFRSMVARGYAPNNYTFPFLLRAAARLPDNSSSVGLSLHASLVRRGLDCLDPFIVTS 180
           S++ F  M   G+ PNN+TFPFLL++  RL D    +G+  H  +V+ G D  D F+ T 
Sbjct: 97  SIAYFHGMRNEGFLPNNFTFPFLLKSCTRLSD--FELGVKAHGLVVKGGFD-YDVFVKTG 153

Query: 181 LVSLYASTGSVDDAHKV 231
           LV  YA  G +DDAH++
Sbjct: 154 LVCFYARCGFLDDAHQM 170


>ref|XP_004246883.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g08820-like [Solanum lycopersicum]
          Length = 688

 Score = 63.2 bits (152), Expect = 4e-08
 Identities = 33/77 (42%), Positives = 46/77 (59%)
 Frame = +1

Query: 1   SLSPFRSMVARGYAPNNYTFPFLLRAAARLPDNSSSVGLSLHASLVRRGLDCLDPFIVTS 180
           S+  F  M   G+ PNN+TFPFLL++  RL D    +G+  H  +V+ G D  D F+ T 
Sbjct: 97  SIEFFHGMRNEGFLPNNFTFPFLLKSCTRLSD--FELGVKAHGLVVKGGFD-YDVFVKTG 153

Query: 181 LVSLYASTGSVDDAHKV 231
           LV  YA  G +DDAH++
Sbjct: 154 LVCFYARCGFLDDAHQM 170


>ref|XP_003592711.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355481759|gb|AES62962.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 550

 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 35/77 (45%), Positives = 51/77 (66%)
 Frame = +1

Query: 1   SLSPFRSMVARGYAPNNYTFPFLLRAAARLPDNSSSVGLSLHASLVRRGLDCLDPFIVTS 180
           SLS F  M+  G AP+  T+PFL++A+ARL    S  G+S+HA +++ G +  D FI  S
Sbjct: 98  SLSIFLKMLRHGVAPDYLTYPFLVKASARLSKQKS--GVSVHAQIIKTGHES-DRFIQNS 154

Query: 181 LVSLYASTGSVDDAHKV 231
           L+ +YAS G++  AHKV
Sbjct: 155 LIHMYASCGNIMWAHKV 171


>ref|XP_006429514.1| hypothetical protein CICLE_v10011209mg [Citrus clementina]
           gi|568855070|ref|XP_006481133.1| PREDICTED: putative
           pentatricopeptide repeat-containing protein
           At3g08820-like [Citrus sinensis]
           gi|557531571|gb|ESR42754.1| hypothetical protein
           CICLE_v10011209mg [Citrus clementina]
          Length = 688

 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 32/73 (43%), Positives = 48/73 (65%)
 Frame = +1

Query: 13  FRSMVARGYAPNNYTFPFLLRAAARLPDNSSSVGLSLHASLVRRGLDCLDPFIVTSLVSL 192
           + SM   G+ P N+TFPF+L+A AR  ++   +G+  H+ +V+ GLDC D F+ TSL++L
Sbjct: 102 YNSMRNEGFLPTNFTFPFVLKACAR--EHDFQLGVRSHSLIVKAGLDC-DEFVKTSLLNL 158

Query: 193 YASTGSVDDAHKV 231
           Y   G + DA KV
Sbjct: 159 YVHCGYLADALKV 171


>ref|XP_003572219.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Brachypodium distachyon]
          Length = 571

 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 35/78 (44%), Positives = 49/78 (62%), Gaps = 5/78 (6%)
 Frame = +1

Query: 13  FRSMVARGYA-PNNYTFPFLLRAAARL----PDNSSSVGLSLHASLVRRGLDCLDPFIVT 177
           +RSM+    + PNNYT+P LL A ARL    P   ++ G ++HASL RRGL+  D FI  
Sbjct: 80  YRSMLLNPLSNPNNYTYPPLLAACARLLPAHPPREAAAGTAVHASLFRRGLESRDRFISA 139

Query: 178 SLVSLYASTGSVDDAHKV 231
           S++S YA+ G +  A +V
Sbjct: 140 SMLSFYAAAGDLPAAREV 157


>gb|AEP33768.1| organelle transcript processing 82, partial [Nasturtium officinale]
          Length = 670

 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 31/77 (40%), Positives = 51/77 (66%)
 Frame = +1

Query: 1   SLSPFRSMVARGYAPNNYTFPFLLRAAARLPDNSSSVGLSLHASLVRRGLDCLDPFIVTS 180
           +L  +  M++ G  PN+YTFPFLL++ A+L   +S  GL +H  +++ G + LD ++ TS
Sbjct: 47  ALKLYVCMISLGLLPNSYTFPFLLKSCAKL--KASKEGLQIHGHVLKLGYE-LDLYVHTS 103

Query: 181 LVSLYASTGSVDDAHKV 231
           L+S+Y     ++DAHKV
Sbjct: 104 LISMYVQNERLEDAHKV 120


>gb|AEP33757.1| organelle transcript processing 82, partial [Aethionema
           cordifolium]
          Length = 679

 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 31/77 (40%), Positives = 52/77 (67%)
 Frame = +1

Query: 1   SLSPFRSMVARGYAPNNYTFPFLLRAAARLPDNSSSVGLSLHASLVRRGLDCLDPFIVTS 180
           +L+ +  M++ G +PN+YTFPFL ++ A+    ++  G  +HA +++ GL  +D  + TS
Sbjct: 62  ALNLYVYMISLGLSPNSYTFPFLFKSCAK--SKAAQEGKQIHAQILKYGLT-VDLHVHTS 118

Query: 181 LVSLYASTGSVDDAHKV 231
           L+S+YA  G V+DAHKV
Sbjct: 119 LISMYAQNGIVEDAHKV 135


>gb|AEP33766.1| organelle transcript processing 82, partial [Lepidium virginicum]
          Length = 464

 Score = 62.0 bits (149), Expect = 8e-08
 Identities = 31/77 (40%), Positives = 50/77 (64%)
 Frame = +1

Query: 1   SLSPFRSMVARGYAPNNYTFPFLLRAAARLPDNSSSVGLSLHASLVRRGLDCLDPFIVTS 180
           +L  +  M++ G  PN+Y+FPFLL++ A+    +   G  +H  +V+ G D LD ++ TS
Sbjct: 57  ALKLYVCMISLGLLPNSYSFPFLLKSCAK--SKAFREGQQIHGHVVKLGYD-LDMYVHTS 113

Query: 181 LVSLYASTGSVDDAHKV 231
           L+S+YA  G ++DAHKV
Sbjct: 114 LISMYAQNGRLEDAHKV 130