BLASTX nr result
ID: Zingiber24_contig00031509
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00031509
(637 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003577164.1| PREDICTED: DNA-directed RNA polymerase E sub... 140 2e-31
gb|EMT23234.1| DNA-directed RNA polymerase II subunit RPB1-B [Ae... 137 3e-30
ref|XP_004951807.1| PREDICTED: DNA-directed RNA polymerase E sub... 135 8e-30
gb|EEE56320.1| hypothetical protein OsJ_05410 [Oryza sativa Japo... 135 1e-29
gb|EEC72510.1| hypothetical protein OsI_05888 [Oryza sativa Indi... 135 1e-29
ref|NP_001045921.1| Os02g0152800 [Oryza sativa Japonica Group] g... 135 1e-29
ref|XP_004230024.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed... 132 8e-29
ref|XP_006646896.1| PREDICTED: DNA-directed RNA polymerase V sub... 132 1e-28
ref|XP_003541591.1| PREDICTED: DNA-directed RNA polymerase V sub... 130 2e-28
ref|XP_006470866.1| PREDICTED: DNA-directed RNA polymerase V sub... 129 9e-28
ref|XP_006420718.1| hypothetical protein CICLE_v10004129mg [Citr... 129 9e-28
emb|CBI40152.3| unnamed protein product [Vitis vinifera] 129 9e-28
ref|XP_002265533.1| PREDICTED: DNA-directed RNA polymerase E sub... 129 9e-28
ref|XP_006598109.1| PREDICTED: DNA-directed RNA polymerase V sub... 128 1e-27
gb|ESW05756.1| hypothetical protein PHAVU_011G206900g [Phaseolus... 128 2e-27
ref|XP_002513060.1| DNA-directed RNA polymerase, putative [Ricin... 127 2e-27
ref|XP_002303926.2| hypothetical protein POPTR_0003s19630g [Popu... 127 3e-27
gb|EMJ20080.1| hypothetical protein PRUPE_ppa000088mg [Prunus pe... 127 3e-27
ref|XP_004511031.1| PREDICTED: DNA-directed RNA polymerase E sub... 126 6e-27
ref|XP_004308588.1| PREDICTED: DNA-directed RNA polymerase E sub... 124 3e-26
>ref|XP_003577164.1| PREDICTED: DNA-directed RNA polymerase E subunit 1-like
[Brachypodium distachyon]
Length = 1935
Score = 140 bits (354), Expect = 2e-31
Identities = 62/91 (68%), Positives = 77/91 (84%)
Frame = -3
Query: 275 MENKLSSPLVLDGSVCNIKFSISTTEEIMTYSINECPISHPSQLANPFLGLPLESGRCES 96
ME S+ LV +G++ +IK S+ST +EI+TYSIN+CP++HPSQL NPFLGLPLE+G+CES
Sbjct: 1 MEEDQSAVLVAEGAIKSIKLSLSTEDEILTYSINDCPVTHPSQLGNPFLGLPLETGKCES 60
Query: 95 CGTAEIGNCEGHFGHIELPVAIYHPSHVSEL 3
CG +E G CEGHFG+IELPV IYHP HVSEL
Sbjct: 61 CGASENGKCEGHFGYIELPVPIYHPCHVSEL 91
>gb|EMT23234.1| DNA-directed RNA polymerase II subunit RPB1-B [Aegilops tauschii]
Length = 2017
Score = 137 bits (344), Expect = 3e-30
Identities = 61/90 (67%), Positives = 73/90 (81%)
Frame = -3
Query: 272 ENKLSSPLVLDGSVCNIKFSISTTEEIMTYSINECPISHPSQLANPFLGLPLESGRCESC 93
E S+ LV +G++ +IK S+ST EEI TYSIN+CP++HPSQL NPFLGLPLE+G+CESC
Sbjct: 47 EEDQSAVLVAEGAIKSIKLSLSTEEEICTYSINDCPVTHPSQLGNPFLGLPLETGKCESC 106
Query: 92 GTAEIGNCEGHFGHIELPVAIYHPSHVSEL 3
G E G CEGHFG IELPV +YHP HVSEL
Sbjct: 107 GATENGKCEGHFGFIELPVPVYHPCHVSEL 136
>ref|XP_004951807.1| PREDICTED: DNA-directed RNA polymerase E subunit 1-like [Setaria
italica]
Length = 2038
Score = 135 bits (341), Expect = 8e-30
Identities = 60/91 (65%), Positives = 75/91 (82%)
Frame = -3
Query: 275 MENKLSSPLVLDGSVCNIKFSISTTEEIMTYSINECPISHPSQLANPFLGLPLESGRCES 96
ME S+ L +G++ +IK S+ST EEI TYSIN+CP++HPSQLANPFLGLPLE+G+CE+
Sbjct: 1 MEEDQSAILFAEGAIKSIKLSLSTEEEICTYSINDCPVNHPSQLANPFLGLPLEAGKCEA 60
Query: 95 CGTAEIGNCEGHFGHIELPVAIYHPSHVSEL 3
CG +E CEGHFG+IELPV IYHP H+SEL
Sbjct: 61 CGASENDKCEGHFGYIELPVPIYHPCHISEL 91
>gb|EEE56320.1| hypothetical protein OsJ_05410 [Oryza sativa Japonica Group]
Length = 2017
Score = 135 bits (340), Expect = 1e-29
Identities = 60/91 (65%), Positives = 75/91 (82%)
Frame = -3
Query: 275 MENKLSSPLVLDGSVCNIKFSISTTEEIMTYSINECPISHPSQLANPFLGLPLESGRCES 96
ME S+ V +G++ +IK S+ST +EI TYSIN+CP++HPSQL NPFLGLPLE+G+CES
Sbjct: 1 MEEDQSAIPVAEGAIKSIKLSLSTEDEIRTYSINDCPVTHPSQLGNPFLGLPLETGKCES 60
Query: 95 CGTAEIGNCEGHFGHIELPVAIYHPSHVSEL 3
CG +E G CEGHFG+IELPV IYHP HV+EL
Sbjct: 61 CGASENGKCEGHFGYIELPVPIYHPCHVTEL 91
>gb|EEC72510.1| hypothetical protein OsI_05888 [Oryza sativa Indica Group]
Length = 1867
Score = 135 bits (340), Expect = 1e-29
Identities = 60/91 (65%), Positives = 75/91 (82%)
Frame = -3
Query: 275 MENKLSSPLVLDGSVCNIKFSISTTEEIMTYSINECPISHPSQLANPFLGLPLESGRCES 96
ME S+ V +G++ +IK S+ST +EI TYSIN+CP++HPSQL NPFLGLPLE+G+CES
Sbjct: 1 MEEDQSAIPVAEGAIKSIKLSLSTEDEIRTYSINDCPVTHPSQLGNPFLGLPLETGKCES 60
Query: 95 CGTAEIGNCEGHFGHIELPVAIYHPSHVSEL 3
CG +E G CEGHFG+IELPV IYHP HV+EL
Sbjct: 61 CGASENGKCEGHFGYIELPVPIYHPCHVTEL 91
>ref|NP_001045921.1| Os02g0152800 [Oryza sativa Japonica Group]
gi|113535452|dbj|BAF07835.1| Os02g0152800, partial
[Oryza sativa Japonica Group]
Length = 488
Score = 135 bits (340), Expect = 1e-29
Identities = 60/91 (65%), Positives = 75/91 (82%)
Frame = -3
Query: 275 MENKLSSPLVLDGSVCNIKFSISTTEEIMTYSINECPISHPSQLANPFLGLPLESGRCES 96
ME S+ V +G++ +IK S+ST +EI TYSIN+CP++HPSQL NPFLGLPLE+G+CES
Sbjct: 1 MEEDQSAIPVAEGAIKSIKLSLSTEDEIRTYSINDCPVTHPSQLGNPFLGLPLETGKCES 60
Query: 95 CGTAEIGNCEGHFGHIELPVAIYHPSHVSEL 3
CG +E G CEGHFG+IELPV IYHP HV+EL
Sbjct: 61 CGASENGKCEGHFGYIELPVPIYHPCHVTEL 91
>ref|XP_004230024.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase E
subunit 1 [Solanum lycopersicum]
Length = 1632
Score = 132 bits (332), Expect = 8e-29
Identities = 62/91 (68%), Positives = 71/91 (78%)
Frame = -3
Query: 275 MENKLSSPLVLDGSVCNIKFSISTTEEIMTYSINECPISHPSQLANPFLGLPLESGRCES 96
ME K S V DG V IKF ++T +EI SI++CPI+HPS L NPFLGLPLE+GRCES
Sbjct: 1 MEEKSLSSKVSDGIVKRIKFGLATPQEICKSSISDCPITHPSLLLNPFLGLPLEAGRCES 60
Query: 95 CGTAEIGNCEGHFGHIELPVAIYHPSHVSEL 3
CGTAE G CEGHFG+IELP+ IYHP HVSEL
Sbjct: 61 CGTAEPGQCEGHFGYIELPIPIYHPDHVSEL 91
>ref|XP_006646896.1| PREDICTED: DNA-directed RNA polymerase V subunit 1-like [Oryza
brachyantha]
Length = 1993
Score = 132 bits (331), Expect = 1e-28
Identities = 58/91 (63%), Positives = 74/91 (81%)
Frame = -3
Query: 275 MENKLSSPLVLDGSVCNIKFSISTTEEIMTYSINECPISHPSQLANPFLGLPLESGRCES 96
ME S+ V +G++ +IK S++T +EI YSIN+CP++HPSQL NPFLGLPLE+G+CES
Sbjct: 1 MEEDQSAIPVAEGAIKSIKLSLATEDEIRIYSINDCPVTHPSQLGNPFLGLPLETGKCES 60
Query: 95 CGTAEIGNCEGHFGHIELPVAIYHPSHVSEL 3
CG +E G CEGHFG+IELPV IYHP HV+EL
Sbjct: 61 CGASENGKCEGHFGYIELPVPIYHPCHVTEL 91
>ref|XP_003541591.1| PREDICTED: DNA-directed RNA polymerase V subunit 1-like [Glycine
max]
Length = 2020
Score = 130 bits (328), Expect = 2e-28
Identities = 59/82 (71%), Positives = 70/82 (85%)
Frame = -3
Query: 248 VLDGSVCNIKFSISTTEEIMTYSINECPISHPSQLANPFLGLPLESGRCESCGTAEIGNC 69
VLDG+V IKF ++T +EI T SI+E ISH SQL+NPFLGLPLE GRCESCGT+E+G C
Sbjct: 9 VLDGTVVGIKFGMATRQEICTASISESSISHASQLSNPFLGLPLEFGRCESCGTSEVGKC 68
Query: 68 EGHFGHIELPVAIYHPSHVSEL 3
EGHFG++ELPV IYHPSH+SEL
Sbjct: 69 EGHFGYVELPVPIYHPSHISEL 90
>ref|XP_006470866.1| PREDICTED: DNA-directed RNA polymerase V subunit 1-like [Citrus
sinensis]
Length = 1865
Score = 129 bits (323), Expect = 9e-28
Identities = 59/91 (64%), Positives = 73/91 (80%)
Frame = -3
Query: 275 MENKLSSPLVLDGSVCNIKFSISTTEEIMTYSINECPISHPSQLANPFLGLPLESGRCES 96
ME SS +L+G + I+F ++T +EI T SI++C ISH SQLANPFLGLPLE G+CES
Sbjct: 1 MEENTSST-ILEGQIVGIRFGLATQKEICTASISDCSISHASQLANPFLGLPLEFGKCES 59
Query: 95 CGTAEIGNCEGHFGHIELPVAIYHPSHVSEL 3
CGT+E G CEGHFG+IELP+ IYHPSH+SEL
Sbjct: 60 CGTSEPGKCEGHFGYIELPIPIYHPSHISEL 90
>ref|XP_006420718.1| hypothetical protein CICLE_v10004129mg [Citrus clementina]
gi|557522591|gb|ESR33958.1| hypothetical protein
CICLE_v10004129mg [Citrus clementina]
Length = 1867
Score = 129 bits (323), Expect = 9e-28
Identities = 59/91 (64%), Positives = 73/91 (80%)
Frame = -3
Query: 275 MENKLSSPLVLDGSVCNIKFSISTTEEIMTYSINECPISHPSQLANPFLGLPLESGRCES 96
ME SS +L+G + I+F ++T +EI T SI++C ISH SQLANPFLGLPLE G+CES
Sbjct: 1 MEENTSST-ILEGQIVGIRFGLATQKEICTASISDCSISHASQLANPFLGLPLEFGKCES 59
Query: 95 CGTAEIGNCEGHFGHIELPVAIYHPSHVSEL 3
CGT+E G CEGHFG+IELP+ IYHPSH+SEL
Sbjct: 60 CGTSEPGKCEGHFGYIELPIPIYHPSHISEL 90
>emb|CBI40152.3| unnamed protein product [Vitis vinifera]
Length = 1890
Score = 129 bits (323), Expect = 9e-28
Identities = 56/85 (65%), Positives = 68/85 (80%)
Frame = -3
Query: 257 SPLVLDGSVCNIKFSISTTEEIMTYSINECPISHPSQLANPFLGLPLESGRCESCGTAEI 78
S +LDG + I+F ++T +EI S+++CPISH SQL NPFLGLPLE G+CESCGTAE
Sbjct: 5 SSTILDGEISGIRFGLATRQEICIASVSDCPISHASQLTNPFLGLPLEFGKCESCGTAEP 64
Query: 77 GNCEGHFGHIELPVAIYHPSHVSEL 3
G CEGHFG+IELP+ IYHP HVSEL
Sbjct: 65 GQCEGHFGYIELPIPIYHPGHVSEL 89
>ref|XP_002265533.1| PREDICTED: DNA-directed RNA polymerase E subunit 1 [Vitis vinifera]
Length = 1830
Score = 129 bits (323), Expect = 9e-28
Identities = 56/85 (65%), Positives = 68/85 (80%)
Frame = -3
Query: 257 SPLVLDGSVCNIKFSISTTEEIMTYSINECPISHPSQLANPFLGLPLESGRCESCGTAEI 78
S +LDG + I+F ++T +EI S+++CPISH SQL NPFLGLPLE G+CESCGTAE
Sbjct: 5 SSTILDGEISGIRFGLATRQEICIASVSDCPISHASQLTNPFLGLPLEFGKCESCGTAEP 64
Query: 77 GNCEGHFGHIELPVAIYHPSHVSEL 3
G CEGHFG+IELP+ IYHP HVSEL
Sbjct: 65 GQCEGHFGYIELPIPIYHPGHVSEL 89
>ref|XP_006598109.1| PREDICTED: DNA-directed RNA polymerase V subunit 1-like [Glycine
max]
Length = 2082
Score = 128 bits (322), Expect = 1e-27
Identities = 57/82 (69%), Positives = 70/82 (85%)
Frame = -3
Query: 248 VLDGSVCNIKFSISTTEEIMTYSINECPISHPSQLANPFLGLPLESGRCESCGTAEIGNC 69
VLDG+V IKF ++T +EI T SI++ ISH SQL+NPFLGLPLE GRCESCGT+E+G C
Sbjct: 9 VLDGTVVGIKFGMATRQEICTASISDSSISHASQLSNPFLGLPLEFGRCESCGTSEVGKC 68
Query: 68 EGHFGHIELPVAIYHPSHVSEL 3
EGHFG+IELP+ IYHPSH+S+L
Sbjct: 69 EGHFGYIELPIPIYHPSHISDL 90
>gb|ESW05756.1| hypothetical protein PHAVU_011G206900g [Phaseolus vulgaris]
Length = 2052
Score = 128 bits (321), Expect = 2e-27
Identities = 62/90 (68%), Positives = 72/90 (80%)
Frame = -3
Query: 272 ENKLSSPLVLDGSVCNIKFSISTTEEIMTYSINECPISHPSQLANPFLGLPLESGRCESC 93
EN SS VLDG V +KF ++T +EI T SI++ ISH SQL+NPFLGLPLE GRCESC
Sbjct: 3 ENPPSS--VLDGMVVGVKFGMATRQEICTASISDSSISHASQLSNPFLGLPLEFGRCESC 60
Query: 92 GTAEIGNCEGHFGHIELPVAIYHPSHVSEL 3
GT+E G CEGHFG+IELPV IYHPSH+SEL
Sbjct: 61 GTSEAGKCEGHFGYIELPVPIYHPSHISEL 90
>ref|XP_002513060.1| DNA-directed RNA polymerase, putative [Ricinus communis]
gi|223548071|gb|EEF49563.1| DNA-directed RNA polymerase,
putative [Ricinus communis]
Length = 991
Score = 127 bits (320), Expect = 2e-27
Identities = 60/90 (66%), Positives = 71/90 (78%)
Frame = -3
Query: 272 ENKLSSPLVLDGSVCNIKFSISTTEEIMTYSINECPISHPSQLANPFLGLPLESGRCESC 93
EN SS L+G V IKF ++T +EI S+++CPISH SQL NPFLGLPLE G+CESC
Sbjct: 5 ENTQSS--FLEGEVVGIKFGLATYKEISAASVSDCPISHSSQLTNPFLGLPLEFGKCESC 62
Query: 92 GTAEIGNCEGHFGHIELPVAIYHPSHVSEL 3
GT+E G CEGHFG+IELP+ IYHPSHVSEL
Sbjct: 63 GTSEPGKCEGHFGYIELPIPIYHPSHVSEL 92
>ref|XP_002303926.2| hypothetical protein POPTR_0003s19630g [Populus trichocarpa]
gi|550343552|gb|EEE78905.2| hypothetical protein
POPTR_0003s19630g [Populus trichocarpa]
Length = 1920
Score = 127 bits (319), Expect = 3e-27
Identities = 58/90 (64%), Positives = 70/90 (77%)
Frame = -3
Query: 272 ENKLSSPLVLDGSVCNIKFSISTTEEIMTYSINECPISHPSQLANPFLGLPLESGRCESC 93
EN SS + DG + I+F ++T +EI T SI++CPISH SQL NPFLGLPLE G+CESC
Sbjct: 3 ENSQSS--IFDGEITGIRFGLATQKEICTASISDCPISHSSQLTNPFLGLPLEFGKCESC 60
Query: 92 GTAEIGNCEGHFGHIELPVAIYHPSHVSEL 3
GT+E G CEGHFG I LP+ IYHPSH+SEL
Sbjct: 61 GTSEPGKCEGHFGFIHLPIPIYHPSHISEL 90
>gb|EMJ20080.1| hypothetical protein PRUPE_ppa000088mg [Prunus persica]
Length = 1855
Score = 127 bits (319), Expect = 3e-27
Identities = 56/86 (65%), Positives = 70/86 (81%)
Frame = -3
Query: 260 SSPLVLDGSVCNIKFSISTTEEIMTYSINECPISHPSQLANPFLGLPLESGRCESCGTAE 81
SS +L+G + IKF ++T +EI T SI+ C ISH SQL+NPFLGLPLE G+CESCGT+E
Sbjct: 5 SSSTILEGEITGIKFGLATHQEICTASISNCAISHASQLSNPFLGLPLEFGKCESCGTSE 64
Query: 80 IGNCEGHFGHIELPVAIYHPSHVSEL 3
G CEGHFG+IELP+ I+HP+HVSEL
Sbjct: 65 AGKCEGHFGYIELPIPIFHPNHVSEL 90
>ref|XP_004511031.1| PREDICTED: DNA-directed RNA polymerase E subunit 1-like [Cicer
arietinum]
Length = 2263
Score = 126 bits (316), Expect = 6e-27
Identities = 62/90 (68%), Positives = 71/90 (78%)
Frame = -3
Query: 272 ENKLSSPLVLDGSVCNIKFSISTTEEIMTYSINECPISHPSQLANPFLGLPLESGRCESC 93
+N SS VLD V I+FS++T EI T SI++ ISH SQLANPFLGLPLE GRCESC
Sbjct: 3 DNPTSS--VLDAKVIGIRFSMATRHEISTASISDSTISHASQLANPFLGLPLEFGRCESC 60
Query: 92 GTAEIGNCEGHFGHIELPVAIYHPSHVSEL 3
GT+E G CEGHFG+IELPV IYHPSHV+EL
Sbjct: 61 GTSEAGKCEGHFGYIELPVPIYHPSHVTEL 90
>ref|XP_004308588.1| PREDICTED: DNA-directed RNA polymerase E subunit 1-like [Fragaria
vesca subsp. vesca]
Length = 1991
Score = 124 bits (310), Expect = 3e-26
Identities = 59/91 (64%), Positives = 71/91 (78%)
Frame = -3
Query: 275 MENKLSSPLVLDGSVCNIKFSISTTEEIMTYSINECPISHPSQLANPFLGLPLESGRCES 96
ME SP VLDG + I+F ++T +EI T S+ C ISH SQL+NPFLGLPLE G+CES
Sbjct: 1 MEEASCSP-VLDGELIGIRFGLATHQEICTASMMGCSISHASQLSNPFLGLPLEFGKCES 59
Query: 95 CGTAEIGNCEGHFGHIELPVAIYHPSHVSEL 3
CGT+E G CEGHFG+I+LPV IYHP+HVSEL
Sbjct: 60 CGTSEPGKCEGHFGYIDLPVPIYHPNHVSEL 90