BLASTX nr result
ID: Zingiber24_contig00031475
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00031475
(346 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006660761.1| PREDICTED: 60S ribosomal protein L9-like [Or... 50 4e-07
ref|NP_001063520.1| Os09g0485900 [Oryza sativa Japonica Group] g... 50 4e-07
dbj|BAA19798.1| YK426 [Oryza sativa (japonica cultivar-group)] 50 8e-07
ref|XP_004954554.1| PREDICTED: WAT1-related protein At3g30340-li... 48 1e-06
ref|XP_004964297.1| PREDICTED: 60S ribosomal protein L9-like [Se... 48 1e-06
ref|XP_002437682.1| hypothetical protein SORBIDRAFT_10g000700 [S... 47 6e-06
ref|NP_001150671.1| LOC100284304 [Zea mays] gi|195640976|gb|ACG3... 47 6e-06
gb|ACG24522.1| 60S ribosomal protein L9 [Zea mays] gi|195624144|... 47 6e-06
gb|AFW75225.1| hypothetical protein ZEAMMB73_023047 [Zea mays] 47 6e-06
>ref|XP_006660761.1| PREDICTED: 60S ribosomal protein L9-like [Oryza brachyantha]
gi|573957084|ref|XP_006660762.1| PREDICTED: 60S
ribosomal protein L9-like [Oryza brachyantha]
Length = 190
Score = 49.7 bits (117), Expect(2) = 4e-07
Identities = 31/78 (39%), Positives = 42/78 (53%), Gaps = 10/78 (12%)
Frame = -1
Query: 205 RDFKHLNPDFELFEGGRS*RRD----------AILTSIGHIQNPITGSQRGTAPR*VWTF 56
R+FKHLN DF+L EGGR + D AI T+I H+QN ITG +G + + +
Sbjct: 36 RNFKHLNLDFQLLEGGRKLQVDAWFGTRRTMAAIRTAISHVQNLITGVTKGYRYKMRFVY 95
Query: 55 GHGVNPPLPINAFFTTNS 2
H PINA T ++
Sbjct: 96 AH-----FPINASITNSN 108
Score = 30.0 bits (66), Expect(2) = 4e-07
Identities = 15/22 (68%), Positives = 17/22 (77%)
Frame = -3
Query: 275 EFVTVNVSSKVAEVEGLRGKLT 210
E VTV V++KV VEG RGKLT
Sbjct: 14 EGVTVQVAAKVVTVEGPRGKLT 35
>ref|NP_001063520.1| Os09g0485900 [Oryza sativa Japonica Group]
gi|109940148|sp|P49210.3|RL9_ORYSJ RecName: Full=60S
ribosomal protein L9 gi|582044897|pdb|3J61|H Chain H,
Localization Of The Large Subunit Ribosomal Proteins
Into A 5.5 A Cryo-em Map Of Triticum Aestivum
Translating 80s Ribosome gi|33087067|gb|AAP92747.1|
ribosomal L9-like protein [Oryza sativa Japonica Group]
gi|113631753|dbj|BAF25434.1| Os09g0485900 [Oryza sativa
Japonica Group] gi|125564174|gb|EAZ09554.1| hypothetical
protein OsI_31831 [Oryza sativa Indica Group]
gi|125606139|gb|EAZ45175.1| hypothetical protein
OsJ_29817 [Oryza sativa Japonica Group]
gi|149392689|gb|ABR26147.1| 60S ribosomal protein l9
[Oryza sativa Indica Group]
Length = 190
Score = 49.7 bits (117), Expect(2) = 4e-07
Identities = 31/78 (39%), Positives = 42/78 (53%), Gaps = 10/78 (12%)
Frame = -1
Query: 205 RDFKHLNPDFELFEGGRS*RRD----------AILTSIGHIQNPITGSQRGTAPR*VWTF 56
R+FKHLN DF+L EGGR + D AI T+I H+QN ITG +G + + +
Sbjct: 36 RNFKHLNLDFQLLEGGRKLQVDAWFGTRRTMAAIRTAISHVQNLITGVTKGYRYKMRFVY 95
Query: 55 GHGVNPPLPINAFFTTNS 2
H PINA T ++
Sbjct: 96 AH-----FPINASITNSN 108
Score = 30.0 bits (66), Expect(2) = 4e-07
Identities = 15/22 (68%), Positives = 17/22 (77%)
Frame = -3
Query: 275 EFVTVNVSSKVAEVEGLRGKLT 210
E VTV V++KV VEG RGKLT
Sbjct: 14 EGVTVQVAAKVVTVEGPRGKLT 35
>dbj|BAA19798.1| YK426 [Oryza sativa (japonica cultivar-group)]
Length = 190
Score = 49.7 bits (117), Expect(2) = 8e-07
Identities = 31/78 (39%), Positives = 42/78 (53%), Gaps = 10/78 (12%)
Frame = -1
Query: 205 RDFKHLNPDFELFEGGRS*RRD----------AILTSIGHIQNPITGSQRGTAPR*VWTF 56
R+FKHLN DF+L EGGR + D AI T+I H+QN ITG +G + + +
Sbjct: 36 RNFKHLNLDFQLLEGGRKLQVDAWFGTRRTMAAIRTAISHVQNLITGVTKGYRYKMRFVY 95
Query: 55 GHGVNPPLPINAFFTTNS 2
H PINA T ++
Sbjct: 96 AH-----FPINASITNSN 108
Score = 28.9 bits (63), Expect(2) = 8e-07
Identities = 14/22 (63%), Positives = 17/22 (77%)
Frame = -3
Query: 275 EFVTVNVSSKVAEVEGLRGKLT 210
E +TV V++KV VEG RGKLT
Sbjct: 14 EGLTVQVAAKVVTVEGPRGKLT 35
>ref|XP_004954554.1| PREDICTED: WAT1-related protein At3g30340-like [Setaria italica]
Length = 613
Score = 48.1 bits (113), Expect(2) = 1e-06
Identities = 31/75 (41%), Positives = 40/75 (53%), Gaps = 10/75 (13%)
Frame = -1
Query: 205 RDFKHLNPDFELFEGGRS*RRD----------AILTSIGHIQNPITGSQRGTAPR*VWTF 56
R+FKHLN DF+L EGGR + D AI T+I H+QN ITG +G + + +
Sbjct: 36 RNFKHLNLDFQLQEGGRKLKVDAWFGTRRTMAAIRTAISHVQNLITGVTKGYRYKMRFVY 95
Query: 55 GHGVNPPLPINAFFT 11
H PINA T
Sbjct: 96 AH-----FPINASIT 105
Score = 30.0 bits (66), Expect(2) = 1e-06
Identities = 15/22 (68%), Positives = 17/22 (77%)
Frame = -3
Query: 275 EFVTVNVSSKVAEVEGLRGKLT 210
E VTV V++KV VEG RGKLT
Sbjct: 14 EEVTVKVAAKVVTVEGPRGKLT 35
>ref|XP_004964297.1| PREDICTED: 60S ribosomal protein L9-like [Setaria italica]
Length = 190
Score = 48.1 bits (113), Expect(2) = 1e-06
Identities = 31/75 (41%), Positives = 40/75 (53%), Gaps = 10/75 (13%)
Frame = -1
Query: 205 RDFKHLNPDFELFEGGRS*RRD----------AILTSIGHIQNPITGSQRGTAPR*VWTF 56
R+FKHLN DF+L EGGR + D AI T+I H+QN ITG +G + + +
Sbjct: 36 RNFKHLNLDFQLQEGGRKLKVDAWFGTRRTMAAIRTAISHVQNLITGVTKGYRYKMRFVY 95
Query: 55 GHGVNPPLPINAFFT 11
H PINA T
Sbjct: 96 AH-----FPINASIT 105
Score = 30.0 bits (66), Expect(2) = 1e-06
Identities = 15/22 (68%), Positives = 17/22 (77%)
Frame = -3
Query: 275 EFVTVNVSSKVAEVEGLRGKLT 210
E VTV V++KV VEG RGKLT
Sbjct: 14 EEVTVKVAAKVVTVEGPRGKLT 35
>ref|XP_002437682.1| hypothetical protein SORBIDRAFT_10g000700 [Sorghum bicolor]
gi|241915905|gb|EER89049.1| hypothetical protein
SORBIDRAFT_10g000700 [Sorghum bicolor]
Length = 190
Score = 46.6 bits (109), Expect(2) = 6e-06
Identities = 30/78 (38%), Positives = 41/78 (52%), Gaps = 10/78 (12%)
Frame = -1
Query: 205 RDFKHLNPDFELFEGGRS*RRD----------AILTSIGHIQNPITGSQRGTAPR*VWTF 56
R+FKHLN DF+L EGGR + D AI T+I H+QN I G +G + + +
Sbjct: 36 RNFKHLNLDFQLQEGGRKLKVDAWFGTRRTMAAIRTAISHVQNLIKGVTKGYRYKMRFVY 95
Query: 55 GHGVNPPLPINAFFTTNS 2
H PINA T ++
Sbjct: 96 AH-----FPINASITNSN 108
Score = 28.9 bits (63), Expect(2) = 6e-06
Identities = 14/22 (63%), Positives = 17/22 (77%)
Frame = -3
Query: 275 EFVTVNVSSKVAEVEGLRGKLT 210
E VTV V++K+ VEG RGKLT
Sbjct: 14 EGVTVTVAAKLVTVEGPRGKLT 35
>ref|NP_001150671.1| LOC100284304 [Zea mays] gi|195640976|gb|ACG39956.1| 60S ribosomal
protein L9 [Zea mays]
Length = 190
Score = 46.6 bits (109), Expect(2) = 6e-06
Identities = 30/78 (38%), Positives = 41/78 (52%), Gaps = 10/78 (12%)
Frame = -1
Query: 205 RDFKHLNPDFELFEGGRS*RRD----------AILTSIGHIQNPITGSQRGTAPR*VWTF 56
R+FKHLN DF+L EGGR + D AI T+I H+QN I G +G + + +
Sbjct: 36 RNFKHLNLDFQLQEGGRKLKVDAWFGTRRTMAAIRTAISHVQNLIKGVTKGYRYKMRFVY 95
Query: 55 GHGVNPPLPINAFFTTNS 2
H PINA T ++
Sbjct: 96 AH-----FPINASITNSN 108
Score = 28.9 bits (63), Expect(2) = 6e-06
Identities = 14/22 (63%), Positives = 17/22 (77%)
Frame = -3
Query: 275 EFVTVNVSSKVAEVEGLRGKLT 210
E VTV V++K+ VEG RGKLT
Sbjct: 14 EGVTVTVAAKLVTVEGPRGKLT 35
>gb|ACG24522.1| 60S ribosomal protein L9 [Zea mays] gi|195624144|gb|ACG33902.1| 60S
ribosomal protein L9 [Zea mays]
gi|413942577|gb|AFW75226.1| 60S ribosomal protein L9
[Zea mays]
Length = 190
Score = 46.6 bits (109), Expect(2) = 6e-06
Identities = 30/78 (38%), Positives = 41/78 (52%), Gaps = 10/78 (12%)
Frame = -1
Query: 205 RDFKHLNPDFELFEGGRS*RRD----------AILTSIGHIQNPITGSQRGTAPR*VWTF 56
R+FKHLN DF+L EGGR + D AI T+I H+QN I G +G + + +
Sbjct: 36 RNFKHLNLDFQLQEGGRKLKVDAWFGTRRTMAAIRTAISHVQNLIKGVTKGYRYKMRFVY 95
Query: 55 GHGVNPPLPINAFFTTNS 2
H PINA T ++
Sbjct: 96 AH-----FPINASITNSN 108
Score = 28.9 bits (63), Expect(2) = 6e-06
Identities = 14/22 (63%), Positives = 17/22 (77%)
Frame = -3
Query: 275 EFVTVNVSSKVAEVEGLRGKLT 210
E VTV V++K+ VEG RGKLT
Sbjct: 14 EGVTVTVAAKLVTVEGPRGKLT 35
>gb|AFW75225.1| hypothetical protein ZEAMMB73_023047 [Zea mays]
Length = 171
Score = 46.6 bits (109), Expect(2) = 6e-06
Identities = 30/78 (38%), Positives = 41/78 (52%), Gaps = 10/78 (12%)
Frame = -1
Query: 205 RDFKHLNPDFELFEGGRS*RRD----------AILTSIGHIQNPITGSQRGTAPR*VWTF 56
R+FKHLN DF+L EGGR + D AI T+I H+QN I G +G + + +
Sbjct: 36 RNFKHLNLDFQLQEGGRKLKVDAWFGTRRTMAAIRTAISHVQNLIKGVTKGYRYKMRFVY 95
Query: 55 GHGVNPPLPINAFFTTNS 2
H PINA T ++
Sbjct: 96 AH-----FPINASITNSN 108
Score = 28.9 bits (63), Expect(2) = 6e-06
Identities = 14/22 (63%), Positives = 17/22 (77%)
Frame = -3
Query: 275 EFVTVNVSSKVAEVEGLRGKLT 210
E VTV V++K+ VEG RGKLT
Sbjct: 14 EGVTVTVAAKLVTVEGPRGKLT 35