BLASTX nr result
ID: Zingiber24_contig00031458
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00031458
(262 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006829099.1| hypothetical protein AMTR_s00001p00263220 [A... 101 9e-20
ref|XP_006343948.1| PREDICTED: E3 ubiquitin-protein ligase RHA1B... 101 1e-19
ref|XP_004245579.1| PREDICTED: E3 ubiquitin-protein ligase RHA1B... 101 1e-19
ref|XP_004510759.1| PREDICTED: E3 ubiquitin-protein ligase RHA1B... 99 8e-19
ref|XP_002448374.1| hypothetical protein SORBIDRAFT_06g026220 [S... 97 2e-18
gb|ESW30511.1| hypothetical protein PHAVU_002G158800g [Phaseolus... 97 3e-18
ref|XP_006439498.1| hypothetical protein CICLE_v10024600mg [Citr... 96 4e-18
ref|XP_003517474.1| PREDICTED: E3 ubiquitin-protein ligase RHA1B... 96 5e-18
ref|NP_001150789.1| RING zinc finger protein-like [Zea mays] gi|... 96 7e-18
dbj|BAK02114.1| predicted protein [Hordeum vulgare subsp. vulgare] 95 9e-18
ref|XP_006590507.1| PREDICTED: RING-H2 zinc finger protein RHA1a... 95 1e-17
ref|XP_004298823.1| PREDICTED: E3 ubiquitin-protein ligase RHA1B... 95 1e-17
ref|XP_004143977.1| PREDICTED: RING-H2 zinc finger protein RHA1a... 95 1e-17
ref|XP_003622508.1| RING-H2 finger protein ATL2C [Medicago trunc... 95 1e-17
ref|XP_002298018.2| hypothetical protein POPTR_0001s09700g [Popu... 94 1e-17
ref|NP_191705.1| brassinosteroid-responsive RING-H2 [Arabidopsis... 94 2e-17
ref|XP_006402478.1| hypothetical protein EUTSA_v10006258mg [Eutr... 94 2e-17
gb|EMJ10904.1| hypothetical protein PRUPE_ppa012459mg [Prunus pe... 94 2e-17
gb|EXB37315.1| RING-H2 zinc finger protein RHA1a [Morus notabilis] 93 3e-17
ref|XP_002304513.2| hypothetical protein POPTR_0003s13080g [Popu... 93 3e-17
>ref|XP_006829099.1| hypothetical protein AMTR_s00001p00263220 [Amborella trichopoda]
gi|548834078|gb|ERM96515.1| hypothetical protein
AMTR_s00001p00263220 [Amborella trichopoda]
Length = 166
Score = 101 bits (252), Expect = 9e-20
Identities = 45/80 (56%), Positives = 57/80 (71%), Gaps = 2/80 (2%)
Frame = +1
Query: 13 LLPLVLAEVIEEASPATRFEQLPEA--AESCCAVCLYEFEPEDEVRRMSDCRHIFHRHCV 186
+ P V A +I E P RFE+L +A A CAVCLYEFE +E+RR+++C HIFHR C+
Sbjct: 58 VFPSVSAILIREILPVVRFEELTDAFHASESCAVCLYEFEGREEIRRLANCCHIFHRSCL 117
Query: 187 DRWLEHGQCTCPLCRAPLFP 246
DRW++H Q TCPLCR PL P
Sbjct: 118 DRWMDHDQKTCPLCRTPLVP 137
>ref|XP_006343948.1| PREDICTED: E3 ubiquitin-protein ligase RHA1B-like [Solanum
tuberosum]
Length = 165
Score = 101 bits (251), Expect = 1e-19
Identities = 43/74 (58%), Positives = 55/74 (74%)
Frame = +1
Query: 25 VLAEVIEEASPATRFEQLPEAAESCCAVCLYEFEPEDEVRRMSDCRHIFHRHCVDRWLEH 204
V A +I E P +F +L + ESC AVCLYEF+ EDE+RR+++CRHIFHR C+DRW++H
Sbjct: 62 VSAALIRELLPVVKFSELVDPPESC-AVCLYEFDGEDEIRRLTNCRHIFHRSCLDRWMDH 120
Query: 205 GQCTCPLCRAPLFP 246
Q TCPLCR P P
Sbjct: 121 DQKTCPLCRTPFIP 134
>ref|XP_004245579.1| PREDICTED: E3 ubiquitin-protein ligase RHA1B-like [Solanum
lycopersicum]
Length = 165
Score = 101 bits (251), Expect = 1e-19
Identities = 43/74 (58%), Positives = 55/74 (74%)
Frame = +1
Query: 25 VLAEVIEEASPATRFEQLPEAAESCCAVCLYEFEPEDEVRRMSDCRHIFHRHCVDRWLEH 204
V A +I E P +F +L + ESC AVCLYEF+ EDE+RR+++CRHIFHR C+DRW++H
Sbjct: 62 VSAALIRELLPVVKFSELVDPPESC-AVCLYEFDGEDEIRRLTNCRHIFHRSCLDRWMDH 120
Query: 205 GQCTCPLCRAPLFP 246
Q TCPLCR P P
Sbjct: 121 DQKTCPLCRTPFIP 134
>ref|XP_004510759.1| PREDICTED: E3 ubiquitin-protein ligase RHA1B-like [Cicer arietinum]
Length = 173
Score = 98.6 bits (244), Expect = 8e-19
Identities = 43/77 (55%), Positives = 55/77 (71%), Gaps = 1/77 (1%)
Frame = +1
Query: 19 PLVLAEVIEEASPATRFEQLPEAAESCC-AVCLYEFEPEDEVRRMSDCRHIFHRHCVDRW 195
P V A +I+E PA++F L E CC AVCL+EF E+E+R + +CRHIFHR+CVDRW
Sbjct: 66 PSVSALLIQELLPASKFGDLVGVEEGCCCAVCLFEFSEEEEIRCLRNCRHIFHRNCVDRW 125
Query: 196 LEHGQCTCPLCRAPLFP 246
++H Q TCPLCR P P
Sbjct: 126 IDHDQKTCPLCRTPFVP 142
>ref|XP_002448374.1| hypothetical protein SORBIDRAFT_06g026220 [Sorghum bicolor]
gi|241939557|gb|EES12702.1| hypothetical protein
SORBIDRAFT_06g026220 [Sorghum bicolor]
Length = 194
Score = 97.4 bits (241), Expect = 2e-18
Identities = 46/75 (61%), Positives = 53/75 (70%), Gaps = 1/75 (1%)
Frame = +1
Query: 25 VLAEVIEEASPATRFEQLPEA-AESCCAVCLYEFEPEDEVRRMSDCRHIFHRHCVDRWLE 201
V A VIEE P RF++L EA CAVCL DEVRR+S+CRH+FHR C+DRW+E
Sbjct: 66 VPAMVIEEVLPVVRFDELEEARVGGDCAVCLSGIGGRDEVRRLSNCRHVFHRACLDRWME 125
Query: 202 HGQCTCPLCRAPLFP 246
H Q TCPLCRAPL P
Sbjct: 126 HDQRTCPLCRAPLIP 140
>gb|ESW30511.1| hypothetical protein PHAVU_002G158800g [Phaseolus vulgaris]
Length = 227
Score = 96.7 bits (239), Expect = 3e-18
Identities = 44/74 (59%), Positives = 55/74 (74%), Gaps = 2/74 (2%)
Frame = +1
Query: 31 AEVIEEASPATRFEQLP--EAAESCCAVCLYEFEPEDEVRRMSDCRHIFHRHCVDRWLEH 204
A +I E P +F ++ EAAESC AVCLYEFE EDE+RR+++CRHIFHR C+DRW+ +
Sbjct: 130 AVLIREILPVVKFSEMAAAEAAESC-AVCLYEFEGEDEIRRLTNCRHIFHRGCLDRWMGY 188
Query: 205 GQCTCPLCRAPLFP 246
Q TCPLCR P P
Sbjct: 189 DQRTCPLCRTPFIP 202
>ref|XP_006439498.1| hypothetical protein CICLE_v10024600mg [Citrus clementina]
gi|568845310|ref|XP_006476519.1| PREDICTED: E3
ubiquitin-protein ligase RHA1B-like [Citrus sinensis]
gi|557541760|gb|ESR52738.1| hypothetical protein
CICLE_v10024600mg [Citrus clementina]
Length = 171
Score = 96.3 bits (238), Expect = 4e-18
Identities = 44/79 (55%), Positives = 57/79 (72%), Gaps = 1/79 (1%)
Frame = +1
Query: 13 LLPL-VLAEVIEEASPATRFEQLPEAAESCCAVCLYEFEPEDEVRRMSDCRHIFHRHCVD 189
L PL V A +I E P +F +L + +SC AVCLYEFE +DE+RR+++CRHIFHR C+D
Sbjct: 59 LRPLSVSALLIREILPVVKFSELVDPPDSC-AVCLYEFEEQDEIRRLTNCRHIFHRGCLD 117
Query: 190 RWLEHGQCTCPLCRAPLFP 246
RW+ + Q TCPLCR P P
Sbjct: 118 RWMAYDQKTCPLCRTPFIP 136
>ref|XP_003517474.1| PREDICTED: E3 ubiquitin-protein ligase RHA1B-like [Glycine max]
Length = 141
Score = 95.9 bits (237), Expect = 5e-18
Identities = 44/77 (57%), Positives = 56/77 (72%), Gaps = 3/77 (3%)
Frame = +1
Query: 25 VLAEVIEEASPATRFEQLP---EAAESCCAVCLYEFEPEDEVRRMSDCRHIFHRHCVDRW 195
V A ++ E P +F ++ EAAESC AVCLYEFE EDE+RR+++CRHIFHR C+DRW
Sbjct: 54 VSAVLMREILPVVKFSEMEMAVEAAESC-AVCLYEFEGEDEIRRLTNCRHIFHRGCLDRW 112
Query: 196 LEHGQCTCPLCRAPLFP 246
+ + Q TCPLCR P P
Sbjct: 113 MGYDQRTCPLCRTPFIP 129
>ref|NP_001150789.1| RING zinc finger protein-like [Zea mays]
gi|195641850|gb|ACG40393.1| RING zinc finger
protein-like [Zea mays] gi|414585776|tpg|DAA36347.1|
TPA: putative RING zinc finger domain superfamily
protein [Zea mays]
Length = 213
Score = 95.5 bits (236), Expect = 7e-18
Identities = 45/75 (60%), Positives = 52/75 (69%), Gaps = 1/75 (1%)
Frame = +1
Query: 25 VLAEVIEEASPATRFEQLP-EAAESCCAVCLYEFEPEDEVRRMSDCRHIFHRHCVDRWLE 201
V A VIEE P RF++L E CAVCL DEVRR+S+CRH+FHR C+DRW+E
Sbjct: 87 VPAMVIEEVLPVVRFDELELEPEPGDCAVCLSGIGGRDEVRRLSNCRHVFHRACLDRWME 146
Query: 202 HGQCTCPLCRAPLFP 246
H Q TCPLCRAPL P
Sbjct: 147 HDQRTCPLCRAPLIP 161
>dbj|BAK02114.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 205
Score = 95.1 bits (235), Expect = 9e-18
Identities = 45/76 (59%), Positives = 53/76 (69%), Gaps = 2/76 (2%)
Frame = +1
Query: 25 VLAEVIEEASPATRFEQLPEAA--ESCCAVCLYEFEPEDEVRRMSDCRHIFHRHCVDRWL 198
V A VIEE P RF++L AA + CAVCL DEVRR+++CRH FHR C+DRW+
Sbjct: 80 VTAMVIEEVLPVVRFDELDAAACVDGDCAVCLSGIGGGDEVRRLTNCRHAFHRGCLDRWM 139
Query: 199 EHGQCTCPLCRAPLFP 246
EH Q TCPLCRAPL P
Sbjct: 140 EHDQRTCPLCRAPLIP 155
>ref|XP_006590507.1| PREDICTED: RING-H2 zinc finger protein RHA1a-like [Glycine max]
Length = 160
Score = 94.7 bits (234), Expect = 1e-17
Identities = 44/78 (56%), Positives = 55/78 (70%), Gaps = 4/78 (5%)
Frame = +1
Query: 25 VLAEVIEEASPATRFEQLP----EAAESCCAVCLYEFEPEDEVRRMSDCRHIFHRHCVDR 192
V A +I E P +F ++ EA ESC AVCLYEFE EDE+RR+++CRHIFHR C+DR
Sbjct: 59 VWAVLIREILPVVKFSEMEMEMAEAPESC-AVCLYEFEGEDEIRRLTNCRHIFHRGCLDR 117
Query: 193 WLEHGQCTCPLCRAPLFP 246
W+ + Q TCPLCR P P
Sbjct: 118 WMGYDQRTCPLCRTPFIP 135
>ref|XP_004298823.1| PREDICTED: E3 ubiquitin-protein ligase RHA1B-like [Fragaria vesca
subsp. vesca]
Length = 168
Score = 94.7 bits (234), Expect = 1e-17
Identities = 42/74 (56%), Positives = 53/74 (71%)
Frame = +1
Query: 25 VLAEVIEEASPATRFEQLPEAAESCCAVCLYEFEPEDEVRRMSDCRHIFHRHCVDRWLEH 204
V A +I E P +F L + ESC AVCLYEFE +D+VRR+++CRHIFH+ CVDRW+ +
Sbjct: 64 VSALLIRELLPVVKFSDLVDPPESC-AVCLYEFEADDDVRRLTNCRHIFHKGCVDRWVGY 122
Query: 205 GQCTCPLCRAPLFP 246
Q TCPLCR P P
Sbjct: 123 DQKTCPLCRTPFIP 136
>ref|XP_004143977.1| PREDICTED: RING-H2 zinc finger protein RHA1a-like, partial [Cucumis
sativus]
Length = 117
Score = 94.7 bits (234), Expect = 1e-17
Identities = 39/72 (54%), Positives = 52/72 (72%)
Frame = +1
Query: 31 AEVIEEASPATRFEQLPEAAESCCAVCLYEFEPEDEVRRMSDCRHIFHRHCVDRWLEHGQ 210
A ++ E P +F L + + CCAVCLYEFE +DE+RR+++CRHIFHR C+DRW+ +GQ
Sbjct: 7 AALLREILPVVKFSDLLDPPD-CCAVCLYEFESDDEIRRLANCRHIFHRGCLDRWIGYGQ 65
Query: 211 CTCPLCRAPLFP 246
TCPLCR P
Sbjct: 66 RTCPLCRTVFIP 77
>ref|XP_003622508.1| RING-H2 finger protein ATL2C [Medicago truncatula]
gi|355497523|gb|AES78726.1| RING-H2 finger protein ATL2C
[Medicago truncatula]
Length = 381
Score = 94.7 bits (234), Expect = 1e-17
Identities = 42/80 (52%), Positives = 55/80 (68%), Gaps = 1/80 (1%)
Frame = +1
Query: 10 CLLPLVLAEVIEEASPATRFEQLPEAAESCC-AVCLYEFEPEDEVRRMSDCRHIFHRHCV 186
C P V A +I E PAT++ +L + E CC AVCL+EF E+E+R + +CRHIFHR+CV
Sbjct: 61 CKNPSVSALLIREFLPATKYGELTDTEEGCCCAVCLFEFSEEEEIRCLKNCRHIFHRNCV 120
Query: 187 DRWLEHGQCTCPLCRAPLFP 246
DRW++ Q TCPLCR P
Sbjct: 121 DRWIDLDQKTCPLCRTGFVP 140
>ref|XP_002298018.2| hypothetical protein POPTR_0001s09700g [Populus trichocarpa]
gi|550346911|gb|EEE82823.2| hypothetical protein
POPTR_0001s09700g [Populus trichocarpa]
Length = 154
Score = 94.4 bits (233), Expect = 1e-17
Identities = 35/64 (54%), Positives = 49/64 (76%)
Frame = +1
Query: 55 PATRFEQLPEAAESCCAVCLYEFEPEDEVRRMSDCRHIFHRHCVDRWLEHGQCTCPLCRA 234
P +F +L + + CCAVCLYEF+ DE+RR+++CRHIFH+ C+DRW+ + Q TCPLCR
Sbjct: 61 PVVKFSELVDPSADCCAVCLYEFKEVDEIRRLANCRHIFHKCCLDRWMGYDQITCPLCRT 120
Query: 235 PLFP 246
P+ P
Sbjct: 121 PVIP 124
>ref|NP_191705.1| brassinosteroid-responsive RING-H2 [Arabidopsis thaliana]
gi|297820998|ref|XP_002878382.1|
brassinosteroid-responsive ring-H2 [Arabidopsis lyrata
subsp. lyrata] gi|4689366|gb|AAD27870.1|AF134155_1 BRH1
RING finger protein [Arabidopsis thaliana]
gi|6850837|emb|CAB71076.1| RING finger protein
[Arabidopsis thaliana] gi|17644157|gb|AAL38776.1|
putative RING finger protein [Arabidopsis thaliana]
gi|21436189|gb|AAM51382.1| putative RING finger protein
[Arabidopsis thaliana] gi|21554590|gb|AAM63625.1| RING
finger protein [Arabidopsis thaliana]
gi|297324220|gb|EFH54641.1| brassinosteroid-responsive
ring-H2 [Arabidopsis lyrata subsp. lyrata]
gi|332646687|gb|AEE80208.1| brassinosteroid-responsive
RING-H2 [Arabidopsis thaliana]
Length = 170
Score = 94.0 bits (232), Expect = 2e-17
Identities = 41/75 (54%), Positives = 51/75 (68%), Gaps = 3/75 (4%)
Frame = +1
Query: 31 AEVIEEASPATRFEQLPEAAESC---CAVCLYEFEPEDEVRRMSDCRHIFHRHCVDRWLE 201
A +I E P +FE+L + E CAVCLYEFE E E+R + +CRHIFHR C+DRW++
Sbjct: 68 ALLIREILPVIKFEELTNSGEDLPENCAVCLYEFEGEQEIRWLRNCRHIFHRSCLDRWMD 127
Query: 202 HGQCTCPLCRAPLFP 246
H Q TCPLCR P P
Sbjct: 128 HDQKTCPLCRTPFVP 142
>ref|XP_006402478.1| hypothetical protein EUTSA_v10006258mg [Eutrema salsugineum]
gi|557103577|gb|ESQ43931.1| hypothetical protein
EUTSA_v10006258mg [Eutrema salsugineum]
Length = 185
Score = 93.6 bits (231), Expect = 2e-17
Identities = 41/75 (54%), Positives = 51/75 (68%), Gaps = 3/75 (4%)
Frame = +1
Query: 31 AEVIEEASPATRFEQLPEAAESC---CAVCLYEFEPEDEVRRMSDCRHIFHRHCVDRWLE 201
A +I E P +FE+L + E CAVCLYEFE E E+R + +CRHIFHR C+DRW++
Sbjct: 68 ALLIREILPVIKFEELTNSEEELPENCAVCLYEFEGEQEIRWLRNCRHIFHRSCLDRWMD 127
Query: 202 HGQCTCPLCRAPLFP 246
H Q TCPLCR P P
Sbjct: 128 HDQKTCPLCRTPFVP 142
>gb|EMJ10904.1| hypothetical protein PRUPE_ppa012459mg [Prunus persica]
Length = 168
Score = 93.6 bits (231), Expect = 2e-17
Identities = 41/69 (59%), Positives = 51/69 (73%)
Frame = +1
Query: 31 AEVIEEASPATRFEQLPEAAESCCAVCLYEFEPEDEVRRMSDCRHIFHRHCVDRWLEHGQ 210
A +I E P +F L + ESC AVCLYEFE EDE+RR+++CRHIFH+ CVDRW+ + Q
Sbjct: 64 AVLIREILPVVKFSDLVDPPESC-AVCLYEFESEDEIRRLTNCRHIFHKGCVDRWVGYDQ 122
Query: 211 CTCPLCRAP 237
TCPLCR P
Sbjct: 123 KTCPLCRTP 131
>gb|EXB37315.1| RING-H2 zinc finger protein RHA1a [Morus notabilis]
Length = 170
Score = 93.2 bits (230), Expect = 3e-17
Identities = 41/72 (56%), Positives = 53/72 (73%)
Frame = +1
Query: 25 VLAEVIEEASPATRFEQLPEAAESCCAVCLYEFEPEDEVRRMSDCRHIFHRHCVDRWLEH 204
V + +I E P +F +L + ESC AVCLYEFE EDE+RR+++C HIFHR C+DRW+ +
Sbjct: 68 VSSVLIRELLPVVKFSELVDPPESC-AVCLYEFESEDEIRRLTNCCHIFHRSCLDRWMGY 126
Query: 205 GQCTCPLCRAPL 240
Q TCPLCR PL
Sbjct: 127 DQKTCPLCRTPL 138
>ref|XP_002304513.2| hypothetical protein POPTR_0003s13080g [Populus trichocarpa]
gi|550343069|gb|EEE79492.2| hypothetical protein
POPTR_0003s13080g [Populus trichocarpa]
Length = 183
Score = 93.2 bits (230), Expect = 3e-17
Identities = 38/74 (51%), Positives = 52/74 (70%)
Frame = +1
Query: 25 VLAEVIEEASPATRFEQLPEAAESCCAVCLYEFEPEDEVRRMSDCRHIFHRHCVDRWLEH 204
V A +I E P +F +L + + CAVCLYEFE DE+RR+++CRHIFH+ C+DRW+ +
Sbjct: 69 VSALLIREILPVVKFSELVDPSADSCAVCLYEFEESDEIRRLANCRHIFHKCCLDRWMGY 128
Query: 205 GQCTCPLCRAPLFP 246
Q TCPLCR + P
Sbjct: 129 DQITCPLCRTHVIP 142